Submitted SNP(ss) Details: ss58929

Submitted SNP(ss) Details: ss58929

Submitter
Handle	TSC-CSHL
Submitter SNP ID	TSC0042766
RefSNP(rs#)	rs718712
Submitted Batch ID	TSC-WICGR-21-22-23-000905-RESUBMISSION
Submitted Date	Sep 06, 2000
Publication Cited	N.D.
First entry to dbSNP	Sep 6 2000 12:00:00:000AM

Resource Links
GenBank Accession	AL031683.2
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	TSC-WICGR-21-22-23
Ascertainment Samplesize	10
Population	N.D.

Allele
Observed Allele	C/T
Ancestral Allele
Allele Origin	N/A
SNP Class	SNV
CpG Code	nonCpG

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 5
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TCTAGATCTT GCTActcaaa gtgtagtcca cataccagtg gcaagagcat ca
 Y
 cagggagcac attagaaatg taagttctcg ggccctactc cagatcaact aagtcagaat
 ctACATGTTC AACAAAATTC CCAGGAGATT TGAGTGCACA TTAGAGTTTG AAAAGCATTG
 TCTTGGTGGT TGTGGAAGAT GGAGACAATC TGGAAGAAAC CATTTCAATT TCTCTCTGCC
 CCTTCCCTTT CTAAGCCAGC CTTAGGTAAT TCTCCCCTTT GACTGCCCAG ATAACTCTGG
 GTGTTGGCCC CCTAATTGGT TTTTCCTACA GGGTATCATT TACAGACATA CCTTTTGTAT
 GTAAATATCT TATTATTGCT CCCACAAAGG GATGTCACCA TTTCAACCTT CCATTCTTAA
 TA

Submitted Frequency for ss58929

There is no frequency submission for ss58929.

dbSNP summary of Genotypes for ss58929

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
Caucasian	22	22	C=0.68181819	T=0.31818181	C/C=0.45454547 C/T=0.45454547 T/T=0.09090909	Pr(chiSq=0.025,df=1) =1.000	Genotype Freq.
PDpanel	40	40	C=0.87500000	T=0.12500000	C/C=0.75000000 C/T=0.25000000	Pr(chiSq=0.096,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss58929

There is no individual genotype data for ss58929.

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