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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9432025

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr1:231871978 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.493422 (130604/264690, TOPMED)
A=0.43031 (7212/16760, 8.3KJPN)
C=0.35345 (3842/10870, ALFA) (+ 15 more)
A=0.4895 (3135/6404, 1000G_30x)
A=0.4894 (2451/5008, 1000G)
C=0.4335 (1942/4480, Estonian)
C=0.4785 (1844/3854, ALSPAC)
C=0.4676 (1734/3708, TWINSUK)
A=0.4863 (1425/2930, KOREAN)
A=0.4754 (871/1832, Korea1K)
C=0.477 (476/998, GoNL)
C=0.332 (199/600, NorthernSweden)
A=0.323 (133/412, SGDP_PRJ)
A=0.476 (156/328, HapMap)
A=0.421 (91/216, Qatari)
C=0.373 (79/212, Vietnamese)
A=0.42 (17/40, GENOME_DK)
A=0.42 (17/40, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
DISC1 : Intron Variant
TSNAX-DISC1 : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 10870 A=0.64655 C=0.35345, T=0.00000
European Sub 9168 A=0.6331 C=0.3669, T=0.0000
African Sub 1112 A=0.6790 C=0.3210, T=0.0000
African Others Sub 50 A=0.72 C=0.28, T=0.00
African American Sub 1062 A=0.6770 C=0.3230, T=0.0000
Asian Sub 40 A=0.88 C=0.12, T=0.00
East Asian Sub 30 A=0.87 C=0.13, T=0.00
Other Asian Sub 10 A=0.9 C=0.1, T=0.0
Latin American 1 Sub 48 A=1.00 C=0.00, T=0.00
Latin American 2 Sub 148 A=1.000 C=0.000, T=0.000
South Asian Sub 10 A=0.8 C=0.2, T=0.0
Other Sub 344 A=0.669 C=0.331, T=0.000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.493422 C=0.506578
8.3KJPN JAPANESE Study-wide 16760 A=0.43031 C=0.56969
Allele Frequency Aggregator Total Global 10870 A=0.64655 C=0.35345, T=0.00000
Allele Frequency Aggregator European Sub 9168 A=0.6331 C=0.3669, T=0.0000
Allele Frequency Aggregator African Sub 1112 A=0.6790 C=0.3210, T=0.0000
Allele Frequency Aggregator Other Sub 344 A=0.669 C=0.331, T=0.000
Allele Frequency Aggregator Latin American 2 Sub 148 A=1.000 C=0.000, T=0.000
Allele Frequency Aggregator Latin American 1 Sub 48 A=1.00 C=0.00, T=0.00
Allele Frequency Aggregator Asian Sub 40 A=0.88 C=0.12, T=0.00
Allele Frequency Aggregator South Asian Sub 10 A=0.8 C=0.2, T=0.0
1000Genomes_30x Global Study-wide 6404 A=0.4895 C=0.5105
1000Genomes_30x African Sub 1786 A=0.4401 C=0.5599
1000Genomes_30x Europe Sub 1266 A=0.5182 C=0.4818
1000Genomes_30x South Asian Sub 1202 A=0.4925 C=0.5075
1000Genomes_30x East Asian Sub 1170 A=0.5521 C=0.4479
1000Genomes_30x American Sub 980 A=0.464 C=0.536
1000Genomes Global Study-wide 5008 A=0.4894 C=0.5106
1000Genomes African Sub 1322 A=0.4297 C=0.5703
1000Genomes East Asian Sub 1008 A=0.5466 C=0.4534
1000Genomes Europe Sub 1006 A=0.5278 C=0.4722
1000Genomes South Asian Sub 978 A=0.480 C=0.520
1000Genomes American Sub 694 A=0.478 C=0.522
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.5665 C=0.4335
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.5215 C=0.4785
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.5324 C=0.4676
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.4863 C=0.5137, G=0.0000, T=0.0000
Korean Genome Project KOREAN Study-wide 1832 A=0.4754 C=0.5246
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.523 C=0.477
Northern Sweden ACPOP Study-wide 600 A=0.668 C=0.332
SGDP_PRJ Global Study-wide 412 A=0.323 C=0.677
HapMap Global Study-wide 328 A=0.476 C=0.524
HapMap African Sub 120 A=0.442 C=0.558
HapMap American Sub 118 A=0.508 C=0.492
HapMap Asian Sub 90 A=0.48 C=0.52
Qatari Global Study-wide 216 A=0.421 C=0.579
A Vietnamese Genetic Variation Database Global Study-wide 212 A=0.627 C=0.373
The Danish reference pan genome Danish Study-wide 40 A=0.42 C=0.57
Siberian Global Study-wide 40 A=0.42 C=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.231871978A>C
GRCh38.p14 chr 1 NC_000001.11:g.231871978A>G
GRCh38.p14 chr 1 NC_000001.11:g.231871978A>T
GRCh37.p13 chr 1 NC_000001.10:g.232007724A>C
GRCh37.p13 chr 1 NC_000001.10:g.232007724A>G
GRCh37.p13 chr 1 NC_000001.10:g.232007724A>T
DISC1 RefSeqGene NG_011681.2:g.250164A>C
DISC1 RefSeqGene NG_011681.2:g.250164A>G
DISC1 RefSeqGene NG_011681.2:g.250164A>T
Gene: DISC1, DISC1 scaffold protein (plus strand)
Molecule type Change Amino acid[Codon] SO Term
DISC1 transcript variant Lv NM_001012957.2:c.1981+534…

NM_001012957.2:c.1981+53461A>C

 		N/A Intron Variant
DISC1 transcript variant a NM_001164537.2:c.2077+534…

NM_001164537.2:c.2077+53461A>C

 		N/A Intron Variant
DISC1 transcript variant b NM_001164538.2:c.1981+534…

NM_001164538.2:c.1981+53461A>C

 		N/A Intron Variant
DISC1 transcript variant d NM_001164540.2:c.1615+534…

NM_001164540.2:c.1615+53461A>C

 		N/A Intron Variant
DISC1 transcript variant e NM_001164541.2:c.1981+534…

NM_001164541.2:c.1981+53461A>C

 		N/A Intron Variant
DISC1 transcript variant f NM_001164542.2:c.1981+534…

NM_001164542.2:c.1981+53461A>C

 		N/A Intron Variant
DISC1 transcript variant i NM_001164546.2:c.1635-868…

NM_001164546.2:c.1635-86850A>C

 		N/A Intron Variant
DISC1 transcript variant j NM_001164547.2:c.1635-868…

NM_001164547.2:c.1635-86850A>C

 		N/A Intron Variant
DISC1 transcript variant L NM_018662.3:c.1981+53461A…

NM_018662.3:c.1981+53461A>C

 		N/A Intron Variant
DISC1 transcript variant Es NM_001012958.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant S NM_001012959.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant c NM_001164539.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant g NM_001164544.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant h NM_001164545.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant k NM_001164548.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant l NM_001164549.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant m NM_001164550.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant n NM_001164551.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant o NM_001164552.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant p NM_001164553.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant q NM_001164554.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant r NM_001164555.2:c. N/A Genic Downstream Transcript Variant
DISC1 transcript variant t NM_001164556.2:c. N/A Genic Downstream Transcript Variant
Gene: TSNAX-DISC1, TSNAX-DISC1 readthrough (NMD candidate) (plus strand)
Molecule type Change Amino acid[Codon] SO Term
TSNAX-DISC1 transcript variant 1 NR_028393.1:n. N/A Intron Variant
TSNAX-DISC1 transcript variant 2 NR_028394.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 3 NR_028395.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 4 NR_028396.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 5 NR_028397.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 6 NR_028398.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 7 NR_028399.1:n. N/A Genic Downstream Transcript Variant
TSNAX-DISC1 transcript variant 8 NR_028400.1:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G T
GRCh38.p14 chr 1 NC_000001.11:g.231871978= NC_000001.11:g.231871978A>C NC_000001.11:g.231871978A>G NC_000001.11:g.231871978A>T
GRCh37.p13 chr 1 NC_000001.10:g.232007724= NC_000001.10:g.232007724A>C NC_000001.10:g.232007724A>G NC_000001.10:g.232007724A>T
DISC1 RefSeqGene NG_011681.2:g.250164= NG_011681.2:g.250164A>C NG_011681.2:g.250164A>G NG_011681.2:g.250164A>T
DISC1 transcript variant Lv NM_001012957.1:c.1981+53461= NM_001012957.1:c.1981+53461A>C NM_001012957.1:c.1981+53461A>G NM_001012957.1:c.1981+53461A>T
DISC1 transcript variant Lv NM_001012957.2:c.1981+53461= NM_001012957.2:c.1981+53461A>C NM_001012957.2:c.1981+53461A>G NM_001012957.2:c.1981+53461A>T
DISC1 transcript variant a NM_001164537.1:c.2077+53461= NM_001164537.1:c.2077+53461A>C NM_001164537.1:c.2077+53461A>G NM_001164537.1:c.2077+53461A>T
DISC1 transcript variant a NM_001164537.2:c.2077+53461= NM_001164537.2:c.2077+53461A>C NM_001164537.2:c.2077+53461A>G NM_001164537.2:c.2077+53461A>T
DISC1 transcript variant b NM_001164538.1:c.1981+53461= NM_001164538.1:c.1981+53461A>C NM_001164538.1:c.1981+53461A>G NM_001164538.1:c.1981+53461A>T
DISC1 transcript variant b NM_001164538.2:c.1981+53461= NM_001164538.2:c.1981+53461A>C NM_001164538.2:c.1981+53461A>G NM_001164538.2:c.1981+53461A>T
DISC1 transcript variant d NM_001164540.1:c.1615+53461= NM_001164540.1:c.1615+53461A>C NM_001164540.1:c.1615+53461A>G NM_001164540.1:c.1615+53461A>T
DISC1 transcript variant d NM_001164540.2:c.1615+53461= NM_001164540.2:c.1615+53461A>C NM_001164540.2:c.1615+53461A>G NM_001164540.2:c.1615+53461A>T
DISC1 transcript variant e NM_001164541.1:c.1981+53461= NM_001164541.1:c.1981+53461A>C NM_001164541.1:c.1981+53461A>G NM_001164541.1:c.1981+53461A>T
DISC1 transcript variant e NM_001164541.2:c.1981+53461= NM_001164541.2:c.1981+53461A>C NM_001164541.2:c.1981+53461A>G NM_001164541.2:c.1981+53461A>T
DISC1 transcript variant f NM_001164542.1:c.1981+53461= NM_001164542.1:c.1981+53461A>C NM_001164542.1:c.1981+53461A>G NM_001164542.1:c.1981+53461A>T
DISC1 transcript variant f NM_001164542.2:c.1981+53461= NM_001164542.2:c.1981+53461A>C NM_001164542.2:c.1981+53461A>G NM_001164542.2:c.1981+53461A>T
DISC1 transcript variant i NM_001164546.1:c.1635-86850= NM_001164546.1:c.1635-86850A>C NM_001164546.1:c.1635-86850A>G NM_001164546.1:c.1635-86850A>T
DISC1 transcript variant i NM_001164546.2:c.1635-86850= NM_001164546.2:c.1635-86850A>C NM_001164546.2:c.1635-86850A>G NM_001164546.2:c.1635-86850A>T
DISC1 transcript variant j NM_001164547.1:c.1635-86850= NM_001164547.1:c.1635-86850A>C NM_001164547.1:c.1635-86850A>G NM_001164547.1:c.1635-86850A>T
DISC1 transcript variant j NM_001164547.2:c.1635-86850= NM_001164547.2:c.1635-86850A>C NM_001164547.2:c.1635-86850A>G NM_001164547.2:c.1635-86850A>T
DISC1 transcript variant L NM_018662.2:c.1981+53461= NM_018662.2:c.1981+53461A>C NM_018662.2:c.1981+53461A>G NM_018662.2:c.1981+53461A>T
DISC1 transcript variant L NM_018662.3:c.1981+53461= NM_018662.3:c.1981+53461A>C NM_018662.3:c.1981+53461A>G NM_018662.3:c.1981+53461A>T
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

71 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss13027139 Dec 05, 2003 (119)
2 SC_SNP ss18154538 Feb 27, 2004 (123)
3 SC_SNP ss18256160 Feb 27, 2004 (123)
4 SSAHASNP ss20604266 Apr 05, 2004 (123)
5 ABI ss44069540 Mar 13, 2006 (126)
6 HGSV ss83480873 Dec 15, 2007 (130)
7 BCMHGSC_JDW ss88006631 Mar 23, 2008 (129)
8 1000GENOMES ss109027738 Jan 23, 2009 (130)
9 1000GENOMES ss111927059 Jan 25, 2009 (130)
10 ILLUMINA-UK ss119244190 Feb 15, 2009 (130)
11 ENSEMBL ss139038463 Dec 01, 2009 (131)
12 COMPLETE_GENOMICS ss165388443 Jul 04, 2010 (132)
13 COMPLETE_GENOMICS ss165892382 Jul 04, 2010 (132)
14 COMPLETE_GENOMICS ss167561683 Jul 04, 2010 (132)
15 BUSHMAN ss199740985 Jul 04, 2010 (132)
16 BCM-HGSC-SUB ss205329921 Jul 04, 2010 (132)
17 1000GENOMES ss218938226 Jul 14, 2010 (132)
18 1000GENOMES ss230944255 Jul 14, 2010 (132)
19 1000GENOMES ss238550266 Jul 15, 2010 (132)
20 GMI ss276259271 May 04, 2012 (137)
21 GMI ss284246558 Apr 25, 2013 (138)
22 PJP ss290754926 May 09, 2011 (134)
23 TISHKOFF ss555205780 Apr 25, 2013 (138)
24 SSMP ss648778569 Apr 25, 2013 (138)
25 EVA-GONL ss976255207 Aug 21, 2014 (142)
26 JMKIDD_LAB ss1068685159 Aug 21, 2014 (142)
27 1000GENOMES ss1295068001 Aug 21, 2014 (142)
28 DDI ss1426143375 Apr 01, 2015 (144)
29 EVA_GENOME_DK ss1574748323 Apr 01, 2015 (144)
30 EVA_DECODE ss1585654918 Apr 01, 2015 (144)
31 EVA_UK10K_ALSPAC ss1602362391 Apr 01, 2015 (144)
32 EVA_UK10K_TWINSUK ss1645356424 Apr 01, 2015 (144)
33 HAMMER_LAB ss1795876705 Sep 08, 2015 (146)
34 WEILL_CORNELL_DGM ss1919476444 Feb 12, 2016 (147)
35 GENOMED ss1966998812 Jul 19, 2016 (147)
36 JJLAB ss2020263460 Sep 14, 2016 (149)
37 USC_VALOUEV ss2148299571 Dec 20, 2016 (150)
38 HUMAN_LONGEVITY ss2170948323 Dec 20, 2016 (150)
39 SYSTEMSBIOZJU ss2624643837 Nov 08, 2017 (151)
40 GRF ss2698299911 Nov 08, 2017 (151)
41 GNOMAD ss2767402610 Nov 08, 2017 (151)
42 SWEGEN ss2988622412 Nov 08, 2017 (151)
43 BIOINF_KMB_FNS_UNIBA ss3023892626 Nov 08, 2017 (151)
44 CSHL ss3343960719 Nov 08, 2017 (151)
45 URBANLAB ss3646909394 Oct 11, 2018 (152)
46 EGCUT_WGS ss3656581324 Jul 12, 2019 (153)
47 EVA_DECODE ss3688835381 Jul 12, 2019 (153)
48 ACPOP ss3727953292 Jul 12, 2019 (153)
49 EVA ss3747467986 Jul 12, 2019 (153)
50 KHV_HUMAN_GENOMES ss3800469869 Jul 12, 2019 (153)
51 EVA ss3826698193 Apr 25, 2020 (154)
52 EVA ss3836750812 Apr 25, 2020 (154)
53 EVA ss3842163280 Apr 25, 2020 (154)
54 SGDP_PRJ ss3851115488 Apr 25, 2020 (154)
55 KRGDB ss3896463740 Apr 25, 2020 (154)
56 KOGIC ss3946710558 Apr 25, 2020 (154)
57 TOPMED ss4487240317 Apr 27, 2021 (155)
58 TOMMO_GENOMICS ss5148912509 Apr 27, 2021 (155)
59 1000G_HIGH_COVERAGE ss5246160671 Oct 13, 2022 (156)
60 EVA ss5325457271 Oct 13, 2022 (156)
61 HUGCELL_USP ss5446560284 Oct 13, 2022 (156)
62 EVA ss5506226973 Oct 13, 2022 (156)
63 1000G_HIGH_COVERAGE ss5520441290 Oct 13, 2022 (156)
64 SANFORD_IMAGENETICS ss5627653965 Oct 13, 2022 (156)
65 TOMMO_GENOMICS ss5676812516 Oct 13, 2022 (156)
66 TOMMO_GENOMICS ss5676812517 Oct 13, 2022 (156)
67 YY_MCH ss5801732221 Oct 13, 2022 (156)
68 EVA ss5833409921 Oct 13, 2022 (156)
69 EVA ss5849331990 Oct 13, 2022 (156)
70 EVA ss5912394457 Oct 13, 2022 (156)
71 EVA ss5939502314 Oct 13, 2022 (156)
72 1000Genomes NC_000001.10 - 232007724 Oct 11, 2018 (152)
73 1000Genomes_30x NC_000001.11 - 231871978 Oct 13, 2022 (156)
74 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 232007724 Oct 11, 2018 (152)
75 Genetic variation in the Estonian population NC_000001.10 - 232007724 Oct 11, 2018 (152)
76 The Danish reference pan genome NC_000001.10 - 232007724 Apr 25, 2020 (154)
77 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 42594120 (NC_000001.11:231871977:A:C 69851/140036)
Row 42594121 (NC_000001.11:231871977:A:T 2/140082)

- Apr 27, 2021 (155)
78 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 42594120 (NC_000001.11:231871977:A:C 69851/140036)
Row 42594121 (NC_000001.11:231871977:A:T 2/140082)

- Apr 27, 2021 (155)
79 Genome of the Netherlands Release 5 NC_000001.10 - 232007724 Apr 25, 2020 (154)
80 HapMap NC_000001.11 - 231871978 Apr 25, 2020 (154)
81 KOREAN population from KRGDB NC_000001.10 - 232007724 Apr 25, 2020 (154)
82 Korean Genome Project NC_000001.11 - 231871978 Apr 25, 2020 (154)
83 Northern Sweden NC_000001.10 - 232007724 Jul 12, 2019 (153)
84 Qatari NC_000001.10 - 232007724 Apr 25, 2020 (154)
85 SGDP_PRJ NC_000001.10 - 232007724 Apr 25, 2020 (154)
86 Siberian NC_000001.10 - 232007724 Apr 25, 2020 (154)
87 8.3KJPN NC_000001.10 - 232007724 Apr 27, 2021 (155)
88 14KJPN

Submission ignored due to conflicting rows:
Row 10649620 (NC_000001.11:231871977:A:C 16212/28256)
Row 10649621 (NC_000001.11:231871977:A:T 1/28256)

- Oct 13, 2022 (156)
89 14KJPN

Submission ignored due to conflicting rows:
Row 10649620 (NC_000001.11:231871977:A:C 16212/28256)
Row 10649621 (NC_000001.11:231871977:A:T 1/28256)

- Oct 13, 2022 (156)
90 TopMed NC_000001.11 - 231871978 Apr 27, 2021 (155)
91 UK 10K study - Twins NC_000001.10 - 232007724 Oct 11, 2018 (152)
92 A Vietnamese Genetic Variation Database NC_000001.10 - 232007724 Jul 12, 2019 (153)
93 ALFA NC_000001.11 - 231871978 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs11122352 Sep 24, 2004 (123)
rs59713970 May 25, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss83480873 NC_000001.8:228314458:A:C NC_000001.11:231871977:A:C (self)
ss88006631, ss109027738, ss111927059, ss119244190, ss165388443, ss165892382, ss167561683, ss199740985, ss205329921, ss276259271, ss284246558, ss290754926, ss1585654918 NC_000001.9:230074346:A:C NC_000001.11:231871977:A:C (self)
5937699, 3283512, 2319572, 1928681, 1435328, 3641134, 1238157, 1518374, 3132468, 815925, 6881816, 3283512, 714152, ss218938226, ss230944255, ss238550266, ss555205780, ss648778569, ss976255207, ss1068685159, ss1295068001, ss1426143375, ss1574748323, ss1602362391, ss1645356424, ss1795876705, ss1919476444, ss1966998812, ss2020263460, ss2148299571, ss2624643837, ss2698299911, ss2767402610, ss2988622412, ss3343960719, ss3656581324, ss3727953292, ss3747467986, ss3826698193, ss3836750812, ss3851115488, ss3896463740, ss5148912509, ss5325457271, ss5506226973, ss5627653965, ss5833409921, ss5939502314 NC_000001.10:232007723:A:C NC_000001.11:231871977:A:C (self)
7967225, 289702, 3088559, 50846652, 8254007706, ss2170948323, ss3023892626, ss3646909394, ss3688835381, ss3800469869, ss3842163280, ss3946710558, ss4487240317, ss5246160671, ss5446560284, ss5520441290, ss5676812516, ss5801732221, ss5849331990, ss5912394457 NC_000001.11:231871977:A:C NC_000001.11:231871977:A:C (self)
ss13027139 NT_021973.15:1938712:A:C NC_000001.11:231871977:A:C (self)
ss18154538, ss18256160, ss20604266 NT_021973.16:1938712:A:C NC_000001.11:231871977:A:C (self)
ss44069540, ss139038463 NT_167186.1:25525502:A:C NC_000001.11:231871977:A:C (self)
3641134, ss3896463740 NC_000001.10:232007723:A:G NC_000001.11:231871977:A:G (self)
3641134, ss3896463740 NC_000001.10:232007723:A:T NC_000001.11:231871977:A:T (self)
8254007706, ss5676812517 NC_000001.11:231871977:A:T NC_000001.11:231871977:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs9432025
PMID Title Author Year Journal
19414483 The DISC locus and schizophrenia: evidence from an association study in a central European sample and from a meta-analysis across different European populations. Schumacher J et al. 2009 Human molecular genetics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07