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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:BID-PDR90-071503
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:163


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss12583819 BID-003236 A/G 174 rs738096 0 22 17773177 NT_187355.1 2618859
ss12583818 BID-003191 A/G 174 rs738095 0 22 17773222 NT_187355.1 2618904
ss12583817 BID-003050 A/G 172 rs8190274 0 22 17773363 NT_187355.1 2619045
ss12583816 BID-002692 C/T 180 rs8190273 0 22 17773721 NT_187355.1 2619403
ss12583815 BID-002637 C/T 180 rs8190272 0 22 17773776 NT_187355.1 2619458
ss12583814 BID-002434 C/T 176 rs8190271 0 22 17773979 NT_187355.1 2619661
ss12583813 BID-002283 G/T 176 rs8190270 0 22 17774130 NT_187355.1 2619812
ss12583812 BID-002222 C/T 170 rs8190269 0 22 17774191 NT_187355.1 2619873
ss12583811 BID-002078 C/G 174 rs8190268 0 22 17774335 NT_187355.1 2620017
ss12583810 BID-002047 C/G 174 rs8190267 0 22 17774366 NT_187355.1 2620048
ss12583809 BID-002041 A/C 172 rs443912 1 22 17774372 NT_187355.1 2620054
ss12583808 BID-001893 -/GGGGCGGGCC 180 rs8190266 0 22 17774510 NT_187355.1 2620192
ss12583807 BID-001872 C/G 180 rs8190265 0 22 17774531 NT_187355.1 2620213
ss12583806 BID-001515 C/T 148 rs8190264 0 22 17774888 NT_187355.1 2620570
ss12583805 BID-001442 A/G 148 rs8190263 0 22 17774961 NT_187355.1 2620643
ss12583804 BID-001434 C/T 148 rs386333 1 22 17774969 NT_187355.1 2620651
ss12583803 BID-001391 C/G 130 rs8190262 0 22 17775011 NT_187355.1 2620693
ss12583802 BID-001340 G/T 128 rs8190261 0 22 17775061 NT_187355.1 2620743
ss12583801 BID-001281 A/G 124 rs8190260 0 22 17775120 NT_187355.1 2620802
ss12583800 BID-000936 A/G 136 rs8190259 0 22 17775465 NT_187355.1 2621147
ss12583799 BID-000831 A/C 170 rs8190258 0 22 17775570 NT_187355.1 2621252
ss12583798 BID-000830 A/G 170 rs8190257 0 22 17775571 NT_187355.1 2621253
ss12583797 BID-000823 A/C 170 rs8190256 0 22 17775578 NT_187355.1 2621260
ss12583796 BID-000788 A/G 170 rs8190255 0 22 17775613 NT_187355.1 2621295
ss12583795 BID-000785 A/G 168 rs366542 1 22 17775616 NT_187355.1 2621298
ss12583794 BID-000691 A/C 168 rs8190254 0 22 17775710 NT_187355.1 2621392
ss12583793 BID-000603 A/G 170 rs5992827 1 22 17775798 NT_187355.1 2621480
ss12583792 BID-000595 G/T 170 rs8190253 0 22 17775806 NT_187355.1 2621488
ss12583791 BID-000461 A/G 170 rs8190252 0 22 17775940 NT_187355.1 2621622
ss12583790 BID-000096 A/G 170 rs8190251 0 22 17776305 NT_187355.1 2621987
30 of 163 subsnp's starting at ss12583819. ss# starting at ss

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