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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:PKMYT1-PDR90-100402
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:THESE SNPS WERE GENERATED AS PART OF THE NIEHS SUPPORTED GRANT (HL66682) FOR THE ENVIRONMENTAL GENOME PROJECT TO DEVELOP SNP RESOURCES DISTRIBUTED TO THE RESEARCH COMMUNITY. PLEASE SEE EGP.GS.WASHINGTON.EDU FOR DETAILS ON HOW TO CITE THIS WORK. THE FIRST DESCRIPTOR IN THE "SUBMITTER SNP ID:" FIELD INDICATES THE HUGO ASSIGNED NAME OF THE GENE STUDIED. THE SECOND NUMBER DENOTES THE VARIANT BASE POSITION IN THE LISTED GENBANK ACCESSION NUMBER.
Batch Total SubSNP(ss) Count:50


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss5604620 PKMYT1-004617 A/G 168 rs4149793 0 16 2976371 NT_010393.17 2966371
ss5604619 PKMYT1-004610 C/T 168 rs4149792 0 16 2976378 NT_010393.17 2966378
ss5604618 PKMYT1-004556 C/T 168 rs4149791 0 16 2976432 NT_010393.17 2966432
ss5604617 PKMYT1-004487 C/T 174 rs4149790 0 16 2976501 NT_010393.17 2966501
ss5604616 PKMYT1-004376 C/G 178 rs4149789 0 16 2976612 NT_010393.17 2966612
ss5604615 PKMYT1-004309 C/T 178 rs4149788 0 16 2976679 NT_010393.17 2966679
ss5604614 PKMYT1-004069 C/T 176 rs4149787 0 16 2976919 NT_010393.17 2966919
ss5604613 PKMYT1-004033 A/G 176 rs4149786 0 16 2976955 NT_010393.17 2966955
ss5604612 PKMYT1-003950 C/T 162 rs4149785 0 16 2977038 NT_010393.17 2967038
ss5604611 PKMYT1-003820 G/T 144 rs4149784 0 16 2977168 NT_010393.17 2967168
ss5604610 PKMYT1-003720 A/G 162 rs4149783 0 16 2977268 NT_010393.17 2967268
ss5604609 PKMYT1-003693 G/T 174 rs4149782 0 16 2977295 NT_010393.17 2967295
ss5604608 PKMYT1-003688 C/G/T 174 rs4149781 0 16 2977300 NT_010393.17 2967300
ss5604607 PKMYT1-003582 A/G/T 178 rs4149780 0 16 2977406 NT_010393.17 2967406
ss5604606 PKMYT1-003573 C/T 178 rs4149779 0 16 2977415 NT_010393.17 2967415
ss5604605 PKMYT1-003443 A/G 176 rs4149778 0 16 2977545 NT_010393.17 2967545
ss5604604 PKMYT1-003416 C/T 176 rs4149777 0 16 2977572 NT_010393.17 2967572
ss5604603 PKMYT1-003359 C/G 180 rs4149776 0 16 2977629 NT_010393.17 2967629
ss5604602 PKMYT1-003291 C/T 156 rs4149775 0 16 2977697 NT_010393.17 2967697
ss5604601 PKMYT1-003245 G/T 156 rs4149774 0 16 2977743 NT_010393.17 2967743
ss5604600 PKMYT1-003176 C/T 154 rs4149773 0 16 2977812 NT_010393.17 2967812
ss5604599 PKMYT1-003103 A/T 134 rs4149772 0 16 2977885 NT_010393.17 2967885
ss5604598 PKMYT1-001643 A/G 134 rs4149771 0 16 2979345 NT_010393.17 2969345
ss5604597 PKMYT1-001227 A/G 106 rs4149770 0 16 2979761 NT_010393.17 2969761
ss5604596 PKMYT1-000959 A/G 150 rs4149769 0 16 2980029 NT_010393.17 2970029
ss5604595 PKMYT1-000905 C/G 180 rs4149768 0 16 2980083 NT_010393.17 2970083
ss5604594 PKMYT1-000568 A/C 154 rs4149767 0 16 2980420 NT_010393.17 2970420
ss5604593 PKMYT1-000390 C/G 148 rs4149766 0 16 2980598 NT_010393.17 2970598
ss5604592 PKMYT1-000295 A/G 174 rs4149765 0 16 2980693 NT_010393.17 2970693
ss5604591 PKMYT1-000224 C/G 178 rs4149764 0 16 2980764 NT_010393.17 2970764
30 of 50 subsnp's starting at ss5604620. ss# starting at ss

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