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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CAPN9-PDR90-010505
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:375


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss32478950 CAPN9-000123 A/C 174 rs28359565 0 1 230745746 NT_167186.2 7136811
ss32478951 CAPN9-000143 C/G/T 180 rs28359566 0 1 230745766 NT_167186.2 7136831
ss32478952 CAPN9-000150 A/G 180 rs28359567 0 1 230745773 NT_167186.2 7136838
ss32478953 CAPN9-000157 A/G 180 rs28359568 0 1 230745780 NT_167186.2 7136845
ss32478954 CAPN9-000289 A/G 180 rs16852535 0 1 230745912 NT_167186.2 7136977
ss32478955 CAPN9-000357 G/T 180 rs28359569 0 1 230745980 NT_167186.2 7137045
ss32478956 CAPN9-000393 C/T 180 rs10495300 0 1 230746016 NT_167186.2 7137081
ss32478957 CAPN9-000488 C/T 178 rs28359570 0 1 230746111 NT_167186.2 7137176
ss32478958 CAPN9-000507 C/T 180 rs28359571 0 1 230746130 NT_167186.2 7137195
ss32478959 CAPN9-000525 A/G 180 rs28359572 0 1 230746148 NT_167186.2 7137213
ss32478960 CAPN9-000616 -/TTTCTTTCTCTCTCTCTCT 178 rs28741084 0 1 230746239 NT_167186.2 7137304
ss32478961 CAPN9-000701 A/G 166 rs28605378 0 1 230746324 NT_167186.2 7137389
ss32478962 CAPN9-000707 C/T 166 rs28741085 0 1 230746330 NT_167186.2 7137395
ss32478963 CAPN9-000710 C/T 166 rs28741086 0 1 230746333 NT_167186.2 7137398
ss32478964 CAPN9-000739 A/G 168 rs28359573 0 1 230746362 NT_167186.2 7137427
ss32478965 CAPN9-000778 A/G 168 rs28359574 0 1 230746401 NT_167186.2 7137466
ss32478966 CAPN9-000804 C/T 168 rs28359575 0 1 230746427 NT_167186.2 7137492
ss32478967 CAPN9-000844 C/T 168 rs12095859 0 1 230746467 NT_167186.2 7137532
ss32478968 CAPN9-000879 C/T 162 rs10864778 0 1 230746502 NT_167186.2 7137567
ss32478969 CAPN9-001080 C/T 166 rs7540252 0 1 230746703 NT_167186.2 7137768
ss32478970 CAPN9-001258 A/T 178 rs28359576 0 1 230746881 NT_167186.2 7137946
ss32478971 CAPN9-001288 A/G 178 rs28359577 0 1 230746911 NT_167186.2 7137976
ss32478972 CAPN9-001431 C/G 178 rs3895369 1 1 230747054 NT_167186.2 7138119
ss32478973 CAPN9-001487 A/G 178 rs3893224 0 1 230747110 NT_167186.2 7138175
ss32478974 CAPN9-001495 A/G 178 rs28359578 0 1 230747118 NT_167186.2 7138183
ss32478975 CAPN9-001501 C/T 178 rs28359579 0 1 230747124 NT_167186.2 7138189
ss32478976 CAPN9-001528 C/G 178 rs7524562 0 1 230747151 NT_167186.2 7138216
ss32478977 CAPN9-001548 -/T 178 rs28359580 0 1 230747168 NT_167186.2 7138233
ss32478978 CAPN9-001577 G/T 178 rs3893225 0 1 230747200 NT_167186.2 7138265
ss32478979 CAPN9-001603 G/T 178 rs28359581 0 1 230747226 NT_167186.2 7138291
30 of 375 subsnp's starting at ss32478950. ss# starting at ss

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