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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:TFDP1-PDR90-101602
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:155


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss5605640 TFDP1-000266 C/G 126 rs4150687 0 13 113587423 NT_027140.7 1743982
ss5605641 TFDP1-000619 G/T 170 rs4150688 0 13 113587776 NT_027140.7 1744335
ss5605642 TFDP1-000748 A/G 126 rs4150689 0 13 113587905 NT_027140.7 1744464
ss5605643 TFDP1-001250 -/AA 126 rs4150690 0 13 113588407 NT_027140.7 1744966
ss5605644 TFDP1-001445 C/T 130 rs4150691 0 13 113588602 NT_027140.7 1745161
ss5605645 TFDP1-004752 C/T 174 rs4150692 0 13 113591909 NT_027140.7 1748468
ss5605646 TFDP1-004817 C/T 176 rs4150693 0 13 113591974 NT_027140.7 1748533
ss5605647 TFDP1-004835 A/G 178 rs4150694 0 13 113591992 NT_027140.7 1748551
ss5605648 TFDP1-004844 C/T 178 rs4150695 0 13 113592001 NT_027140.7 1748560
ss5605649 TFDP1-004850 A/C/T 178 rs4150696 0 13 113592007 NT_027140.7 1748566
ss5605650 TFDP1-004883 A/G 176 rs4150697 0 13 113592040 NT_027140.7 1748599
ss5605651 TFDP1-008335 C/T 138 rs2316121 1 13 113595492 NT_027140.7 1752051
ss5605652 TFDP1-008651 C/T 156 rs4150698 0 13 113595808 NT_027140.7 1752367
ss5605653 TFDP1-008691 C/T 166 rs4150699 0 13 113595848 NT_027140.7 1752407
ss5605654 TFDP1-008708 A/G 164 rs4150700 0 13 113595865 NT_027140.7 1752424
ss5605655 TFDP1-008718 G/T 164 rs4150701 0 13 113595875 NT_027140.7 1752434
ss5605656 TFDP1-011077 C/T 168 rs4150702 0 13 113598234 NT_027140.7 1754793
ss5605657 TFDP1-011105 A/G 168 rs4150703 0 13 113598262 NT_027140.7 1754821
ss5605658 TFDP1-011446 C/T 178 rs4150704 0 13 113598603 NT_027140.7 1755162
ss5605659 TFDP1-011557 C/T 178 rs4150705 0 13 113598714 NT_027140.7 1755273
ss5605660 TFDP1-011558 A/G 178 rs4150706 0 13 113598715 NT_027140.7 1755274
ss5605661 TFDP1-011903 A/G 176 rs4150707 0 13 113599060 NT_027140.7 1755619
ss5605662 TFDP1-011981 C/T 168 rs4150708 0 13 113599138 NT_027140.7 1755697
ss5605663 TFDP1-012501 A/G 166 rs4150709 0 13 113599658 NT_027140.7 1756217
ss5605664 TFDP1-012566 C/T 160 rs4150710 0 13 113599723 NT_027140.7 1756282
ss5605665 TFDP1-015811 A/G 178 rs4150711 0 13 113602968 NT_027140.7 1759527
ss5605666 TFDP1-016147 A/G 174 rs4150712 0 13 113603304 NT_027140.7 1759863
ss5605667 TFDP1-016194 A/G 178 rs4150713 0 13 113603351 NT_027140.7 1759910
ss5605668 TFDP1-016294 A/G 178 rs4150714 0 13 113603451 NT_027140.7 1760010
ss5605639 TFDP1-000164 -/AG 136 rs397843652 0 N.D. N.D.
30 of 155 subsnp's starting at ss5605640. ss# starting at ss

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