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e-PCR forward search results

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Query sequence : AC004765 , 150812 bases long

Homo sapiens 12 BAC RPCI11-388A16 (Roswell Park Cancer Institute Human BAC Library) complete sequence

Site (bases) Marker Chr. Organism Size   L m/g R m/g
3,277..3,381 - - - 105 1/0 1/0
4,002..4,105 - - - 104 1/0 0/0
9,525..9,648 D12S341 12 Homo sapiens 124 0/0 0/0
9,694..9,796 - - - 103 1/0 1/0
15,027..15,130 - - - 104 1/0 0/0
15,107..15,209 - - - 103 1/0 1/0
23,289..23,411 RH78846 12 Homo sapiens 123 0/0 0/0
27,917..28,019 - - - 103 1/0 0/0
30,555..30,759 - - Pan troglodytes 205 0/0 0/0
30,555..30,759 G41015 - Homo sapiens 205 0/0 0/0
30,577..30,760 - - Pan troglodytes 184 0/0 1/0
30,577..30,760 G42615 - Homo sapiens 184 0/0 1/0
33,810..33,914 - - - 105 1/0 1/0
35,954..36,056 - - - 103 1/0 1/0
42,486..42,613 - - - 128 0/0 1/0
42,486..42,613 - - - 128 0/0 1/0
42,500..42,617 - - - 118 0/0 1/0
70,758..70,958 - - Pan troglodytes 201 1/0 1/0
70,758..70,958 D12S94 12 Homo sapiens 201 1/0 1/0
77,195..77,297 - - - 103 1/0 1/0
91,644..91,758 - - - 115 1/0 1/0
96,793..96,892 - - Pan troglodytes 100 0/0 0/0
96,793..96,892 SHGC-36515 12 Homo sapiens 100 0/0 0/0
107,443..107,619 - - Macaca mulatta 177 0/0 0/0
107,443..107,619 - - Pan troglodytes 177 0/0 0/0
107,443..107,619 D12S91 12 Homo sapiens 177 0/0 0/0
107,472..107,624 - - Macaca mulatta 153 0/0 0/0
107,472..107,624 - - Pan troglodytes 153 0/0 0/0
113,043..113,208 - - Macaca mulatta 166 1/0 0/0
113,043..113,208 - - Pan troglodytes 166 1/0 0/0
113,043..113,208 RH68501 12 Homo sapiens 166 1/0 0/0
114,425..114,527 - - - 103 1/0 0/0
114,504..114,606 - - - 103 1/0 1/0
125,315..125,417 - - - 103 1/0 1/0
125,447..125,550 - - - 104 1/0 1/0
130,565..130,702 - - Macaca mulatta 138 0/0 0/0
130,565..130,702 - - Pan troglodytes 138 0/0 0/0
130,565..130,702 SGC34797 12 Homo sapiens 138 0/0 0/0
130,565..130,702 - - Equus caballus 138 0/0 0/0
130,589..130,755 A009W04 12 Homo sapiens 167 0/0 0/0
130,589..130,755 - - Macaca mulatta 167 0/0 0/0
130,589..130,755 - - Pan troglodytes 167 0/0 0/0
130,589..130,755 - - Equus caballus 167 0/0 0/0
130,589..130,755 - - Macaca mulatta 167 0/0 0/0
130,589..130,755 - - Pan troglodytes 167 0/0 0/0
130,589..130,755 G32902 - Homo sapiens 167 0/0 0/0
130,589..130,755 - - Equus caballus 167 0/0 0/0
130,574..130,864 - - Pan troglodytes 291 0/0 0/0
130,574..130,864 SHGC-70148 12 Homo sapiens 291 0/0 0/0
132,343..132,594 - - Pan troglodytes 252 0/0 0/0
132,343..132,594 D12S1397 12 Homo sapiens 252 0/0 0/0
138,965..139,066 - - Pan troglodytes 102 0/0 0/0
138,965..139,066 SGC33532 12 Homo sapiens 102 0/0 0/0
140,659..140,781 - - Macaca mulatta 123 0/0 0/0
140,659..140,781 - - Pan troglodytes 123 0/0 0/0
140,659..140,781 G41016 - Homo sapiens 123 0/0 0/0
141,210..141,314 - - - 105 1/0 1/0
141,601..141,703 - - - 103 1/0 1/0
143,310..143,440 - - Pan troglodytes 131 0/0 0/0
143,310..143,440 D12S2148 - Homo sapiens 131 0/0 0/0
150,499..150,614 - - Macaca mulatta 116 0/0 0/0

(>) or (<) in "Size" column mean that product size of hit is greater or smaller then expected for this STS correspondently

Legend
L m/g Left primer mismatches/gaps
R m/g Right primer mismatches/gaps
Times
Started Wed Dec 9 04:45:25 2009
Finished Wed Dec 9 04:45:42 2009
Elapsed 17
Call parameters
(M) margin: 50
(N) mism: 1
(G) gaps: 1
(W) wordsize: 7
(F) wordtype: 1 Contiguous
STS set non_warn


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