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Analysis ID
  ID Tissue Title Exp. Method Assoc. Method Samples PubMed ID
1 Lymphoblastoid Transcriptome genetics using second generation sequencing in a Caucasian population. RNA-seq Spearman Rank corr. 60 20220756
2 Liver Mapping the genetic architecture of gene expression in human liver Array Kruskal-Wallis 427 18462017
3 Brain Cerebellum Abundant quantitative trait Loci exist for DNA methylation and gene expression in human brain Array Linear Regr. 143 20485568
4 Brain Frontal Cortex Abundant quantitative trait Loci exist for DNA methylation and gene expression in human brain Array Linear Regr. 143 20485568
5 Brain Temporal Cortex Abundant quantitative trait Loci exist for DNA methylation and gene expression in human brain Array Linear Regr. 144 20485568
6 Brain Pons Abundant quantitative trait Loci exist for DNA methylation and gene expression in human brain Array Linear Regr. 142 20485568
7 Lymphoblastoid Population genomics of human gene expression Array Linear Regr 210 17873874
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Phenotype Traits

* Links to GWAS phenotypes are based on GWAS genes and eQTL expressed genes.
 

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Analysis Tissue Lymphoblastoid
Expression Method RNA-seq
Assoc. Method Spearman Rank corr.
Samples 60
Pubmed ID 20220756
Analysis Tissue Liver
Expression Method Array
Assoc. Method Kruskal-Wallis
Samples 427
Pubmed ID 18462017
Analysis Tissue Brain Cerebellum
Expression Method Array
Assoc. Method Linear Regr.
Samples 143
Pubmed ID 20485568
Analysis Tissue Brain Frontal Cortex
Expression Method Array
Assoc. Method Linear Regr.
Samples 143
Pubmed ID 20485568
Analysis Tissue Brain Temporal Cortex
Expression Method Array
Assoc. Method Linear Regr.
Samples 144
Pubmed ID 20485568
Analysis Tissue Brain Pons
Expression Method Array
Assoc. Method Linear Regr.
Samples 142
Pubmed ID 20485568
Analysis Tissue Lymphoblastoid
Expression Method Array
Assoc. Method Linear Regr
Samples 210
Pubmed ID 17873874
Gene SLC2A9
Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations.
SNP rs rs734553
Pubmed ID 19503597
P-Value 1 X 10-41
Trait Serum uric acid
Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations.
SNP rs rs734553
Pubmed ID 19503597
P-Value 1 X 10-192
Trait Serum uric acid
SLC2A9 is a newly identified urate transporter influencing serum urate concentration, urate excretion and gout.
SNP rs rs737267
Pubmed ID 18327257
P-Value 3 X 10-09
Trait Serum urate
The GLUT9 gene is associated with serum uric acid levels in Sardinia and Chianti cohorts.
SNP rs rs6855911
Pubmed ID 17997608
P-Value 2 X 10-16
Trait Serum urate
Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.
SNP rs rs7442295
Pubmed ID 18179892
P-Value 2 X 10-15
Trait Serum urate
SLC2A9 influences uric acid concentrations with pronounced sex-specific effects.
SNP rs rs7442295
Pubmed ID 18327256
P-Value 3 X 10-70
Trait Serum urate
Genome-wide association study of biochemical traits in Korcula Island, Croatia.
SNP rs rs13129697
Pubmed ID 19260141
P-Value 1 X 10-09
Trait Biochemical measures
Association of a common nonsynonymous variant in GLUT9 with serum uric acid levels in old order amish.
SNP rs rs16890979
Pubmed ID 18759275
P-Value 1 X 10-11
Trait Serum uric acid
Association of three genetic loci with uric acid concentration and risk of gout: a genome-wide association study.
SNP rs rs16890979
Pubmed ID 18834626
P-Value 7 X 10-168
Trait Serum urate
Gene ARHGAP26
Association of a common nonsynonymous variant in GLUT9 with serum uric acid levels in old order amish.
SNP rs rs3776331
Pubmed ID 18759275
P-Value 8 X 10-06
Trait Serum uric acid
Gene GGT1
Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes.
SNP rs rs4820599
Pubmed ID 18940312
P-Value 4 X 10-11
Trait Plasma levels of liver enzymes
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs5751901
Pubmed ID 18464913
P-Value 2 X 10-07
Trait Protein quantitative trait loci
Gene IL17REL
Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL).
SNP rs rs5771069
Pubmed ID 20228798
P-Value 4 X 10-08
Trait Ulcerative colitis
Gene FGFR1OP
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs2301436
Pubmed ID 18587394
P-Value 1 X 10-12
Trait Crohn's disease
Fucosyltransferase 2(FUT2) Non-Secretor Status is associated with Crohn's Disease
SNP rs rs2301436
Pubmed ID 20570966
P-Value 6 X 10-08
Trait Crohn's disease
Gene ADAM19
Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.
SNP rs rs2277027
Pubmed ID 20010835
P-Value 1 X 10-10
Trait Pulmonary function
Gene CYP19A1
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs2305707
Pubmed ID 20189936
P-Value 7 X 10-07
Trait Height
Gene CRNN
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs908922
Pubmed ID 19896111
P-Value 4 X 10-06
Trait Hair morphology
Gene CNOT1
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs37062
Pubmed ID 19305408
P-Value 3 X 10-25
Trait QT interval
Several common variants modulate heart rate, PR interval and QRS duration.
SNP rs rs37062
Pubmed ID 20062063
P-Value 1 X 10-06
Trait Electrocardiographic traits
Common variants at ten loci modulate the QT interval duration in the QTSCD Study.
SNP rs rs7188697
Pubmed ID 19305409
P-Value 7 X 10-25
Trait QT interval
Gene TRIM24
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs1874326
Pubmed ID 19197348
P-Value 9 X 10-06
Trait Quantitative traits
Gene FGG
A genome-wide association study for late-onset Alzheimer's disease using DNA pooling.
SNP rs rs727153
Pubmed ID 18823527
P-Value 3 X 10-06
Trait Alzheimer's disease
Gene KIAA1217
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs2484873
Pubmed ID 20125193
P-Value 4 X 10-07
Trait Cognitive test performance
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs11013962
Pubmed ID 20585627
P-Value 3 X 10-07
Trait Common traits (Other)
Gene ODZ2
Genome-wide association study of conduct disorder symptomatology
SNP rs rs2122554
Pubmed ID 20585324
P-Value 3 X 10-06
Trait Conduct disorder (symptom count)
Gene BARD1
Common variations in BARD1 influence susceptibility to high-risk neuroblastoma.
SNP rs rs6435862
Pubmed ID 19412175
P-Value 9 X 10-18
Trait Neuroblastoma (high-risk)
Gene HNF1B
Two variants on chromosome 17 confer prostate cancer risk, and the one in TCF2 protects against type 2 diabetes.
SNP rs rs4430796
Pubmed ID 17603485
P-Value 1 X 10-11
Trait Prostate cancer
Multiple loci identified in a genome-wide association study of prostate cancer.
SNP rs rs4430796
Pubmed ID 18264096
P-Value 1 X 10-09
Trait Prostate cancer
Genome-wide association and replication studies identify four variants associated with prostate cancer susceptibility.
SNP rs rs4430796
Pubmed ID 19767754
P-Value 8 X 10-06
Trait Prostate cancer
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs4430796
Pubmed ID 20581827
P-Value 2 X 10-06
Trait Type 2 diabetes
Multiple newly identified loci associated with prostate cancer susceptibility.
SNP rs rs7501939
Pubmed ID 18264097
P-Value 9 X 10-12
Trait Prostate cancer
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs7501939
Pubmed ID 19767753
P-Value 3 X 10-18
Trait Prostate cancer
Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population
SNP rs rs7501939
Pubmed ID 20676098
P-Value 1 X 10-12
Trait Prostate cancer
Gene NOS1AP
Genetic variation in SCN10A influences cardiac conduction.
SNP rs rs1415259
Pubmed ID 20062061
P-Value 7 X 10-10
Trait Electrocardiographic traits
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs2880058
Pubmed ID 20031603
P-Value 2 X 10-10
Trait QT interval
Common variants at ten loci modulate the QT interval duration in the QTSCD Study.
SNP rs rs4657178
Pubmed ID 19305409
P-Value 7 X 10-33
Trait QT interval
A common genetic variant in the NOS1 regulator NOS1AP modulates cardiac repolarization.
SNP rs rs10494366
Pubmed ID 16648850
P-Value 1 X 10-10
Trait QT interval
Several common variants modulate heart rate, PR interval and QRS duration.
SNP rs rs10494366
Pubmed ID 20062063
P-Value 5 X 10-22
Trait Electrocardiographic traits
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs12029454
Pubmed ID 19305408
P-Value 3 X 10-45
Trait QT interval
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs12143842
Pubmed ID 19305408
P-Value 2 X 10-78
Trait QT interval
Common variants at ten loci modulate the QT interval duration in the QTSCD Study.
SNP rs rs12143842
Pubmed ID 19305409
P-Value 2 X 10-78
Trait QT interval
Common genetic variation near the phospholamban gene is associated with cardiac repolarisation: meta-analysis of three genome-wide association studies.
SNP rs rs12143842
Pubmed ID 19587794
P-Value 1 X 10-83
Trait QT interval
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs16857031
Pubmed ID 19305408
P-Value 1 X 10-34
Trait QT interval
Gene AUTS2
A genome-wide association study of breast and prostate cancer in the NHLBI's Framingham Heart Study.
SNP rs rs10263639
Pubmed ID 17903305
P-Value 3 X 10-06
Trait Breast cancer
Gene C1orf159
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
SNP rs rs3934834
Pubmed ID 19851299
P-Value 6 X 10-07
Trait Body mass index
Gene TGFBR3
Genome-wide association and follow-up replication studies identified ADAMTS18 and TGFBR3 as bone mass candidate genes in different ethnic groups.
SNP rs rs17131547
Pubmed ID 19249006
P-Value 1 X 10-06
Trait Bone mineral density
Gene GSDMB
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs2290400
Pubmed ID 19430480
P-Value 6 X 10-13
Trait Type 1 diabetes
Genome-wide association identifies multiple ulcerative colitis susceptibility loci
SNP rs rs2305480
Pubmed ID 20228799
P-Value 3 X 10-08
Trait Ulcerative colitis
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs2872507
Pubmed ID 18587394
P-Value 5 X 10-09
Trait Crohn's disease
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs2872507
Pubmed ID 20453842
P-Value 9 X 10-07
Trait Rheumatoid arthritis
Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma.
SNP rs rs7216389
Pubmed ID 17611496
P-Value 9 X 10-11
Trait Asthma
Genome-wide association identifies multiple ulcerative colitis susceptibility loci
SNP rs rs8067378
Pubmed ID 20228799
P-Value 1 X 10-07
Trait Ulcerative colitis
Gene NEK6
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs2807580
Pubmed ID 20125193
P-Value 3 X 10-06
Trait Cognitive test performance
Gene VAMP1
Genome-wide association with bone mass and geometry in the Framingham Heart Study.
SNP rs rs10492096
Pubmed ID 17903296
P-Value 3 X 10-06
Trait Hip geometry
Gene ZFHX3
Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry.
SNP rs rs2106261
Pubmed ID 19597492
P-Value 2 X 10-15
Trait Atrial fibrillation
A sequence variant in ZFHX3 on 16q22 associates with atrial fibrillation and ischemic stroke.
SNP rs rs7193343
Pubmed ID 19597491
P-Value 1 X 10-10
Trait Atrial fibrillation
A genome-wide association study identifies novel and functionally related susceptibility Loci for Kawasaki disease.
SNP rs rs7199343
Pubmed ID 19132087
P-Value 2 X 10-06
Trait Kawasaki disease
Gene ZNF259
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs964184
Pubmed ID 19060906
P-Value 1 X 10-12
Trait HDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs964184
Pubmed ID 19060906
P-Value 4 X 10-62
Trait Triglycerides
Excess of rare variants in genes identified by genome-wide association study of hypertriglyceridemia
SNP rs rs964184
Pubmed ID 20657596
P-Value 5 X 10-24
Trait Hypertriglyceridemia
Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.
SNP rs rs6589566
Pubmed ID 18179892
P-Value 3 X 10-11
Trait LDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs12286037
Pubmed ID 18193043
P-Value 1 X 10-26
Trait Triglycerides
Genome-wide association study of Lp-PLA(2) activity and mass in the Framingham Heart Study
SNP rs rs12286037
Pubmed ID 20442857
P-Value 4 X 10-08
Trait Lipoprotein-associated phospholipase A2 activity and mass
Gene ATP5G2
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs11170631
Pubmed ID 20189936
P-Value 9 X 10-07
Trait Height
Gene CADM3
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs1474747
Pubmed ID 17903293
P-Value 3 X 10-06
Trait Select biomarker traits
Gene MOBP
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs816488
Pubmed ID 19734545
P-Value 4 X 10-06
Trait Cognitive performance
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs864643
Pubmed ID 18839057
P-Value 1 X 10-08
Trait Attention deficit hyperactivity disorder
Gene NUP153
Many sequence variants affecting diversity of adult human height.
SNP rs rs12199222
Pubmed ID 18391951
P-Value 7 X 10-07
Trait Height
Gene CRY2
New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk.
SNP rs rs11605924
Pubmed ID 20081858
P-Value 1 X 10-14
Trait Fasting glucose-related traits
Gene ZNRD1
Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02).
SNP rs rs8321
Pubmed ID 19115949
P-Value 5 X 10-07
Trait AIDS progression
Gene CASR
Genome-wide meta-analysis for serum calcium identifies significantly associated SNPs near the calcium-sensing receptor (CASR)gene
SNP rs rs1801725
Pubmed ID 20661308
P-Value 6 X 10-37
Trait Serum calcium
Gene PPM1K
Does parental expressed emotion moderate genetic effects in ADHD? An exploration using a genome wide association scan.
SNP rs rs893971
Pubmed ID 18846501
P-Value 7 X 10-06
Trait Conduct disorder (interaction)
Gene SCG3
Genome-wide association study of asthma identifies RAD50-IL13 and HLA-DR/DQ regions.
SNP rs rs17525472
Pubmed ID 20159242
P-Value 2 X 10-06
Trait Asthma
Gene CDK6
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs445
Pubmed ID 20139978
P-Value 2 X 10-08
Trait Hematological and biochemical traits
Common variants at CD40 and other loci confer risk of rheumatoid arthritis.
SNP rs rs42041
Pubmed ID 18794853
P-Value 4 X 10-06
Trait Rheumatoid arthritis
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs2040494
Pubmed ID 18391950
P-Value 4 X 10-07
Trait Height
Many sequence variants affecting diversity of adult human height.
SNP rs rs2282978
Pubmed ID 18391951
P-Value 1 X 10-08
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs2282978
Pubmed ID 18391952
P-Value 8 X 10-23
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs2282978
Pubmed ID 19343178
P-Value 1 X 10-08
Trait Height
Gene TGM5
Deciphering the impact of common genetic variation on lung cancer risk: a genome-wide association study.
SNP rs rs748404
Pubmed ID 19654303
P-Value 1 X 10-06
Trait Lung cancer
Gene POU3F3
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs12615966
Pubmed ID 20686608
P-Value 7 X 10-06
Trait Pancreatic cancer
Gene ZGPAT
Loci on 20q13 and 21q22 are associated with pediatric-onset inflammatory bowel disease.
SNP rs rs2315008
Pubmed ID 18758464
P-Value 9 X 10-15
Trait Inflammatory bowel disease
Gene IL12RB2
Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behcet's disease
SNP rs rs924080
Pubmed ID 20622878
P-Value 7 X 10-09
Trait Behcet's disease
Genome-wide association studies identify IL23R-IL12RB2 and IL10 as Behcet's disease susceptibility loci
SNP rs rs1495965
Pubmed ID 20622879
P-Value 2 X 10-11
Trait Behcet's disease
Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.
SNP rs rs3790567
Pubmed ID 19458352
P-Value 3 X 10-11
Trait Primary biliary cirrhosis
Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis
SNP rs rs3790567
Pubmed ID 20639880
P-Value 8 X 10-12
Trait Primary biliary cirrhosis
Gene BAK1
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs210135
Pubmed ID 19820697
P-Value 4 X 10-10
Trait Hematological parameters
A genome-wide association study of testicular germ cell tumor.
SNP rs rs210138
Pubmed ID 19483681
P-Value 1 X 10-13
Trait Testicular germ cell tumor
Gene LOC389203
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs874040
Pubmed ID 20453842
P-Value 1 X 10-16
Trait Rheumatoid arthritis
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs10517086
Pubmed ID 19430480
P-Value 5 X 10-10
Trait Type 1 diabetes
Gene SMG6
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
SNP rs rs10852932
Pubmed ID 19584346
P-Value 2 X 10-11
Trait Aortic root size
Gene CNTNAP4
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs13330107
Pubmed ID 18821565
P-Value 9 X 10-06
Trait Inattentive symptoms
Gene TNIP1
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs10036748
Pubmed ID 19838193
P-Value 2 X 10-09
Trait Systemic lupus erythematosus
Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways.
SNP rs rs17728338
Pubmed ID 19169254
P-Value 1 X 10-20
Trait Psoriasis
Gene BNC2
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
SNP rs rs1927702
Pubmed ID 19851299
P-Value 6 X 10-06
Trait Body mass index
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs2153271
Pubmed ID 20585627
P-Value 4 X 10-10
Trait Freckling
A genome-wide association study identifies a new ovarian cancer susceptibility locus on 9p22.2.
SNP rs rs3814113
Pubmed ID 19648919
P-Value 5 X 10-19
Trait Ovarian cancer
Gene LRRK2
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs11175593
Pubmed ID 18587394
P-Value 3 X 10-10
Trait Crohn's disease
Gene ELMOD1
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs10431058
Pubmed ID 20585627
P-Value 8 X 10-07
Trait Common traits (Other)
Gene NFIA
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs472913
Pubmed ID 19416921
P-Value 2 X 10-07
Trait Bipolar disorder
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs6691768
Pubmed ID 20190752
P-Value 1 X 10-07
Trait Celiac disease
Gene PRKAR2B
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs13224682
Pubmed ID 20195266
P-Value 6 X 10-08
Trait Response to antipsychotic treatment
Gene TCL6
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs8015016
Pubmed ID 20031603
P-Value 5 X 10-07
Trait QT interval
Gene NUTF2
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs2271293
Pubmed ID 19060906
P-Value 9 X 10-13
Trait HDL cholesterol
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs2271293
Pubmed ID 19060911
P-Value 8 X 10-16
Trait HDL cholesterol
Gene F12
Common Variants of Large Effect in F12, KNG1, and HRG Are Associated with Activated Partial Thromboplastin Time
SNP rs rs2731672
Pubmed ID 20303064
P-Value 2 X 10-30
Trait Activated partial thromboplastin time
Gene LOC642340
Loci at chromosomes 13, 19 and 20 influence age at natural menopause.
SNP rs rs11889862
Pubmed ID 19448619
P-Value 2 X 10-06
Trait Menopause (age at onset)
Gene WDR12
Genome-wide association of early-onset myocardial infarction with single nucleotide polymorphisms and copy number variants.
SNP rs rs6725887
Pubmed ID 19198609
P-Value 1 X 10-08
Trait Myocardial infarction (early onset)
Gene CCR4
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs13314993
Pubmed ID 20190752
P-Value 3 X 10-09
Trait Celiac disease
Gene ST8SIA3
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs1120787
Pubmed ID 20041166
P-Value 7 X 10-06
Trait HIV-1 control
Gene PRDX5
Genome-wide association study in alopecia areata implicates both innate and adaptive immunity
SNP rs rs694739
Pubmed ID 20596022
P-Value 4 X 10-07
Trait Alopecia areata
Gene NOD2
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs2066847
Pubmed ID 18587394
P-Value 3 X 10-24
Trait Crohn's disease
Fucosyltransferase 2(FUT2) Non-Secretor Status is associated with Crohn's Disease
SNP rs rs2066847
Pubmed ID 20570966
P-Value 2 X 10-15
Trait Crohn's disease
A genome-wide association study identifies IL23R as an inflammatory bowel disease gene.
SNP rs rs2076756
Pubmed ID 17068223
P-Value 5 X 10-10
Trait Inflammatory bowel disease
Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis.
SNP rs rs2076756
Pubmed ID 17435756
P-Value 7 X 10-14
Trait Crohn's disease
Systematic association mapping identifies NELL1 as a novel IBD disease gene.
SNP rs rs2076756
Pubmed ID 17684544
P-Value 1 X 10-21
Trait Crohn's disease
Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4.
SNP rs rs5743289
Pubmed ID 17447842
P-Value 1 X 10-06
Trait Crohn's disease
Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci.
SNP rs rs5743289
Pubmed ID 17804789
P-Value 6 X 10-17
Trait Crohn's disease
Loci on 20q13 and 21q22 are associated with pediatric-onset inflammatory bowel disease.
SNP rs rs5743289
Pubmed ID 18758464
P-Value 4 X 10-10
Trait Inflammatory bowel disease
Genomewide association study of leprosy.
SNP rs rs9302752
Pubmed ID 20018961
P-Value 4 X 10-40
Trait Leprosy
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs17221417
Pubmed ID 17554300
P-Value 4 X 10-11
Trait Crohn's disease
Gene GNPDA2
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs10938397
Pubmed ID 19079261
P-Value 3 X 10-16
Trait Body mass index
Gene SLAMF6
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs16832015
Pubmed ID 19734545
P-Value 2 X 10-06
Trait Cognitive performance
Gene KIAA0774
Does parental expressed emotion moderate genetic effects in ADHD? An exploration using a genome wide association scan.
SNP rs rs1161463
Pubmed ID 18846501
P-Value 2 X 10-06
Trait Attention deficit hyperactivity disorder symptoms (interaction)
Gene C3orf21
Genome-wide association scan of the time to onset of attention deficit hyperactivity disorder.
SNP rs rs3892715
Pubmed ID 18937294
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder (time to onset)
Gene PFKP
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs729397
Pubmed ID 20339536
P-Value 8 X 10-06
Trait Response to statin therapy
Gene C21orf33
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs762421
Pubmed ID 18587394
P-Value 1 X 10-09
Trait Crohn's disease
Gene BANP
Loci at chromosomes 13, 19 and 20 influence age at natural menopause.
SNP rs rs4843747
Pubmed ID 19448619
P-Value 2 X 10-07
Trait Menopause (age at onset)
Common genetic variants near the Brittle Cornea Syndrome locus ZNF469 influence the blinding disease risk factor central corneal thickness
SNP rs rs12447690
Pubmed ID 20485516
P-Value 9 X 10-11
Trait Central corneal thickness
Gene MTCH2
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs10838738
Pubmed ID 19079261
P-Value 5 X 10-09
Trait Body mass index
Gene RPUSD4
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs563519
Pubmed ID 20445134
P-Value 3 X 10-06
Trait Heart failure
Gene ALDH6A1
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs2239557
Pubmed ID 20585627
P-Value 3 X 10-07
Trait Common traits (Other)
Gene MTMR7
Genome-wide association study of conduct disorder symptomatology
SNP rs rs2720508
Pubmed ID 20585324
P-Value 7 X 10-06
Trait Conduct disorder (case status)
Gene SELP
Large-scale genomic studies reveal central role of ABO in sP-selectin and sICAM-1 levels.
SNP rs rs6136
Pubmed ID 20167578
P-Value 4 X 10-61
Trait Soluble levels of adhesion molecules
Large-scale genomic studies reveal central role of ABO in sP-selectin and sICAM-1 levels.
SNP rs rs2235302
Pubmed ID 20167578
P-Value 4 X 10-16
Trait Soluble levels of adhesion molecules
Gene ITGAM
Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci.
SNP rs rs9888739
Pubmed ID 18204446
P-Value 2 X 10-23
Trait Systemic lupus erythematosus
Genetic variants near TNFAIP3 on 6q23 are associated with systemic lupus erythematosus.
SNP rs rs11150610
Pubmed ID 19165918
P-Value 2 X 10-06
Trait Systemic lupus erythematosus
Gene C15orf38
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs7178909
Pubmed ID 20585627
P-Value 5 X 10-07
Trait Common traits (Other)
Gene GK5
New loci associated with kidney function and chronic kidney disease
SNP rs rs347685
Pubmed ID 20383146
P-Value 3 X 10-11
Trait Chronic kidney disease
Gene BTBD9
A genetic risk factor for periodic limb movements in sleep.
SNP rs rs3923809
Pubmed ID 17634447
P-Value 1 X 10-17
Trait Restless legs syndrome
Genome-wide association study of restless legs syndrome identifies common variants in three genomic regions.
SNP rs rs9296249
Pubmed ID 17637780
P-Value 4 X 10-18
Trait Restless legs syndrome
Gene MST1
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs3197999
Pubmed ID 18587394
P-Value 1 X 10-12
Trait Crohn's disease
Genome-wide association identifies multiple ulcerative colitis susceptibility loci
SNP rs rs3197999
Pubmed ID 20228799
P-Value 4 X 10-09
Trait Ulcerative colitis
Gene MTAP
Genome-wide association study identifies variants at 9p21 and 22q13 associated with development of cutaneous nevi.
SNP rs rs4636294
Pubmed ID 19578365
P-Value 3 X 10-15
Trait Cutaneous nevi
Genome-wide association study identifies three loci associated with melanoma risk.
SNP rs rs7023329
Pubmed ID 19578364
P-Value 4 X 10-07
Trait Melanoma
Gene SLC39A11
Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
SNP rs rs8066857
Pubmed ID 19451621
P-Value 8 X 10-06
Trait Amyotrophic lateral sclerosis
Gene SLC45A2
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs28777
Pubmed ID 18483556
P-Value 1 X 10-17
Trait Black vs. blond hair color
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs28777
Pubmed ID 18483556
P-Value 9 X 10-14
Trait Black vs. red hair color
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs35391
Pubmed ID 19340012
P-Value 3 X 10-10
Trait Tanning
A genomewide association study of skin pigmentation in a South Asian population.
SNP rs rs16891982
Pubmed ID 17999355
P-Value 3 X 10-11
Trait Skin pigmentation
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs16891982
Pubmed ID 20585627
P-Value 4 X 10-20
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs16891982
Pubmed ID 20585627
P-Value 4 X 10-20
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs16891982
Pubmed ID 20585627
P-Value 1 X 10-12
Trait Eye color
Gene SH2B3
Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction.
SNP rs rs3184504
Pubmed ID 19198610
P-Value 7 X 10-19
Trait Plasma eosinophil count
Genome-wide association study of blood pressure and hypertension.
SNP rs rs3184504
Pubmed ID 19430479
P-Value 5 X 10-09
Trait Systolic blood pressure
Genome-wide association study of blood pressure and hypertension.
SNP rs rs3184504
Pubmed ID 19430479
P-Value 3 X 10-14
Trait Diastolic blood pressure
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs3184504
Pubmed ID 19430480
P-Value 3 X 10-27
Trait Type 1 diabetes
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs3184504
Pubmed ID 20453842
P-Value 6 X 10-06
Trait Rheumatoid arthritis
Gene MBL2
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs583012
Pubmed ID 17903293
P-Value 2 X 10-06
Trait Select biomarker traits
Several common variants modulate heart rate, PR interval and QRS duration.
SNP rs rs1733724
Pubmed ID 20062063
P-Value 7 X 10-08
Trait Electrocardiographic traits
Gene WNK1
Genomewide association studies of stroke.
SNP rs rs12425791
Pubmed ID 19369658
P-Value 1 X 10-09
Trait Stroke
Gene CALCOCO1
Genome-wide association study of panic disorder in the Japanese population.
SNP rs rs941184
Pubmed ID 19165232
P-Value 3 X 10-07
Trait Panic disorder
Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2
SNP rs rs2120991
Pubmed ID 20460270
P-Value 9 X 10-06
Trait Biliary atresia
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs7969151
Pubmed ID 19340012
P-Value 2 X 10-06
Trait Tanning
Gene LPA
Genome-wide association study of plasma Lp(a)levels Identifies multiple genes on chromosome 6q
SNP rs rs6919346
Pubmed ID 19124843
P-Value 4 X 10-11
Trait Plasma Lp (a) levels
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs7770628
Pubmed ID 18464913
P-Value 4 X 10-10
Trait Protein quantitative trait loci
Gene CACNB2
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs7069923
Pubmed ID 19197348
P-Value 1 X 10-06
Trait Quantitative traits
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs7076247
Pubmed ID 18464913
P-Value 6 X 10-06
Trait Protein quantitative trait loci
Genome-wide association study of blood pressure and hypertension.
SNP rs rs11014166
Pubmed ID 19430479
P-Value 6 X 10-08
Trait Hypertension
Genome-wide association study of blood pressure and hypertension.
SNP rs rs11014166
Pubmed ID 19430479
P-Value 7 X 10-07
Trait Systolic blood pressure
Genome-wide association study of blood pressure and hypertension.
SNP rs rs11014166
Pubmed ID 19430479
P-Value 1 X 10-08
Trait Diastolic blood pressure
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs17661538
Pubmed ID 20195266
P-Value 1 X 10-06
Trait Response to antipsychotic treatment
Gene FBXO7
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs9609565
Pubmed ID 19820697
P-Value 4 X 10-10
Trait Hematological parameters
Gene ZNF326
Genome-Wide Pharmacogenetics of Antidepressant Response in the GENDEP Project
SNP rs rs2136093
Pubmed ID 20360315
P-Value 4 X 10-07
Trait Response to antidepressants
Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study.
SNP rs rs2390582
Pubmed ID 17903303
P-Value 1 X 10-06
Trait Coronary artery calcification
Gene FCRL5
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs6427356
Pubmed ID 18951430
P-Value 8 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene MAP3K9
Genome-wide association study of alcohol dependence.
SNP rs rs36563
Pubmed ID 19581569
P-Value 5 X 10-06
Trait Alcohol dependence
Gene WDR60
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs2730245
Pubmed ID 18391950
P-Value 3 X 10-07
Trait Height
Gene TNPO3
Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
SNP rs rs10488631
Pubmed ID 18204098
P-Value 2 X 10-11
Trait Systemic lupus erythematosus
Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.
SNP rs rs10488631
Pubmed ID 19458352
P-Value 2 X 10-07
Trait Primary biliary cirrhosis
Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locus
SNP rs rs10488631
Pubmed ID 20383147
P-Value 2 X 10-13
Trait Systemic sclerosis
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs10488631
Pubmed ID 20453842
P-Value 4 X 10-11
Trait Rheumatoid arthritis
Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis
SNP rs rs10488631
Pubmed ID 20639880
P-Value 3 X 10-10
Trait Primary biliary cirrhosis
Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci.
SNP rs rs12537284
Pubmed ID 18204446
P-Value 4 X 10-19
Trait Systemic lupus erythematosus
Gene APOE
Loci related to metabolic-syndrome pathways including LEPR,HNF1A, IL6R, and GCKR associate with plasma C-reactive protein: the Women's Genome Health Study.
SNP rs rs769449
Pubmed ID 18439548
P-Value 9 X 10-21
Trait C-reactive protein
Gene FIGN
Genome-wide association study of antipsychotic-induced parkinsonism severity among schizophrenia patients.
SNP rs rs12476047
Pubmed ID 19680635
P-Value 3 X 10-06
Trait Response to antipsychotic treatment
Gene LRRC7
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs4147141
Pubmed ID 18821565
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs4147141
Pubmed ID 18821565
P-Value 8 X 10-06
Trait Inattentive symptoms
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs4650135
Pubmed ID 18821565
P-Value 5 X 10-06
Trait Inattentive symptoms
Gene MYB
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs4895441
Pubmed ID 19862010
P-Value 7 X 10-86
Trait Mean corpuscular volume
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs4895441
Pubmed ID 20139978
P-Value 2 X 10-09
Trait Hematological and biochemical traits
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs7775698
Pubmed ID 19853236
P-Value 8 X 10-18
Trait Hematology traits
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs7775698
Pubmed ID 19853236
P-Value 5 X 10-13
Trait Hematology traits
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs7775698
Pubmed ID 20139978
P-Value 3 X 10-56
Trait Hematological and biochemical traits
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs7775698
Pubmed ID 20139978
P-Value 3 X 10-66
Trait Hematological and biochemical traits
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs7776054
Pubmed ID 19862010
P-Value 7 X 10-69
Trait Mean corpuscular hemoglobin
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9373124
Pubmed ID 19862010
P-Value 7 X 10-14
Trait Other erythrocyte phenotypes
A genome-wide association identified the common genetic variants influence disease severity in beta(0)-thalassemia/hemoglobin E.
SNP rs rs9376092
Pubmed ID 19924444
P-Value 2 X 10-11
Trait Beta thalassemia/hemoglobin E disease
A QTL influencing F cell production maps to a gene encoding a zinc-finger protein on chromosome 2p15.
SNP rs rs9399137
Pubmed ID 17767159
P-Value 3 X 10-36
Trait F-cell distribution
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs9399137
Pubmed ID 19853236
P-Value 1 X 10-09
Trait Hematology traits
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs9402686
Pubmed ID 19820697
P-Value 7 X 10-42
Trait Hematological parameters
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9483788
Pubmed ID 19862010
P-Value 1 X 10-47
Trait Other erythrocyte phenotypes
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9483788
Pubmed ID 19862010
P-Value 3 X 10-15
Trait Hematocrit
Gene HMGCR
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs3846662
Pubmed ID 19060911
P-Value 3 X 10-19
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs3846662
Pubmed ID 19060911
P-Value 2 X 10-11
Trait LDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs3846663
Pubmed ID 19060906
P-Value 8 X 10-12
Trait LDL cholesterol
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs3846663
Pubmed ID 19197348
P-Value 1 X 10-06
Trait Quantitative traits
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs3846663
Pubmed ID 19197348
P-Value 6 X 10-06
Trait Quantitative traits
Common SNPs in HMGCR in micronesians and whites associated with LDL-cholesterol levels affect alternative splicing of exon13.
SNP rs rs7703051
Pubmed ID 18802019
P-Value 1 X 10-08
Trait LDL cholesterol
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs12654264
Pubmed ID 18193044
P-Value 1 X 10-20
Trait LDL cholesterol
Gene FADS1
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
SNP rs rs174546
Pubmed ID 19060910
P-Value 1 X 10-07
Trait LDL cholesterol
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs174546
Pubmed ID 20694148
P-Value 6 X 10-07
Trait Metabolic syndrome
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs174547
Pubmed ID 19060906
P-Value 2 X 10-12
Trait HDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs174547
Pubmed ID 19060906
P-Value 2 X 10-14
Trait Triglycerides
A genome-wide perspective of genetic variation in human metabolism.
SNP rs rs174547
Pubmed ID 20037589
P-Value 7 X 10-179
Trait Serum metabolites
Genome-wide association analysis identifies multiple loci related with resting heart rate
SNP rs rs174547
Pubmed ID 20639392
P-Value 2 X 10-09
Trait Resting heart rate
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.
SNP rs rs174548
Pubmed ID 19043545
P-Value 5 X 10-08
Trait Serum metabolites
New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk.
SNP rs rs174550
Pubmed ID 20081858
P-Value 2 X 10-15
Trait Fasting glucose-related traits
New genetic loci implicated in fasting glucose homeostasis and their impact on type 2 diabetes risk.
SNP rs rs174550
Pubmed ID 20081858
P-Value 5 X 10-13
Trait Fasting glucose-related traits
Gene IFRD1
Genomic Variation Associated with Mortality among Adults of European and African Ancestry with Heart Failure: The CHARGE Consortium
SNP rs rs17159640
Pubmed ID 20400778
P-Value 9 X 10-06
Trait Mortality among heart failure patients
Gene DNM1
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs2502731
Pubmed ID 18839057
P-Value 2 X 10-06
Trait Attention deficit hyperactivity disorder
Gene FOXK1
Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study.
SNP rs rs10488360
Pubmed ID 17903294
P-Value 7 X 10-06
Trait Factor VII
Gene IPO8
Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study.
SNP rs rs1463605
Pubmed ID 17903295
P-Value 7 X 10-08
Trait Aging traits
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs2046383
Pubmed ID 20445134
P-Value 3 X 10-06
Trait Heart failure
Gene PRDM16
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs6658356
Pubmed ID 20339536
P-Value 2 X 10-06
Trait Response to statin therapy
Gene STX17
Genome-wide association study in alopecia areata implicates both innate and adaptive immunity
SNP rs rs10760706
Pubmed ID 20596022
P-Value 4 X 10-07
Trait Alopecia areata
Gene ITM2A
Many sequence variants affecting diversity of adult human height.
SNP rs rs1474563
Pubmed ID 18391951
P-Value 3 X 10-06
Trait Height
Gene RYR2
Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study.
SNP rs rs2819770
Pubmed ID 17903301
P-Value 4 X 10-06
Trait Exercise treadmill test traits
Germline genomic variants associated with childhood acute lymphoblastic leukemia.
SNP rs rs7554607
Pubmed ID 19684603
P-Value 2 X 10-06
Trait Acute lymphoblastic leukemia (childhood)
Gene VPS41
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs11984145
Pubmed ID 19734545
P-Value 6 X 10-06
Trait Cognitive performance
Gene FBN2
Common body mass index-associated variants confer risk of extreme obesity.
SNP rs rs374748
Pubmed ID 19553259
P-Value 4 X 10-06
Trait Obesity (extreme)
Gene CCDC60
Genetic correlates of longevity and selected age-related phenotypes: a genome-wide association study in the Framingham Study.
SNP rs rs7137869
Pubmed ID 17903295
P-Value 6 X 10-07
Trait Aging traits
A genome-wide association study in 574 schizophrenia trios using DNA pooling.
SNP rs rs11064768
Pubmed ID 18332876
P-Value 1 X 10-06
Trait Schizophrenia
Gene C11orf73
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs6592284
Pubmed ID 19734545
P-Value 2 X 10-06
Trait Cognitive performance
Gene IRS1
Genomewide association analysis of coronary artery disease.
SNP rs rs2943634
Pubmed ID 17634449
P-Value 2 X 10-07
Trait Coronary heart disease
Genetic variant near IRS1 is associated with type 2 diabetes, insulin resistance and hyperinsulinemia.
SNP rs rs2943641
Pubmed ID 19734900
P-Value 9 X 10-12
Trait Type 2 diabetes and other traits
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs7578326
Pubmed ID 20581827
P-Value 5 X 10-20
Trait Type 2 diabetes
Gene DYNC1H1
Loci at chromosomes 13, 19 and 20 influence age at natural menopause.
SNP rs rs4906172
Pubmed ID 19448619
P-Value 3 X 10-06
Trait Menopause (age at onset)
Gene TASP1
Genome-wide association study reveals genetic risk underlying Parkinson's disease.
SNP rs rs1223271
Pubmed ID 19915575
P-Value 5 X 10-06
Trait Parkinson's disease
Gene LRP1B
Genome-wide association identifies ATOH7 as a major gene determining human optic disc size
SNP rs rs491391
Pubmed ID 20395239
P-Value 3 X 10-07
Trait Optic disc size (disc)
A genome screen of successful aging without cognitive decline identifies LRP1B by haplotype analysis.
SNP rs rs12474609
Pubmed ID 19367585
P-Value 6 X 10-09
Trait Aging
Gene DYRK1A
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs2835810
Pubmed ID 20694148
P-Value 6 X 10-06
Trait Metabolic syndrome
Gene MMRN1
Genome-wide association study reveals genetic risk underlying Parkinson's disease.
SNP rs rs6532197
Pubmed ID 19915575
P-Value 1 X 10-07
Trait Parkinson's disease
Gene CSK
Genome-wide association study identifies eight loci associated with blood pressure.
SNP rs rs1378942
Pubmed ID 19430483
P-Value 1 X 10-23
Trait Diastolic blood pressure
Gene CD97
Genomic Variation Associated with Mortality among Adults of European and African Ancestry with Heart Failure: The CHARGE Consortium
SNP rs rs4528684
Pubmed ID 20400778
P-Value 1 X 10-06
Trait Mortality among heart failure patients
Gene PDLIM5
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs12500426
Pubmed ID 19767753
P-Value 1 X 10-11
Trait Prostate cancer
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs17021918
Pubmed ID 19767753
P-Value 4 X 10-15
Trait Prostate cancer
Gene ARHGAP10
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs6845865
Pubmed ID 20031603
P-Value 7 X 10-07
Trait QT interval
Gene RBBP6
Voxelwise genome-wide association study (vGWAS).
SNP rs rs11643520
Pubmed ID 20171287
P-Value 6 X 10-07
Trait Brain structure
Gene COG5
A genome-wide association study identifies an osteoarthritis susceptibility locus on chromosome 7q22.
SNP rs rs3815148
Pubmed ID 20112360
P-Value 8 X 10-08
Trait Osteoarthritis
Gene SPRED2
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs934734
Pubmed ID 20453842
P-Value 5 X 10-10
Trait Rheumatoid arthritis
Gene PET112L
Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study.
SNP rs rs360929
Pubmed ID 17903297
P-Value 9 X 10-06
Trait Volumetric brain MRI
Gene MAP2K5
Genome-wide association study of restless legs syndrome identifies common variants in three genomic regions.
SNP rs rs12593813
Pubmed ID 17637780
P-Value 1 X 10-15
Trait Restless legs syndrome
Gene PAPSS2
Genome-Wide Association Study of Exercise Behavior in Dutch and American Adults.
SNP rs rs10887741
Pubmed ID 19727025
P-Value 4 X 10-06
Trait Exercise (leisure time)
Gene FAM43A
Genome-wide association scan of the time to onset of attention deficit hyperactivity disorder.
SNP rs rs3892715
Pubmed ID 18937294
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder (time to onset)
Gene CHD1L
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs4950322
Pubmed ID 18464913
P-Value 2 X 10-07
Trait Protein quantitative trait loci
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs4950322
Pubmed ID 18464913
P-Value 7 X 10-07
Trait Protein quantitative trait loci
Gene KCNJ6
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs2835810
Pubmed ID 20694148
P-Value 6 X 10-06
Trait Metabolic syndrome
Gene C16orf75
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs12928822
Pubmed ID 20190752
P-Value 3 X 10-08
Trait Celiac disease
Gene MON1B
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs13330107
Pubmed ID 18821565
P-Value 9 X 10-06
Trait Inattentive symptoms
Gene SGCD
Genome-wide association study of anthropometric traits in Korcula Island, Croatia.
