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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CDC27-PDR90-011204
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:185


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss16342416 CDC27-009725 C/T 166 rs11570463 0 17 47181501 NT_010783.16 20245521
ss16342415 CDC27-009633 G/T 180 rs11570462 0 17 47181593 NT_010783.16 20245613
ss16342414 CDC27-009570 A/C 180 rs11570461 0 17 47181656 NT_010783.16 20245676
ss16342413 CDC27-009256 A/G 178 rs11570460 0 17 47181970 NT_010783.16 20245990
ss16342412 CDC27-009181 A/T 178 rs11570459 0 17 47182045 NT_010783.16 20246065
ss16342411 CDC27-009012 A/G 174 rs11570458 0 17 47182214 NT_010783.16 20246234
ss16342410 CDC27-008948 -/AT 176 rs11570457 0 17 47182281 NT_010783.16 20246301
ss16342409 CDC27-008899 A/C 170 rs11570456 0 17 47182327 NT_010783.16 20246347
ss16342408 CDC27-003142 A/C 174 rs221598 1 17 47188084 NT_010783.16 20252104
ss16342407 CDC27-003106 A/G 176 rs11570455 0 17 47188120 NT_010783.16 20252140
ss16342406 CDC27-002899 C/G 180 rs11570454 0 17 47188327 NT_010783.16 20252347
ss16342405 CDC27-002466 -/GTGATCTTCGTGACGGT 170 rs11570453 0 17 47188744 NT_010783.16 20252764
ss16342404 CDC27-002451 -/TTGAT 174 rs11570452 0 17 47188771 NT_010783.16 20252791
ss16342403 CDC27-002429 A/G 170 rs11570451 0 17 47188797 NT_010783.16 20252817
ss16342402 CDC27-002267 -/C 156 rs397843912 0 17 47188959 NT_010783.16 20252979
ss16342401 CDC27-002160 C/G 158 rs11079761 0 17 47189066 NT_010783.16 20253086
ss16342400 CDC27-002158 C/T 158 rs11570449 0 17 47189068 NT_010783.16 20253088
ss16342399 CDC27-002013 C/G 156 rs2285591 0 17 47189213 NT_010783.16 20253233
ss16342398 CDC27-002007 A/G 156 rs11570448 0 17 47189219 NT_010783.16 20253239
ss16342397 CDC27-001849 A/C 154 rs11570447 0 17 47189377 NT_010783.16 20253397
ss16342396 CDC27-001380 G/T 180 rs3809858 1 17 47189846 NT_010783.16 20253866
ss16342395 CDC27-001280 -/C 178 rs11570446 0 17 47189946 NT_010783.16 20253966
ss16342394 CDC27-001278 C/T 180 rs11570445 0 17 47189948 NT_010783.16 20253968
ss16342393 CDC27-001186 C/T 180 rs11570444 0 17 47190040 NT_010783.16 20254060
ss16342392 CDC27-001099 A/G 178 rs858674 0 17 47190127 NT_010783.16 20254147
ss16342391 CDC27-001055 A/G 178 rs11570443 0 17 47190171 NT_010783.16 20254191
ss16342390 CDC27-001033 A/G 178 rs11570442 0 17 47190193 NT_010783.16 20254213
ss16342389 CDC27-000963 A/G 178 rs1515754 0 17 47190263 NT_010783.16 20254283
ss16342388 CDC27-000607 C/G 176 rs11570441 0 17 47190619 NT_010783.16 20254639
ss16342387 CDC27-000478 A/C 180 rs11570440 0 17 47190748 NT_010783.16 20254768
30 of 185 subsnp's starting at ss16342416. ss# starting at ss

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