Name: rs9807842
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9807842

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr19:51872954 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.036255 (12898/355760, ALFA)
A=0.123424 (32669/264690, TOPMED)
A=0.091528 (22952/250766, GnomAD_exome) (+ 25 more)
A=0.113115 (15853/140150, GnomAD)
A=0.093088 (11292/121304, ExAC)
A=0.17788 (13996/78682, PAGE_STUDY)
A=0.02244 (634/28258, 14KJPN)
A=0.02369 (397/16760, 8.3KJPN)
A=0.10326 (1343/13006, GO-ESP)
A=0.1749 (1120/6404, 1000G_30x)
A=0.1705 (854/5008, 1000G)
A=0.0304 (136/4480, Estonian)
A=0.0163 (63/3854, ALSPAC)
A=0.0140 (52/3708, TWINSUK)
A=0.0301 (88/2922, KOREAN)
A=0.1268 (264/2082, HGDP_Stanford)
A=0.1477 (275/1862, HapMap)
A=0.0306 (56/1832, Korea1K)
A=0.0761 (86/1130, Daghestan)
A=0.015 (15/998, GoNL)
A=0.035 (28/792, PRJEB37584)
A=0.049 (30/612, Vietnamese)
A=0.023 (14/600, NorthernSweden)
A=0.022 (12/534, MGP)
A=0.066 (20/304, FINRISK)
A=0.093 (20/216, Qatari)
G=0.436 (61/140, SGDP_PRJ)
A=0.00 (0/82, Ancient Sardinia)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ZNF577 : Missense Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	372192	G=0.961111	A=0.038889
European	Sub	311196	G=0.980144	A=0.019856
African	Sub	16500	G=0.73667	A=0.26333
African Others	Sub	592	G=0.691	A=0.309
African American	Sub	15908	G=0.73837	A=0.26163
Asian	Sub	6928	G=0.9495	A=0.0505
East Asian	Sub	4960	G=0.9639	A=0.0361
Other Asian	Sub	1968	G=0.9131	A=0.0869
Latin American 1	Sub	1488	G=0.8582	A=0.1418
Latin American 2	Sub	7220	G=0.8557	A=0.1443
South Asian	Sub	5218	G=0.7852	A=0.2148
Other	Sub	23642	G=0.94814	A=0.05186

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	355760	G=0.963745	A=0.036255
Allele Frequency Aggregator	European	Sub	300996	G=0.980073	A=0.019927
Allele Frequency Aggregator	Other	Sub	22204	G=0.94888	A=0.05112
Allele Frequency Aggregator	African	Sub	11706	G=0.74022	A=0.25978
Allele Frequency Aggregator	Latin American 2	Sub	7220	G=0.8557	A=0.1443
Allele Frequency Aggregator	Asian	Sub	6928	G=0.9495	A=0.0505
Allele Frequency Aggregator	South Asian	Sub	5218	G=0.7852	A=0.2148
Allele Frequency Aggregator	Latin American 1	Sub	1488	G=0.8582	A=0.1418
TopMed	Global	Study-wide	264690	G=0.876576	A=0.123424
gnomAD - Exomes	Global	Study-wide	250766	G=0.908472	A=0.091528
gnomAD - Exomes	European	Sub	134802	G=0.973962	A=0.026038
gnomAD - Exomes	Asian	Sub	48990	G=0.83239	A=0.16761
gnomAD - Exomes	American	Sub	34558	G=0.83437	A=0.16563
gnomAD - Exomes	African	Sub	16246	G=0.72504	A=0.27496
gnomAD - Exomes	Ashkenazi Jewish	Sub	10060	G=0.94016	A=0.05984
gnomAD - Exomes	Other	Sub	6110	G=0.9283	A=0.0717
gnomAD - Genomes	Global	Study-wide	140150	G=0.886885	A=0.113115
gnomAD - Genomes	European	Sub	75938	G=0.97539	A=0.02461
gnomAD - Genomes	African	Sub	41960	G=0.72855	A=0.27145
gnomAD - Genomes	American	Sub	13646	G=0.85212	A=0.14788
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.9449	A=0.0551
gnomAD - Genomes	East Asian	Sub	3132	G=0.9543	A=0.0457
gnomAD - Genomes	Other	Sub	2150	G=0.8837	A=0.1163
ExAC	Global	Study-wide	121304	G=0.906912	A=0.093088
ExAC	Europe	Sub	73306	G=0.97294	A=0.02706
ExAC	Asian	Sub	25148	G=0.82400	A=0.17600
ExAC	American	Sub	11550	G=0.82693	A=0.17307
ExAC	African	Sub	10392	G=0.72970	A=0.27030
ExAC	Other	Sub	908	G=0.919	A=0.081
The PAGE Study	Global	Study-wide	78682	G=0.82212	A=0.17788
The PAGE Study	AfricanAmerican	Sub	32504	G=0.73600	A=0.26400
The PAGE Study	Mexican	Sub	10808	G=0.85104	A=0.14896
The PAGE Study	Asian	Sub	8318	G=0.9671	A=0.0329
The PAGE Study	PuertoRican	Sub	7914	G=0.8524	A=0.1476
The PAGE Study	NativeHawaiian	Sub	4534	G=0.9296	A=0.0704
The PAGE Study	Cuban	Sub	4230	G=0.9241	A=0.0759
The PAGE Study	Dominican	Sub	3828	G=0.8294	A=0.1706
The PAGE Study	CentralAmerican	Sub	2450	G=0.7971	A=0.2029
The PAGE Study	SouthAmerican	Sub	1982	G=0.8865	A=0.1135
The PAGE Study	NativeAmerican	Sub	1260	G=0.9079	A=0.0921
The PAGE Study	SouthAsian	Sub	854	G=0.728	A=0.272
14KJPN	JAPANESE	Study-wide	28258	G=0.97756	A=0.02244
8.3KJPN	JAPANESE	Study-wide	16760	G=0.97631	A=0.02369
GO Exome Sequencing Project	Global	Study-wide	13006	G=0.89674	A=0.10326
GO Exome Sequencing Project	European American	Sub	8600	G=0.9808	A=0.0192
GO Exome Sequencing Project	African American	Sub	4406	G=0.7326	A=0.2674
1000Genomes_30x	Global	Study-wide	6404	G=0.8251	A=0.1749
1000Genomes_30x	African	Sub	1786	G=0.7027	A=0.2973
1000Genomes_30x	Europe	Sub	1266	G=0.9676	A=0.0324
1000Genomes_30x	South Asian	Sub	1202	G=0.7080	A=0.2920
1000Genomes_30x	East Asian	Sub	1170	G=0.9556	A=0.0444
1000Genomes_30x	American	Sub	980	G=0.852	A=0.148
1000Genomes	Global	Study-wide	5008	G=0.8295	A=0.1705
1000Genomes	African	Sub	1322	G=0.7057	A=0.2943
1000Genomes	East Asian	Sub	1008	G=0.9563	A=0.0437
1000Genomes	Europe	Sub	1006	G=0.9642	A=0.0358
1000Genomes	South Asian	Sub	978	G=0.708	A=0.292
1000Genomes	American	Sub	694	G=0.857	A=0.143
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.9696	A=0.0304
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.9837	A=0.0163
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.9860	A=0.0140
KOREAN population from KRGDB	KOREAN	Study-wide	2922	G=0.9699	A=0.0301
HGDP-CEPH-db Supplement 1	Global	Study-wide	2082	G=0.8732	A=0.1268
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.953	A=0.047
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.848	A=0.152
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.914	A=0.086
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.972	A=0.028
HGDP-CEPH-db Supplement 1	Africa	Sub	240	G=0.600	A=0.400
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.833	A=0.167
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=0.89	A=0.11
HapMap	Global	Study-wide	1862	G=0.8523	A=0.1477
HapMap	American	Sub	754	G=0.869	A=0.131
HapMap	African	Sub	682	G=0.761	A=0.239
HapMap	Asian	Sub	252	G=0.968	A=0.032
HapMap	Europe	Sub	174	G=0.971	A=0.029
Korean Genome Project	KOREAN	Study-wide	1832	G=0.9694	A=0.0306
Genome-wide autozygosity in Daghestan	Global	Study-wide	1130	G=0.9239	A=0.0761
Genome-wide autozygosity in Daghestan	Daghestan	Sub	624	G=0.942	A=0.058
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	G=0.931	A=0.069
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	G=0.967	A=0.033
Genome-wide autozygosity in Daghestan	Europe	Sub	108	G=0.991	A=0.009
Genome-wide autozygosity in Daghestan	South Asian	Sub	96	G=0.67	A=0.33
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	G=0.92	A=0.08
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.985	A=0.015
CNV burdens in cranial meningiomas	Global	Study-wide	792	G=0.965	A=0.035
CNV burdens in cranial meningiomas	CRM	Sub	792	G=0.965	A=0.035
A Vietnamese Genetic Variation Database	Global	Study-wide	612	G=0.951	A=0.049
Northern Sweden	ACPOP	Study-wide	600	G=0.977	A=0.023
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	G=0.978	A=0.022
FINRISK	Finnish from FINRISK project	Study-wide	304	G=0.934	A=0.066
Qatari	Global	Study-wide	216	G=0.907	A=0.093
SGDP_PRJ	Global	Study-wide	140	G=0.436	A=0.564
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	82	G=1.00	A=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 19	NC_000019.10:g.51872954G>A
GRCh37.p13 chr 19	NC_000019.9:g.52376207G>A

Gene: ZNF577, zinc finger protein 577 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ZNF577 transcript variant 3	NM_001370452.1:c.283+4328… NM_001370452.1:c.283+4328C>T	N/A	Intron Variant
ZNF577 transcript variant 8	NM_001370455.1:c.283+4328… NM_001370455.1:c.283+4328C>T	N/A	Intron Variant
ZNF577 transcript variant 9	NM_001370456.1:c.283+4328… NM_001370456.1:c.283+4328C>T	N/A	Intron Variant
ZNF577 transcript variant 10	NM_001370457.1:c.283+4328… NM_001370457.1:c.283+4328C>T	N/A	Intron Variant
ZNF577 transcript variant 4	NM_001370447.1:c.1036C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform a	NP_001357376.1:p.Arg346Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 7	NM_001370450.1:c.859C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform b	NP_001357379.1:p.Arg287Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 5	NM_001370448.1:c.1036C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform a	NP_001357377.1:p.Arg346Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 6	NM_001370449.1:c.1036C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform a	NP_001357378.1:p.Arg346Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 2	NM_001135590.2:c.859C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform b	NP_001129062.1:p.Arg287Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 1	NM_032679.3:c.1036C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform a	NP_116068.2:p.Arg346Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant 11	NR_163433.1:n.	N/A	Intron Variant
ZNF577 transcript variant X1	XM_047439550.1:c.1036C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform X1	XP_047295506.1:p.Arg346Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant X2	XM_047439551.1:c.859C>T	R [CGT] > C [TGT]	Coding Sequence Variant
zinc finger protein 577 isoform X2	XP_047295507.1:p.Arg287Cys	R (Arg) > C (Cys)	Missense Variant
ZNF577 transcript variant X3	XR_007067019.1:n.	N/A	Intron Variant
ZNF577 transcript variant X4	XR_007067020.1:n.	N/A	Intron Variant
ZNF577 transcript variant X5	XR_007067021.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 19	NC_000019.10:g.51872954=	NC_000019.10:g.51872954G>A
GRCh37.p13 chr 19	NC_000019.9:g.52376207=	NC_000019.9:g.52376207G>A
ZNF577 transcript variant 1	NM_032679.3:c.1036=	NM_032679.3:c.1036C>T
ZNF577 transcript variant 1	NM_032679.2:c.1036=	NM_032679.2:c.1036C>T
ZNF577 transcript variant 2	NM_001135590.2:c.859=	NM_001135590.2:c.859C>T
ZNF577 transcript variant 2	NM_001135590.1:c.859=	NM_001135590.1:c.859C>T
ZNF577 transcript variant X1	XM_047439550.1:c.1036=	XM_047439550.1:c.1036C>T
ZNF577 transcript variant X2	XM_047439551.1:c.859=	XM_047439551.1:c.859C>T
ZNF577 transcript variant 6	NM_001370449.1:c.1036=	NM_001370449.1:c.1036C>T
ZNF577 transcript variant 7	NM_001370450.1:c.859=	NM_001370450.1:c.859C>T
ZNF577 transcript variant 5	NM_001370448.1:c.1036=	NM_001370448.1:c.1036C>T
ZNF577 transcript variant 4	NM_001370447.1:c.1036=	NM_001370447.1:c.1036C>T
zinc finger protein 577 isoform a	NP_116068.2:p.Arg346=	NP_116068.2:p.Arg346Cys
zinc finger protein 577 isoform b	NP_001129062.1:p.Arg287=	NP_001129062.1:p.Arg287Cys
zinc finger protein 577 isoform X1	XP_047295506.1:p.Arg346=	XP_047295506.1:p.Arg346Cys
zinc finger protein 577 isoform X2	XP_047295507.1:p.Arg287=	XP_047295507.1:p.Arg287Cys
zinc finger protein 577 isoform a	NP_001357378.1:p.Arg346=	NP_001357378.1:p.Arg346Cys
zinc finger protein 577 isoform b	NP_001357379.1:p.Arg287=	NP_001357379.1:p.Arg287Cys
zinc finger protein 577 isoform a	NP_001357377.1:p.Arg346=	NP_001357377.1:p.Arg346Cys
zinc finger protein 577 isoform a	NP_001357376.1:p.Arg346=	NP_001357376.1:p.Arg346Cys
ZNF577 transcript variant 3	NM_001370452.1:c.283+4328=	NM_001370452.1:c.283+4328C>T
ZNF577 transcript variant 8	NM_001370455.1:c.283+4328=	NM_001370455.1:c.283+4328C>T
ZNF577 transcript variant 9	NM_001370456.1:c.283+4328=	NM_001370456.1:c.283+4328C>T
ZNF577 transcript variant 10	NM_001370457.1:c.283+4328=	NM_001370457.1:c.283+4328C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

149 SubSNP, 28 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	BCM_SSAHASNP	ss13639159	Dec 05, 2003 (119)
2	ABI	ss41030367	Mar 14, 2006 (126)
3	ILLUMINA	ss65730167	Oct 16, 2006 (127)
4	ILLUMINA	ss66663605	Dec 01, 2006 (127)
5	ILLUMINA	ss67946673	Dec 01, 2006 (127)
6	ILLUMINA	ss68060332	Dec 01, 2006 (127)
7	PERLEGEN	ss69230648	May 18, 2007 (127)
8	ILLUMINA	ss71625117	May 18, 2007 (127)
9	AFFY	ss74818191	Aug 16, 2007 (128)
10	ILLUMINA	ss75506439	Dec 07, 2007 (129)
11	SI_EXO	ss76893544	Dec 07, 2007 (129)
12	ILLUMINA	ss79304439	Dec 15, 2007 (130)
13	KRIBB_YJKIM	ss84854338	Dec 15, 2007 (130)
14	ILLUMINA	ss98288487	May 24, 2008 (130)
15	1000GENOMES	ss115259920	Jan 25, 2009 (130)
16	ILLUMINA	ss123040100	Dec 01, 2009 (131)
17	ILLUMINA	ss154509695	Dec 01, 2009 (131)
18	ILLUMINA	ss159683583	Dec 01, 2009 (131)
19	SEATTLESEQ	ss159740817	Dec 01, 2009 (131)
20	ILLUMINA	ss161012844	Dec 01, 2009 (131)
21	ENSEMBL	ss161883618	Dec 01, 2009 (131)
22	COMPLETE_GENOMICS	ss170040903	Jul 04, 2010 (132)
23	ILLUMINA	ss172501007	Jul 04, 2010 (132)
24	ILLUMINA	ss174898854	Jul 04, 2010 (132)
25	BUSHMAN	ss203783166	Jul 04, 2010 (132)
26	1000GENOMES	ss228181882	Jul 14, 2010 (132)
27	1000GENOMES	ss237707609	Jul 15, 2010 (132)
28	1000GENOMES	ss243906897	Jul 15, 2010 (132)
29	NHLBI-ESP	ss342507738	May 09, 2011 (134)
30	ILLUMINA	ss481979400	May 04, 2012 (137)
31	ILLUMINA	ss482013116	May 04, 2012 (137)
32	ILLUMINA	ss482966591	Sep 08, 2015 (146)
33	ILLUMINA	ss485783185	May 04, 2012 (137)
34	1000GENOMES	ss491166177	May 04, 2012 (137)
35	EXOME_CHIP	ss491552692	May 04, 2012 (137)
36	CLINSEQ_SNP	ss491773435	May 04, 2012 (137)
37	ILLUMINA	ss537628274	Sep 08, 2015 (146)
38	TISHKOFF	ss566042410	Apr 25, 2013 (138)
39	SSMP	ss661909328	Apr 25, 2013 (138)
40	ILLUMINA	ss779018837	Sep 08, 2015 (146)
41	ILLUMINA	ss780749287	Sep 08, 2015 (146)
42	ILLUMINA	ss783337466	Sep 08, 2015 (146)
43	ILLUMINA	ss783427256	Sep 08, 2015 (146)
44	ILLUMINA	ss784288966	Sep 08, 2015 (146)
45	ILLUMINA	ss825634957	Apr 01, 2015 (144)
46	ILLUMINA	ss832599297	Sep 08, 2015 (146)
47	ILLUMINA	ss833194272	Jul 13, 2019 (153)
48	ILLUMINA	ss834481420	Sep 08, 2015 (146)
49	JMKIDD_LAB	ss974507611	Aug 21, 2014 (142)
50	EVA-GONL	ss994394222	Aug 21, 2014 (142)
51	JMKIDD_LAB	ss1067593096	Aug 21, 2014 (142)
52	JMKIDD_LAB	ss1081967815	Aug 21, 2014 (142)
53	1000GENOMES	ss1363540494	Aug 21, 2014 (142)
54	HAMMER_LAB	ss1397759363	Sep 08, 2015 (146)
55	DDI	ss1428429746	Apr 01, 2015 (144)
56	EVA_FINRISK	ss1584119656	Apr 01, 2015 (144)
57	EVA_UK10K_ALSPAC	ss1638143922	Apr 01, 2015 (144)
58	EVA_UK10K_TWINSUK	ss1681137955	Apr 01, 2015 (144)
59	EVA_EXAC	ss1693768803	Apr 01, 2015 (144)
60	EVA_DECODE	ss1698448854	Apr 01, 2015 (144)
61	EVA_MGP	ss1711523184	Apr 01, 2015 (144)
62	EVA_SVP	ss1713668444	Apr 01, 2015 (144)
63	ILLUMINA	ss1752292979	Sep 08, 2015 (146)
64	ILLUMINA	ss1752292980	Sep 08, 2015 (146)
