Name: rs6051457
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs6051457

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:2888070 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.075859 (20079/264690, TOPMED)
A=0.061762 (8657/140168, GnomAD)
A=0.06204 (1753/28258, 14KJPN) (+ 18 more)
A=0.05156 (1231/23874, ALFA)
A=0.06271 (1051/16760, 8.3KJPN)
A=0.0951 (609/6404, 1000G_30x)
A=0.0937 (469/5008, 1000G)
A=0.0031 (14/4480, Estonian)
A=0.0039 (15/3854, ALSPAC)
A=0.0032 (12/3708, TWINSUK)
A=0.0862 (252/2922, KOREAN)
A=0.1121 (210/1874, HapMap)
A=0.0862 (158/1832, Korea1K)
A=0.003 (3/998, GoNL)
A=0.206 (129/626, Chileans)
A=0.007 (4/600, NorthernSweden)
A=0.037 (8/216, Qatari)
A=0.056 (12/216, Vietnamese)
G=0.421 (48/114, SGDP_PRJ)
G=0.5 (5/10, Siberian)
A=0.5 (5/10, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: PTPRA : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	23874	G=0.94844	A=0.05156
European	Sub	15640	G=0.99572	A=0.00428
African	Sub	3606	G=0.8500	A=0.1500
African Others	Sub	126	G=0.857	A=0.143
African American	Sub	3480	G=0.8497	A=0.1503
Asian	Sub	160	G=0.938	A=0.062
East Asian	Sub	102	G=0.931	A=0.069
Other Asian	Sub	58	G=0.95	A=0.05
Latin American 1	Sub	288	G=0.934	A=0.066
Latin American 2	Sub	2740	G=0.8343	A=0.1657
South Asian	Sub	110	G=0.936	A=0.064
Other	Sub	1330	G=0.9000	A=0.1000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.924141	A=0.075859
gnomAD - Genomes	Global	Study-wide	140168	G=0.938238	A=0.061762
gnomAD - Genomes	European	Sub	75938	G=0.99454	A=0.00546
gnomAD - Genomes	African	Sub	41982	G=0.85508	A=0.14492
gnomAD - Genomes	American	Sub	13652	G=0.87540	A=0.12460
gnomAD - Genomes	Ashkenazi Jewish	Sub	3316	G=0.9946	A=0.0054
gnomAD - Genomes	East Asian	Sub	3132	G=0.9093	A=0.0907
gnomAD - Genomes	Other	Sub	2148	G=0.9278	A=0.0722
14KJPN	JAPANESE	Study-wide	28258	G=0.93796	A=0.06204
Allele Frequency Aggregator	Total	Global	23874	G=0.94844	A=0.05156
Allele Frequency Aggregator	European	Sub	15640	G=0.99572	A=0.00428
Allele Frequency Aggregator	African	Sub	3606	G=0.8500	A=0.1500
Allele Frequency Aggregator	Latin American 2	Sub	2740	G=0.8343	A=0.1657
Allele Frequency Aggregator	Other	Sub	1330	G=0.9000	A=0.1000
Allele Frequency Aggregator	Latin American 1	Sub	288	G=0.934	A=0.066
Allele Frequency Aggregator	Asian	Sub	160	G=0.938	A=0.062
Allele Frequency Aggregator	South Asian	Sub	110	G=0.936	A=0.064
8.3KJPN	JAPANESE	Study-wide	16760	G=0.93729	A=0.06271
1000Genomes_30x	Global	Study-wide	6404	G=0.9049	A=0.0951
1000Genomes_30x	African	Sub	1786	G=0.8371	A=0.1629
1000Genomes_30x	Europe	Sub	1266	G=0.9961	A=0.0039
1000Genomes_30x	South Asian	Sub	1202	G=0.9576	A=0.0424
1000Genomes_30x	East Asian	Sub	1170	G=0.9308	A=0.0692
1000Genomes_30x	American	Sub	980	G=0.815	A=0.185
1000Genomes	Global	Study-wide	5008	G=0.9063	A=0.0937
1000Genomes	African	Sub	1322	G=0.8359	A=0.1641
1000Genomes	East Asian	Sub	1008	G=0.9286	A=0.0714
1000Genomes	Europe	Sub	1006	G=0.9950	A=0.0050
1000Genomes	South Asian	Sub	978	G=0.955	A=0.045
1000Genomes	American	Sub	694	G=0.811	A=0.189
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.9969	A=0.0031
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.9961	A=0.0039
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.9968	A=0.0032
KOREAN population from KRGDB	KOREAN	Study-wide	2922	G=0.9138	A=0.0862
HapMap	Global	Study-wide	1874	G=0.8879	A=0.1121
HapMap	American	Sub	762	G=0.930	A=0.070
HapMap	African	Sub	690	G=0.803	A=0.197
HapMap	Asian	Sub	254	G=0.921	A=0.079
HapMap	Europe	Sub	168	G=0.994	A=0.006
Korean Genome Project	KOREAN	Study-wide	1832	G=0.9138	A=0.0862
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.997	A=0.003
Chileans	Chilean	Study-wide	626	G=0.794	A=0.206
Northern Sweden	ACPOP	Study-wide	600	G=0.993	A=0.007
Qatari	Global	Study-wide	216	G=0.963	A=0.037
A Vietnamese Genetic Variation Database	Global	Study-wide	216	G=0.944	A=0.056
SGDP_PRJ	Global	Study-wide	114	G=0.421	A=0.579
Siberian	Global	Study-wide	10	G=0.5	A=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.2888070G>A
GRCh37.p13 chr 20	NC_000020.10:g.2868716G>A

Gene: PTPRA, protein tyrosine phosphatase receptor type A (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
PTPRA transcript variant 4	NM_001385302.1:c.-146+143… NM_001385302.1:c.-146+14310G>A	N/A	Intron Variant
PTPRA transcript variant 5	NM_001385303.1:c.-53+1431… NM_001385303.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 6	NM_001385304.1:c.-53+1431… NM_001385304.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 7	NM_001385305.1:c.-129+143… NM_001385305.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 8	NM_001385306.1:c.-222+143… NM_001385306.1:c.-222+14310G>A	N/A	Intron Variant
PTPRA transcript variant 9	NM_001385307.1:c.-50+1431… NM_001385307.1:c.-50+14310G>A	N/A	Intron Variant
PTPRA transcript variant 10	NM_001385308.1:c.-7+14310… NM_001385308.1:c.-7+14310G>A	N/A	Intron Variant
PTPRA transcript variant 11	NM_001385310.1:c.-53+1431… NM_001385310.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 12	NM_001385311.1:c.-7+14310… NM_001385311.1:c.-7+14310G>A	N/A	Intron Variant
PTPRA transcript variant 13	NM_001385312.1:c.-129+143… NM_001385312.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 14	NM_001385313.1:c.-53+1431… NM_001385313.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 15	NM_001385314.1:c.-129+143… NM_001385314.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 16	NM_001385315.1:c.-129+143… NM_001385315.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 17	NM_001385316.1:c.-53+1431… NM_001385316.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 18	NM_001385317.1:c.-129+143… NM_001385317.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 19	NM_001385318.1:c.-53+1431… NM_001385318.1:c.-53+14310G>A	N/A	Intron Variant
PTPRA transcript variant 20	NM_001385319.1:c.-129+143… NM_001385319.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 21	NM_001385320.1:c.-222+143… NM_001385320.1:c.-222+14310G>A	N/A	Intron Variant