SNP rs rs157350
Pubmed ID 19260139
P-Value 4 X 10-06
Trait Anthropometric traits
Genome-wide association study of anthropometric traits in Korcula Island, Croatia.
SNP rs rs157350
Pubmed ID 19260139
P-Value 6 X 10-06
Trait Anthropometric traits
Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
SNP rs rs4704970
Pubmed ID 19010793
P-Value 7 X 10-06
Trait Multiple sclerosis (age of onset)
Gene MYH9
Genome-wide association identifies ATOH7 as a major gene determining human optic disc size
SNP rs rs735854
Pubmed ID 20395239
P-Value 9 X 10-06
Trait Optic disc size (rim)
Gene EFTUD1
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs12324805
Pubmed ID 19079261
P-Value 7 X 10-06
Trait Body mass index
Gene GRK6
Common Variants of Large Effect in F12, KNG1, and HRG Are Associated with Activated Partial Thromboplastin Time
SNP rs rs2731672
Pubmed ID 20303064
P-Value 2 X 10-30
Trait Activated partial thromboplastin time
Gene NRXN1
A genome-wide association study of Cloninger's temperament scales: Implications for the evolutionary genetics of personality
SNP rs rs10176705
Pubmed ID 20691247
P-Value 9 X 10-06
Trait Personality dimensions
Gene C17orf53
New sequence variants associated with bone mineral density.
SNP rs rs227584
Pubmed ID 19079262
P-Value 9 X 10-07
Trait Bone mineral density (hip)
Gene ATP2A2
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs11065611
Pubmed ID 18464913
P-Value 1 X 10-07
Trait Protein quantitative trait loci
Gene CDH1
Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.
SNP rs rs9929218
Pubmed ID 19011631
P-Value 1 X 10-08
Trait Colorectal cancer
Gene TBC1D22A
Genome-wide association study of response to methylphenidate in 187 children with attention-deficit/hyperactivity disorder.
SNP rs rs9627183
Pubmed ID 18821564
P-Value 3 X 10-06
Trait Attention deficit hyperactivity disorder
Gene DUT
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs11637235
Pubmed ID 18464913
P-Value 3 X 10-06
Trait Protein quantitative trait loci
Gene SPATA8
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs4533251
Pubmed ID 18951430
P-Value 4 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene CDH13
Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness
SNP rs rs3096277
Pubmed ID 17903302
P-Value 1 X 10-09
Trait Blood pressure
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs3784962
Pubmed ID 20125193
P-Value 3 X 10-06
Trait Cognitive test performance
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs4082514
Pubmed ID 19734545
P-Value 3 X 10-06
Trait Cognitive performance
Genome-wide association with bone mass and geometry in the Framingham Heart Study.
SNP rs rs4087296
Pubmed ID 17903296
P-Value 3 X 10-07
Trait Bone mineral density
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs4783227
Pubmed ID 20195266
P-Value 4 X 10-07
Trait Response to antipsychotic treatment
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs6563943
Pubmed ID 20189936
P-Value 6 X 10-06
Trait Height
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs8055236
Pubmed ID 17554300
P-Value 6 X 10-06
Trait Coronary heart disease
Genome-wide scan identifies CDH13 as a novel susceptibility locus contributing to blood pressure determination in two European populations.
SNP rs rs11646213
Pubmed ID 19304780
P-Value 8 X 10-06
Trait Hypertension
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs11646411
Pubmed ID 18839057
P-Value 7 X 10-06
Trait Attention deficit hyperactivity disorder
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs17216786
Pubmed ID 20195266
P-Value 1 X 10-06
Trait Response to antipsychotic treatment
Gene INTS12
Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.
SNP rs rs11727189
Pubmed ID 20010835
P-Value 5 X 10-17
Trait Pulmonary function
Gene FAM179A
Genome-wide association study of recurrent early-onset major depressive disorder.
SNP rs rs882632
Pubmed ID 20125088
P-Value 2 X 10-06
Trait Major depressive disorder
Gene SLC7A10
Common variants at five new loci associated with early-onset inflammatory bowel disease.
SNP rs rs10500264
Pubmed ID 19915574
P-Value 4 X 10-10
Trait Inflammatory bowel disease (early onset)
Gene FAM76B
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs1939875
Pubmed ID 20208534
P-Value 3 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Gene PXK
Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci.
SNP rs rs6445975
Pubmed ID 18204446
P-Value 7 X 10-09
Trait Systemic lupus erythematosus
Gene DCPS
Genetic Signatures of Exceptional Longevity in Humans
SNP rs rs1695739
Pubmed ID 20595579
P-Value 5 X 10-07
Trait Longevity
Gene SAMSN1
New sequence variants associated with bone mineral density.
SNP rs rs1006899
Pubmed ID 19079262
P-Value 6 X 10-06
Trait Bone mineral density (spine)
Gene DENND1A
A genome-wide association study of Cloninger's temperament scales: Implications for the evolutionary genetics of personality
SNP rs rs7852296
Pubmed ID 20691247
P-Value 9 X 10-06
Trait Personality dimensions
Gene DDX1
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs7586898
Pubmed ID 19896111
P-Value 2 X 10-06
Trait Hair morphology
Gene SLC22A5
Novel loci, including those related to Crohn disease, psoriasis, and inflammation, identified in a genome-wide association study of fibrinogen in 17 686 women: the Women's Genome Health Study.
SNP rs rs1016988
Pubmed ID 20031577
P-Value 1 X 10-12
Trait Fibrinogen
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs6596075
Pubmed ID 17554300
P-Value 3 X 10-06
Trait Crohn's disease
Gene RFPL1
A genome-wide association study of carotid atherosclerosis in HIV-infected men.
SNP rs rs13053817
Pubmed ID 20009918
P-Value 2 X 10-06
Trait Carotid atherosclerosis in HIV infection
Gene TMCC2
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs1668873
Pubmed ID 19820697
P-Value 1 X 10-20
Trait Mean platelet volume
Gene ULK3
Genome-wide association study of blood pressure and hypertension.
SNP rs rs6495122
Pubmed ID 19430479
P-Value 2 X 10-10
Trait Diastolic blood pressure
Gene RPS26P38
A Meta-analysis of Four Genome-Wide Association Studies of Survival to Age 90 Years or Older: The Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium
SNP rs rs9664222
Pubmed ID 20304771
P-Value 7 X 10-07
Trait Longevity
Gene PSRC1
Genomewide association analysis of coronary artery disease.
SNP rs rs599839
Pubmed ID 17634449
P-Value 4 X 10-09
Trait Coronary heart disease
Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia.
SNP rs rs599839
Pubmed ID 18179892
P-Value 1 X 10-07
Trait LDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs599839
Pubmed ID 18193043
P-Value 6 X 10-33
Trait LDL cholesterol
LDL-cholesterol concentrations: a genome-wide association study.
SNP rs rs599839
Pubmed ID 18262040
P-Value 1 X 10-33
Trait LDL cholesterol
Genome-wide association study of Lp-PLA(2) activity and mass in the Framingham Heart Study
SNP rs rs599839
Pubmed ID 20442857
P-Value 3 X 10-15
Trait Lipoprotein-associated phospholipase A2 activity and mass
Gene RNF145
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs1473247
Pubmed ID 19820697
P-Value 3 X 10-07
Trait Mean platelet volume
Gene FBP2
Identification of 15 loci influencing height in a Korean population.
SNP rs rs16910061
Pubmed ID 19893584
P-Value 3 X 10-06
Trait Height
Gene APOC1
Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.
SNP rs rs4420638
Pubmed ID 17463246
P-Value 3 X 10-13
Trait Triglycerides
A high-density whole-genome association study reveals that APOE is the major susceptibility gene for sporadic late-onset Alzheimer's disease.
SNP rs rs4420638
Pubmed ID 17474819
P-Value 1 X 10-39
Trait Alzheimer's disease (late onset)
Sorl1 as an Alzheimer's disease predisposition gene?
SNP rs rs4420638
Pubmed ID 17975299
P-Value 1 X 10-39
Trait Alzheimer's disease
Candidate single-nucleotide polymorphisms from a genomewide association study of Alzheimer disease.
SNP rs rs4420638
Pubmed ID 17998437
P-Value 2 X 10-44
Trait Alzheimer's disease
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs4420638
Pubmed ID 18193043
P-Value 3 X 10-43
Trait LDL cholesterol
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs4420638
Pubmed ID 18193044
P-Value 1 X 10-60
Trait LDL cholesterol
LDL-cholesterol concentrations: a genome-wide association study.
SNP rs rs4420638
Pubmed ID 18262040
P-Value 1 X 10-20
Trait LDL cholesterol
Common SNPs in HMGCR in micronesians and whites associated with LDL-cholesterol levels affect alternative splicing of exon13.
SNP rs rs4420638
Pubmed ID 18802019
P-Value 2 X 10-07
Trait LDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs4420638
Pubmed ID 19060906
P-Value 4 X 10-27
Trait LDL cholesterol
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs4420638
Pubmed ID 19197348
P-Value 3 X 10-07
Trait Quantitative traits
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs4420638
Pubmed ID 19197348
P-Value 5 X 10-06
Trait Quantitative traits
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs4420638
Pubmed ID 19197348
P-Value 2 X 10-06
Trait Quantitative traits
Genetic Loci associated with C-reactive protein levels and risk of coronary heart disease.
SNP rs rs4420638
Pubmed ID 19567438
P-Value 5 X 10-27
Trait C-reactive protein
Genome-wide association study of Lp-PLA(2) activity and mass in the Framingham Heart Study
SNP rs rs4420638
Pubmed ID 20442857
P-Value 6 X 10-24
Trait Lipoprotein-associated phospholipase A2 activity and mass
Gene N6AMT1
Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study.
SNP rs rs2832077
Pubmed ID 17903297
P-Value 2 X 10-06
Trait Cognitive test performance
Gene AKD1
Genetic variation in IL28B predicts hepatitis C treatment-induced viral clearance.
SNP rs rs9400317
Pubmed ID 19684573
P-Value 7 X 10-06
Trait Response to hepatitis C treatment
Gene IRF6
Key susceptibility locus for nonsyndromic cleft lip with or without cleft palate on chromosome 8q24.
SNP rs rs642961
Pubmed ID 19270707
P-Value 2 X 10-06
Trait Nonsyndromic cleft lip with or without cleft palate
A genome-wide association study of cleft lip with and without cleft palate identifies risk variants near MAFB and ABCA4
SNP rs rs10863790
Pubmed ID 20436469
P-Value 1 X 10-14
Trait Cleft lip
Gene LRIG3
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs11172782
Pubmed ID 20445134
P-Value 7 X 10-08
Trait Heart failure
Gene HDAC5
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
SNP rs rs228769
Pubmed ID 19801982
P-Value 4 X 10-06
Trait Bone mineral density (spine)
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
SNP rs rs228769
Pubmed ID 19801982
P-Value 2 X 10-08
Trait Bone mineral density (hip)
Gene SLC6A13
New loci associated with kidney function and chronic kidney disease
SNP rs rs10774021
Pubmed ID 20383146
P-Value 1 X 10-09
Trait Chronic kidney disease
Gene RPS15AP34
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs1381102
Pubmed ID 18951430
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene ZNF433
Evidence for VAV2 and ZNF433 as susceptibility genes for multiple sclerosis
SNP rs rs3745672
Pubmed ID 20598377
P-Value 1 X 10-06
Trait Multiple sclerosis
Gene PDE8B
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs4457053
Pubmed ID 20581827
P-Value 3 X 10-12
Trait Type 2 diabetes
Gene INO80D
Common body mass index-associated variants confer risk of extreme obesity.
SNP rs rs7603514
Pubmed ID 19553259
P-Value 8 X 10-06
Trait Obesity (extreme)
Gene NRXN3
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs6574433
Pubmed ID 20125193
P-Value 6 X 10-06
Trait Cognitive test performance
NRXN3 is a novel locus for waist circumference: a genome-wide association study from the CHARGE Consortium.
SNP rs rs10146997
Pubmed ID 19557197
P-Value 5 X 10-08
Trait Waist circumference
Gene METTL4
Germline genomic variants associated with childhood acute lymphoblastic leukemia.
SNP rs rs1879352
Pubmed ID 19684603
P-Value 9 X 10-06
Trait Acute lymphoblastic leukemia (childhood)
Genome-Wide Association Study of Exercise Behavior in Dutch and American Adults.
SNP rs rs8097348
Pubmed ID 19727025
P-Value 7 X 10-06
Trait Exercise (leisure time)
Gene SHROOM3
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs1986734
Pubmed ID 20208534
P-Value 1 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Genetic loci influencing kidney function and chronic kidney disease
SNP rs rs9992101
Pubmed ID 20383145
P-Value 6 X 10-09
Trait Serum creatinine
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs13106227
Pubmed ID 20208534
P-Value 4 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Genome-Wide Association Studies of Serum Magnesium, Potassium, and Sodium Concentrations Identify Six Loci Influencing Serum Magnesium Levels
SNP rs rs13146355
Pubmed ID 20700443
P-Value 6 X 10-13
Trait Serum magnesium levels
Multiple loci associated with indices of renal function and chronic kidney disease.
SNP rs rs17319721
Pubmed ID 19430482
P-Value 1 X 10-12
Trait Renal function and chronic kidney disease
New loci associated with kidney function and chronic kidney disease
SNP rs rs17319721
Pubmed ID 20383146
P-Value 1 X 10-19
Trait Chronic kidney disease
Gene LAMB1
Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.
SNP rs rs2158836
Pubmed ID 19122664
P-Value 7 X 10-06
Trait Ulcerative colitis
Gene PLEKHG1
Genome-wide association study of panic disorder in the Japanese population.
SNP rs rs9372078
Pubmed ID 19165232
P-Value 5 X 10-07
Trait Panic disorder
Gene WDR7
Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
SNP rs rs1557351
Pubmed ID 19010793
P-Value 4 X 10-06
Trait Multiple sclerosis (age of onset)
Gene PROC
A genome-wide association study of self-rated health
SNP rs rs1799810
Pubmed ID 20707712
P-Value 9 X 10-06
Trait Self-rated health
Gene PAM
Common variants conferring risk of schizophrenia.
SNP rs rs1502844
Pubmed ID 19571808
P-Value 1 X 10-06
Trait Schizophrenia
Gene MBOAT1
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs1202199
Pubmed ID 18821565
P-Value 9 X 10-06
Trait Hyperactive-impulsive symptoms
Gene CLECL1
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs11052552
Pubmed ID 17554300
P-Value 7 X 10-07
Trait Type 1 diabetes
Gene ANXA13
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs10088262
Pubmed ID 20686608
P-Value 4 X 10-06
Trait Pancreatic cancer
Gene CLOCK
Genome-wide association scan for five major dimensions of personality.
SNP rs rs6832769
Pubmed ID 18957941
P-Value 2 X 10-06
Trait Personality dimensions
Gene PITRM1
Genome-wide association with bone mass and geometry in the Framingham Heart Study.
SNP rs rs2165468
Pubmed ID 17903296
P-Value 1 X 10-06
Trait Bone mineral density
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs2764980
Pubmed ID 18951430
P-Value 9 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene HBS1L
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs4895441
Pubmed ID 19862010
P-Value 7 X 10-86
Trait Mean corpuscular volume
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs4895441
Pubmed ID 20139978
P-Value 2 X 10-09
Trait Hematological and biochemical traits
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs7775698
Pubmed ID 19853236
P-Value 8 X 10-18
Trait Hematology traits
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs7775698
Pubmed ID 19853236
P-Value 5 X 10-13
Trait Hematology traits
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs7775698
Pubmed ID 20139978
P-Value 3 X 10-56
Trait Hematological and biochemical traits
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs7775698
Pubmed ID 20139978
P-Value 3 X 10-66
Trait Hematological and biochemical traits
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs7776054
Pubmed ID 19862010
P-Value 7 X 10-69
Trait Mean corpuscular hemoglobin
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9373124
Pubmed ID 19862010
P-Value 7 X 10-14
Trait Other erythrocyte phenotypes
A genome-wide association identified the common genetic variants influence disease severity in beta(0)-thalassemia/hemoglobin E.
SNP rs rs9376092
Pubmed ID 19924444
P-Value 2 X 10-11
Trait Beta thalassemia/hemoglobin E disease
A QTL influencing F cell production maps to a gene encoding a zinc-finger protein on chromosome 2p15.
SNP rs rs9399137
Pubmed ID 17767159
P-Value 3 X 10-36
Trait F-cell distribution
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs9399137
Pubmed ID 19853236
P-Value 1 X 10-09
Trait Hematology traits
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs9402686
Pubmed ID 19820697
P-Value 7 X 10-42
Trait Hematological parameters
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9483788
Pubmed ID 19862010
P-Value 1 X 10-47
Trait Other erythrocyte phenotypes
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs9483788
Pubmed ID 19862010
P-Value 3 X 10-15
Trait Hematocrit
Gene LOC728927
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs10266483
Pubmed ID 20339536
P-Value 8 X 10-06
Trait Response to statin therapy
Gene COMMD10
Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
SNP rs rs7702057
Pubmed ID 19451621
P-Value 8 X 10-06
Trait Amyotrophic lateral sclerosis
Gene HMGA2
Many sequence variants affecting diversity of adult human height.
SNP rs rs8756
Pubmed ID 18391951
P-Value 2 X 10-16
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs8756
Pubmed ID 19343178
P-Value 5 X 10-14
Trait Height
Genome-Wide Association Study of Height and Body Mass Index in Australian Twin Families
SNP rs rs8756
Pubmed ID 20397748
P-Value 4 X 10-07
Trait Height
A common variant of HMGA2 is associated with adult and childhood height in the general population.
SNP rs rs1042725
Pubmed ID 17767157
P-Value 6 X 10-16
Trait Height
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs1042725
Pubmed ID 18391950
P-Value 3 X 10-20
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs1042725
Pubmed ID 18391952
P-Value 3 X 10-18
Trait Height
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
SNP rs rs4026608
Pubmed ID 19584346
P-Value 2 X 10-09
Trait Aortic root size
Genome-wide association study reveals multiple loci associated with primary tooth development during infancy.
SNP rs rs12424086
Pubmed ID 20195514
P-Value 8 X 10-06
Trait Primary tooth development (time to first tooth eruption)
Genome-wide association study reveals multiple loci associated with primary tooth development during infancy.
SNP rs rs12424086
Pubmed ID 20195514
P-Value 4 X 10-06
Trait Primary tooth development (number of teeth)
Gene CDH4
Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study.
SNP rs rs1970546
Pubmed ID 17903297
P-Value 4 X 10-08
Trait Volumetric brain MRI
Gene TNRC6B
A genome-wide association study of northwestern Europeans involves the C-type natriuretic peptide signaling pathway in the etiology of human height variation.
SNP rs rs139909
Pubmed ID 19570815
P-Value 2 X 10-07
Trait Height
Sequence variants at 22q13 are associated with prostate cancer risk.
SNP rs rs9623117
Pubmed ID 19117981
P-Value 5 X 10-07
Trait Prostate cancer
Gene FARP1
Voxelwise genome-wide association study (vGWAS).
SNP rs rs688872
Pubmed ID 20171287
P-Value 1 X 10-06
Trait Brain structure
Gene C1QTNF3
Genome-wide association study identifies single-nucleotide polymorphism in KCNB1 associated with left ventricular mass in humans: the HyperGEN Study.
SNP rs rs409045
Pubmed ID 19454037
P-Value 8 X 10-07
Trait Left ventricular mass
Gene CTNNA3
Novel genes identified in a high-density genome wide association study for nicotine dependence.
SNP rs rs4142041
Pubmed ID 17158188
P-Value 6 X 10-06
Trait Nicotine dependence
Alpha-T-catenin (CTNNA3) gene was identified as a risk variant for toluene diisocyanate-induced asthma by genome-wide association analysis.
SNP rs rs10762058
Pubmed ID 19187332
P-Value 6 X 10-06
Trait Asthma (toluene diisocyanate-induced)
Genetic Signatures of Exceptional Longevity in Humans
SNP rs rs16922827
Pubmed ID 20595579
P-Value 1 X 10-09
Trait Longevity
Gene ANXA6
Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways.
SNP rs rs17728338
Pubmed ID 19169254
P-Value 1 X 10-20
Trait Psoriasis
Gene BIK
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs5759167
Pubmed ID 19767753
P-Value 6 X 10-29
Trait Prostate cancer
Gene MKL1
A genome-wide association study of northwestern Europeans involves the C-type natriuretic peptide signaling pathway in the etiology of human height variation.
SNP rs rs5757949
Pubmed ID 19570815
P-Value 4 X 10-06
Trait Height
Gene OSGIN2
Genomewide association study of leprosy.
SNP rs rs40457
Pubmed ID 20018961
P-Value 1 X 10-12
Trait Leprosy
Gene NKAIN2
A genome-wide association study of neuroticism in a population-based sample
SNP rs rs9491140
Pubmed ID 20634892
P-Value 3 X 10-07
Trait Neuroticism
Gene CBS
Novel associations of CPS1, MUT, NOX4, and DPEP1 with plasma homocysteine in a healthy population: a genome-wide evaluation of 13 974 participants in the Women's Genome Health Study.
