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View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CAPN2-PDR90-120704
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:334


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SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss32474546 CAPN2-000085 A/G 178 rs28739568 0 1 223710653 NT_167186.2 101718
ss32474547 CAPN2-000229 A/G 178 rs28739569 0 1 223710797 NT_167186.2 101862
ss32474548 CAPN2-000262 C/T 178 rs28739570 0 1 223710830 NT_167186.2 101895
ss32474549 CAPN2-000329 A/G 178 rs28739571 0 1 223710897 NT_167186.2 101962
ss32474550 CAPN2-000373 A/C 176 rs28739572 0 1 223710941 NT_167186.2 102006
ss32474551 CAPN2-000415 C/T 176 rs2896828 0 1 223710983 NT_167186.2 102048
ss32474552 CAPN2-000420 C/T 174 rs12130788 0 1 223710988 NT_167186.2 102053
ss32474553 CAPN2-000715 A/G 178 rs28370002 0 1 223711283 NT_167186.2 102348
ss32474554 CAPN2-000853 A/T 172 rs7412088 0 1 223711421 NT_167186.2 102486
ss32474556 CAPN2-001147 A/T 164 rs1892076 1 1 223711715 NT_167186.2 102780
ss32474557 CAPN2-001248 A/G 164 rs4233224 1 1 223711816 NT_167186.2 102881
ss32474558 CAPN2-001289 A/C 164 rs28370003 0 1 223711857 NT_167186.2 102922
ss32474559 CAPN2-001312 A/C 168 rs28370004 0 1 223711880 NT_167186.2 102945
ss32474560 CAPN2-001539 C/T 174 rs28370005 0 1 223712107 NT_167186.2 103172
ss32474561 CAPN2-001628 C/T 178 rs28370006 0 1 223712196 NT_167186.2 103261
ss32474562 CAPN2-001860 A/C 178 rs2154114 1 1 223712428 NT_167186.2 103493
ss32474563 CAPN2-002204 C/G 178 rs28370007 0 1 223712772 NT_167186.2 103837
ss32474564 CAPN2-002216 C/T 178 rs28370008 0 1 223712784 NT_167186.2 103849
ss32474565 CAPN2-002274 A/G 178 rs2230083 0 1 223712842 NT_167186.2 103907
ss32474566 CAPN2-002342 A/G 178 rs2275877 1 1 223712910 NT_167186.2 103975
ss32474567 CAPN2-002344 A/G 178 rs2275876 1 1 223712912 NT_167186.2 103977
ss32474568 CAPN2-002525 C/T 174 rs12132879 0 1 223713093 NT_167186.2 104158
ss32474569 CAPN2-002549 A/G 174 rs7366009 0 1 223713117 NT_167186.2 104182
ss32474570 CAPN2-002940 A/G 172 rs28370010 0 1 223713508 NT_167186.2 104573
ss32474571 CAPN2-002966 G/T 172 rs28370011 0 1 223713534 NT_167186.2 104599
ss32474572 CAPN2-003227 A/G 168 rs7414311 0 1 223713795 NT_167186.2 104860
ss32474573 CAPN2-004703 A/C 174 rs28370012 0 1 223715271 NT_167186.2 106336
ss32474574 CAPN2-004742 A/G 174 rs28370013 0 1 223715310 NT_167186.2 106375
ss32474575 CAPN2-004897 A/G 172 rs28370014 0 1 223715465 NT_167186.2 106530
ss32474555 CAPN2-001055 -/ATTTT 172 rs869243153 0 N.D. N.D.
30 of 334 subsnp's starting at ss32474546. ss# starting at ss

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