My NCBI Sign In
Jump to: Authorized Access | Attribution | Authorized Requests

Study Description

In this study, we sequenced the exomes of 35 rhabdoid tumors, highly aggressive cancers of early childhood. This study is part of a larger effort to characterize pediatric cancers as part of the Slim Initiative for Genomic Medicine (SIGMA) project.

  • Study Type: Case Set
  • Number of study subjects that have individual level data available through Authorized Access: 35

Authorized Access
Publicly Available Data (Public ftp)

Connect to the public download site. The site contains release notes and manifests. If available, the site also contains data dictionaries, variable summaries, documents, and truncated analyses.

Molecular Data
TypeSourcePlatformNumber of Oligos/SNPsSNP Batch IdComment
Whole Exome Sequencing Agilent Agilent selected, 76bp paired end reads N/A N/A
Whole Genome Genotyping Affymetrix AFFY_6.0 934940 52074 MAF - Aggregrate genotype data
Selected publications
Diseases/Traits Related to Study (MESH terms)
Authorized Data Access Requests
Study Attribution
  • Principal Investigator
    • Charles Roberts, MD, PhD. Dana Farber Cancer Institute, Boston MA, USA
    • Todd Golub, MD. Broad Institute, Cambridge MA, USA
  • Funding Source
    • Slim Initiative for Genomic Medicine. Carlos Slim Health Institute, Mexico City, Mexico