SNP rs rs6586282
Pubmed ID 20031578
P-Value 3 X 10-10
Trait Plasma homocysteine
Gene CREB5
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs2237349
Pubmed ID 18839057
P-Value 5 X 10-06
Trait Attention deficit hyperactivity disorder
Gene TBL2
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs17145738
Pubmed ID 18193043
P-Value 2 X 10-12
Trait Triglycerides
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs17145738
Pubmed ID 18193044
P-Value 7 X 10-22
Trait Triglycerides
Gene LPPR4
Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.
SNP rs rs7543130
Pubmed ID 19584346
P-Value 1 X 10-07
Trait Aortic root size
Gene TGFB2
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs1018040
Pubmed ID 18821565
P-Value 5 X 10-06
Trait Attention deficit hyperactivity disorder
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs1018040
Pubmed ID 18821565
P-Value 8 X 10-06
Trait Hyperactive-impulsive symptoms
Gene IL21R
PTH and IL21R May Underlie Variation of Femoral Neck Bone Mineral Density as Revealed by a Genome-Wide Association Study.
SNP rs rs8057551
Pubmed ID 19874204
P-Value 2 X 10-06
Trait Bone mineral density
Gene ETS1
Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus.
SNP rs rs1128334
Pubmed ID 20169177
P-Value 2 X 10-11
Trait Systemic lupus erythematosus
Hippocampal atrophy as a quantitative trait in a genome-wide association study identifying novel susceptibility genes for Alzheimer's disease.
SNP rs rs6590322
Pubmed ID 19668339
P-Value 9 X 10-06
Trait Hippocampal atrophy
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs6590330
Pubmed ID 19838193
P-Value 2 X 10-25
Trait Systemic lupus erythematosus
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs11221332
Pubmed ID 20190752
P-Value 5 X 10-16
Trait Celiac disease
Gene HOXB2
Genome-wide association study reveals multiple loci associated with primary tooth development during infancy.
SNP rs rs6504340
Pubmed ID 20195514
P-Value 6 X 10-07
Trait Primary tooth development (number of teeth)
Gene HLA-DPB1
A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians.
SNP rs rs9277535
Pubmed ID 19349983
P-Value 6 X 10-39
Trait Hepatitis B
Gene RPS20P32
Alpha-T-catenin (CTNNA3) gene was identified as a risk variant for toluene diisocyanate-induced asthma by genome-wide association analysis.
SNP rs rs9319321
Pubmed ID 19187332
P-Value 3 X 10-06
Trait Asthma (toluene diisocyanate-induced)
A genome-wide association study identifies three new susceptibility loci for ulcerative colitis in the Japanese population.
SNP rs rs17085007
Pubmed ID 19915573
P-Value 7 X 10-08
Trait Ulcerative colitis
Gene TRIB1
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs1551398
Pubmed ID 18587394
P-Value 5 X 10-09
Trait Crohn's disease
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs2954029
Pubmed ID 19060906
P-Value 3 X 10-19
Trait Triglycerides
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs2954038
Pubmed ID 20339536
P-Value 7 X 10-06
Trait Response to statin therapy
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs6987702
Pubmed ID 19060911
P-Value 3 X 10-09
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs6987702
Pubmed ID 19060911
P-Value 3 X 10-06
Trait LDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs17321515
Pubmed ID 18193043
P-Value 7 X 10-13
Trait Triglycerides
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs17321515
Pubmed ID 18193044
P-Value 4 X 10-17
Trait Triglycerides
Gene CD58
Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.
SNP rs rs1335532
Pubmed ID 19525955
P-Value 1 X 10-07
Trait Multiple sclerosis
Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci.
SNP rs rs2300747
Pubmed ID 19525953
P-Value 3 X 10-10
Trait Multiple sclerosis
Gene ATG4C
Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness
SNP rs rs10493340
Pubmed ID 17903302
P-Value 2 X 10-06
Trait Blood pressure
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs12130333
Pubmed ID 18193044
P-Value 2 X 10-08
Trait Triglycerides
Gene ADD3
Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2
SNP rs rs17095355
Pubmed ID 20460270
P-Value 7 X 10-09
Trait Biliary atresia
Gene PCIF1
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs7679
Pubmed ID 19060906
P-Value 4 X 10-09
Trait HDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs7679
Pubmed ID 19060906
P-Value 7 X 10-11
Trait Triglycerides
Gene LRRN1
Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.
SNP rs rs1601875
Pubmed ID 18711365
P-Value 7 X 10-06
Trait Bipolar disorder
Gene ITGB8
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs10950821
Pubmed ID 20339536
P-Value 7 X 10-06
Trait Response to statin therapy
Gene FUT2
Common variants of FUT2 are associated with plasma vitamin B12 levels.
SNP rs rs492602
Pubmed ID 18776911
P-Value 5 X 10-17
Trait Plasma level of vitamin B12
Fucosyltransferase 2(FUT2) Non-Secretor Status is associated with Crohn's Disease
SNP rs rs504963
Pubmed ID 20570966
P-Value 2 X 10-08
Trait Crohn's disease
Genome-wide association study of vitamin B6, vitamin B12, folate, and homocysteine blood concentrations.
SNP rs rs602662
Pubmed ID 19303062
P-Value 3 X 10-20
Trait Folate pathway vitamin levels
Gene HCG27
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs6903896
Pubmed ID 20585627
P-Value 6 X 10-07
Trait Common traits (Other)
Gene THEM4
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs10788819
Pubmed ID 19896111
P-Value 2 X 10-08
Trait Hair morphology
Gene UNC13A
Genome-wide association study identifies 19p13.3 (UNC13A) and 9p21.2 as susceptibility loci for sporadic amyotrophic lateral sclerosis.
SNP rs rs12608932
Pubmed ID 19734901
P-Value 3 X 10-14
Trait Amyotrophic lateral sclerosis
Gene FSTL4
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs1644305
Pubmed ID 18951430
P-Value 8 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs17166496
Pubmed ID 17554300
P-Value 5 X 10-06
Trait Type 1 diabetes
Gene ANXA5
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs7659604
Pubmed ID 17554300
P-Value 9 X 10-06
Trait Type 2 diabetes
Gene MORN2
Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
SNP rs rs3099950
Pubmed ID 19451621
P-Value 8 X 10-06
Trait Amyotrophic lateral sclerosis
Gene BCO2
Genome-wide association study identifies variants at the IL18-BCO2 locus associated with interleukin-18 levels.
SNP rs rs2115763
Pubmed ID 20150558
P-Value 4 X 10-09
Trait Interleukin-18 levels
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs2250417
Pubmed ID 18464913
P-Value 7 X 10-13
Trait Protein quantitative trait loci
Gene ZNF230
Germline genomic variants associated with childhood acute lymphoblastic leukemia.
SNP rs rs2191566
Pubmed ID 19684603
P-Value 4 X 10-07
Trait Acute lymphoblastic leukemia (childhood)
Gene ARHGAP1
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
SNP rs rs7932354
Pubmed ID 19801982
P-Value 4 X 10-09
Trait Bone mineral density (hip)
Gene RNGTT
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs10485165
Pubmed ID 17903293
P-Value 1 X 10-06
Trait Select biomarker traits
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs12527253
Pubmed ID 20339536
P-Value 1 X 10-06
Trait Response to statin therapy
Gene RPL21P93
Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.
SNP rs rs1612122
Pubmed ID 20038947
P-Value 7 X 10-06
Trait Major depressive disorder (broad)
Gene SOX6
Powerful bivariate genome-wide association analyses suggest the SOX6 gene influencing both obesity and osteoporosis phenotypes in males.
SNP rs rs297325
Pubmed ID 19714249
P-Value 4 X 10-07
Trait Obesity and osteoporosis
Powerful bivariate genome-wide association analyses suggest the SOX6 gene influencing both obesity and osteoporosis phenotypes in males.
SNP rs rs4756846
Pubmed ID 19714249
P-Value 5 X 10-07
Trait Obesity and osteoporosis
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
SNP rs rs7117858
Pubmed ID 19801982
P-Value 6 X 10-10
Trait Bone mineral density (hip)
Gene EMCN
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs1405687
Pubmed ID 20195266
P-Value 5 X 10-08
Trait Response to antipsychotic treatment
Gene MAP3K1
Genome-wide association study identifies novel breast cancer susceptibility loci.
SNP rs rs889312
Pubmed ID 17529967
P-Value 7 X 10-20
Trait Breast cancer
Genome-wide association study identifies five new breast cancer susceptibility loci
SNP rs rs889312
Pubmed ID 20453838
P-Value 5 X 10-09
Trait Breast cancer
A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).
SNP rs rs16886165
Pubmed ID 19330030
P-Value 5 X 10-07
Trait Breast cancer
Gene KPNA7
Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL).
SNP rs rs7809799
Pubmed ID 20228798
P-Value 9 X 10-11
Trait Ulcerative colitis
Gene RXRG
Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03).
SNP rs rs10800098
Pubmed ID 19754311
P-Value 4 X 10-06
Trait AIDS
Gene FGF9
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs518590
Pubmed ID 20195266
P-Value 2 X 10-07
Trait Response to antipsychotic treatment
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs7318731
Pubmed ID 20031603
P-Value 1 X 10-06
Trait RR interval (heart rate)
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs17369571
Pubmed ID 18464913
P-Value 1 X 10-07
Trait Protein quantitative trait loci
Gene VPS37A
Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness
SNP rs rs3793427
Pubmed ID 17903302
P-Value 2 X 10-06
Trait Tonometry
Gene MMP24
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs1555322
Pubmed ID 18839057
P-Value 4 X 10-06
Trait Attention deficit hyperactivity disorder
Gene PIK3C3
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs8085804
Pubmed ID 19734545
P-Value 8 X 10-06
Trait Cognitive performance
Gene ERG
Genome-wide association study of cardiac manifestations of neonatal lupus identifies candidate loci at 6p21 and 21q22
SNP rs rs743446
Pubmed ID 20662065
P-Value 5 X 10-06
Trait Neonatal lupus
Gene TRIM38
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs12216125
Pubmed ID 19084217
P-Value 4 X 10-06
Trait Serum markers of iron status
Gene TACC1
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs7832232
Pubmed ID 20686608
P-Value 5 X 10-06
Trait Pancreatic cancer
Gene RAPGEF2
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs17291045
Pubmed ID 20041166
P-Value 5 X 10-08
Trait HIV-1 control
Gene ITGA4
Genome-wide association study of ankylosing spondylitis identifies non-MHC susceptibility loci.
SNP rs rs1018326
Pubmed ID 20062062
P-Value 2 X 10-06
Trait Ankylosing spondylitis
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs13010713
Pubmed ID 20190752
P-Value 5 X 10-11
Trait Celiac disease
Gene PLEKHA7
Genome-wide association study of blood pressure and hypertension.
SNP rs rs381815
Pubmed ID 19430479
P-Value 2 X 10-09
Trait Systolic blood pressure
Genome-wide association study of blood pressure and hypertension.
SNP rs rs11024074
Pubmed ID 19430479
P-Value 1 X 10-06
Trait Diastolic blood pressure
Gene MYEOV
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs7130881
Pubmed ID 19767753
P-Value 8 X 10-13
Trait Prostate cancer
Multiple newly identified loci associated with prostate cancer susceptibility.
SNP rs rs7931342
Pubmed ID 18264097
P-Value 2 X 10-12
Trait Prostate cancer
Multiple loci identified in a genome-wide association study of prostate cancer.
SNP rs rs10896449
Pubmed ID 18264096
P-Value 2 X 10-09
Trait Prostate cancer
Genome-wide association and replication studies identify four variants associated with prostate cancer susceptibility.
SNP rs rs11228565
Pubmed ID 19767754
P-Value 7 X 10-12
Trait Prostate cancer
Gene SOX14
A genome-wide association study of acenocoumarol maintenance dosage.
SNP rs rs10935268
Pubmed ID 19578179
P-Value 8 X 10-07
Trait Acenocoumarol maintenance dosage
Gene RSBN1
Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.
SNP rs rs6679677
Pubmed ID 17554260
P-Value 8 X 10-24
Trait Type 1 diabetes
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs6679677
Pubmed ID 17554300
P-Value 6 X 10-25
Trait Rheumatoid arthritis
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs6679677
Pubmed ID 17554300
P-Value 5 X 10-26
Trait Type 1 diabetes
Common variants at CD40 and other loci confer risk of rheumatoid arthritis.
SNP rs rs6679677
Pubmed ID 18794853
P-Value 6 X 10-42
Trait Rheumatoid arthritis
Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.
SNP rs rs6679677
Pubmed ID 18978792
P-Value 1 X 10-40
Trait Type 1 diabetes
Gene MRVI1
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs7940646
Pubmed ID 20526338
P-Value 1 X 10-06
Trait Platelet aggregation
Gene STX4
A genome-wide scan for common genetic variants with a large influence on warfarin maintenance dose.
SNP rs rs10871454
Pubmed ID 18535201
P-Value 5 X 10-34
Trait Warfarin maintenance dose
Gene SNTB1
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs11989782
Pubmed ID 20208534
P-Value 7 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Gene ANXA1
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs11143609
Pubmed ID 20041166
P-Value 7 X 10-06
Trait HIV-1 control
Gene UTP20
Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study.
SNP rs rs10507130
Pubmed ID 17903303
P-Value 7 X 10-06
Trait Coronary artery calcification
Gene PTPRC
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs12127588
Pubmed ID 20139978
P-Value 7 X 10-10
Trait Hematological and biochemical traits
Gene PITX2
Variants conferring risk of atrial fibrillation on chromosome 4q25.
SNP rs rs2200733
Pubmed ID 17603472
P-Value 3 X 10-41
Trait Atrial fibrillation/atrial flutter
Risk variants for atrial fibrillation on chromosome 4q25 associate with ischemic stroke.
SNP rs rs2200733
Pubmed ID 18991354
P-Value 2 X 10-10
Trait Ischemic stroke
A sequence variant in ZFHX3 on 16q22 associates with atrial fibrillation and ischemic stroke.
SNP rs rs2200733
Pubmed ID 19597491
P-Value 1 X 10-14
Trait Atrial fibrillation
Variants conferring risk of atrial fibrillation on chromosome 4q25.
SNP rs rs10033464
Pubmed ID 17603472
P-Value 7 X 10-11
Trait Atrial fibrillation/atrial flutter
Variants in ZFHX3 are associated with atrial fibrillation in individuals of European ancestry.
SNP rs rs17042171
Pubmed ID 19597492
P-Value 4 X 10-63
Trait Atrial fibrillation
Gene C6orf100
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs4947339
Pubmed ID 20526338
P-Value 2 X 10-06
Trait Platelet aggregation
Gene LCE3D
Psoriasis genome-wide association study identifies susceptibility variants within LCE gene cluster at 1q21.
SNP rs rs4085613
Pubmed ID 19169255
P-Value 7 X 10-30
Trait Psoriasis
Gene SLC7A9
New loci associated with kidney function and chronic kidney disease
SNP rs rs12460876
Pubmed ID 20383146
P-Value 3 X 10-15
Trait Chronic kidney disease
Gene PLEKHM1
Genome-wide association study confirms SNPs in SNCA and the MAPT region as common risk factors for Parkinson disease.
SNP rs rs11012
Pubmed ID 20070850
P-Value 6 X 10-08
Trait Parkinson's disease
Gene ZFP57
Genome-wide association study reveals multiple nasopharyngeal carcinoma-associated loci within the HLA region at chromosome 6p21.3.
SNP rs rs3129055
Pubmed ID 19664746
P-Value 7 X 10-11
Trait Nasopharyngeal carcinoma
Gene GPR39
Genome-wide association study of conduct disorder symptomatology
SNP rs rs16831128
Pubmed ID 20585324
P-Value 5 X 10-06
Trait Conduct disorder (symptom count)
Genome-wide association study of conduct disorder symptomatology
SNP rs rs16831128
Pubmed ID 20585324
P-Value 4 X 10-07
Trait Conduct disorder (case status)
Gene FGB
Novel loci, including those related to Crohn disease, psoriasis, and inflammation, identified in a genome-wide association study of fibrinogen in 17 686 women: the Women's Genome Health Study.
SNP rs rs6056
Pubmed ID 20031577
P-Value 8 X 10-39
Trait Fibrinogen
Association of novel genetic Loci with circulating fibrinogen levels: a genome-wide association study in 6 population-based cohorts.
SNP rs rs1800789
Pubmed ID 20031576
P-Value 2 X 10-30
Trait Fibrinogen
Gene RGL1
Genome-Wide Pharmacogenetics of Antidepressant Response in the GENDEP Project
SNP rs rs4651156
Pubmed ID 20360315
P-Value 3 X 10-06
Trait Response to antidepressants
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs10797919
Pubmed ID 18951430
P-Value 9 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene ZNF224
Genome-wide association study implicates a chromosome 12 risk locus for late-onset Alzheimer disease.
SNP rs rs2061333
Pubmed ID 19118814
P-Value 2 X 10-06
Trait Alzheimer's disease
Gene HK1
Novel association of HK1 with glycated hemoglobin in a non-diabetic population: a genome-wide evaluation of 14,618 participants in the Women's Genome Health Study.
SNP rs rs7072268
Pubmed ID 19096518
P-Value 2 X 10-25
Trait Glycated hemoglobin levels
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs16926246
Pubmed ID 19862010
P-Value 2 X 10-11
Trait Hemoglobin
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs16926246
Pubmed ID 19862010
P-Value 1 X 10-13
Trait Hematocrit
Gene BMP4
Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.
SNP rs rs4444235
Pubmed ID 19011631
P-Value 8 X 10-10
Trait Colorectal cancer
Genome-wide association study reveals genetic risk underlying Parkinson's disease.
SNP rs rs12431733
Pubmed ID 19915575
P-Value 3 X 10-06
Trait Parkinson's disease
Gene NUP37
Identification of 15 loci influencing height in a Korean population.
SNP rs rs2292303
Pubmed ID 19893584
P-Value 8 X 10-06
Trait Height
Gene UQCC
Common variants in the GDF5-UQCC region are associated with variation in human height.
SNP rs rs6060369
Pubmed ID 18193045
P-Value 2 X 10-16
Trait Height
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs6060369
Pubmed ID 18391950
P-Value 1 X 10-16
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs6060373
Pubmed ID 18391952
P-Value 2 X 10-17
Trait Height
Many sequence variants affecting diversity of adult human height.
SNP rs rs6088792
Pubmed ID 18391951
P-Value 8 X 10-07
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs6088813
Pubmed ID 19343178
P-Value 1 X 10-13
Trait Height
Gene ANAPC4
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs3816587
Pubmed ID 17554300
P-Value 9 X 10-06
Trait Rheumatoid arthritis
Gene PIP5K1B
New loci associated with kidney function and chronic kidney disease
SNP rs rs4744712
Pubmed ID 20383146
P-Value 8 X 10-14
Trait Chronic kidney disease
Gene C3orf50
Many sequence variants affecting diversity of adult human height.
SNP rs rs4345115
Pubmed ID 18391951
P-Value 7 X 10-06
Trait Height
Gene AAK1
Genomewide association study for onset age in Parkinson disease.
SNP rs rs7577851
Pubmed ID 19772629
P-Value 9 X 10-06
Trait Parkinson's disease (age of onset)
Gene AGRN
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
SNP rs rs3934834
Pubmed ID 19851299
P-Value 6 X 10-07
Trait Body mass index
Gene EPAS1
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs12623288
Pubmed ID 19896111
P-Value 3 X 10-06
Trait Hair morphology
Gene PPARGC1B
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs32579
Pubmed ID 19340012
P-Value 4 X 10-06
Trait Tanning
Gene CC2D2A
Genome-wide association study of conduct disorder symptomatology
SNP rs rs1861050
Pubmed ID 20585324
P-Value 8 X 10-06
Trait Conduct disorder (case status)
Gene RNF43
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs2257205
Pubmed ID 20686608
P-Value 8 X 10-06
Trait Pancreatic cancer
Gene CDKN1A
Several common variants modulate heart rate, PR interval and QRS duration.
SNP rs rs1321311
Pubmed ID 20062063
P-Value 3 X 10-10
Trait Electrocardiographic traits
Gene EXT1
Identification of 15 loci influencing height in a Korean population.
SNP rs rs11989122
Pubmed ID 19893584
P-Value 6 X 10-06
Trait Height
Gene ITPR2
ITPR2 as a susceptibility gene in sporadic amyotrophic lateral sclerosis: a genome-wide association study.
SNP rs rs2306677
Pubmed ID 17827064
P-Value 3 X 10-06
Trait Amyotrophic lateral sclerosis
Gene FAM13A
Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.
SNP rs rs2869967
Pubmed ID 20010835
P-Value 1 X 10-07
Trait Pulmonary function
Variants in FAM13A are associated with chronic obstructive pulmonary disease.
SNP rs rs7671167
Pubmed ID 20173748
P-Value 1 X 10-11
Trait Chronic obstructive pulmonary disease
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs16996151
Pubmed ID 19875103
P-Value 6 X 10-06
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Gene NOVA1
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs1951082
Pubmed ID 18951430
P-Value 5 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene GIT2
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs2292354
Pubmed ID 20694148
P-Value 7 X 10-06
Trait Metabolic syndrome
Gene FAM188A
Genome-wide association study for early-onset and morbid adult obesity identifies three new risk loci in European populations.
