Skip to main content
NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
View SNP Submission Batch
Submitter Handle:EGP_SNPS
Submitter Batch ID:CAPN6-PDR90-110104
Submitter Method ID:METHOD-E
Citation:NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
Population:PDR90
Comment:These SNPs were generated as part of the NIEHS supported grant (HL66682) for the Environmental Genome Project to develop SNP resources distributed to the research community. Please see egp.gs.washington.edu for details on how to cite this work. The first descriptor in the "Submitter SNP ID:" field indicates the HUGO assigned name of the gene studied. The second number denotes the variant base position in the listed GenBank accession number.
Batch Total SubSNP(ss) Count:89


all, sort by
SubSNP(ss) Submitter
SNP_ID
SNP
Allele
Samplesize RefSNP(rs) ss2rs
Orien
Chr ChrPos Contig
Accession
Contig
Pos
ss28531517 CAPN6-011414 C/T 178 rs16986464 1 X 111261054 NT_011651.18 48798512
ss28531516 CAPN6-011340 A/G 178 rs12010681 1 X 111261128 NT_011651.18 48798586
ss28531515 CAPN6-009916 A/C 176 rs3795192 1 X 111262552 NT_011651.18 48800010
ss28531514 CAPN6-009767 A/T 176 rs17879619 0 X 111262701 NT_011651.18 48800159
ss28531513 CAPN6-009356 C/T 172 rs17879852 0 X 111263112 NT_011651.18 48800570
ss28531512 CAPN6-009299 A/G 174 rs17883775 0 X 111263169 NT_011651.18 48800627
ss28531511 CAPN6-009204 C/T 176 rs17884003 0 X 111263264 NT_011651.18 48800722
ss28531510 CAPN6-008857 A/G 176 rs17880083 0 X 111263611 NT_011651.18 48801069
ss28531509 CAPN6-008105 C/T 176 rs17885387 0 X 111264363 NT_011651.18 48801821
ss28531508 CAPN6-008074 A/G 176 rs17885930 0 X 111264394 NT_011651.18 48801852
ss28531507 CAPN6-007491 A/C 176 rs17881159 0 X 111264977 NT_011651.18 48802435
ss28531506 CAPN6-007209 A/G 176 rs17878551 0 X 111265259 NT_011651.18 48802717
ss28531505 CAPN6-007054 C/T 178 rs17878856 0 X 111265414 NT_011651.18 48802872
ss28531504 CAPN6-007002 A/T 178 rs17879070 0 X 111265466 NT_011651.18 48802924
ss28531503 CAPN6-006806 C/T 178 rs17882996 0 X 111265662 NT_011651.18 48803120
ss28531501 CAPN6-005046 G/T 176 rs17882500 0 X 111267422 NT_011651.18 48804880
ss28531500 CAPN6-004221 C/G 176 rs7880289 1 X 111268247 NT_011651.18 48805705
ss28531499 CAPN6-004125 A/G 176 rs17886061 0 X 111268343 NT_011651.18 48805801
ss28531498 CAPN6-004079 A/G 176 rs17886540 0 X 111268389 NT_011651.18 48805847
ss28531497 CAPN6-003691 A/T 162 rs975687 1 X 111268777 NT_011651.18 48806235
ss28531496 CAPN6-003571 A/T 170 rs17879894 0 X 111268897 NT_011651.18 48806355
ss28531495 CAPN6-003433 A/G 172 rs17883801 0 X 111269035 NT_011651.18 48806493
ss28531494 CAPN6-003112 A/T 152 rs17882173 0 X 111269356 NT_011651.18 48806814
ss28531493 CAPN6-002707 A/G 170 rs17885119 0 X 111269761 NT_011651.18 48807219
ss28531492 CAPN6-002678 C/T 170 rs17882660 0 X 111269790 NT_011651.18 48807248
ss28531491 CAPN6-002334 C/T 156 rs17885638 0 X 111270134 NT_011651.18 48807592
ss28531490 CAPN6-000958 G/T 168 rs17878355 0 X 111271510 NT_011651.18 48808968
ss28531489 CAPN6-000486 A/G 170 rs17878598 0 X 111271982 NT_011651.18 48809440
ss28531488 CAPN6-000427 G/T 162 rs17878881 0 X 111272041 NT_011651.18 48809499
ss28531502 CAPN6-005158 -/CAC 176 N.D. N.D.
30 of 89 subsnp's starting at ss28531517. ss# starting at ss

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement