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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CTNND1-PDR90-010904
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:91


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss16341984 CTNND1-000115 C/T 166 rs529838 0 11 57761556 NT_167190.2 3236482
ss16341985 CTNND1-000217 C/T 170 rs558653 0 11 57761658 NT_167190.2 3236584
ss16341986 CTNND1-000234 C/G 170 rs11570174 0 11 57761675 NT_167190.2 3236601
ss16341987 CTNND1-000251 A/G 166 rs11570175 0 11 57761692 NT_167190.2 3236618
ss16341988 CTNND1-000516 A/G 172 rs11570176 0 11 57761957 NT_167190.2 3236883
ss16341989 CTNND1-001615 G/T 166 rs7120868 0 11 57763056 NT_167190.2 3237982
ss16341990 CTNND1-016256 A/G 160 rs10896641 0 11 57777697 NT_167190.2 3252623
ss16341991 CTNND1-016608 C/G 170 rs11570177 0 11 57778049 NT_167190.2 3252975
ss16341992 CTNND1-016653 C/T 170 rs11570178 0 11 57778094 NT_167190.2 3253020
ss16341993 CTNND1-016689 A/G 172 rs11570179 0 11 57778130 NT_167190.2 3253056
ss16341994 CTNND1-017035 A/G 174 rs541245 1 11 57778476 NT_167190.2 3253402
ss16341995 CTNND1-017066 C/T 174 rs542777 1 11 57778507 NT_167190.2 3253433
ss16341996 CTNND1-017107 A/T 174 rs11570180 0 11 57778548 NT_167190.2 3253474
ss16341997 CTNND1-017143 A/G 174 rs7938087 0 11 57778584 NT_167190.2 3253510
ss16341998 CTNND1-017651 A/G 172 rs947940 1 11 57779092 NT_167190.2 3254018
ss16341999 CTNND1-026857 C/T 160 rs11570181 0 11 57788298 NT_167190.2 3263224
ss16342000 CTNND1-027367 A/G 168 rs11570182 0 11 57788808 NT_167190.2 3263734
ss16342001 CTNND1-027760 A/T 178 rs7126553 0 11 57789201 NT_167190.2 3264127
ss16342002 CTNND1-028292 C/T 172 rs11570183 0 11 57789733 NT_167190.2 3264659
ss16342003 CTNND1-028298 A/G 172 rs11570184 0 11 57789739 NT_167190.2 3264665
ss16342004 CTNND1-029936 C/G 164 rs11570185 0 11 57791377 NT_167190.2 3266303
ss16342005 CTNND1-030547 -/TTTCT 170 rs11570186 0 11 57791988 NT_167190.2 3266914
ss16342006 CTNND1-030557 C/T 170 rs11570187 0 11 57791998 NT_167190.2 3266924
ss16342007 CTNND1-030603 G/T 170 rs11570188 0 11 57792044 NT_167190.2 3266970
ss16342008 CTNND1-031002 A/G 166 rs11570189 0 11 57792443 NT_167190.2 3267369
ss16342009 CTNND1-031539 A/C 168 rs11570190 0 11 57792980 NT_167190.2 3267906
ss16342010 CTNND1-031573 A/G 168 rs474073 0 11 57793014 NT_167190.2 3267940
ss16342011 CTNND1-031862 -/AG 180 rs397753689 0 11 57793303 NT_167190.2 3268229
ss16342012 CTNND1-032193 G/T 180 rs501054 0 11 57793634 NT_167190.2 3268560
ss16342013 CTNND1-032504 A/G 178 rs11570192 0 11 57793945 NT_167190.2 3268871
30 of 91 subsnp's starting at ss16341984. ss# starting at ss

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