SNP rs rs10508503
Pubmed ID 19151714
P-Value 2 X 10-07
Trait Obesity
Gene PAPOLA
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs17094273
Pubmed ID 19340012
P-Value 9 X 10-08
Trait Tanning
Gene DBH
Genome-wide meta-analyses identify multiple loci associated with smoking behavior
SNP rs rs3025343
Pubmed ID 20418890
P-Value 4 X 10-08
Trait Smoking behavior
Gene RPL12P33
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs2650000
Pubmed ID 19060906
P-Value 2 X 10-08
Trait LDL cholesterol
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
SNP rs rs2650000
Pubmed ID 19060910
P-Value 3 X 10-11
Trait Other metabolic traits
Gene CACNA1C
A genome-wide scan for common genetic variants with a large influence on warfarin maintenance dose.
SNP rs rs216013
Pubmed ID 18535201
P-Value 9 X 10-07
Trait Warfarin maintenance dose
Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.
SNP rs rs1006737
Pubmed ID 18711365
P-Value 7 X 10-08
Trait Bipolar disorder
Meta-analysis of genome-wide association data of bipolar disorder and major depressive disorder
SNP rs rs1006737
Pubmed ID 20351715
P-Value 3 X 10-08
Trait Bipolar disorder and major depressive disorder (combined)
Gene KCTD10
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs2338104
Pubmed ID 18193043
P-Value 3 X 10-08
Trait HDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs2338104
Pubmed ID 19060906
P-Value 1 X 10-10
Trait HDL cholesterol
Gene LMAN2L
Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.
SNP rs rs2314398
Pubmed ID 18711365
P-Value 3 X 10-06
Trait Bipolar disorder
Gene C11orf10
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs102275
Pubmed ID 20694148
P-Value 6 X 10-07
Trait Metabolic syndrome
Gene ETV6
Many sequence variants affecting diversity of adult human height.
SNP rs rs2187642
Pubmed ID 18391951
P-Value 2 X 10-06
Trait Height
Gene HBBP1
A genome-wide association identified the common genetic variants influence disease severity in beta(0)-thalassemia/hemoglobin E.
SNP rs rs2071348
Pubmed ID 19924444
P-Value 3 X 10-15
Trait Beta thalassemia/hemoglobin E disease
Gene PI16
Chemerin, a Novel Adipokine in the Regulation of Angiogenesis
SNP rs rs1405069
Pubmed ID 20237162
P-Value 6 X 10-06
Trait Plasma chemerin levels
Gene DUSP10
Genomic Variation Associated with Mortality among Adults of European and African Ancestry with Heart Failure: The CHARGE Consortium
SNP rs rs12733856
Pubmed ID 20400778
P-Value 3 X 10-06
Trait Mortality among heart failure patients
Gene TLR4
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs876347
Pubmed ID 19875103
P-Value 2 X 10-06
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Common variants conferring risk of schizophrenia.
SNP rs rs1572299
Pubmed ID 19571808
P-Value 4 X 10-06
Trait Schizophrenia
Gene DDX59
Genome-wide association study of electrocardiographic conduction measures in an isolated founder population: Kosrae.
SNP rs rs7512898
Pubmed ID 19389651
P-Value 5 X 10-06
Trait Electrocardiographic conduction measures
Gene SOX11
Genetic Signatures of Exceptional Longevity in Humans
SNP rs rs1377638
Pubmed ID 20595579
P-Value 3 X 10-07
Trait Longevity
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs1405262
Pubmed ID 20041166
P-Value 6 X 10-06
Trait HIV-1 control
New loci associated with kidney function and chronic kidney disease
SNP rs rs16864170
Pubmed ID 20383146
P-Value 2 X 10-07
Trait Chronic kidney disease
Gene C3
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration
SNP rs rs2230199
Pubmed ID 20385819
P-Value 1 X 10-10
Trait Age-related macular degeneration
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs2230199
Pubmed ID 20385826
P-Value 2 X 10-08
Trait Age-related macular degeneration
Gene METTL1
Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.
SNP rs rs703842
Pubmed ID 19525955
P-Value 5 X 10-11
Trait Multiple sclerosis
Gene CHD9
Genome-wide association study identifies novel breast cancer susceptibility loci.
SNP rs rs3803662
Pubmed ID 17529967
P-Value 1 X 10-36
Trait Breast cancer
Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer.
SNP rs rs3803662
Pubmed ID 17529974
P-Value 6 X 10-19
Trait Breast cancer
A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).
SNP rs rs3803662
Pubmed ID 19330030
P-Value 1 X 10-09
Trait Breast cancer
Genome-wide association study identifies five new breast cancer susceptibility loci
SNP rs rs3803662
Pubmed ID 20453838
P-Value 3 X 10-15
Trait Breast cancer
Identification of a functional genetic variant at 16q12.1 for breast cancer risk: results from the Asia Breast Cancer Consortium
SNP rs rs4784227
Pubmed ID 20585626
P-Value 1 X 10-28
Trait Breast cancer
Gene MCTP1
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs17418283
Pubmed ID 19416921
P-Value 1 X 10-07
Trait Bipolar disorder
Gene CELSR2
Biological, clinical and population relevance of 95 loci for blood lipids
SNP rs rs629301
Pubmed ID 20686565
P-Value 1 X 10-170
Trait Blood lipid traits
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs646776
Pubmed ID 18193044
P-Value 3 X 10-29
Trait LDL cholesterol
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
SNP rs rs646776
Pubmed ID 19060910
P-Value 2 X 10-12
Trait LDL cholesterol
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs646776
Pubmed ID 19060911
P-Value 9 X 10-22
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs646776
Pubmed ID 19060911
P-Value 8 X 10-23
Trait LDL cholesterol
Genome-wide association of early-onset myocardial infarction with single nucleotide polymorphisms and copy number variants.
SNP rs rs646776
Pubmed ID 19198609
P-Value 8 X 10-12
Trait Myocardial infarction (early onset)
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs646776
Pubmed ID 20339536
P-Value 4 X 10-06
Trait Response to statin therapy
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs12740374
Pubmed ID 19060906
P-Value 2 X 10-42
Trait LDL cholesterol
Gene PPARG
Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.
SNP rs rs1801282
Pubmed ID 17463246
P-Value 2 X 10-06
Trait Type 2 diabetes
A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants.
SNP rs rs1801282
Pubmed ID 17463248
P-Value 2 X 10-06
Trait Type 2 diabetes
Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes.
SNP rs rs1801282
Pubmed ID 17463249
P-Value 2 X 10-06
Trait Type 2 diabetes
Gene KATNAL1
Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2
SNP rs rs9314986
Pubmed ID 20460270
P-Value 2 X 10-06
Trait Biliary atresia
Gene ATG16L1
Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis.
SNP rs rs2241880
Pubmed ID 17435756
P-Value 1 X 10-13
Trait Crohn's disease
Fucosyltransferase 2(FUT2) Non-Secretor Status is associated with Crohn's Disease
SNP rs rs2241880
Pubmed ID 20570966
P-Value 3 X 10-06
Trait Crohn's disease
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs3828309
Pubmed ID 18587394
P-Value 2 X 10-32
Trait Crohn's disease
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs10210302
Pubmed ID 17554300
P-Value 5 X 10-14
Trait Crohn's disease
Gene TSN
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs17367118
Pubmed ID 18821565
P-Value 9 X 10-06
Trait Attention deficit hyperactivity disorder
Gene CBLB
Variants within the immunoregulatory CBLB gene are associated with multiple sclerosis
SNP rs rs9657904
Pubmed ID 20453840
P-Value 2 X 10-10
Trait Multiple sclerosis
Gene LRP5
Twenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
SNP rs rs599083
Pubmed ID 19801982
P-Value 5 X 10-08
Trait Bone mineral density (spine)
Bone mineral density, osteoporosis, and osteoporotic fractures: a genome-wide association study.
SNP rs rs3736228
Pubmed ID 18455228
P-Value 6 X 10-12
Trait Bone mineral density
Gene PBRM1
Meta-analysis of genome-wide association data identifies a risk locus for major mood disorders on 3p21.1.
SNP rs rs2251219
Pubmed ID 20081856
P-Value 2 X 10-09
Trait Major mood disorders
Gene NAPRT1
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs2290416
Pubmed ID 18821565
P-Value 9 X 10-06
Trait Attention deficit hyperactivity disorder
Gene KIAA1486
Genome-wide association scan of the time to onset of attention deficit hyperactivity disorder.
SNP rs rs1517484
Pubmed ID 18937294
P-Value 5 X 10-07
Trait Attention deficit hyperactivity disorder (time to onset)
Genomewide association analysis of coronary artery disease.
SNP rs rs2943634
Pubmed ID 17634449
P-Value 2 X 10-07
Trait Coronary heart disease
Genetic variant near IRS1 is associated with type 2 diabetes, insulin resistance and hyperinsulinemia.
SNP rs rs2943641
Pubmed ID 19734900
P-Value 9 X 10-12
Trait Type 2 diabetes and other traits
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs7578326
Pubmed ID 20581827
P-Value 5 X 10-20
Trait Type 2 diabetes
Gene SEMA5A
High-resolution whole-genome association study of Parkinson disease.
SNP rs rs7702187
Pubmed ID 16252231
P-Value 8 X 10-06
Trait Parkinson's disease
Gene SEZ6L
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs688034
Pubmed ID 17554300
P-Value 4 X 10-06
Trait Coronary heart disease
Gene OPTN
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs525455
Pubmed ID 20526338
P-Value 7 X 10-07
Trait Platelet aggregation
Genome-wide association study identifies variants at CSF1, OPTN and TNFRSF11A as genetic risk factors for Paget's disease of bone
SNP rs rs1561570
Pubmed ID 20436471
P-Value 6 X 10-13
Trait Paget's disease
Gene BSN
Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility.
SNP rs rs9858542
Pubmed ID 17554261
P-Value 5 X 10-08
Trait Crohn's disease
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs9858542
Pubmed ID 17554300
P-Value 4 X 10-08
Trait Crohn's disease
Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region.
SNP rs rs9858542
Pubmed ID 19915572
P-Value 7 X 10-09
Trait Ulcerative colitis
Gene MIR17HG
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs8002779
Pubmed ID 20189936
P-Value 3 X 10-06
Trait Height
Gene KIAA1609
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs371915
Pubmed ID 20208534
P-Value 2 X 10-08
Trait Eosinophilic esophagitis (pediatric)
Gene TET2
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs7679673
Pubmed ID 19767753
P-Value 3 X 10-14
Trait Prostate cancer
Gene MSRA
Genome-wide association study of blood pressure and hypertension.
SNP rs rs11775334
Pubmed ID 19430479
P-Value 4 X 10-06
Trait Hypertension
Alzheimer disease pathology in cognitively healthy elderly: A genome-wide study
SNP rs rs11782819
Pubmed ID 20452100
P-Value 3 X 10-06
Trait Alzheimer's disease
Gene MUC1
Genome-Wide Association Studies of Serum Magnesium, Potassium, and Sodium Concentrations Identify Six Loci Influencing Serum Magnesium Levels
SNP rs rs4072037
Pubmed ID 20700443
P-Value 2 X 10-36
Trait Serum magnesium levels
Gene SLC24A4
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs12896399
Pubmed ID 17952075
P-Value 1 X 10-48
Trait Blond vs. brown hair color
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs12896399
Pubmed ID 17952075
P-Value 4 X 10-38
Trait Blue vs. green eyes
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs12896399
Pubmed ID 18483556
P-Value 8 X 10-21
Trait Black vs. blond hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 5 X 10-13
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 1 X 10-16
Trait Eye color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 2 X 10-23
Trait Eye color
Gene KLF12
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs1886449
Pubmed ID 20686608
P-Value 9 X 10-06
Trait Pancreatic cancer
Genome-wide association identifies ATOH7 as a major gene determining human optic disc size
SNP rs rs8000245
Pubmed ID 20395239
P-Value 8 X 10-06
Trait Optic disc size (rim)
A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33.
SNP rs rs9543325
Pubmed ID 20101243
P-Value 3 X 10-11
Trait Pancreatic cancer
Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population
SNP rs rs9600079
Pubmed ID 20676098
P-Value 3 X 10-09
Trait Prostate cancer
Gene RAD51L1
A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1).
SNP rs rs999737
Pubmed ID 19330030
P-Value 2 X 10-07
Trait Breast cancer
Genome-wide association study reveals multiple loci associated with primary tooth development during infancy.
SNP rs rs1956529
Pubmed ID 20195514
P-Value 3 X 10-08
Trait Primary tooth development (number of teeth)
Gene PAFAH1B2
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs7112513
Pubmed ID 18464913
P-Value 6 X 10-09
Trait Protein quantitative trait loci
Gene USP25
Genome-wide association study of panic disorder in the Japanese population.
SNP rs rs2823455
Pubmed ID 19165232
P-Value 9 X 10-06
Trait Panic disorder
Gene LPHN2
Genome-Wide Scan of Copy Number Variation in Late-Onset Alzheimer's Disease.
SNP rs rs7539409
Pubmed ID 19749422
P-Value 1 X 10-06
Trait Alzheimer's disease
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs7552393
Pubmed ID 17903293
P-Value 5 X 10-07
Trait Select biomarker traits
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs11163585
Pubmed ID 20195266
P-Value 9 X 10-07
Trait Response to antipsychotic treatment
Gene DPY19L3
Genome-wide association study of bipolar disorder in European American and African American individuals.
SNP rs rs2111504
Pubmed ID 19488044
P-Value 2 X 10-06
Trait Bipolar disorder
Gene NUMB
Genome-wide association study for subclinical atherosclerosis in major arterial territories in the NHLBI's Framingham Heart Study.
SNP rs rs10483853
Pubmed ID 17903303
P-Value 6 X 10-06
Trait Coronary artery calcification
Gene SCGN
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs932316
Pubmed ID 19084217
P-Value 9 X 10-06
Trait Serum markers of iron status
Gene SUSD1
Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data.
SNP rs rs2782931
Pubmed ID 17362836
P-Value 6 X 10-06
Trait Amyotrophic lateral sclerosis
Gene XYLB
Genome-wide association study of electrocardiographic conduction measures in an isolated founder population: Kosrae.
SNP rs rs2070488
Pubmed ID 19389651
P-Value 4 X 10-06
Trait Electrocardiographic conduction measures
Gene LCORL
Many sequence variants affecting diversity of adult human height.
SNP rs rs6830062
Pubmed ID 18391951
P-Value 1 X 10-10
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs6830062
Pubmed ID 19343178
P-Value 5 X 10-09
Trait Height
Genome-Wide Association Study of Height and Body Mass Index in Australian Twin Families
SNP rs rs6830062
Pubmed ID 20397748
P-Value 8 X 10-06
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs16896068
Pubmed ID 18391952
P-Value 2 X 10-13
Trait Height
Gene HJURP
Genetic Signatures of Exceptional Longevity in Humans
SNP rs rs579327
Pubmed ID 20595579
P-Value 7 X 10-08
Trait Longevity
Gene STX8
Genetic Signatures of Exceptional Longevity in Humans
SNP rs rs10521157
Pubmed ID 20595579
P-Value 1 X 10-08
Trait Longevity
Gene CHCHD7
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs7815788
Pubmed ID 19343178
P-Value 5 X 10-06
Trait Height
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs9650315
Pubmed ID 18391950
P-Value 4 X 10-07
Trait Height
Gene PHB
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs1035050
Pubmed ID 19416921
P-Value 9 X 10-06
Trait Bipolar disorder
Gene GABRG1
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs10938397
Pubmed ID 19079261
P-Value 3 X 10-16
Trait Body mass index
Gene PIGU
Common sequence variants on 20q11.22 confer melanoma susceptibility.
SNP rs rs910873
Pubmed ID 18488026
P-Value 1 X 10-15
Trait Melanoma
Gene SYPL2
New loci associated with kidney function and chronic kidney disease
SNP rs rs1933182
Pubmed ID 20383146
P-Value 1 X 10-07
Trait Chronic kidney disease
Gene RPL5
Risk alleles for multiple sclerosis identified by a genomewide study.
SNP rs rs6604026
Pubmed ID 17660530
P-Value 8 X 10-06
Trait Multiple sclerosis
Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.
SNP rs rs6604026
Pubmed ID 19525955
P-Value 3 X 10-06
Trait Multiple sclerosis
Gene FHOD3
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs17651157
Pubmed ID 20195266
P-Value 1 X 10-07
Trait Response to antipsychotic treatment
Gene C1GALT1
Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
SNP rs rs10259085
Pubmed ID 19010793
P-Value 4 X 10-06
Trait Multiple sclerosis (severity)
Gene ZBTB38
Common variants in the GDF5-UQCC region are associated with variation in human height.
SNP rs rs724016
Pubmed ID 18193045
P-Value 1 X 10-06
Trait Height
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs724016
Pubmed ID 18391950
P-Value 8 X 10-22
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs6440003
Pubmed ID 18391952
P-Value 2 X 10-24
Trait Height
Many sequence variants affecting diversity of adult human height.
SNP rs rs6763931
Pubmed ID 18391951
P-Value 1 X 10-27
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs6763931
Pubmed ID 19343178
P-Value 3 X 10-12
Trait Height
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs9825379
Pubmed ID 20189936
P-Value 6 X 10-09
Trait Height
A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.
SNP rs rs10513137
Pubmed ID 19396169
P-Value 6 X 10-12
Trait Height
Identification of 15 loci influencing height in a Korean population.
SNP rs rs10513137
Pubmed ID 19893584
P-Value 8 X 10-08
Trait Height
Gene UBE2Q2
New loci associated with kidney function and chronic kidney disease
SNP rs rs1394125
Pubmed ID 20383146
P-Value 3 X 10-17
Trait Chronic kidney disease
Gene DYNLRB2
Genome-wide association study for early-onset and morbid adult obesity identifies three new risk loci in European populations.
SNP rs rs1424233
Pubmed ID 19151714
P-Value 4 X 10-13
Trait Obesity
Gene MAP4K5
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs1265879
Pubmed ID 20125193
P-Value 4 X 10-06
Trait Cognitive test performance
Gene FAM184B
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs7678436
Pubmed ID 20189936
P-Value 8 X 10-15
Trait Height
Gene TCF4
Common variants conferring risk of schizophrenia.
SNP rs rs9960767
Pubmed ID 19571808
P-Value 4 X 10-09
Trait Schizophrenia
Common polygenic variation contributes to risk of schizophrenia and bipolar disorder
SNP rs rs17594526
Pubmed ID 19571811
P-Value 1 X 10-07
Trait Schizophrenia
Gene DDX6
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs4639966
Pubmed ID 19838193
P-Value 1 X 10-16
Trait Systemic lupus erythematosus
Gene SPAG17
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs12735613
Pubmed ID 18391952
P-Value 4 X 10-11
Trait Height
A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.
SNP rs rs17038182
Pubmed ID 19396169
P-Value 5 X 10-07
Trait Height
Gene ZNF746
Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
SNP rs rs855913
Pubmed ID 19451621
P-Value 4 X 10-08
Trait Amyotrophic lateral sclerosis
Gene RPS26P6
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs931812
Pubmed ID 18951430
P-Value 5 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03).
SNP rs rs3108919
Pubmed ID 19754311
P-Value 4 X 10-06
Trait AIDS
Gene SH3D20
Genome-wide association study confirms SNPs in SNCA and the MAPT region as common risk factors for Parkinson disease.
SNP rs rs11012
Pubmed ID 20070850
P-Value 6 X 10-08
Trait Parkinson's disease
Gene FAM18B
Genome-wide association study of pancreatic cancer in Japanese population
SNP rs rs4924935
Pubmed ID 20686608
P-Value 8 X 10-06
Trait Pancreatic cancer
Gene MPHOSPH9
Meta-analysis of genome scans and replication identify CD6, IRF8 and TNFRSF1A as new multiple sclerosis susceptibility loci.
SNP rs rs1790100
Pubmed ID 19525953
P-Value 7 X 10-07
Trait Multiple sclerosis
Gene PSMA5
New loci associated with kidney function and chronic kidney disease
SNP rs rs1933182
Pubmed ID 20383146
P-Value 1 X 10-07
Trait Chronic kidney disease
Gene C10orf107
Genome-wide association study identifies eight loci associated with blood pressure.
SNP rs rs1530440
Pubmed ID 19430483
P-Value 1 X 10-09
Trait Diastolic blood pressure
Gene DLK1
Genome-wide association identifies ATOH7 as a major gene determining human optic disc size
SNP rs rs1884537
Pubmed ID 20395239
P-Value 2 X 10-06
Trait Optic disc size (disc)
Gene CASZ1
Genome-wide association study of blood pressure and hypertension.
SNP rs rs12046278
Pubmed ID 19430479
P-Value 5 X 10-06
Trait Systolic blood pressure
Gene CFHR3
Genome-wide association study identifies variants in the CFH region associated with host susceptibility to meningococcal disease
SNP rs rs426736
Pubmed ID 20694013
P-Value 5 X 10-13
Trait Meningococcal disease
Gene RPL26P11
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs2205960
Pubmed ID 19838193
P-Value 3 X 10-32
Trait Systemic lupus erythematosus
Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci.
SNP rs rs10798269
Pubmed ID 18204446
P-Value 1 X 10-07
Trait Systemic lupus erythematosus
Gene USP31
Genome-wide association study identifies new multiple sclerosis susceptibility loci on chromosomes 12 and 20.