PTPRA transcript variant 22	NM_001385321.1:c.-129+143… NM_001385321.1:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 23	NM_001388320.1:c.-219+143… NM_001388320.1:c.-219+14310G>A	N/A	Intron Variant
PTPRA transcript variant 24	NM_001388321.1:c.-129+164… NM_001388321.1:c.-129+1648G>A	N/A	Intron Variant
PTPRA transcript variant 25	NM_001388322.1:c.-1132+14… NM_001388322.1:c.-1132+14310G>A	N/A	Intron Variant
PTPRA transcript variant 26	NM_001388323.1:c.-1175+14… NM_001388323.1:c.-1175+14310G>A	N/A	Intron Variant
PTPRA transcript variant 27	NM_001388324.1:c.-1202+14… NM_001388324.1:c.-1202+14310G>A	N/A	Intron Variant
PTPRA transcript variant 1	NM_002836.4:c.-129+22753G… NM_002836.4:c.-129+22753G>A	N/A	Intron Variant
PTPRA transcript variant 2	NM_080840.3:c.-129+14310G… NM_080840.3:c.-129+14310G>A	N/A	Intron Variant
PTPRA transcript variant 3	NM_080841.3:c.-219+14310G… NM_080841.3:c.-219+14310G>A	N/A	Intron Variant
PTPRA transcript variant 28	NR_170936.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 20	NC_000020.11:g.2888070=	NC_000020.11:g.2888070G>A
GRCh37.p13 chr 20	NC_000020.10:g.2868716=	NC_000020.10:g.2868716G>A
PTPRA transcript variant 4	NM_001385302.1:c.-146+14310=	NM_001385302.1:c.-146+14310G>A
PTPRA transcript variant 5	NM_001385303.1:c.-53+14310=	NM_001385303.1:c.-53+14310G>A
PTPRA transcript variant 6	NM_001385304.1:c.-53+14310=	NM_001385304.1:c.-53+14310G>A
PTPRA transcript variant 7	NM_001385305.1:c.-129+14310=	NM_001385305.1:c.-129+14310G>A
PTPRA transcript variant 8	NM_001385306.1:c.-222+14310=	NM_001385306.1:c.-222+14310G>A
PTPRA transcript variant 9	NM_001385307.1:c.-50+14310=	NM_001385307.1:c.-50+14310G>A
PTPRA transcript variant 10	NM_001385308.1:c.-7+14310=	NM_001385308.1:c.-7+14310G>A
PTPRA transcript variant 11	NM_001385310.1:c.-53+14310=	NM_001385310.1:c.-53+14310G>A
PTPRA transcript variant 12	NM_001385311.1:c.-7+14310=	NM_001385311.1:c.-7+14310G>A
PTPRA transcript variant 13	NM_001385312.1:c.-129+14310=	NM_001385312.1:c.-129+14310G>A
PTPRA transcript variant 14	NM_001385313.1:c.-53+14310=	NM_001385313.1:c.-53+14310G>A
PTPRA transcript variant 15	NM_001385314.1:c.-129+14310=	NM_001385314.1:c.-129+14310G>A
PTPRA transcript variant 16	NM_001385315.1:c.-129+14310=	NM_001385315.1:c.-129+14310G>A
PTPRA transcript variant 17	NM_001385316.1:c.-53+14310=	NM_001385316.1:c.-53+14310G>A
PTPRA transcript variant 18	NM_001385317.1:c.-129+14310=	NM_001385317.1:c.-129+14310G>A
PTPRA transcript variant 19	NM_001385318.1:c.-53+14310=	NM_001385318.1:c.-53+14310G>A
PTPRA transcript variant 20	NM_001385319.1:c.-129+14310=	NM_001385319.1:c.-129+14310G>A
PTPRA transcript variant 21	NM_001385320.1:c.-222+14310=	NM_001385320.1:c.-222+14310G>A
PTPRA transcript variant 22	NM_001385321.1:c.-129+14310=	NM_001385321.1:c.-129+14310G>A
PTPRA transcript variant 23	NM_001388320.1:c.-219+14310=	NM_001388320.1:c.-219+14310G>A
PTPRA transcript variant 24	NM_001388321.1:c.-129+1648=	NM_001388321.1:c.-129+1648G>A
PTPRA transcript variant 25	NM_001388322.1:c.-1132+14310=	NM_001388322.1:c.-1132+14310G>A
PTPRA transcript variant 26	NM_001388323.1:c.-1175+14310=	NM_001388323.1:c.-1175+14310G>A
PTPRA transcript variant 27	NM_001388324.1:c.-1202+14310=	NM_001388324.1:c.-1202+14310G>A
PTPRA transcript variant 1	NM_002836.3:c.-129+22753=	NM_002836.3:c.-129+22753G>A
PTPRA transcript variant 1	NM_002836.4:c.-129+22753=	NM_002836.4:c.-129+22753G>A
PTPRA transcript variant 2	NM_080840.2:c.-129+14310=	NM_080840.2:c.-129+14310G>A
PTPRA transcript variant 2	NM_080840.3:c.-129+14310=	NM_080840.3:c.-129+14310G>A
PTPRA transcript variant 3	NM_080841.3:c.-219+14310=	NM_080841.3:c.-219+14310G>A
PTPRA transcript variant X1	XM_005260776.1:c.-53+14310=	XM_005260776.1:c.-53+14310G>A
PTPRA transcript variant X2	XM_005260777.1:c.-53+14310=	XM_005260777.1:c.-53+14310G>A
PTPRA transcript variant X3	XM_005260778.1:c.-129+14310=	XM_005260778.1:c.-129+14310G>A
PTPRA transcript variant X5	XM_005260780.1:c.-222+14310=	XM_005260780.1:c.-222+14310G>A
PTPRA transcript variant X6	XM_005260781.1:c.-53+14310=	XM_005260781.1:c.-53+14310G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

47 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_SNP	ss8363856	Apr 21, 2003 (114)
2	AFFY	ss76707419	Dec 06, 2007 (129)
3	KRIBB_YJKIM	ss104919047	Feb 06, 2009 (130)
4	1000GENOMES	ss228223753	Jul 14, 2010 (132)
5	1000GENOMES	ss243930783	Jul 15, 2010 (132)
6	GMI	ss283277716	May 04, 2012 (137)
7	PJP	ss292565308	May 09, 2011 (134)
8	TISHKOFF	ss566098217	Apr 25, 2013 (138)
9	SSMP	ss661967854	Apr 25, 2013 (138)
10	EVA-GONL	ss994480058	Aug 21, 2014 (142)
11	JMKIDD_LAB	ss1082026987	Aug 21, 2014 (142)
12	1000GENOMES	ss1363848990	Aug 21, 2014 (142)
13	EVA_UK10K_ALSPAC	ss1638295219	Apr 01, 2015 (144)
14	EVA_UK10K_TWINSUK	ss1681289252	Apr 01, 2015 (144)
15	EVA_DECODE	ss1698534297	Apr 01, 2015 (144)
16	EVA_SVP	ss1713674538	Apr 01, 2015 (144)
17	HAMMER_LAB	ss1809395232	Sep 08, 2015 (146)
18	WEILL_CORNELL_DGM	ss1937989053	Feb 12, 2016 (147)
19	GENOMED	ss1969076690	Jul 19, 2016 (147)
20	JJLAB	ss2029771221	Sep 14, 2016 (149)
21	USC_VALOUEV	ss2158325103	Dec 20, 2016 (150)
22	HUMAN_LONGEVITY	ss2240881340	Dec 20, 2016 (150)
23	SYSTEMSBIOZJU	ss2629383227	Nov 08, 2017 (151)
24	GRF	ss2703996693	Nov 08, 2017 (151)
25	GNOMAD	ss2964830047	Nov 08, 2017 (151)
26	SWEGEN	ss3017778484	Nov 08, 2017 (151)
27	EGCUT_WGS	ss3684492170	Jul 13, 2019 (153)
28	EVA_DECODE	ss3706448699	Jul 13, 2019 (153)
29	ACPOP	ss3743198947	Jul 13, 2019 (153)
30	EVA	ss3758353909	Jul 13, 2019 (153)
31	KHV_HUMAN_GENOMES	ss3821525683	Jul 13, 2019 (153)
32	SGDP_PRJ	ss3888616384	Apr 27, 2020 (154)
33	KRGDB	ss3938795538	Apr 27, 2020 (154)
34	KOGIC	ss3981720560	Apr 27, 2020 (154)
35	TOPMED	ss5080424298	Apr 27, 2021 (155)
36	TOMMO_GENOMICS	ss5228598153	Apr 27, 2021 (155)
37	1000G_HIGH_COVERAGE	ss5307894135	Oct 16, 2022 (156)