65	HAMMER_LAB	ss1809352363	Sep 08, 2015 (146)
66	ILLUMINA	ss1917941235	Feb 12, 2016 (147)
67	WEILL_CORNELL_DGM	ss1937896009	Feb 12, 2016 (147)
68	ILLUMINA	ss1946540828	Feb 12, 2016 (147)
69	ILLUMINA	ss1959878849	Feb 12, 2016 (147)
70	AMU	ss1966653370	Feb 12, 2016 (147)
71	GENOMED	ss1968659913	Jul 19, 2016 (147)
72	JJLAB	ss2029723338	Sep 14, 2016 (149)
73	HUMAN_LONGEVITY	ss2226438978	Dec 20, 2016 (150)
74	ILLUMINA	ss2633551644	Nov 08, 2017 (151)
75	GNOMAD	ss2744256089	Nov 08, 2017 (151)
76	GNOMAD	ss2750271504	Nov 08, 2017 (151)
77	GNOMAD	ss2963961611	Nov 08, 2017 (151)
78	AFFY	ss2985150973	Nov 08, 2017 (151)
79	SWEGEN	ss3017637148	Nov 08, 2017 (151)
80	ILLUMINA	ss3021920640	Nov 08, 2017 (151)
81	ILLUMINA	ss3627956286	Oct 12, 2018 (152)
82	ILLUMINA	ss3627956287	Oct 12, 2018 (152)
83	ILLUMINA	ss3631521975	Oct 12, 2018 (152)
84	ILLUMINA	ss3633183432	Oct 12, 2018 (152)
85	ILLUMINA	ss3633894212	Oct 12, 2018 (152)
86	ILLUMINA	ss3634742597	Oct 12, 2018 (152)
87	ILLUMINA	ss3634742598	Oct 12, 2018 (152)
88	ILLUMINA	ss3635580894	Oct 12, 2018 (152)
89	ILLUMINA	ss3636428839	Oct 12, 2018 (152)
90	ILLUMINA	ss3637332669	Oct 12, 2018 (152)
91	ILLUMINA	ss3638233988	Oct 12, 2018 (152)
92	ILLUMINA	ss3639121896	Oct 12, 2018 (152)
93	ILLUMINA	ss3639571792	Oct 12, 2018 (152)
94	ILLUMINA	ss3640449903	Oct 12, 2018 (152)
95	ILLUMINA	ss3640449904	Oct 12, 2018 (152)
96	ILLUMINA	ss3643206126	Oct 12, 2018 (152)
97	ILLUMINA	ss3644729370	Oct 12, 2018 (152)
98	OMUKHERJEE_ADBS	ss3646541136	Oct 12, 2018 (152)
99	ILLUMINA	ss3652347557	Oct 12, 2018 (152)
100	ILLUMINA	ss3653921929	Oct 12, 2018 (152)
101	EGCUT_WGS	ss3684372111	Jul 13, 2019 (153)
102	EVA_DECODE	ss3702959129	Jul 13, 2019 (153)
103	ILLUMINA	ss3725741004	Jul 13, 2019 (153)
104	ACPOP	ss3743122067	Jul 13, 2019 (153)
105	ILLUMINA	ss3744468538	Jul 13, 2019 (153)
106	ILLUMINA	ss3745042593	Jul 13, 2019 (153)
107	ILLUMINA	ss3745042594	Jul 13, 2019 (153)
108	EVA	ss3756174957	Jul 13, 2019 (153)
109	PAGE_CC	ss3772023240	Jul 13, 2019 (153)
110	ILLUMINA	ss3772539596	Jul 13, 2019 (153)
111	ILLUMINA	ss3772539597	Jul 13, 2019 (153)
112	KHV_HUMAN_GENOMES	ss3821425994	Jul 13, 2019 (153)
113	EVA	ss3825322543	Apr 27, 2020 (154)
114	EVA	ss3825942791	Apr 27, 2020 (154)
115	EVA	ss3835511274	Apr 27, 2020 (154)
116	HGDP	ss3847601893	Apr 27, 2020 (154)
117	SGDP_PRJ	ss3888428712	Apr 27, 2020 (154)
118	KRGDB	ss3938585414	Apr 27, 2020 (154)
119	KOGIC	ss3981569842	Apr 27, 2020 (154)
120	FSA-LAB	ss3984161602	Apr 27, 2021 (155)
121	EVA	ss3984744069	Apr 27, 2021 (155)
122	EVA	ss3985858867	Apr 27, 2021 (155)
123	EVA	ss3986811316	Apr 27, 2021 (155)
124	EVA	ss4017830041	Apr 27, 2021 (155)
125	TOPMED	ss5077940414	Apr 27, 2021 (155)
126	TOMMO_GENOMICS	ss5228222766	Apr 27, 2021 (155)
127	EVA	ss5236965139	Apr 27, 2021 (155)
128	EVA	ss5237249087	Apr 27, 2021 (155)
129	EVA	ss5237599015	Apr 27, 2021 (155)
130	1000G_HIGH_COVERAGE	ss5307601081	Oct 13, 2022 (156)
131	EVA	ss5315981841	Oct 13, 2022 (156)
132	EVA	ss5435427580	Oct 13, 2022 (156)
133	HUGCELL_USP	ss5500065682	Oct 13, 2022 (156)
134	EVA	ss5512123725	Oct 13, 2022 (156)
135	1000G_HIGH_COVERAGE	ss5613475731	Oct 13, 2022 (156)
136	SANFORD_IMAGENETICS	ss5624431485	Oct 13, 2022 (156)
137	SANFORD_IMAGENETICS	ss5662587184	Oct 13, 2022 (156)
138	TOMMO_GENOMICS	ss5787013792	Oct 13, 2022 (156)
139	EVA	ss5800011342	Oct 13, 2022 (156)
140	YY_MCH	ss5817685742	Oct 13, 2022 (156)
141	EVA	ss5840684478	Oct 13, 2022 (156)
142	EVA	ss5847498990	Oct 13, 2022 (156)
143	EVA	ss5847849849	Oct 13, 2022 (156)
144	EVA	ss5848501019	Oct 13, 2022 (156)
145	EVA	ss5852325537	Oct 13, 2022 (156)
146	EVA	ss5928470123	Oct 13, 2022 (156)
147	EVA	ss5953992305	Oct 13, 2022 (156)
148	EVA	ss5979550298	Oct 13, 2022 (156)
149	EVA	ss5981314281	Oct 13, 2022 (156)
150	1000Genomes	NC_000019.9 - 52376207	Oct 12, 2018 (152)
151	1000Genomes_30x	NC_000019.10 - 51872954	Oct 13, 2022 (156)
152	The Avon Longitudinal Study of Parents and Children	NC_000019.9 - 52376207	Oct 12, 2018 (152)
153	Genome-wide autozygosity in Daghestan	NC_000019.8 - 57068019	Apr 27, 2020 (154)
154	Genetic variation in the Estonian population	NC_000019.9 - 52376207	Oct 12, 2018 (152)
155	ExAC	NC_000019.9 - 52376207	Oct 12, 2018 (152)
156	FINRISK	NC_000019.9 - 52376207	Apr 27, 2020 (154)
157	gnomAD - Genomes	NC_000019.10 - 51872954	Apr 27, 2021 (155)
158	gnomAD - Exomes	NC_000019.9 - 52376207	Jul 13, 2019 (153)
159	GO Exome Sequencing Project	NC_000019.9 - 52376207	Oct 12, 2018 (152)
160	Genome of the Netherlands Release 5	NC_000019.9 - 52376207	Apr 27, 2020 (154)
161	HGDP-CEPH-db Supplement 1	NC_000019.8 - 57068019	Apr 27, 2020 (154)
162	HapMap	NC_000019.10 - 51872954	Apr 27, 2020 (154)
163	KOREAN population from KRGDB	NC_000019.9 - 52376207	Apr 27, 2020 (154)
164	Korean Genome Project	NC_000019.10 - 51872954	Apr 27, 2020 (154)
165	Medical Genome Project healthy controls from Spanish population	NC_000019.9 - 52376207	Apr 27, 2020 (154)
166	Northern Sweden	NC_000019.9 - 52376207	Jul 13, 2019 (153)
167	The PAGE Study	NC_000019.10 - 51872954	Jul 13, 2019 (153)
168	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000019.9 - 52376207	Apr 27, 2021 (155)
169	CNV burdens in cranial meningiomas	NC_000019.9 - 52376207	Apr 27, 2021 (155)
170	Qatari	NC_000019.9 - 52376207	Apr 27, 2020 (154)
171	SGDP_PRJ	NC_000019.9 - 52376207	Apr 27, 2020 (154)
172	8.3KJPN	NC_000019.9 - 52376207	Apr 27, 2021 (155)
173	14KJPN	NC_000019.10 - 51872954	Oct 13, 2022 (156)
174	TopMed	NC_000019.10 - 51872954	Apr 27, 2021 (155)
175	UK 10K study - Twins	NC_000019.9 - 52376207	Oct 12, 2018 (152)
176	A Vietnamese Genetic Variation Database	NC_000019.9 - 52376207	Jul 13, 2019 (153)
177	ALFA	NC_000019.10 - 51872954	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs52803741	Sep 21, 2007 (128)
rs58621483	May 24, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
228913, 279785, ss115259920, ss170040903, ss203783166, ss481979400, ss491773435, ss825634957, ss1397759363, ss1698448854, ss1713668444, ss3639121896, ss3639571792, ss3643206126, ss3847601893	NC_000019.8:57068018:G:A	NC_000019.10:51872953:G:A	(self)
76961362, 42606894, 30110359, 4285364, 116117, 13569687, 1779480, 18980194, 45762808, 638944, 16406932, 1084794, 293631, 19937931, 40445692, 86192073, 42606894, 9406303, ss228181882, ss237707609, ss243906897, ss342507738, ss482013116, ss482966591, ss485783185, ss491166177, ss491552692, ss537628274, ss566042410, ss661909328, ss779018837, ss780749287, ss783337466, ss783427256, ss784288966, ss832599297, ss833194272, ss834481420, ss974507611, ss994394222, ss1067593096, ss1081967815, ss1363540494, ss1428429746, ss1584119656, ss1638143922, ss1681137955, ss1693768803, ss1711523184, ss1752292979, ss1752292980, ss1809352363, ss1917941235, ss1937896009, ss1946540828, ss1959878849, ss1966653370, ss1968659913, ss2029723338, ss2633551644, ss2744256089, ss2750271504, ss2963961611, ss2985150973, ss3017637148, ss3021920640, ss3627956286, ss3627956287, ss3631521975, ss3633183432, ss3633894212, ss3634742597, ss3634742598, ss3635580894, ss3636428839, ss3637332669, ss3638233988, ss3640449903, ss3640449904, ss3644729370, ss3646541136, ss3652347557, ss3653921929, ss3684372111, ss3743122067, ss3744468538, ss3745042593, ss3745042594, ss3756174957, ss3772539596, ss3772539597, ss3825322543, ss3825942791, ss3835511274, ss3888428712, ss3938585414, ss3984161602, ss3984744069, ss3985858867, ss3986811316, ss4017830041, ss5228222766, ss5237599015, ss5315981841, ss5435427580, ss5512123725, ss5624431485, ss5662587184, ss5800011342, ss5840684478, ss5847498990, ss5847849849, ss5848501019, ss5953992305, ss5979550298, ss5981314281	NC_000019.9:52376206:G:A	NC_000019.10:51872953:G:A	(self)
101001666, 542767674, 1709898, 37947843, 1244709, 120850896, 293486078, 568019554, ss2226438978, ss3702959129, ss3725741004, ss3772023240, ss3821425994, ss3981569842, ss5077940414, ss5236965139, ss5237249087, ss5307601081, ss5500065682, ss5613475731, ss5787013792, ss5817685742, ss5852325537, ss5928470123	NC_000019.10:51872953:G:A	NC_000019.10:51872953:G:A	(self)
ss13639159, ss76893544	NT_011109.15:24644396:G:A	NC_000019.10:51872953:G:A	(self)
ss41030367, ss65730167, ss66663605, ss67946673, ss68060332, ss69230648, ss71625117, ss74818191, ss75506439, ss79304439, ss84854338, ss98288487, ss123040100, ss154509695, ss159683583, ss159740817, ss161012844, ss161883618, ss172501007, ss174898854	NT_011109.16:24644424:G:A	NC_000019.10:51872953:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs9807842

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs9807842