SNP rs rs8049603
Pubmed ID 19525955
P-Value 1 X 10-06
Trait Multiple sclerosis
Gene CRADD
Many sequence variants affecting diversity of adult human height.
SNP rs rs3825199
Pubmed ID 18391951
P-Value 2 X 10-07
Trait Height
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs11107116
Pubmed ID 18391952
P-Value 6 X 10-10
Trait Height
Gene C14orf179
Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness
SNP rs rs935334
Pubmed ID 17903302
P-Value 3 X 10-06
Trait Blood pressure
Gene TDRD9
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs11622475
Pubmed ID 17554300
P-Value 8 X 10-06
Trait Bipolar disorder
Gene SYN3
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration
SNP rs rs9621532
Pubmed ID 20385819
P-Value 1 X 10-11
Trait Age-related macular degeneration
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs9621532
Pubmed ID 20385826
P-Value 4 X 10-09
Trait Age-related macular degeneration
Gene NLRP11
Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
SNP rs rs299175
Pubmed ID 19010793
P-Value 4 X 10-06
Trait Multiple sclerosis (severity)
Gene MEX3B
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs12324805
Pubmed ID 19079261
P-Value 7 X 10-06
Trait Body mass index
Gene SDK1
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs6462411
Pubmed ID 19197348
P-Value 1 X 10-06
Trait Quantitative traits
Gene ABCG5
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs6756629
Pubmed ID 19060911
P-Value 2 X 10-11
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs6756629
Pubmed ID 19060911
P-Value 3 X 10-10
Trait LDL cholesterol
A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease.
SNP rs rs11887534
Pubmed ID 17632509
P-Value 1 X 10-14
Trait Gallstones
Gene RPL41P1
Male-pattern baldness susceptibility locus at 20p11.
SNP rs rs1160312
Pubmed ID 18849991
P-Value 1 X 10-14
Trait Male-pattern baldness
Susceptibility variants for male-pattern baldness on chromosome 20p11.
SNP rs rs2180439
Pubmed ID 18849994
P-Value 3 X 10-15
Trait Male-pattern baldness
Gene PARP15
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs2650951
Pubmed ID 20031603
P-Value 1 X 10-06
Trait QT interval
Gene IRF5
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs4728142
Pubmed ID 19838193
P-Value 8 X 10-19
Trait Systemic lupus erythematosus
Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX.
SNP rs rs10488631
Pubmed ID 18204098
P-Value 2 X 10-11
Trait Systemic lupus erythematosus
Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.
SNP rs rs10488631
Pubmed ID 19458352
P-Value 2 X 10-07
Trait Primary biliary cirrhosis
Genome-wide association study of systemic sclerosis identifies CD247 as a new susceptibility locus
SNP rs rs10488631
Pubmed ID 20383147
P-Value 2 X 10-13
Trait Systemic sclerosis
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs10488631
Pubmed ID 20453842
P-Value 4 X 10-11
Trait Rheumatoid arthritis
Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis
SNP rs rs10488631
Pubmed ID 20639880
P-Value 3 X 10-10
Trait Primary biliary cirrhosis
Gene RXRB
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs2254287
Pubmed ID 18193043
P-Value 5 X 10-08
Trait LDL cholesterol
Gene MOSPD3
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs7786877
Pubmed ID 19862010
P-Value 3 X 10-11
Trait Mean corpuscular volume
Gene GALNT2
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs2144300
Pubmed ID 18193043
P-Value 3 X 10-14
Trait HDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs2144300
Pubmed ID 18193043
P-Value 8 X 10-07
Trait Triglycerides
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs4846914
Pubmed ID 18193044
P-Value 2 X 10-13
Trait HDL cholesterol
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs4846914
Pubmed ID 18193044
P-Value 7 X 10-15
Trait Triglycerides
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs4846914
Pubmed ID 19060906
P-Value 4 X 10-08
Trait HDL cholesterol
Gene C9orf130
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs11790994
Pubmed ID 18821565
P-Value 2 X 10-07
Trait Inattentive symptoms
Gene PALB2
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs420259
Pubmed ID 17554300
P-Value 6 X 10-08
Trait Bipolar disorder
Gene FA2H
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs16948255
Pubmed ID 20041166
P-Value 1 X 10-06
Trait HIV-1 control
Gene PVRL2
A genome-wide association study for late-onset Alzheimer's disease using DNA pooling.
SNP rs rs6859
Pubmed ID 18823527
P-Value 6 X 10-14
Trait Alzheimer's disease
Gene SCG5
A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3.
SNP rs rs4779584
Pubmed ID 18372905
P-Value 5 X 10-07
Trait Colorectal cancer
Gene CSF1
Genome-wide association study identifies variants at CSF1, OPTN and TNFRSF11A as genetic risk factors for Paget's disease of bone
SNP rs rs484959
Pubmed ID 20436471
P-Value 5 X 10-24
Trait Paget's disease
Gene ACAN
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs8041863
Pubmed ID 18391952
P-Value 8 X 10-08
Trait Height
Gene ZDHHC7
Many sequence variants affecting diversity of adult human height.
SNP rs rs2326458
Pubmed ID 18391951
P-Value 8 X 10-07
Trait Height
Gene PRMT7
Genome-Wide Association Studies of Serum Magnesium, Potassium, and Sodium Concentrations Identify Six Loci Influencing Serum Magnesium Levels
SNP rs rs7197653
Pubmed ID 20700443
P-Value 2 X 10-06
Trait Serum magnesium levels
Gene ZNF652
Genome-wide association study identifies eight loci associated with blood pressure.
SNP rs rs16948048
Pubmed ID 19430483
P-Value 5 X 10-09
Trait Diastolic blood pressure
Gene RNF146
Genome-wide association study provides evidence for a breast cancer risk locus at 6q22.33.
SNP rs rs2180341
Pubmed ID 18326623
P-Value 3 X 10-08
Trait Breast cancer
Gene HIBADH
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs13225783
Pubmed ID 20445134
P-Value 7 X 10-06
Trait Heart failure
Gene TMEM18
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs4643574
Pubmed ID 20125193
P-Value 5 X 10-06
Trait Cognitive test performance
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
SNP rs rs6548238
Pubmed ID 19079261
P-Value 1 X 10-18
Trait Body mass index
Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity.
SNP rs rs7561317
Pubmed ID 19079260
P-Value 2 X 10-18
Trait Weight
Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity.
SNP rs rs7561317
Pubmed ID 19079260
P-Value 4 X 10-17
Trait Body mass index
Gene PAPD4
Genome-Wide Association-, Replication-, and Neuroimaging Study Implicates HOMER1 in the Etiology of Major Depression.
SNP rs rs7713917
Pubmed ID 20673876
P-Value 1 X 10-06
Trait Major depressive disorder
Gene CFH
Complement factor H polymorphism in age-related macular degeneration.
SNP rs rs380390
Pubmed ID 15761122
P-Value 4 X 10-08
Trait Age-related macular degeneration
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs1061170
Pubmed ID 20385826
P-Value 4 X 10-117
Trait Age-related macular degeneration
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration
SNP rs rs1329424
Pubmed ID 20385819
P-Value 6 X 10-16
Trait Age-related macular degeneration
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs1410996
Pubmed ID 20385826
P-Value 2 X 10-111
Trait Age-related macular degeneration
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration
SNP rs rs10737680
Pubmed ID 20385819
P-Value 2 X 10-76
Trait Age-related macular degeneration
Gene MRPL39
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs17001239
Pubmed ID 19734545
P-Value 2 X 10-06
Trait Cognitive performance
Gene GHITM
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs2224865
Pubmed ID 20208534
P-Value 9 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Gene ABP1
Common variants at ten loci modulate the QT interval duration in the QTSCD Study.
SNP rs rs2968863
Pubmed ID 19305409
P-Value 2 X 10-15
Trait QT interval
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs2968864
Pubmed ID 19305408
P-Value 8 X 10-16
Trait QT interval
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs4725982
Pubmed ID 19305408
P-Value 5 X 10-16
Trait QT interval
Genetic variation in SCN10A influences cardiac conduction.
SNP rs rs4725982
Pubmed ID 20062061
P-Value 3 X 10-06
Trait Electrocardiographic traits
Gene CTDSPL
A genome-wide association study of breast and prostate cancer in the NHLBI's Framingham Heart Study.
SNP rs rs9311171
Pubmed ID 17903305
P-Value 2 X 10-06
Trait Prostate cancer
Gene RRAGC
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs12131057
Pubmed ID 20453842
P-Value 4 X 10-07
Trait Rheumatoid arthritis
Gene MOSC2
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs337161
Pubmed ID 19875103
P-Value 3 X 10-06
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs1494373
Pubmed ID 19875103
P-Value 6 X 10-06
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Gene RASGRP3
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs13385731
Pubmed ID 19838193
P-Value 1 X 10-15
Trait Systemic lupus erythematosus
Gene CCNL1
Variants in ADCY5 and near CCNL1 are associated with fetal growth and birth weight
SNP rs rs900400
Pubmed ID 20372150
P-Value 2 X 10-35
Trait Birth weight
Gene SEZ6L2
Genome-wide association study of anthropometric traits in Korcula Island, Croatia.
SNP rs rs4787483
Pubmed ID 19260139
P-Value 2 X 10-06
Trait Anthropometric traits
Gene ATP6V1B2
Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.
SNP rs rs1106634
Pubmed ID 20038947
P-Value 7 X 10-07
Trait Major depressive disorder (broad)
Gene DUSP22
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs1033180
Pubmed ID 20190752
P-Value 6 X 10-08
Trait Celiac disease
Gene OTOS
A genome-wide association study of schizophrenia using brain activation as a quantitative phenotype.
SNP rs rs1574192
Pubmed ID 19023125
P-Value 4 X 10-06
Trait Brain imaging in schizophrenia (interaction)
Gene CTNNA2
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs399885
Pubmed ID 20195266
P-Value 5 X 10-07
Trait Response to antipsychotic treatment
Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs
SNP rs rs7570469
Pubmed ID 20195266
P-Value 6 X 10-07
Trait Response to antipsychotic treatment
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs11695685
Pubmed ID 18464913
P-Value 5 X 10-07
Trait Protein quantitative trait loci
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs13409348
Pubmed ID 19416921
P-Value 3 X 10-06
Trait Bipolar disorder
Gene THUMPD2
Genome-wide association scan for five major dimensions of personality.
SNP rs rs2540226
Pubmed ID 18957941
P-Value 3 X 10-06
Trait Personality dimensions
Gene ZNF608
Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
SNP rs rs11241713
Pubmed ID 19451621
P-Value 3 X 10-06
Trait Amyotrophic lateral sclerosis
Gene ZNF493
Genome-wide association study of acute post-surgical pain in humans.
SNP rs rs2562456
Pubmed ID 19207018
P-Value 2 X 10-10
Trait Pain
Gene ORMDL3
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs17609240
Pubmed ID 19820697
P-Value 9 X 10-09
Trait Hematological parameters
Gene DOCK10
Genome-wide association scan of the time to onset of attention deficit hyperactivity disorder.
SNP rs rs1517484
Pubmed ID 18937294
P-Value 5 X 10-07
Trait Attention deficit hyperactivity disorder (time to onset)
Gene FGGY
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs4601609
Pubmed ID 19734545
P-Value 5 X 10-06
Trait Cognitive performance
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs17119280
Pubmed ID 19875103
P-Value 7 X 10-06
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Gene DNAJB6
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs2527866
Pubmed ID 19197348
P-Value 3 X 10-06
Trait Quantitative traits
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs10227331
Pubmed ID 18821565
P-Value 4 X 10-06
Trait Inattentive symptoms
Gene LMO4
Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis.
SNP rs rs983332
Pubmed ID 18615156
P-Value 5 X 10-06
Trait Response to TNF antagonist treatment
Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study.
SNP rs rs2179965
Pubmed ID 17903297
P-Value 1 X 10-06
Trait Cognitive test performance
Genome-wide and candidate gene association study of cigarette smoking behaviors.
SNP rs rs7553864
Pubmed ID 19247474
P-Value 3 X 10-06
Trait Smoking behavior
Gene SLC17A1
Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations.
SNP rs rs1183201
Pubmed ID 19503597
P-Value 3 X 10-14
Trait Serum uric acid
Sequence variants in three loci influence monocyte counts and erythrocyte volume
SNP rs rs1408272
Pubmed ID 19853236
P-Value 1 X 10-11
Trait Hematology traits
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs1408272
Pubmed ID 19862010
P-Value 4 X 10-39
Trait Mean corpuscular hemoglobin
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs17270561
Pubmed ID 19084217
P-Value 5 X 10-07
Trait Serum markers of iron status
Gene SRR
A genome-wide association study identifies susceptibility variants for type 2 diabetes in Han Chinese.
SNP rs rs391300
Pubmed ID 20174558
P-Value 3 X 10-09
Trait Type 2 diabetes
Gene LPHN1
Genomic Variation Associated with Mortality among Adults of European and African Ancestry with Heart Failure: The CHARGE Consortium
SNP rs rs4528684
Pubmed ID 20400778
P-Value 1 X 10-06
Trait Mortality among heart failure patients
Gene TREH
Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus.
SNP rs rs4639966
Pubmed ID 19838193
P-Value 1 X 10-16
Trait Systemic lupus erythematosus
Gene WDR36
Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction.
SNP rs rs2416257
Pubmed ID 19198610
P-Value 1 X 10-06
Trait Plasma eosinophil count
Gene THSD4
Genome-wide association study identifies five loci associated with lung function.
SNP rs rs12899618
Pubmed ID 20010834
P-Value 7 X 10-15
Trait Pulmonary function
Gene FGF12
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.
SNP rs rs4453795
Pubmed ID 19043545
P-Value 4 X 10-07
Trait Serum metabolites
Genome-wide pharmacogenomic analysis of response to treatment with antipsychotics.
SNP rs rs7635839
Pubmed ID 19721433
P-Value 3 X 10-06
Trait Response to antipsychotic treatment
Gene PTCH1
Genome-wide association analysis identifies 20 loci that influence adult height.
SNP rs rs10512248
Pubmed ID 18391952
P-Value 4 X 10-11
Trait Height
Chemerin, a Novel Adipokine in the Regulation of Angiogenesis
SNP rs rs10988802
Pubmed ID 20237162
P-Value 4 X 10-06
Trait Plasma chemerin levels
Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.
SNP rs rs16909898
Pubmed ID 20010835
P-Value 5 X 10-07
Trait Pulmonary function
Gene PAQR4
A genome-wide association study of the metabolic syndrome in Indian Asian men
SNP rs rs886427
Pubmed ID 20694148
P-Value 6 X 10-06
Trait Metabolic syndrome
Gene PTPN22
Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.
SNP rs rs2476601
Pubmed ID 17554260
P-Value 2 X 10-80
Trait Type 1 diabetes
A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene
SNP rs rs2476601
Pubmed ID 17632545
P-Value 1 X 10-07
Trait Type 1 diabetes
TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study.
SNP rs rs2476601
Pubmed ID 17804836
P-Value 2 X 10-11
Trait Rheumatoid arthritis
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs2476601
Pubmed ID 18587394
P-Value 1 X 10-08
Trait Crohn's disease
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs2476601
Pubmed ID 19430480
P-Value 9 X 10-85
Trait Type 1 diabetes
REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis.
SNP rs rs2476601
Pubmed ID 19503088
P-Value 2 X 10-21
Trait Rheumatoid arthritis
Variant of TYR and Autoimmunity Susceptibility Loci in Generalized Vitiligo
SNP rs rs2476601
Pubmed ID 20410501
P-Value 1 X 10-07
Trait Vitiligo
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs2476601
Pubmed ID 20453842
P-Value 9 X 10-74
Trait Rheumatoid arthritis
Gene SERP2
Association of a common nonsynonymous variant in GLUT9 with serum uric acid levels in old order amish.
SNP rs rs17065323
Pubmed ID 18759275
P-Value 4 X 10-06
Trait Serum uric acid
Gene HCG22
Genetic variants at 6p21.33 are associated with susceptibility to follicular lymphoma.
SNP rs rs6457327
Pubmed ID 19620980
P-Value 5 X 10-11
Trait Follicular lymphoma
Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32
SNP rs rs6457327
Pubmed ID 20639881
P-Value 7 X 10-06
Trait Follicular lymphoma
Gene GSDMA
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs17609240
Pubmed ID 19820697
P-Value 9 X 10-09
Trait Hematological parameters
Gene TMEM57
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs10903129
Pubmed ID 19060911
P-Value 5 X 10-10
Trait Cholesterol, total
Gene EIF3H
A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3.
SNP rs rs16892766
Pubmed ID 18372905
P-Value 3 X 10-18
Trait Colorectal cancer
Gene IL12B
Genome-wide scan reveals association of psoriasis with IL-23 and NF-kappaB pathways.
SNP rs rs2082412
Pubmed ID 19169254
P-Value 2 X 10-28
Trait Psoriasis
Psoriasis genome-wide association study identifies susceptibility variants within LCE gene cluster at 1q21.
SNP rs rs3213094
Pubmed ID 19169255
P-Value 3 X 10-26
Trait Psoriasis
Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility.
SNP rs rs6887695
Pubmed ID 17554261
P-Value 9 X 10-06
Trait Crohn's disease
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs10045431
Pubmed ID 18587394
P-Value 4 X 10-13
Trait Crohn's disease
Fucosyltransferase 2(FUT2) Non-Secretor Status is associated with Crohn's Disease
SNP rs rs10045431
Pubmed ID 20570966
P-Value 7 X 10-08
Trait Crohn's disease
Gene ATP13A2
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs3738814
Pubmed ID 20189936
P-Value 2 X 10-07
Trait Height
Gene NEURL
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs7071247
Pubmed ID 20526338
P-Value 2 X 10-07
Trait Platelet aggregation
Gene SF4
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs10401969
Pubmed ID 19060906
P-Value 2 X 10-08
Trait LDL cholesterol
Gene SMAD3
Genomewide association analysis of coronary artery disease.
SNP rs rs17228212
Pubmed ID 17634449
P-Value 2 X 10-07
Trait Coronary heart disease
Gene SLC38A11
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs776488
Pubmed ID 20585627
P-Value 2 X 10-07
Trait Common traits (Other)
Gene NRG3
A genome-wide association study of carotid atherosclerosis in HIV-infected men.
SNP rs rs588517
Pubmed ID 20009918
P-Value 8 X 10-06
Trait Carotid atherosclerosis in HIV infection
Common variants at 5q22 associate with pediatric eosinophilic esophagitis.
SNP rs rs2224865
Pubmed ID 20208534
P-Value 9 X 10-06
Trait Eosinophilic esophagitis (pediatric)
Whole genome association study identifies polymorphisms associated with QT prolongation during iloperidone treatment of schizophrenia.
SNP rs rs4933824
Pubmed ID 18521091
P-Value 2 X 10-06
Trait Response to iloperidone treatment (QT prolongation)
Gene RBBP8
Genome-wide association study of intracranial aneurysm identifies three new risk loci
SNP rs rs11661542
Pubmed ID 20364137
P-Value 1 X 10-12
Trait Intracranial aneurysm
Gene PSMD3
Common variations in PSMD3-CSF3 and PLCB4 are associated with neutrophil count.
SNP rs rs4794822
Pubmed ID 20172861
P-Value 6 X 10-10
Trait Neutrophil count
Gene C20orf30
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs261360
Pubmed ID 19896111
P-Value 3 X 10-06
Trait Hair morphology
Gene C12orf28
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
SNP rs rs789560
Pubmed ID 18951430
P-Value 7 X 10-06
Trait Attention deficit hyperactivity disorder and conduct disorder
Gene VRK2
Common variants conferring risk of schizophrenia.
SNP rs rs2312147
Pubmed ID 19571808
P-Value 3 X 10-07
Trait Schizophrenia
Gene ADAMTS14
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
SNP rs rs1816002
Pubmed ID 19851299
P-Value 8 X 10-06
Trait Weight
Gene HIF1AN
Genome-Wide Scan of Copy Number Variation in Late-Onset Alzheimer's Disease.
SNP rs rs4509693
Pubmed ID 19749422
P-Value 6 X 10-06
Trait Alzheimer's disease
Gene SYNE1
Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness
SNP rs rs1322512
Pubmed ID 17903302
P-Value 8 X 10-06
Trait Tonometry
Collaborative genome-wide association analysis supports a role for ANK3 and CACNA1C in bipolar disorder.
SNP rs rs17082664
Pubmed ID 18711365
P-Value 4 X 10-06
Trait Bipolar disorder
Meta-analysis of genome-wide association data of bipolar disorder and major depressive disorder
SNP rs rs17082664
Pubmed ID 20351715
P-Value 1 X 10-06
Trait Bipolar disorder and major depressive disorder (combined)
Gene CYP27C1
A genome-wide association study of self-rated health
SNP rs rs7567389
Pubmed ID 20707712
P-Value 2 X 10-06
Trait Self-rated health
Gene OTUD7A
Genomic Variation Associated with Mortality among Adults of European and African Ancestry with Heart Failure: The CHARGE Consortium
SNP rs rs2125623
Pubmed ID 20400778
P-Value 1 X 10-06
Trait Mortality among heart failure patients
Gene C17orf62
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs9303029
Pubmed ID 18464913
P-Value 4 X 10-07
Trait Protein quantitative trait loci
Gene CHRNA3
A variant associated with nicotine dependence, lung cancer and peripheral arterial disease.
SNP rs rs1051730
Pubmed ID 18385739
P-Value 6 X 10-20
Trait Nicotine dependence
Lung cancer susceptibility locus at 5p15.33.
SNP rs rs1051730
Pubmed ID 18978790
P-Value 1 X 10-15
Trait Lung cancer
A genome-wide association study of lung cancer identifies a region of chromosome 5p15 associated with risk for adenocarcinoma.
SNP rs rs1051730
Pubmed ID 19836008
P-Value 2 X 10-51
Trait Lung adenocarcinoma
Sequence variants at CHRNB3-CHRNA6 and CYP2A6 affect smoking behavior
SNP rs rs1051730
Pubmed ID 20418888
P-Value 2 X 10-69
Trait Smoking behavior
Meta-analysis and imputation refines the association of 15q25 with smoking quantity
SNP rs rs1051730
Pubmed ID 20418889
P-Value 2 X 10-66
Trait Smoking behavior
Genome-wide meta-analyses identify multiple loci associated with smoking behavior
SNP rs rs1051730
Pubmed ID 20418890
P-Value 3 X 10-73
Trait Smoking behavior
Common 5p15.33 and 6p21.33 variants influence lung cancer risk.
SNP rs rs8042374
Pubmed ID 18978787
P-Value 8 X 10-12
Trait Lung cancer
Gene PARD3
Germline genomic variants associated with childhood acute lymphoblastic leukemia.
SNP rs rs563507
Pubmed ID 19684603
P-Value 9 X 10-06
Trait Acute lymphoblastic leukemia (childhood)
Gene ATXN7L2
Genome-wide association study of recurrent early-onset major depressive disorder.
SNP rs rs12049330
Pubmed ID 20125088
P-Value 6 X 10-06
Trait Major depressive disorder
Gene TNNT3
Genome-wide association study identifies five new breast cancer susceptibility loci
SNP rs rs909116
Pubmed ID 20453838
P-Value 7 X 10-07
Trait Breast cancer
Gene BIN1
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs13418717
Pubmed ID 20445134
P-Value 3 X 10-06
Trait Heart failure
Gene NADSYN1
Common genetic determinants of vitamin D insufficiency: a genome-wide association study.
SNP rs rs12785878
Pubmed ID 20541252
P-Value 2 X 10-27
Trait Vitamin D insufficiency
Gene HIATL1
Identification of 15 loci influencing height in a Korean population.
SNP rs rs16910061
Pubmed ID 19893584
P-Value 3 X 10-06
Trait Height
Gene GOLIM4
Many sequence variants affecting diversity of adult human height.
SNP rs rs4345115
Pubmed ID 18391951
P-Value 7 X 10-06
Trait Height
Gene MACC1
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs38152
Pubmed ID 20041166
P-Value 7 X 10-08
Trait HIV-1 control
Gene KLHL13
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs2430212
Pubmed ID 19084217
P-Value 2 X 10-06
Trait Serum markers of iron status
Gene CLPTM1L
A genome-wide association study of lung cancer identifies a region of chromosome 5p15 associated with risk for adenocarcinoma.
SNP rs rs31489
Pubmed ID 19836008
P-Value 2 X 10-10
Trait Lung adenocarcinoma
Common 5p15.33 and 6p21.33 variants influence lung cancer risk.
SNP rs rs401681
Pubmed ID 18978787
P-Value 8 X 10-09
Trait Lung cancer
A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33.
SNP rs rs401681
Pubmed ID 20101243
P-Value 7 X 10-07
Trait Pancreatic cancer
Lung cancer susceptibility locus at 5p15.33.
SNP rs rs402710
Pubmed ID 18978790
P-Value 4 X 10-06
Trait Lung cancer
Variants near DMRT1, TERT and ATF7IP are associated with testicular germ cell cancer
SNP rs rs4635969
Pubmed ID 20543847
P-Value 1 X 10-23
Trait Testicular germ cell cancer
Deciphering the impact of common genetic variation on lung cancer risk: a genome-wide association study.
SNP rs rs4975616
Pubmed ID 19654303
P-Value 3 X 10-09
Trait Lung cancer
Gene PHF19
REL, encoding a member of the NF-kappaB family of transcription factors, is a newly defined risk locus for rheumatoid arthritis.
SNP rs rs881375
Pubmed ID 19503088
P-Value 4 X 10-08
Trait Rheumatoid arthritis
Gene MCTP2
Does parental expressed emotion moderate genetic effects in ADHD? An exploration using a genome wide association scan.
SNP rs rs4321143
Pubmed ID 18846501
P-Value 7 X 10-06
Trait Conduct disorder (interaction)
HLA-B*5701 genotype is a major determinant of drug-induced liver injury due to flucloxacillin.
SNP rs rs4984390
Pubmed ID 19483685
P-Value 4 X 10-06
Trait Drug-induced liver injury (flucloxacillin)
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs6496074
Pubmed ID 20125193
P-Value 3 X 10-06
Trait Cognitive test performance
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs7173947
Pubmed ID 20139978
P-Value 3 X 10-08
Trait Hematological and biochemical traits
Gene RBM19
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs11066587
Pubmed ID 19197348
P-Value 5 X 10-06
Trait Quantitative traits
Gene DNAJC15
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs1324015
Pubmed ID 19734545
P-Value 9 X 10-06
Trait Cognitive performance
Gene FOXP1
Linkage and genome-wide association analysis of obesity-related phenotypes: association of weight with the MGAT1 gene.
SNP rs rs1024889
Pubmed ID 19851299
P-Value 6 X 10-06
Trait Body mass index
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs17651978
Pubmed ID 18821565
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder
Gene TF
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs1799852
Pubmed ID 19084217
P-Value 5 X 10-06
Trait Serum markers of iron status
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs1830084
Pubmed ID 19084217
P-Value 1 X 10-09
Trait Serum markers of iron status
Variants in TF and HFE explain approximately 40% of genetic variation in serum-transferrin levels.
SNP rs rs3811647
Pubmed ID 19084217
P-Value 3 X 10-15
Trait Serum markers of iron status
Gene ZDHHC21
Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03).
SNP rs rs1556032
Pubmed ID 19754311
P-Value 9 X 10-06
Trait AIDS
Gene PTPN2
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs1893217
Pubmed ID 19430480
P-Value 4 X 10-15
Trait Type 1 diabetes
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs1893217
Pubmed ID 20190752
P-Value 3 X 10-10
Trait Celiac disease
Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.
SNP rs rs2542151
Pubmed ID 17554260
P-Value 1 X 10-14
Trait Type 1 diabetes
Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility.
SNP rs rs2542151
Pubmed ID 17554261
P-Value 3 X 10-08
Trait Crohn's disease
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs2542151
Pubmed ID 17554300
P-Value 2 X 10-07
Trait Crohn's disease
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs2542151
Pubmed ID 18587394
P-Value 5 X 10-17
Trait Crohn's disease
Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.
SNP rs rs2542151
Pubmed ID 18978792
P-Value 9 X 10-08
Trait Type 1 diabetes
Gene IL16
Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations.
SNP rs rs7172689
Pubmed ID 18821565
P-Value 4 X 10-06
Trait Inattentive symptoms
Gene IRF4
A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia.
SNP rs rs872071
Pubmed ID 18758461
P-Value 2 X 10-20
Trait Chronic lymphocytic leukemia
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs1033180
Pubmed ID 20190752
P-Value 6 X 10-08
Trait Celiac disease
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs1540771
Pubmed ID 17952075
P-Value 4 X 10-18
Trait Freckles
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs12203592
Pubmed ID 18483556
P-Value 7 X 10-127
Trait Black vs. blond hair color
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs12203592
Pubmed ID 18483556
P-Value 9 X 10-28
Trait Black vs. red hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12203592
Pubmed ID 20585627
P-Value 2 X 10-28
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12203592
Pubmed ID 20585627
P-Value 4 X 10-07
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12203592
Pubmed ID 20585627
P-Value 2 X 10-15
Trait Eye color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12203592
Pubmed ID 20585627
P-Value 2 X 10-91
Trait Freckling
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs12210050
Pubmed ID 19340012
P-Value 5 X 10-14
Trait Tanning
Gene EIF6
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs619865
Pubmed ID 20585627
P-Value 5 X 10-14
Trait Freckling
Gene CPNE8
HLA-B*5701 genotype is a major determinant of drug-induced liver injury due to flucloxacillin.
SNP rs rs6582630
Pubmed ID 19483685
P-Value 1 X 10-06
Trait Drug-induced liver injury (flucloxacillin)
Gene USP3
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs10519210
Pubmed ID 20445134
P-Value 1 X 10-08
Trait Heart failure
Gene QKI
Genome-Wide Association Study of Major Recurrent Depression in the U.K. Population
SNP rs rs4709845
Pubmed ID 20516156
P-Value 9 X 10-06
Trait Major depressive disorder
Genome-wide association scan identifies candidate polymorphisms associated with differential response to anti-TNF treatment in rheumatoid arthritis.
SNP rs rs10945919
Pubmed ID 18615156
P-Value 3 X 10-07
Trait Response to TNF antagonist treatment
Gene PRICKLE2
Genome-wide association study of vitamin B6, vitamin B12, folate, and homocysteine blood concentrations.
SNP rs rs153734
Pubmed ID 19303062
P-Value 7 X 10-06
Trait Folate pathway vitamin levels
Gene ANO2
Genome-wide association study of panic disorder in the Japanese population.
SNP rs rs12579350
Pubmed ID 19165232
P-Value 4 X 10-09
Trait Panic disorder
Gene PEX14
Genome-wide association identifies ATOH7 as a major gene determining human optic disc size
SNP rs rs12741973
Pubmed ID 20395239
P-Value 7 X 10-06
Trait Optic disc size (rim)
Gene C12orf4
Common genetic variants associate with serum phosphorus concentration
SNP rs rs2970818
Pubmed ID 20558539
P-Value 4000000000
Trait Serum phosphorus concentrations
Gene ATP2B1
Genome-wide association study of blood pressure and hypertension.
SNP rs rs2681472
Pubmed ID 19430479
P-Value 2 X 10-11
Trait Hypertension
Genome-wide association study of blood pressure and hypertension.
SNP rs rs2681472
Pubmed ID 19430479
P-Value 1 X 10-09
Trait Diastolic blood pressure
Genome-wide association study of blood pressure and hypertension.
SNP rs rs2681492
Pubmed ID 19430479
P-Value 4 X 10-11
Trait Systolic blood pressure
A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.
SNP rs rs17249754
Pubmed ID 19396169
P-Value 1 X 10-07
Trait Biomedical quantitative traits
A large-scale genome-wide association study of Asian populations uncovers genetic factors influencing eight quantitative traits.
SNP rs rs17249754
Pubmed ID 19396169
P-Value 3 X 10-06
Trait Biomedical quantitative traits
Gene FAH
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs11634397
Pubmed ID 20581827
P-Value 2 X 10-09
Trait Type 2 diabetes
Gene RPAP3
Genome-wide association study implicates a chromosome 12 risk locus for late-onset Alzheimer disease.
SNP rs rs11610206
Pubmed ID 19118814
P-Value 3 X 10-07
Trait Alzheimer's disease
Gene PRRX2
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs7866070
Pubmed ID 20585627
P-Value 7 X 10-07
Trait Common traits (Other)
Gene TLE4
Loci at chromosomes 13, 19 and 20 influence age at natural menopause.
SNP rs rs2151145
Pubmed ID 19448619
P-Value 1 X 10-07
Trait Menopause (age at onset)
Genome-wide association study implicates chromosome 9q21.31 as a susceptibility locus for asthma in mexican children.
SNP rs rs2378383
Pubmed ID 19714205
P-Value 7 X 10-07
Trait Asthma (childhood onset)
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs12554086
Pubmed ID 20031603
P-Value 4 X 10-07
Trait RR interval (heart rate)
Gene FBLN5
Many sequence variants affecting diversity of adult human height.
SNP rs rs7153027
Pubmed ID 18391951
P-Value 1 X 10-10
Trait Height
Gene RTEL1
Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.
SNP rs rs4809324
Pubmed ID 19578366
P-Value 2 X 10-09
Trait Glioma (high-grade)
Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility.
SNP rs rs6010620
Pubmed ID 19578366
P-Value 3 X 10-09
Trait Glioma (high-grade)
Genome-wide association study identifies five susceptibility loci for glioma.
SNP rs rs6010620
Pubmed ID 19578367
P-Value 3 X 10-12
Trait Glioma
Gene PPM1F
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs412050
Pubmed ID 18839057
P-Value 6 X 10-06
Trait Attention deficit hyperactivity disorder
Gene ZNF202
Genomewide association study of movement-related adverse antipsychotic effects.
SNP rs rs2126709
Pubmed ID 19875103
P-Value 4 X 10-07
Trait Response to antipsychotic therapy (extrapyramidal side effects)
Gene LITAF
Common variants at ten loci influence QT interval duration in the QTGEN Study.
SNP rs rs8049607
Pubmed ID 19305408
P-Value 5 X 10-15
Trait QT interval
Common variants at ten loci modulate the QT interval duration in the QTSCD Study.
SNP rs rs8049607
Pubmed ID 19305409
P-Value 6 X 10-15
Trait QT interval
Gene PEAR1
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs12566888
Pubmed ID 20526338
P-Value 4 X 10-16
Trait Platelet aggregation
Genome-wide meta-analyses identifies seven loci associated with platelet aggregation in responseto agonists
SNP rs rs12566888
Pubmed ID 20526338
P-Value 5 X 10-19
Trait Platelet aggregation
Gene RAP1GDS1
Genome-wide association study of biochemical traits in Korcula Island, Croatia.
SNP rs rs10516430
Pubmed ID 19260141
P-Value 6 X 10-06
Trait Biochemical measures
Gene GFOD1
Framingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes.
SNP rs rs499818
Pubmed ID 17903304
P-Value 7 X 10-06
Trait Major CVD
Gene GP2
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs12444268
Pubmed ID 19430480
P-Value 2 X 10-07
Trait Type 1 diabetes
Gene LIPC
Genetic variants near TIMP3 and high-density lipoprotein-associated loci influence susceptibility to age-related macular degeneration
SNP rs rs493258
Pubmed ID 20385819
P-Value 1 X 10-07
Trait Age-related macular degeneration
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs493258
Pubmed ID 20385826
P-Value 2 X 10-08
Trait Age-related macular degeneration
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
SNP rs rs1532085
Pubmed ID 19060910
P-Value 2 X 10-10
Trait HDL cholesterol
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs1532085
Pubmed ID 19060911
P-Value 4 X 10-07
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs1532085
Pubmed ID 19060911
P-Value 1 X 10-35
Trait HDL cholesterol
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs1800588
Pubmed ID 18193044
P-Value 2 X 10-32
Trait HDL cholesterol
Genetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis.
SNP rs rs3825776
Pubmed ID 18084291
P-Value 9 X 10-06
Trait Amyotrophic lateral sclerosis
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs4775031
Pubmed ID 20125193
P-Value 2 X 10-06
Trait Cognitive test performance
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs4775041
Pubmed ID 18193043
P-Value 3 X 10-20
Trait HDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs4775041
Pubmed ID 18193043
P-Value 2 X 10-08
Trait Triglycerides
Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum.
SNP rs rs4775041
Pubmed ID 19043545
P-Value 1 X 10-07
Trait Serum metabolites
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs10468017
Pubmed ID 19060906
P-Value 8 X 10-23
Trait HDL cholesterol
Genome-wide association study of advanced age-related macular degeneration identifies a role of the hepatic lipase gene (LIPC)
SNP rs rs10468017
Pubmed ID 20385826
P-Value 1 X 10-08
Trait Age-related macular degeneration
Gene STK31
A genome-wide association study of self-rated health
SNP rs rs6573416
Pubmed ID 20707712
P-Value 3 X 10-06
Trait Self-rated health
Gene CYP2C18
A genome-wide association study of acenocoumarol maintenance dosage.
SNP rs rs12772169
Pubmed ID 19578179
P-Value 8 X 10-12
Trait Acenocoumarol maintenance dosage
Association of cytochrome P450 2C19 genotype with the antiplatelet effect and clinical efficacy of clopidogrel therapy.
SNP rs rs12777823
Pubmed ID 19706858
P-Value 2 X 10-13
Trait Response to clopidogrel therapy
Gene MGMT
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs2387326
Pubmed ID 17903293
P-Value 1 X 10-06
Trait Select biomarker traits
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs9804317
Pubmed ID 20125193
P-Value 7 X 10-06
Trait Cognitive test performance
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs11818629
Pubmed ID 20041166
P-Value 3 X 10-06
Trait HIV-1 control
Gene CNTN6
Genome-wide association of lipid-lowering response to statins in combined study populations
SNP rs rs35964523
Pubmed ID 20339536
P-Value 8 X 10-06
Trait Response to statin therapy
Gene SAMD5
Genome-Wide Scan of Copy Number Variation in Late-Onset Alzheimer's Disease.
SNP rs rs9390537
Pubmed ID 19749422
P-Value 8 X 10-06
Trait Alzheimer's disease
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs9497975
Pubmed ID 20041166
P-Value 7 X 10-08
Trait HIV-1 control
Gene DOCK7
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs1167998
Pubmed ID 19060911
P-Value 2 X 10-12
Trait Triglycerides
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs1748195
Pubmed ID 18193043
P-Value 2 X 10-10
Trait Triglycerides
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs10889353
Pubmed ID 19060906
P-Value 3 X 10-07
Trait Triglycerides
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs10889353
Pubmed ID 19060911
P-Value 4 X 10-12
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs10889353
Pubmed ID 19060911
P-Value 8 X 10-06
Trait LDL cholesterol
Gene TMEM38B
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs1463984
Pubmed ID 20125193
P-Value 3 X 10-06
Trait Cognitive test performance
Gene SRBD1
Genome-wide Association Study of Normal Tension Glaucoma: Common Variants in SRBD1 and ELOVL5 Contribute to Disease Susceptibility
SNP rs rs3213787
Pubmed ID 20363506
P-Value 3 X 10-09
Trait Glaucoma
Gene FBN1
A genome-wide association study of breast and prostate cancer in the NHLBI's Framingham Heart Study.
SNP rs rs1876206
Pubmed ID 17903305
P-Value 6 X 10-06
Trait Breast cancer
Gene GRM7
Genome-wide association study of panic disorder in the Japanese population.
SNP rs rs3749380
Pubmed ID 19165232
P-Value 2 X 10-06
Trait Panic disorder
Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study.
SNP rs rs4591494
Pubmed ID 17903294
P-Value 9 X 10-06
Trait Factor VII
Novel loci for major depression identified by genome-wide association study of Sequenced Treatment Alternatives to Relieve Depression and meta-analysis of three studies.
SNP rs rs9870680
Pubmed ID 20038947
P-Value 1 X 10-06
Trait Major depressive disorder (broad)
Gene BBX
Genome-wide and candidate gene association study of cigarette smoking behaviors.
SNP rs rs6437740
Pubmed ID 19247474
P-Value 2 X 10-07
Trait Smoking behavior
Gene CDCA7L
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs1175000
Pubmed ID 20189936
P-Value 5 X 10-06
Trait Height
A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study.
SNP rs rs10499559
Pubmed ID 17903292
P-Value 8 X 10-06
Trait Thyroid stimulating hormone
Gene RAD50
Genome-wide scan on total serum IgE levels identifies FCER1A as novel susceptibility locus.
SNP rs rs2040704
Pubmed ID 18846228
P-Value 4 X 10-08
Trait Serum IgE levels
Genome-wide association study of asthma identifies RAD50-IL13 and HLA-DR/DQ regions.
SNP rs rs2244012
Pubmed ID 20159242
P-Value 3 X 10-07
Trait Asthma
Gene BDH2P1
Voxelwise genome-wide association study (vGWAS).
SNP rs rs2132683
Pubmed ID 20171287
P-Value 1 X 10-06
Trait Brain structure
Gene FAM19A5
Genome-wide association study of response to methylphenidate in 187 children with attention-deficit/hyperactivity disorder.
SNP rs rs9627183
Pubmed ID 18821564
P-Value 3 X 10-06
Trait Attention deficit hyperactivity disorder
Gene GLG1
A pilot genome-wide association study of early-onset breast cancer.
SNP rs rs10871290
Pubmed ID 18463975
P-Value 4 X 10-07
Trait Breast cancer
Gene PROCR
Novel associations of multiple genetic loci with plasma levels of factor VII, factor VIII, and von Willebrand factor: The CHARGE (Cohorts for Heart and Aging Research in Genome Epidemiology) Consortium.
SNP rs rs867186
Pubmed ID 20231535
P-Value 6 X 10-37
Trait Plasma coagulation factors
Gene SH3BGRL2
Common genetic variation and susceptibility to partial epilepsies: a genome-wide association study
SNP rs rs346291
Pubmed ID 20522523
P-Value 3 X 10-07
Trait Partial epilepsies
Gene ACADM
A genome-wide perspective of genetic variation in human metabolism.
SNP rs rs211718
Pubmed ID 20037589
P-Value 1 X 10-63
Trait Serum metabolites
Gene RBPJ
Genome-wide association study meta-analysis identifies seven new rheumatoid arthritis risk lock
SNP rs rs874040
Pubmed ID 20453842
P-Value 1 X 10-16
Trait Rheumatoid arthritis
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs10517086
Pubmed ID 19430480
P-Value 5 X 10-10
Trait Type 1 diabetes
Gene ICOSLG
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
SNP rs rs762421
Pubmed ID 18587394
P-Value 1 X 10-09
Trait Crohn's disease
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs4819388
Pubmed ID 20190752
P-Value 2 X 10-09
Trait Celiac disease
Gene PCNX
Genome-wide association study of alcohol dependence.
SNP rs rs36563
Pubmed ID 19581569
P-Value 5 X 10-06
Trait Alcohol dependence
Gene NDFIP1
A genome-wide association study of testicular germ cell tumor.
SNP rs rs4624820
Pubmed ID 19483681
P-Value 3 X 10-13
Trait Testicular germ cell tumor
Variants near DMRT1, TERT and ATF7IP are associated with testicular germ cell cancer
SNP rs rs4624820
Pubmed ID 20543847
P-Value 1 X 10-14
Trait Testicular germ cell cancer
Gene TRAPPC6A
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs2159324
Pubmed ID 19197348
P-Value 4 X 10-07
Trait Quantitative traits
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs2159324
Pubmed ID 19197348
P-Value 2 X 10-06
Trait Quantitative traits
Gene TBC1D4
The Association of Genome-Wide Variation with the Risk of Incident Heart Failure in Adults of European and African Ancestry: A Prospective Meta-Analysis from the CHARGE Consortium
SNP rs rs548097
Pubmed ID 20445134
P-Value 6 X 10-07
Trait Heart failure
Gene C6orf223
New loci associated with kidney function and chronic kidney disease
SNP rs rs881858
Pubmed ID 20383146
P-Value 9 X 10-14
Trait Chronic kidney disease
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
SNP rs rs9472138
Pubmed ID 18372903
P-Value 4 X 10-06
Trait Type 2 diabetes
Gene CUBN
Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae.
SNP rs rs10508517
Pubmed ID 19197348
P-Value 6 X 10-06
Trait Quantitative traits
Genome-wide association study of vitamin B6, vitamin B12, folate, and homocysteine blood concentrations.
SNP rs rs11254363
Pubmed ID 19303062
P-Value 1 X 10-06
Trait Folate pathway vitamin levels
Gene SLC22A3
Multiple newly identified loci associated with prostate cancer susceptibility.
SNP rs rs9364554
Pubmed ID 18264097
P-Value 6 X 10-10
Trait Prostate cancer
Gene TTC39B
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs471364
Pubmed ID 19060906
P-Value 3 X 10-10
Trait HDL cholesterol
Gene CTSF
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs2242663
Pubmed ID 19416921
P-Value 1 X 10-06
Trait Bipolar disorder
Gene CXXC1
Common variants at 2q37.3, 8q24.21, 15q21.3 and 16q24.1 influence chronic lymphocytic leukemia risk.
SNP rs rs1036935
Pubmed ID 20062064
P-Value 2 X 10-06
Trait Chronic lymphocytic leukemia
Gene LDLR
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs2228671
Pubmed ID 19060911
P-Value 9 X 10-24
Trait Cholesterol, total
Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts.
SNP rs rs2228671
Pubmed ID 19060911
P-Value 4 X 10-14
Trait LDL cholesterol
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs6511720
Pubmed ID 18193043
P-Value 4 X 10-26
Trait LDL cholesterol
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs6511720
Pubmed ID 18193044
P-Value 2 X 10-51
Trait LDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs6511720
Pubmed ID 19060906
P-Value 2 X 10-26
Trait LDL cholesterol
Genome-wide association analysis of metabolic traits in a birth cohort from a founder population.
SNP rs rs11668477
Pubmed ID 19060910
P-Value 2 X 10-07
Trait LDL cholesterol
Gene MDM4
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs12143943
Pubmed ID 19734545
P-Value 5 X 10-06
Trait Cognitive performance
Gene CAMK1D
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
SNP rs rs12779790
Pubmed ID 18372903
P-Value 1 X 10-10
Trait Type 2 diabetes
Gene GCDH
Multiple loci influence erythrocyte phenotypes in the CHARGE Consortium.
SNP rs rs11085824
Pubmed ID 19862010
P-Value 1 X 10-11
Trait Mean corpuscular hemoglobin
Gene CPSF2
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs12896399
Pubmed ID 17952075
P-Value 1 X 10-48
Trait Blond vs. brown hair color
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs12896399
Pubmed ID 17952075
P-Value 4 X 10-38
Trait Blue vs. green eyes
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs12896399
Pubmed ID 18483556
P-Value 8 X 10-21
Trait Black vs. blond hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 5 X 10-13
Trait Hair color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 1 X 10-16
Trait Eye color
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs12896399
Pubmed ID 20585627
P-Value 2 X 10-23
Trait Eye color
Gene PARK7
Multiple common variants for celiac disease influencing immune gene expression.
SNP rs rs12727642
Pubmed ID 20190752
P-Value 9 X 10-08
Trait Celiac disease
Gene SLC25A37
Identification of seven new prostate cancer susceptibility loci through a genome-wide association study.
SNP rs rs1512268
Pubmed ID 19767753
P-Value 3 X 10-30
Trait Prostate cancer
Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population
SNP rs rs1512268
Pubmed ID 20676098
P-Value 4 X 10-11
Trait Prostate cancer
Gene TRPS1
A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3.
SNP rs rs16892766
Pubmed ID 18372905
P-Value 3 X 10-18
Trait Colorectal cancer
Genome-wide association scan of the time to onset of attention deficit hyperactivity disorder.
SNP rs rs17658378
Pubmed ID 18937294
P-Value 9 X 10-06
Trait Attention deficit hyperactivity disorder (time to onset)
Gene RPL10AP3
Genome-wide association and meta-analysis of bipolar disorder in individuals of European ancestry.
SNP rs rs6990255
Pubmed ID 19416921
P-Value 6 X 10-06
Trait Bipolar disorder
Gene PIAS1
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs448720
Pubmed ID 20125193
P-Value 5 X 10-06
Trait Cognitive test performance
Gene ASAP2
Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
SNP rs rs1109670
Pubmed ID 19010793
P-Value 9 X 10-06
Trait Multiple sclerosis
Gene ACSM1
Genomewide association for schizophrenia in the CATIE study: results of stage 1.
SNP rs rs151222
Pubmed ID 18347602
P-Value 6 X 10-06
Trait Schizophrenia
Gene variants associated with schizophrenia in a Norwegian genome-wide study are replicated in a large European cohort.
SNP rs rs433598
Pubmed ID 20185149
P-Value 3 X 10-06
Trait Schizophrenia
Gene DBNDD1
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs11648785
Pubmed ID 19340012
P-Value 3 X 10-09
Trait Tanning
Gene QPCT
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.
SNP rs rs4352210
Pubmed ID 20031603
P-Value 2 X 10-06
Trait RR interval (heart rate)
Gene CFHR1
Germline genomic variants associated with childhood acute lymphoblastic leukemia.
SNP rs rs6428370
Pubmed ID 19684603
P-Value 7 X 10-06
Trait Acute lymphoblastic leukemia (childhood)
Gene SLC22A18
Genome-wide association meta-analysis for total serum bilirubin levels.
SNP rs rs16928809
Pubmed ID 19414484
P-Value 1 X 10-07
Trait Serum bilirubin levels
Gene KIAA1274
Common body mass index-associated variants confer risk of extreme obesity.
SNP rs rs10999409
Pubmed ID 19553259
P-Value 5 X 10-06
Trait Obesity (extreme)
Gene KCNS3
Genetic variation in DPP6 is associated with susceptibility to amyotrophic lateral sclerosis.
SNP rs rs7580332
Pubmed ID 18084291
P-Value 9 X 10-06
Trait Amyotrophic lateral sclerosis
Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data.
SNP rs rs16984239
Pubmed ID 17362836
P-Value 2 X 10-06
Trait Amyotrophic lateral sclerosis
Gene MAN2A1
Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study.
SNP rs rs4460176
Pubmed ID 17903294
P-Value 3 X 10-06
Trait Hemostatic factors and hematological phenotypes
Gene TRA2B
Genome-wide and candidate gene association study of cigarette smoking behaviors.
SNP rs rs6444087
Pubmed ID 19247474
P-Value 9 X 10-06
Trait Smoking behavior
Does parental expressed emotion moderate genetic effects in ADHD? An exploration using a genome wide association scan.
SNP rs rs10049246
Pubmed ID 18846501
P-Value 8 X 10-06
Trait Attention deficit hyperactivity disorder symptoms (interaction)
Gene EXOC2
Genetic determinants of hair, eye and skin pigmentation in Europeans.
SNP rs rs1540771
Pubmed ID 17952075
P-Value 4 X 10-18
Trait Freckles
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs6918152
Pubmed ID 18483556
P-Value 6 X 10-08
Trait Black vs. blond hair color
A genome-wide association study identifies novel alleles associated with hair color and skin pigmentation.
SNP rs rs6918152
Pubmed ID 18483556
P-Value 5 X 10-07
Trait Black vs. red hair color
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs12210050
Pubmed ID 19340012
P-Value 5 X 10-14
Trait Tanning
Gene CDC25B
Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.
SNP rs rs3761218
Pubmed ID 17554300
P-Value 7 X 10-06
Trait Bipolar disorder
Gene SP140
A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia.
SNP rs rs13397985
Pubmed ID 18758461
P-Value 6 X 10-10
Trait Chronic lymphocytic leukemia
Gene DLD
Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region.
SNP rs rs886774
Pubmed ID 19915572
P-Value 3 X 10-08
Trait Ulcerative colitis
A genome-wide association study identifies three new susceptibility loci for ulcerative colitis in the Japanese population.
SNP rs rs2108225
Pubmed ID 19915573
P-Value 1 X 10-07
Trait Ulcerative colitis
Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.
SNP rs rs4598195
Pubmed ID 19122664
P-Value 1 X 10-06
Trait Ulcerative colitis
Genome-wide association identifies multiple ulcerative colitis susceptibility loci
SNP rs rs4598195
Pubmed ID 20228799
P-Value 8 X 10-08
Trait Ulcerative colitis
Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.
SNP rs rs4730273
Pubmed ID 19122664
P-Value 5 X 10-06
Trait Ulcerative colitis
Ulcerative colitis-risk loci on chromosomes 1p36 and 12q15 found by genome-wide association study.
SNP rs rs4730276
Pubmed ID 19122664
P-Value 9 X 10-06
Trait Ulcerative colitis
Gene SMARCE1
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs7221109
Pubmed ID 19430480
P-Value 1 X 10-09
Trait Type 1 diabetes
Gene TGFBRAP1
Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03).
SNP rs rs1020064
Pubmed ID 19754311
P-Value 7 X 10-06
Trait AIDS
Gene AGA
Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study.
SNP rs rs1395479
Pubmed ID 17903306
P-Value 7 X 10-06
Trait Heart rate variability traits
Gene FRS2
Many sequence variants affecting diversity of adult human height.
SNP rs rs11177669
Pubmed ID 18391951
P-Value 3 X 10-06
Trait Height
Gene PCSK9
Newly identified loci that influence lipid concentrations and risk of coronary artery disease.
SNP rs rs11206510
Pubmed ID 18193043
P-Value 4 X 10-11
Trait LDL cholesterol
Common variants at 30 loci contribute to polygenic dyslipidemia.
SNP rs rs11206510
Pubmed ID 19060906
P-Value 4 X 10-08
Trait LDL cholesterol
Genome-wide association of early-onset myocardial infarction with single nucleotide polymorphisms and copy number variants.
SNP rs rs11206510
Pubmed ID 19198609
P-Value 1 X 10-08
Trait Myocardial infarction (early onset)
Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans.
SNP rs rs11591147
Pubmed ID 18193044
P-Value 2 X 10-44
Trait LDL cholesterol
Gene ACADS
A genome-wide perspective of genetic variation in human metabolism.
SNP rs rs2014355
Pubmed ID 20037589
P-Value 5 X 10-96
Trait Serum metabolites
Gene LIF
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs5753037
Pubmed ID 19430480
P-Value 3 X 10-16
Trait Type 1 diabetes
Gene PRDM15
Genome-wide association study of tanning phenotype in a population of European ancestry.
SNP rs rs7279297
Pubmed ID 19340012
P-Value 3 X 10-06
Trait Tanning
Gene GDAP1
Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project.
SNP rs rs4471028
Pubmed ID 17903300
P-Value 2 X 10-07
Trait Waist circumference
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs6472866
Pubmed ID 18464913
P-Value 8 X 10-07
Trait Protein quantitative trait loci
Gene EML6
Common body mass index-associated variants confer risk of extreme obesity.
SNP rs rs6726292
Pubmed ID 19553259
P-Value 1 X 10-06
Trait Obesity (extreme)
Gene MKI67
Genome-wide association with select biomarker traits in the Framingham Heart Study.
SNP rs rs2387326
Pubmed ID 17903293
P-Value 1 X 10-06
Trait Select biomarker traits
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs9804317
Pubmed ID 20125193
P-Value 7 X 10-06
Trait Cognitive test performance
Common genetic variation and the control of HIV-1 in humans.
SNP rs rs11818629
Pubmed ID 20041166
P-Value 3 X 10-06
Trait HIV-1 control
Gene CAMSAP1L1
Genome-wide association study of electrocardiographic conduction measures in an isolated founder population: Kosrae.
SNP rs rs7512898
Pubmed ID 19389651
P-Value 5 X 10-06
Trait Electrocardiographic conduction measures
Gene TNS1
Genome-wide association study identifies five loci associated with lung function.
SNP rs rs2571445
Pubmed ID 20010834
P-Value 1 X 10-12
Trait Pulmonary function
Gene TCHHL1
Common variants in the trichohyalin gene are associated with straight hair in Europeans.
SNP rs rs3124314
Pubmed ID 19896111
P-Value 4 X 10-06
Trait Hair morphology
Web-based, participant-driven studies yield novel genetic associations for common traits
SNP rs rs17646946
Pubmed ID 20585627
P-Value 2 X 10-42
Trait Common traits (Other)
Gene GNAI3
Genome-wide association study of recurrent early-onset major depressive disorder.
SNP rs rs6537837
Pubmed ID 20125088
P-Value 1 X 10-06
Trait Major depressive disorder
Gene DENND4A
Genome-wide association study of hematological and biochemical traits in a Japanese population
SNP rs rs6494537
Pubmed ID 20139978
P-Value 3 X 10-09
Trait Hematological and biochemical traits
Gene PLCXD2
Common genetic variation and performance on standardized cognitive tests.
SNP rs rs4450776
Pubmed ID 20125193
P-Value 5 X 10-06
Trait Cognitive test performance
Gene GPC6
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs7995215
Pubmed ID 18839057
P-Value 1 X 10-08
Trait Attention deficit hyperactivity disorder
A genome-wide association study of neuroticism in a population-based sample
SNP rs rs9561329
Pubmed ID 20634892
P-Value 1 X 10-07
Trait Neuroticism
Gene OVCH2
NRXN3 is a novel locus for waist circumference: a genome-wide association study from the CHARGE Consortium.
SNP rs rs7932813
Pubmed ID 19557197
P-Value 5 X 10-06
Trait Waist circumference
Gene OSBPL1A
An Integration of Genome-Wide Association Study andGene Expression Profiling to Prioritize the Discovery ofNovel Susceptibility Loci for Osteoporosis-Related Traits
SNP rs rs7227401
Pubmed ID 20548944
P-Value 4 X 10-07
Trait Osteoporosis
A genome-wide association study identifies protein quantitative trait loci (pQTLs).
SNP rs rs9635963
Pubmed ID 18464913
P-Value 2 X 10-07
Trait Protein quantitative trait loci
Gene HHEX
A genome-wide association study identifies novel risk loci for type 2 diabetes.
SNP rs rs1111875
Pubmed ID 17293876
P-Value 3 X 10-06
Trait Type 2 diabetes
Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.
SNP rs rs1111875
Pubmed ID 17463246
P-Value 6 X 10-10
Trait Type 2 diabetes
A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants.
SNP rs rs1111875
Pubmed ID 17463248
P-Value 6 X 10-10
Trait Type 2 diabetes
Confirmation of multiple risk Loci and genetic impacts by a genome-wide association study of type 2 diabetes in the Japanese population.
SNP rs rs1111875
Pubmed ID 19401414
P-Value 7 X 10-12
Trait Type 2 diabetes
Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes.
SNP rs rs5015480
Pubmed ID 17463249
P-Value 5 X 10-06
Trait Type 2 diabetes
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
SNP rs rs5015480
Pubmed ID 18372903
P-Value 7 X 10-08
Trait Type 2 diabetes
Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis
SNP rs rs5015480
Pubmed ID 20581827
P-Value 1 X 10-15
Trait Type 2 diabetes
Gene HIST1H1D
Identification of ten loci associated with height highlights new biological pathways in human growth.
SNP rs rs10946808
Pubmed ID 18391950
P-Value 4 X 10-17
Trait Height
Many sequence variants affecting diversity of adult human height.
SNP rs rs10946808
Pubmed ID 18391951
P-Value 6 X 10-10
Trait Height
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs10946808
Pubmed ID 19343178
P-Value 6 X 10-12
Trait Height
Gene CEP250
A genome-wide association study in 19 633 Japanese subjects identified LHX3-QSOX2 and IGF1 as adult height loci.
SNP rs rs2236164
Pubmed ID 20189936
P-Value 2 X 10-06
Trait Height
Gene NUPR1
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs4788084
Pubmed ID 19430480
P-Value 3 X 10-13
Trait Type 1 diabetes
Gene TMED10
Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.
SNP rs rs910316
Pubmed ID 19343178
P-Value 1 X 10-07
Trait Height
Gene PTER
Genome-wide association study for early-onset and morbid adult obesity identifies three new risk loci in European populations.
SNP rs rs10508503
Pubmed ID 19151714
P-Value 2 X 10-07
Trait Obesity
Gene ASCL1
Loci related to metabolic-syndrome pathways including LEPR,HNF1A, IL6R, and GCKR associate with plasma C-reactive protein: the Women's Genome Health Study.
SNP rs rs10778213
Pubmed ID 18439548
P-Value 1 X 10-10
Trait C-reactive protein
Gene CYP3A5
A genome-wide association study of self-rated health
SNP rs rs6573416
Pubmed ID 20707712
P-Value 3 X 10-06
Trait Self-rated health
Gene PPP2R5C
A genomewide scan for common alleles affecting risk for autism
SNP rs rs7142002
Pubmed ID 20663923
P-Value 3 X 10-06
Trait Autism
Gene DNAH2
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs16956936
Pubmed ID 19430480
P-Value 5 X 10-07
Trait Type 1 diabetes
Gene DSEL
A genome-wide study of common SNPs and CNVs in cognitive performance in the CANTAB.
SNP rs rs2124349
Pubmed ID 19734545
P-Value 4 X 10-06
Trait Cognitive performance
Genome-wide association study of recurrent early-onset major depressive disorder.
SNP rs rs17077540
Pubmed ID 20125088
P-Value 2 X 10-07
Trait Major depressive disorder
Gene KCNJ11
Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes.
SNP rs rs5215
Pubmed ID 17463249
P-Value 5 X 10-11
Trait Type 2 diabetes
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes.
SNP rs rs5215
Pubmed ID 18372903
P-Value 4 X 10-07
Trait Type 2 diabetes
Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.
SNP rs rs5219
Pubmed ID 17463246
P-Value 1 X 10-07
Trait Type 2 diabetes
A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants.
SNP rs rs5219
Pubmed ID 17463248
P-Value 7 X 10-11
Trait Type 2 diabetes
Adiposity-related heterogeneity in patterns of type 2 diabetes susceptibility observed in genome-wide association data.
SNP rs rs5219
Pubmed ID 19056611
P-Value 5 X 10-07
Trait Type 2 diabetes
Adiposity-related heterogeneity in patterns of type 2 diabetes susceptibility observed in genome-wide association data.
SNP rs rs5219
Pubmed ID 19056611
P-Value 1 X 10-09
Trait Type 2 diabetes
Gene SCO1
Genome-wide and fine-resolution association analysis of malaria in West Africa.
SNP rs rs6503319
Pubmed ID 19465909
P-Value 7 X 10-07
Trait Malaria
Gene UNC5B
Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.
SNP rs rs16928529
Pubmed ID 18839057
P-Value 4 X 10-06
Trait Attention deficit hyperactivity disorder
Gene WDR66
A genome-wide association study identifies three loci associated with mean platelet volume.
SNP rs rs7961894
Pubmed ID 19110211
P-Value 7 X 10-48
Trait Mean platelet volume
A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium.
SNP rs rs7961894
Pubmed ID 19820697
P-Value 3 X 10-44
Trait Mean platelet volume
Gene CHI3L1
Effect of variation in CHI3L1 on serum YKL-40 level, risk of asthma, and lung function.
SNP rs rs4950928
Pubmed ID 18403759
P-Value 1 X 10-13
Trait YKL-40 levels
Gene CCDC88B
Genome-wide association study in alopecia areata implicates both innate and adaptive immunity
SNP rs rs694739
Pubmed ID 20596022
P-Value 4 X 10-07
Trait Alopecia areata
Gene IL27
Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.
SNP rs rs4788084
Pubmed ID 19430480
P-Value 3 X 10-13
Trait Type 1 diabetes
Gene FRMD4A
A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project.