Skip to main content
NCBI
dbSNP

PubMed Nucleotide Protein Genome Structure PopSet Taxonomy OMIM Books SNP
Search for SNP on NCBI Reference Assembly
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Report in Submission Format
SNP:  Handle|local_snp_id:   HUMANGENOME_JCVI | 1103656096441
  NCBI Assay Id(ss#):    ss96009967
  Reference SNP Id(rs#): rs34860124

Batch Detail:
Submitter Handle:           HUMANGENOME_JCVI
Submitter Batch ID:         1.9
Entry Date:                 Mar 25, 2008
Molecular type:             Genomic
No. of Chromosomes sampled: 2
Synonym defined:            
Organism:                   Homo sapiens
Population:                 J. Craig Venter
Submitter Method ID:        WGS-ASSEMBLY-ATAC-MAPPING
Citation:
   1. The diploid genome sequence of an individual human.

   View citation details:[1] 
Comment:
   Whole genome shotgun sequencing and assembly was used to identify
   heterozygous variants. Human genome assembly comparison using ATAC were
   performed to identify homozygous variants.


  SubSNP Detail:
  NCBI Assay ID:       ss96009967
  Submitter SNP ID:    1103656096441
  Synonyms:            .
  LOCUSID:             Not submitted
  Submitter STS ID:    Not submitted
  STS Accession:       Not submitted
  GenBanK Accession:   ABBA01024498 NC_000003 
  Gene Name:           .
  Length:              501
  Linkout_URL:         1103656096441
  Flanking Sequence Information:

  5' Assay:   TGGAGGCTGC CATTCCCCTC CAGGGTGGCT TTGGCCACAC TCACCAGCTT CCCACTGACT
              GTGGCTGTGA GCACATCAGG CCCCCGGTCC TGGAGCTTCC CAGCCACCAC CATCTCTGAG
              CCCTTGAAGA GGAGCCGGAA GTTGTTCTGA GTGACCTCCT CCACGGCATT GCTTGGGTAC
              TCGAAGGTCA CTGCTGTCAG CAGTGGGTTG GCCACTTCCT GGTAGAAGTC CTGCAGGGTT
              GGGGGTGTCA
  Observed:   A/T
  3' Assay:   AAAGGCTGGG CTTTATGACT GCCCACTTCT CTGTGCAGCC CACCTGGGGC ACACTGGCAC
              CTGGAGCTGC AGGGCAGAGT CTGAGTCCTC ATGGATGCGC CGGGCCAGGC CGCCATTGTC
              CAGTGCCAGC TTCTCCAGGA AGGCATAGCT GACGTCGAAA CCGAAGCCCA GGCAGAAGAG
              GCTGTACCGG CCACTTACAG CTTCCCGCAC GTTATTCTGG ATGCTCCTGG GGTTAGTCTC
              CCCTGGACCC

Individual Genotype Batch:

Genotype Batch Id: 1.9

Submitter Handle:           HUMANGENOME_JCVI
Submitter Method ID:        WGS-ASSEMBLY-ATAC-MAPPING
Citation:
   1. The diploid genome sequence of an individual human.

   View citation details:[1] 

   Handle|PopulationID|IndividualID:  HUMANGENOME_JCVI|J. Craig Venter|J. CRAIG VENTER
   Allele:                            a/t |SS_STRAND_FWD

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement