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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs6929069

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr6:7581403 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.140403 (50525/359856, ALFA)
A=0.200914 (53180/264690, TOPMED)
A=0.172255 (43268/251186, GnomAD_exome) (+ 27 more)
A=0.196122 (27468/140056, GnomAD)
A=0.172408 (20880/121108, ExAC)
A=0.25290 (19902/78696, PAGE_STUDY)
A=0.17245 (4873/28258, 14KJPN)
A=0.17148 (2874/16760, 8.3KJPN)
A=0.19414 (2525/13006, GO-ESP)
A=0.2442 (1564/6404, 1000G_30x)
A=0.2404 (1204/5008, 1000G)
A=0.1125 (504/4480, Estonian)
A=0.1347 (519/3854, ALSPAC)
A=0.1405 (521/3708, TWINSUK)
A=0.1805 (529/2930, KOREAN)
A=0.2174 (453/2084, HGDP_Stanford)
A=0.2391 (450/1882, HapMap)
A=0.1640 (186/1134, Daghestan)
A=0.117 (117/998, GoNL)
A=0.214 (169/788, PRJEB37584)
A=0.190 (119/626, Chileans)
A=0.217 (133/612, Vietnamese)
A=0.083 (50/600, NorthernSweden)
A=0.137 (73/534, MGP)
A=0.178 (54/304, FINRISK)
A=0.218 (47/216, Qatari)
G=0.431 (93/216, SGDP_PRJ)
A=0.05 (4/74, Ancient Sardinia)
A=0.10 (4/40, GENOME_DK)
G=0.43 (6/14, Siberian)
Clinical Significance
Reported in ClinVar
Gene : Consequence
DSP : Missense Variant
Publications
4 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 376336 G=0.857723 A=0.142277
European Sub 312478 G=0.873393 A=0.126607
African Sub 17200 G=0.67622 A=0.32378
African Others Sub 606 G=0.660 A=0.340
African American Sub 16594 G=0.67681 A=0.32319
Asian Sub 6982 G=0.7982 A=0.2018
East Asian Sub 4984 G=0.8122 A=0.1878
Other Asian Sub 1998 G=0.7633 A=0.2367
Latin American 1 Sub 1594 G=0.7992 A=0.2008
Latin American 2 Sub 8542 G=0.8077 A=0.1923
South Asian Sub 5236 G=0.7697 A=0.2303
Other Sub 24304 G=0.84221 A=0.15779


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 359856 G=0.859597 A=0.140403
Allele Frequency Aggregator European Sub 302282 G=0.873099 A=0.126901
Allele Frequency Aggregator Other Sub 22854 G=0.84261 A=0.15739
Allele Frequency Aggregator African Sub 12366 G=0.67734 A=0.32266
Allele Frequency Aggregator Latin American 2 Sub 8542 G=0.8077 A=0.1923
Allele Frequency Aggregator Asian Sub 6982 G=0.7982 A=0.2018
Allele Frequency Aggregator South Asian Sub 5236 G=0.7697 A=0.2303
Allele Frequency Aggregator Latin American 1 Sub 1594 G=0.7992 A=0.2008
TopMed Global Study-wide 264690 G=0.799086 A=0.200914
gnomAD - Exomes Global Study-wide 251186 G=0.827745 A=0.172255
gnomAD - Exomes European Sub 135260 G=0.869710 A=0.130290
gnomAD - Exomes Asian Sub 48978 G=0.77866 A=0.22134
gnomAD - Exomes American Sub 34528 G=0.80126 A=0.19874
gnomAD - Exomes African Sub 16224 G=0.67049 A=0.32951
gnomAD - Exomes Ashkenazi Jewish Sub 10074 G=0.84257 A=0.15743
gnomAD - Exomes Other Sub 6122 G=0.8350 A=0.1650
gnomAD - Genomes Global Study-wide 140056 G=0.803878 A=0.196122
gnomAD - Genomes European Sub 75862 G=0.86859 A=0.13141
gnomAD - Genomes African Sub 41946 G=0.67735 A=0.32265
gnomAD - Genomes American Sub 13646 G=0.82156 A=0.17844
gnomAD - Genomes Ashkenazi Jewish Sub 3324 G=0.8490 A=0.1510
gnomAD - Genomes East Asian Sub 3126 G=0.7997 A=0.2003
gnomAD - Genomes Other Sub 2152 G=0.8132 A=0.1868
ExAC Global Study-wide 121108 G=0.827592 A=0.172408
ExAC Europe Sub 73176 G=0.87216 A=0.12784
ExAC Asian Sub 25136 G=0.78131 A=0.21869
ExAC American Sub 11550 G=0.78606 A=0.21394
ExAC African Sub 10340 G=0.67263 A=0.32737
ExAC Other Sub 906 G=0.810 A=0.190
The PAGE Study Global Study-wide 78696 G=0.74710 A=0.25290
The PAGE Study AfricanAmerican Sub 32514 G=0.67931 A=0.32069
The PAGE Study Mexican Sub 10808 G=0.79497 A=0.20503
The PAGE Study Asian Sub 8318 G=0.8263 A=0.1737
The PAGE Study PuertoRican Sub 7916 G=0.8047 A=0.1953
The PAGE Study NativeHawaiian Sub 4534 G=0.6573 A=0.3427
The PAGE Study Cuban Sub 4230 G=0.8404 A=0.1596
The PAGE Study Dominican Sub 3828 G=0.7795 A=0.2205
The PAGE Study CentralAmerican Sub 2450 G=0.8400 A=0.1600
The PAGE Study SouthAmerican Sub 1982 G=0.8078 A=0.1922
The PAGE Study NativeAmerican Sub 1260 G=0.8317 A=0.1683
The PAGE Study SouthAsian Sub 856 G=0.755 A=0.245
14KJPN JAPANESE Study-wide 28258 G=0.82755 A=0.17245
8.3KJPN JAPANESE Study-wide 16760 G=0.82852 A=0.17148
GO Exome Sequencing Project Global Study-wide 13006 G=0.80586 A=0.19414
GO Exome Sequencing Project European American Sub 8600 G=0.8743 A=0.1257
GO Exome Sequencing Project African American Sub 4406 G=0.6723 A=0.3277
1000Genomes_30x Global Study-wide 6404 G=0.7558 A=0.2442
1000Genomes_30x African Sub 1786 G=0.6170 A=0.3830
1000Genomes_30x Europe Sub 1266 G=0.8697 A=0.1303
1000Genomes_30x South Asian Sub 1202 G=0.7554 A=0.2446
1000Genomes_30x East Asian Sub 1170 G=0.7949 A=0.2051
1000Genomes_30x American Sub 980 G=0.815 A=0.185
1000Genomes Global Study-wide 5008 G=0.7596 A=0.2404
1000Genomes African Sub 1322 G=0.6210 A=0.3790
1000Genomes East Asian Sub 1008 G=0.8056 A=0.1944
1000Genomes Europe Sub 1006 G=0.8648 A=0.1352
1000Genomes South Asian Sub 978 G=0.753 A=0.247
1000Genomes American Sub 694 G=0.814 A=0.186
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.8875 A=0.1125
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.8653 A=0.1347
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.8595 A=0.1405
KOREAN population from KRGDB KOREAN Study-wide 2930 G=0.8195 A=0.1805
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 G=0.7826 A=0.2174
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 G=0.777 A=0.223
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 G=0.751 A=0.249
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 G=0.814 A=0.186
HGDP-CEPH-db Supplement 1 Europe Sub 320 G=0.897 A=0.103
HGDP-CEPH-db Supplement 1 Africa Sub 242 G=0.698 A=0.302
HGDP-CEPH-db Supplement 1 America Sub 216 G=0.847 A=0.153
HGDP-CEPH-db Supplement 1 Oceania Sub 72 G=0.43 A=0.57
HapMap Global Study-wide 1882 G=0.7609 A=0.2391
HapMap American Sub 766 G=0.802 A=0.198
HapMap African Sub 686 G=0.666 A=0.334
HapMap Asian Sub 254 G=0.823 A=0.177
HapMap Europe Sub 176 G=0.864 A=0.136
Genome-wide autozygosity in Daghestan Global Study-wide 1134 G=0.8360 A=0.1640
Genome-wide autozygosity in Daghestan Daghestan Sub 628 G=0.866 A=0.134
Genome-wide autozygosity in Daghestan Near_East Sub 142 G=0.810 A=0.190
Genome-wide autozygosity in Daghestan Central Asia Sub 122 G=0.779 A=0.221
Genome-wide autozygosity in Daghestan Europe Sub 108 G=0.907 A=0.093
Genome-wide autozygosity in Daghestan South Asian Sub 98 G=0.64 A=0.36
Genome-wide autozygosity in Daghestan Caucasus Sub 36 G=0.92 A=0.08
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.883 A=0.117
CNV burdens in cranial meningiomas Global Study-wide 788 G=0.786 A=0.214
CNV burdens in cranial meningiomas CRM Sub 788 G=0.786 A=0.214
Chileans Chilean Study-wide 626 G=0.810 A=0.190
A Vietnamese Genetic Variation Database Global Study-wide 612 G=0.783 A=0.217
Northern Sweden ACPOP Study-wide 600 G=0.917 A=0.083
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 G=0.863 A=0.137
FINRISK Finnish from FINRISK project Study-wide 304 G=0.822 A=0.178
Qatari Global Study-wide 216 G=0.782 A=0.218
SGDP_PRJ Global Study-wide 216 G=0.431 A=0.569
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 74 G=0.95 A=0.05
The Danish reference pan genome Danish Study-wide 40 G=0.90 A=0.10
Siberian Global Study-wide 14 G=0.43 A=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 6 NC_000006.12:g.7581403G>A
GRCh37.p13 chr 6 NC_000006.11:g.7581636G>A
DSP RefSeqGene (LRG_423) NG_008803.1:g.44767G>A
Gene: DSP, desmoplakin (plus strand)
Molecule type Change Amino acid[Codon] SO Term
DSP transcript variant 2 NM_001008844.3:c.3583-123…

NM_001008844.3:c.3583-1239G>A

N/A Intron Variant
DSP transcript variant 3 NM_001319034.2:c.4050+116…

NM_001319034.2:c.4050+1163G>A

N/A Intron Variant
DSP transcript variant 1 NM_004415.4:c.5213G>A R [CGA] > Q [CAA] Coding Sequence Variant
desmoplakin isoform I NP_004406.2:p.Arg1738Gln R (Arg) > Q (Gln) Missense Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: A (allele ID: 54092 )
ClinVar Accession Disease Names Clinical Significance
RCV000038061.16 not specified Benign
RCV000275007.4 Lethal acantholytic epidermolysis bullosa Benign
RCV000330163.4 Skin fragility-woolly hair-palmoplantar keratoderma syndrome Benign
RCV000356673.4 Arrhythmogenic right ventricular dysplasia 8 Benign
RCV000430654.5 not provided Benign
RCV000620084.2 Cardiovascular phenotype Benign
RCV000771053.2 Cardiomyopathy Benign
RCV001510664.5 Arrhythmogenic cardiomyopathy with woolly hair and keratoderma,Arrhythmogenic right ventricular dysplasia 8 Benign
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A
GRCh38.p14 chr 6 NC_000006.12:g.7581403= NC_000006.12:g.7581403G>A
GRCh37.p13 chr 6 NC_000006.11:g.7581636= NC_000006.11:g.7581636G>A
DSP RefSeqGene (LRG_423) NG_008803.1:g.44767= NG_008803.1:g.44767G>A
DSP transcript variant 1 NM_004415.4:c.5213= NM_004415.4:c.5213G>A
DSP transcript variant 1 NM_004415.3:c.5213= NM_004415.3:c.5213G>A
DSP transcript variant 1 NM_004415.2:c.5213= NM_004415.2:c.5213G>A
desmoplakin isoform I NP_004406.2:p.Arg1738= NP_004406.2:p.Arg1738Gln
DSP transcript variant 2 NM_001008844.1:c.3583-1239= NM_001008844.1:c.3583-1239G>A
DSP transcript variant 2 NM_001008844.3:c.3583-1239= NM_001008844.3:c.3583-1239G>A
DSP transcript variant 3 NM_001319034.2:c.4050+1163= NM_001319034.2:c.4050+1163G>A
DSP transcript variant X1 XM_005248864.1:c.4050+1163= XM_005248864.1:c.4050+1163G>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

158 SubSNP, 30 Frequency, 8 ClinVar submissions
No Submitter Submission ID Date (Build)
1 BCM_SSAHASNP ss10324971 Jul 11, 2003 (116)
2 PERLEGEN ss23293421 Sep 20, 2004 (123)
3 APPLERA_GI ss48405613 Mar 15, 2006 (126)
4 ILLUMINA ss66592588 Nov 29, 2006 (127)
5 ILLUMINA ss67517622 Nov 29, 2006 (127)
6 ILLUMINA ss67883327 Nov 29, 2006 (127)
7 PERLEGEN ss68964247 May 17, 2007 (127)
8 ILLUMINA ss70896233 May 26, 2008 (130)
9 ILLUMINA ss71490509 May 17, 2007 (127)
10 SI_EXO ss71644571 May 17, 2007 (127)
11 AFFY ss74815726 Aug 16, 2007 (128)
12 ILLUMINA ss74914911 Dec 07, 2007 (129)
13 AFFY ss76826892 Dec 07, 2007 (129)
14 ILLUMINA ss79239015 Dec 16, 2007 (130)
15 KRIBB_YJKIM ss80738140 Dec 16, 2007 (130)
16 KRIBB_YJKIM ss84577578 Dec 16, 2007 (130)
17 1000GENOMES ss113862447 Jan 25, 2009 (130)
18 ILLUMINA ss122649267 Dec 01, 2009 (131)
19 ILLUMINA ss154392497 Dec 01, 2009 (131)
20 GMI ss156496928 Dec 01, 2009 (131)
21 ILLUMINA ss159568072 Dec 01, 2009 (131)
22 SEATTLESEQ ss159711203 Dec 01, 2009 (131)
23 ILLUMINA ss160826497 Dec 01, 2009 (131)
24 COMPLETE_GENOMICS ss163112548 Jul 04, 2010 (132)
25 ILLUMINA ss172219383 Jul 04, 2010 (132)
26 ILLUMINA ss174170924 Jul 04, 2010 (132)
27 BUSHMAN ss201386751 Jul 04, 2010 (132)
28 1000GENOMES ss222194033 Jul 14, 2010 (132)
29 1000GENOMES ss233312855 Jul 14, 2010 (132)
30 1000GENOMES ss240400421 Jul 15, 2010 (132)
31 ILLUMINA ss244307091 Jul 04, 2010 (132)
32 GMI ss278641898 May 04, 2012 (137)
33 NHLBI-ESP ss342200912 May 09, 2011 (134)
34 ILLUMINA ss481403041 May 04, 2012 (137)
35 ILLUMINA ss481429718 May 04, 2012 (137)
36 ILLUMINA ss482409225 Sep 08, 2015 (146)
37 ILLUMINA ss485496459 May 04, 2012 (137)
38 1000GENOMES ss490919205 May 04, 2012 (137)
39 EXOME_CHIP ss491377489 May 04, 2012 (137)
40 CLINSEQ_SNP ss491880428 May 04, 2012 (137)
41 ILLUMINA ss537411398 Sep 08, 2015 (146)
42 TISHKOFF ss558987273 Apr 25, 2013 (138)
43 SSMP ss652896296 Apr 25, 2013 (138)
44 ILLUMINA ss778585721 Sep 08, 2015 (146)
45 ILLUMINA ss783193776 Sep 08, 2015 (146)
46 ILLUMINA ss783528893 Sep 08, 2015 (146)
47 ILLUMINA ss784148874 Sep 08, 2015 (146)
48 ILLUMINA ss825569533 Apr 01, 2015 (144)
49 ILLUMINA ss832453637 Sep 08, 2015 (146)
50 ILLUMINA ss833079189 Jul 13, 2019 (153)
51 ILLUMINA ss834042870 Sep 08, 2015 (146)
52 EVA-GONL ss982556130 Aug 21, 2014 (142)
53 JMKIDD_LAB ss1067475155 Aug 21, 2014 (142)
54 JMKIDD_LAB ss1073359963 Aug 21, 2014 (142)
55 1000GENOMES ss1318863169 Aug 21, 2014 (142)
56 HAMMER_LAB ss1397440181 Sep 08, 2015 (146)
57 DDI ss1430629324 Apr 01, 2015 (144)
58 EVA_GENOME_DK ss1581520909 Apr 01, 2015 (144)
59 EVA_FINRISK ss1584043626 Apr 01, 2015 (144)
60 EVA_DECODE ss1592103324 Apr 01, 2015 (144)
61 EVA_UK10K_ALSPAC ss1614891621 Apr 01, 2015 (144)
62 EVA_UK10K_TWINSUK ss1657885654 Apr 01, 2015 (144)
63 EVA_EXAC ss1688151631 Apr 01, 2015 (144)
64 EVA_MGP ss1711111512 Apr 01, 2015 (144)
65 EVA_SVP ss1712833570 Apr 01, 2015 (144)
66 ILLUMINA ss1752647541 Sep 08, 2015 (146)
67 ILLUMINA ss1752647542 Sep 08, 2015 (146)
68 HAMMER_LAB ss1804268287 Sep 08, 2015 (146)
69 EVA_MCP ss1815616731 Sep 08, 2015 (146)
70 ILLUMINA ss1917799086 Feb 12, 2016 (147)
71 WEILL_CORNELL_DGM ss1925814234 Feb 12, 2016 (147)
72 ILLUMINA ss1946166802 Feb 12, 2016 (147)
73 ILLUMINA ss1958860696 Feb 12, 2016 (147)
74 GENOMED ss1970303804 Jul 19, 2016 (147)
75 JJLAB ss2023522771 Sep 14, 2016 (149)
76 USC_VALOUEV ss2151685468 Dec 20, 2016 (150)
77 HUMAN_LONGEVITY ss2281555132 Dec 20, 2016 (150)
78 SYSTEMSBIOZJU ss2626249199 Nov 08, 2017 (151)
79 ILLUMINA ss2634396360 Nov 08, 2017 (151)
80 ILLUMINA ss2635153468 Nov 08, 2017 (151)
81 GRF ss2707271039 Nov 08, 2017 (151)
82 GNOMAD ss2735528500 Nov 08, 2017 (151)
83 GNOMAD ss2747543663 Nov 08, 2017 (151)
84 GNOMAD ss2835485557 Nov 08, 2017 (151)
85 AFFY ss2985352769 Nov 08, 2017 (151)
86 AFFY ss2985980780 Nov 08, 2017 (151)
87 SWEGEN ss2998472418 Nov 08, 2017 (151)
88 ILLUMINA ss3022572295 Nov 08, 2017 (151)
89 BIOINF_KMB_FNS_UNIBA ss3025545877 Nov 08, 2017 (151)
90 CSHL ss3346824011 Nov 08, 2017 (151)
91 ILLUMINA ss3629437908 Oct 12, 2018 (152)
92 ILLUMINA ss3632316838 Oct 12, 2018 (152)
93 ILLUMINA ss3633405138 Oct 12, 2018 (152)
94 ILLUMINA ss3634127108 Oct 12, 2018 (152)
95 ILLUMINA ss3635043099 Oct 12, 2018 (152)
96 ILLUMINA ss3635043100 Oct 12, 2018 (152)
97 ILLUMINA ss3635808457 Oct 12, 2018 (152)
98 ILLUMINA ss3636757771 Oct 12, 2018 (152)
99 ILLUMINA ss3637561172 Oct 12, 2018 (152)
100 ILLUMINA ss3638605503 Oct 12, 2018 (152)
101 ILLUMINA ss3639305455 Oct 12, 2018 (152)
102 ILLUMINA ss3639677644 Oct 12, 2018 (152)
103 ILLUMINA ss3640750394 Oct 12, 2018 (152)
104 ILLUMINA ss3640750395 Oct 12, 2018 (152)
105 ILLUMINA ss3643547396 Oct 12, 2018 (152)
106 ILLUMINA ss3644899862 Oct 12, 2018 (152)
107 OMUKHERJEE_ADBS ss3646330535 Oct 12, 2018 (152)
108 ILLUMINA ss3653080252 Oct 12, 2018 (152)
109 ILLUMINA ss3654121062 Oct 12, 2018 (152)
110 EGCUT_WGS ss3666396780 Jul 13, 2019 (153)
111 EVA_DECODE ss3716529466 Jul 13, 2019 (153)
112 ILLUMINA ss3726308167 Jul 13, 2019 (153)
113 ACPOP ss3733179429 Jul 13, 2019 (153)
114 ILLUMINA ss3744545521 Jul 13, 2019 (153)
115 ILLUMINA ss3745343206 Jul 13, 2019 (153)
116 ILLUMINA ss3745343207 Jul 13, 2019 (153)
117 EVA ss3764579216 Jul 13, 2019 (153)
118 PAGE_CC ss3771260730 Jul 13, 2019 (153)
119 ILLUMINA ss3772837024 Jul 13, 2019 (153)
120 ILLUMINA ss3772837025 Jul 13, 2019 (153)
121 KHV_HUMAN_GENOMES ss3807740665 Jul 13, 2019 (153)
122 EVA ss3824154018 Apr 26, 2020 (154)
123 EVA ss3825689467 Apr 26, 2020 (154)
124 EVA ss3836378095 Apr 26, 2020 (154)
125 EVA ss3838333732 Apr 26, 2020 (154)
126 EVA ss3843773775 Apr 26, 2020 (154)
127 HGDP ss3847821885 Apr 26, 2020 (154)
128 SGDP_PRJ ss3863862016 Apr 26, 2020 (154)
129 KRGDB ss3910600170 Apr 26, 2020 (154)
130 FSA-LAB ss3984328526 Apr 26, 2021 (155)
131 FSA-LAB ss3984328527 Apr 26, 2021 (155)
132 EVA ss3984561047 Apr 26, 2021 (155)
133 EVA ss3985197805 Apr 26, 2021 (155)
134 EVA ss3986335353 Apr 26, 2021 (155)
135 EVA ss4017253720 Apr 26, 2021 (155)
136 TOPMED ss4692744119 Apr 26, 2021 (155)
137 TOMMO_GENOMICS ss5176037050 Apr 26, 2021 (155)
138 EVA ss5237019624 Apr 26, 2021 (155)
139 EVA ss5237645103 Oct 13, 2022 (156)
140 1000G_HIGH_COVERAGE ss5267304925 Oct 13, 2022 (156)
141 TRAN_CS_UWATERLOO ss5314415008 Oct 13, 2022 (156)
142 EVA ss5315119935 Oct 13, 2022 (156)
143 EVA ss5363634561 Oct 13, 2022 (156)
144 HUGCELL_USP ss5465105159 Oct 13, 2022 (156)
145 EVA ss5508337957 Oct 13, 2022 (156)
146 1000G_HIGH_COVERAGE ss5552683387 Oct 13, 2022 (156)
147 SANFORD_IMAGENETICS ss5639713322 Oct 13, 2022 (156)
148 TOMMO_GENOMICS ss5713668907 Oct 13, 2022 (156)
149 EVA ss5799675273 Oct 13, 2022 (156)
150 EVA ss5800055021 Oct 13, 2022 (156)
151 EVA ss5800127104 Oct 13, 2022 (156)
152 YY_MCH ss5807128042 Oct 13, 2022 (156)
153 EVA ss5841756152 Oct 13, 2022 (156)
154 EVA ss5848079974 Oct 13, 2022 (156)
155 EVA ss5848645089 Oct 13, 2022 (156)
156 EVA ss5855190462 Oct 13, 2022 (156)
157 EVA ss5882544209 Oct 13, 2022 (156)
158 EVA ss5968209164 Oct 13, 2022 (156)
159 1000Genomes NC_000006.11 - 7581636 Oct 12, 2018 (152)
160 1000Genomes_30x NC_000006.12 - 7581403 Oct 13, 2022 (156)
161 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 7581636 Oct 12, 2018 (152)
162 Chileans NC_000006.11 - 7581636 Apr 26, 2020 (154)
163 Genome-wide autozygosity in Daghestan NC_000006.10 - 7526635 Apr 26, 2020 (154)
164 Genetic variation in the Estonian population NC_000006.11 - 7581636 Oct 12, 2018 (152)
165 ExAC NC_000006.11 - 7581636 Oct 12, 2018 (152)
166 FINRISK NC_000006.11 - 7581636 Apr 26, 2020 (154)
167 The Danish reference pan genome NC_000006.11 - 7581636 Apr 26, 2020 (154)
168 gnomAD - Genomes NC_000006.12 - 7581403 Apr 26, 2021 (155)
169 gnomAD - Exomes NC_000006.11 - 7581636 Jul 13, 2019 (153)
170 GO Exome Sequencing Project NC_000006.11 - 7581636 Oct 12, 2018 (152)
171 Genome of the Netherlands Release 5 NC_000006.11 - 7581636 Apr 26, 2020 (154)
172 HGDP-CEPH-db Supplement 1 NC_000006.10 - 7526635 Apr 26, 2020 (154)
173 HapMap NC_000006.12 - 7581403 Apr 26, 2020 (154)
174 KOREAN population from KRGDB NC_000006.11 - 7581636 Apr 26, 2020 (154)
175 Medical Genome Project healthy controls from Spanish population NC_000006.11 - 7581636 Apr 26, 2020 (154)
176 Northern Sweden NC_000006.11 - 7581636 Jul 13, 2019 (153)
177 The PAGE Study NC_000006.12 - 7581403 Jul 13, 2019 (153)
178 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000006.11 - 7581636 Apr 26, 2021 (155)
179 CNV burdens in cranial meningiomas NC_000006.11 - 7581636 Apr 26, 2021 (155)
180 Qatari NC_000006.11 - 7581636 Apr 26, 2020 (154)
181 SGDP_PRJ NC_000006.11 - 7581636 Apr 26, 2020 (154)
182 Siberian NC_000006.11 - 7581636 Apr 26, 2020 (154)
183 8.3KJPN NC_000006.11 - 7581636 Apr 26, 2021 (155)
184 14KJPN NC_000006.12 - 7581403 Oct 13, 2022 (156)
185 TopMed NC_000006.12 - 7581403 Apr 26, 2021 (155)
186 UK 10K study - Twins NC_000006.11 - 7581636 Oct 12, 2018 (152)
187 A Vietnamese Genetic Variation Database NC_000006.11 - 7581636 Jul 13, 2019 (153)
188 ALFA NC_000006.12 - 7581403 Apr 26, 2021 (155)
189 ClinVar RCV000038061.16 Oct 13, 2022 (156)
190 ClinVar RCV000275007.4 Oct 13, 2022 (156)
191 ClinVar RCV000330163.4 Oct 13, 2022 (156)
192 ClinVar RCV000356673.4 Oct 13, 2022 (156)
193 ClinVar RCV000430654.5 Oct 13, 2022 (156)
194 ClinVar RCV000620084.2 Oct 13, 2022 (156)
195 ClinVar RCV000771053.2 Oct 13, 2022 (156)
196 ClinVar RCV001510664.5 Oct 13, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs52837086 Sep 21, 2007 (128)
rs61346221 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss3639305455, ss3639677644 NC_000006.9:7526634:G:A NC_000006.12:7581402:G:A (self)
414892, 499777, ss76826892, ss113862447, ss163112548, ss201386751, ss278641898, ss481403041, ss491880428, ss825569533, ss1397440181, ss1592103324, ss1712833570, ss2635153468, ss3643547396, ss3847821885 NC_000006.10:7526634:G:A NC_000006.12:7581402:G:A (self)
30601849, 17037686, 370413, 12135028, 8169722, 40087, 7685848, 4664289, 612071, 7561842, 17777564, 227272, 6464294, 423732, 110422, 7856164, 15878996, 4201822, 34006357, 17037686, 3772768, ss222194033, ss233312855, ss240400421, ss342200912, ss481429718, ss482409225, ss485496459, ss490919205, ss491377489, ss537411398, ss558987273, ss652896296, ss778585721, ss783193776, ss783528893, ss784148874, ss832453637, ss833079189, ss834042870, ss982556130, ss1067475155, ss1073359963, ss1318863169, ss1430629324, ss1581520909, ss1584043626, ss1614891621, ss1657885654, ss1688151631, ss1711111512, ss1752647541, ss1752647542, ss1804268287, ss1815616731, ss1917799086, ss1925814234, ss1946166802, ss1958860696, ss1970303804, ss2023522771, ss2151685468, ss2626249199, ss2634396360, ss2707271039, ss2735528500, ss2747543663, ss2835485557, ss2985352769, ss2985980780, ss2998472418, ss3022572295, ss3346824011, ss3629437908, ss3632316838, ss3633405138, ss3634127108, ss3635043099, ss3635043100, ss3635808457, ss3636757771, ss3637561172, ss3638605503, ss3640750394, ss3640750395, ss3644899862, ss3646330535, ss3653080252, ss3654121062, ss3666396780, ss3733179429, ss3744545521, ss3745343206, ss3745343207, ss3764579216, ss3772837024, ss3772837025, ss3824154018, ss3825689467, ss3836378095, ss3838333732, ss3863862016, ss3910600170, ss3984328526, ss3984328527, ss3984561047, ss3985197805, ss3986335353, ss4017253720, ss5176037050, ss5315119935, ss5363634561, ss5508337957, ss5639713322, ss5799675273, ss5800055021, ss5800127104, ss5841756152, ss5848079974, ss5848645089, ss5968209164 NC_000006.11:7581635:G:A NC_000006.12:7581402:G:A (self)
RCV000038061.16, RCV000275007.4, RCV000330163.4, RCV000356673.4, RCV000430654.5, RCV000620084.2, RCV000771053.2, RCV001510664.5, 40209322, 216320861, 3054781, 482199, 47506011, 530121677, 7060965881, ss2281555132, ss3025545877, ss3716529466, ss3726308167, ss3771260730, ss3807740665, ss3843773775, ss4692744119, ss5237019624, ss5237645103, ss5267304925, ss5314415008, ss5465105159, ss5552683387, ss5713668907, ss5807128042, ss5855190462, ss5882544209 NC_000006.12:7581402:G:A NC_000006.12:7581402:G:A (self)
ss23293421, ss48405613, ss66592588, ss67517622, ss67883327, ss68964247, ss70896233, ss71490509, ss71644571, ss74815726, ss74914911, ss79239015, ss80738140, ss84577578, ss122649267, ss154392497, ss156496928, ss159568072, ss159711203, ss160826497, ss172219383, ss174170924, ss244307091 NT_007592.15:7521635:G:A NC_000006.12:7581402:G:A (self)
ss10324971 NT_034880.2:7521634:G:A NC_000006.12:7581402:G:A (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

4 citations for rs6929069
PMID Title Author Year Journal
17332845 Meta-analysis in genome-wide association datasets: strategies and application in Parkinson disease. Evangelou E et al. 2007 PloS one
23861362 Interpreting secondary cardiac disease variants in an exome cohort. Ng D et al. 2013 Circulation. Cardiovascular genetics
24033266 A systematic approach to assessing the clinical significance of genetic variants. Duzkale H et al. 2013 Clinical genetics
25741868 Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Richards S et al. 2015 Genetics in medicine
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07