38	EVA	ss5435913364	Oct 16, 2022 (156)
39	HUGCELL_USP	ss5500313632	Oct 16, 2022 (156)
40	EVA	ss5512139417	Oct 16, 2022 (156)
41	1000G_HIGH_COVERAGE	ss5613883654	Oct 16, 2022 (156)
42	SANFORD_IMAGENETICS	ss5662754131	Oct 16, 2022 (156)
43	TOMMO_GENOMICS	ss5787516901	Oct 16, 2022 (156)
44	YY_MCH	ss5817767488	Oct 16, 2022 (156)
45	EVA	ss5845367283	Oct 16, 2022 (156)
46	EVA	ss5922456199	Oct 16, 2022 (156)
47	EVA	ss5957652122	Oct 16, 2022 (156)
48	1000Genomes	NC_000020.10 - 2868716	Oct 12, 2018 (152)
49	1000Genomes_30x	NC_000020.11 - 2888070	Oct 16, 2022 (156)
50	The Avon Longitudinal Study of Parents and Children	NC_000020.10 - 2868716	Oct 12, 2018 (152)
51	Chileans	NC_000020.10 - 2868716	Apr 27, 2020 (154)
52	Genetic variation in the Estonian population	NC_000020.10 - 2868716	Oct 12, 2018 (152)
53	gnomAD - Genomes	NC_000020.11 - 2888070	Apr 27, 2021 (155)
54	Genome of the Netherlands Release 5	NC_000020.10 - 2868716	Apr 27, 2020 (154)
55	HapMap	NC_000020.11 - 2888070	Apr 27, 2020 (154)
56	KOREAN population from KRGDB	NC_000020.10 - 2868716	Apr 27, 2020 (154)
57	Korean Genome Project	NC_000020.11 - 2888070	Apr 27, 2020 (154)
58	Northern Sweden	NC_000020.10 - 2868716	Jul 13, 2019 (153)
59	Qatari	NC_000020.10 - 2868716	Apr 27, 2020 (154)
60	SGDP_PRJ	NC_000020.10 - 2868716	Apr 27, 2020 (154)
61	Siberian	NC_000020.10 - 2868716	Apr 27, 2020 (154)
62	8.3KJPN	NC_000020.10 - 2868716	Apr 27, 2021 (155)
63	14KJPN	NC_000020.11 - 2888070	Oct 16, 2022 (156)
64	TopMed	NC_000020.11 - 2888070	Apr 27, 2021 (155)
65	UK 10K study - Twins	NC_000020.10 - 2868716	Oct 12, 2018 (152)
66	A Vietnamese Genetic Variation Database	NC_000020.10 - 2868716	Jul 13, 2019 (153)
67	ALFA	NC_000020.11 - 2888070	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss76707419, ss283277716, ss292565308, ss1698534297, ss1713674538	NC_000020.9:2816715:G:A	NC_000020.11:2888069:G:A	(self)
77280783, 42776161, 248252, 30230418, 19059939, 45972932, 16483812, 20030975, 40633364, 10841457, 86567460, 42776161, 9443136, ss228223753, ss243930783, ss566098217, ss661967854, ss994480058, ss1082026987, ss1363848990, ss1638295219, ss1681289252, ss1809395232, ss1937989053, ss1969076690, ss2029771221, ss2158325103, ss2629383227, ss2703996693, ss2964830047, ss3017778484, ss3684492170, ss3743198947, ss3758353909, ss3888616384, ss3938795538, ss5228598153, ss5435913364, ss5512139417, ss5662754131, ss5845367283, ss5957652122	NC_000020.10:2868715:G:A	NC_000020.11:2888069:G:A	(self)
101409589, 544954071, 2053825, 38098561, 121354005, 355533243, 17010037285, ss2240881340, ss3706448699, ss3821525683, ss3981720560, ss5080424298, ss5307894135, ss5500313632, ss5613883654, ss5787516901, ss5817767488, ss5922456199	NC_000020.11:2888069:G:A	NC_000020.11:2888069:G:A	(self)
ss8363856, ss104919047	NT_011387.8:2808715:G:A	NC_000020.11:2888069:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs6051457

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs6051457