Name: rs4839670
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs4839670

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:143828340 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.241758 (63991/264690, TOPMED)
T=0.067504 (13110/194210, ALFA)
T=0.228864 (32041/140000, GnomAD) (+ 19 more)
T=0.12966 (3664/28258, 14KJPN)
T=0.12858 (2155/16760, 8.3KJPN)
T=0.2562 (1641/6404, 1000G_30x)
T=0.2448 (1226/5008, 1000G)
T=0.0326 (146/4480, Estonian)
T=0.0428 (165/3854, ALSPAC)
T=0.0415 (154/3708, TWINSUK)
T=0.0959 (281/2930, KOREAN)
T=0.1368 (285/2084, HGDP_Stanford)
T=0.3140 (594/1892, HapMap)
T=0.0928 (170/1832, Korea1K)
T=0.049 (49/998, GoNL)
T=0.038 (23/600, NorthernSweden)
T=0.067 (35/520, SGDP_PRJ)
T=0.176 (38/216, Qatari)
T=0.140 (30/214, Vietnamese)
T=0.04 (2/56, Siberian)
T=0.07 (4/54, Ancient Sardinia)
T=0.07 (3/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC9A9 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	194210	T=0.067504	C=0.932496
European	Sub	167386	T=0.042668	C=0.957332
African	Sub	6878	T=0.6473	C=0.3527
African Others	Sub	260	T=0.785	C=0.215
African American	Sub	6618	T=0.6419	C=0.3581
Asian	Sub	694	T=0.112	C=0.888
East Asian	Sub	548	T=0.117	C=0.883
Other Asian	Sub	146	T=0.096	C=0.904
Latin American 1	Sub	830	T=0.189	C=0.811
Latin American 2	Sub	6856	T=0.0573	C=0.9427
South Asian	Sub	5038	T=0.0405	C=0.9595
Other	Sub	6528	T=0.1048	C=0.8952

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.241758	C=0.758242
Allele Frequency Aggregator	Total	Global	194210	T=0.067504	C=0.932496
Allele Frequency Aggregator	European	Sub	167386	T=0.042668	C=0.957332
Allele Frequency Aggregator	African	Sub	6878	T=0.6473	C=0.3527
Allele Frequency Aggregator	Latin American 2	Sub	6856	T=0.0573	C=0.9427
Allele Frequency Aggregator	Other	Sub	6528	T=0.1048	C=0.8952
Allele Frequency Aggregator	South Asian	Sub	5038	T=0.0405	C=0.9595
Allele Frequency Aggregator	Latin American 1	Sub	830	T=0.189	C=0.811
Allele Frequency Aggregator	Asian	Sub	694	T=0.112	C=0.888
gnomAD - Genomes	Global	Study-wide	140000	T=0.228864	C=0.771136
gnomAD - Genomes	European	Sub	75914	T=0.03549	C=0.96451
gnomAD - Genomes	African	Sub	41854	T=0.64689	C=0.35311
gnomAD - Genomes	American	Sub	13628	T=0.09664	C=0.90336
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.0750	C=0.9250
gnomAD - Genomes	East Asian	Sub	3128	T=0.0988	C=0.9012
gnomAD - Genomes	Other	Sub	2154	T=0.1843	C=0.8157
14KJPN	JAPANESE	Study-wide	28258	T=0.12966	C=0.87034
8.3KJPN	JAPANESE	Study-wide	16760	T=0.12858	C=0.87142
1000Genomes_30x	Global	Study-wide	6404	T=0.2562	C=0.7438
1000Genomes_30x	African	Sub	1786	T=0.7396	C=0.2604
1000Genomes_30x	Europe	Sub	1266	T=0.0371	C=0.9629
1000Genomes_30x	South Asian	Sub	1202	T=0.0383	C=0.9617
1000Genomes_30x	East Asian	Sub	1170	T=0.1137	C=0.8863
1000Genomes_30x	American	Sub	980	T=0.096	C=0.904
1000Genomes	Global	Study-wide	5008	T=0.2448	C=0.7552
1000Genomes	African	Sub	1322	T=0.7322	C=0.2678
1000Genomes	East Asian	Sub	1008	T=0.1171	C=0.8829
1000Genomes	Europe	Sub	1006	T=0.0348	C=0.9652
1000Genomes	South Asian	Sub	978	T=0.039	C=0.961
1000Genomes	American	Sub	694	T=0.097	C=0.903
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.0326	C=0.9674
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.0428	C=0.9572
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.0415	C=0.9585
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.0959	A=0.0000, C=0.9041, G=0.0000
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	T=0.1368	C=0.8632
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	T=0.104	C=0.896
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	T=0.039	C=0.961
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	T=0.097	C=0.903
HGDP-CEPH-db Supplement 1	Europe	Sub	320	T=0.050	C=0.950
HGDP-CEPH-db Supplement 1	Africa	Sub	242	T=0.682	C=0.318
HGDP-CEPH-db Supplement 1	America	Sub	216	T=0.005	C=0.995
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.06	C=0.94
HapMap	Global	Study-wide	1892	T=0.3140	C=0.6860
HapMap	American	Sub	770	T=0.134	C=0.866
HapMap	African	Sub	692	T=0.653	C=0.347
HapMap	Asian	Sub	254	T=0.126	C=0.874
HapMap	Europe	Sub	176	T=0.040	C=0.960
Korean Genome Project	KOREAN	Study-wide	1832	T=0.0928	C=0.9072
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.049	C=0.951
Northern Sweden	ACPOP	Study-wide	600	T=0.038	C=0.962
SGDP_PRJ	Global	Study-wide	520	T=0.067	C=0.933
Qatari	Global	Study-wide	216	T=0.176	C=0.824
A Vietnamese Genetic Variation Database	Global	Study-wide	214	T=0.140	C=0.860
Siberian	Global	Study-wide	56	T=0.04	C=0.96
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	54	T=0.07	C=0.93
The Danish reference pan genome	Danish	Study-wide	40	T=0.07	C=0.93

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.143828340T>A
GRCh38.p14 chr 3	NC_000003.12:g.143828340T>C
GRCh38.p14 chr 3	NC_000003.12:g.143828340T>G
GRCh37.p13 chr 3	NC_000003.11:g.143547182T>A
GRCh37.p13 chr 3	NC_000003.11:g.143547182T>C
GRCh37.p13 chr 3	NC_000003.11:g.143547182T>G
SLC9A9 RefSeqGene	NG_017077.2:g.25192A>T
SLC9A9 RefSeqGene	NG_017077.2:g.25192A>G
SLC9A9 RefSeqGene	NG_017077.2:g.25192A>C

Gene: SLC9A9, solute carrier family 9 member A9 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC9A9 transcript	NM_173653.4:c.378+3679A>T	N/A	Intron Variant
SLC9A9 transcript variant X4	XM_011512704.4:c.378+3679… XM_011512704.4:c.378+3679A>T	N/A	Intron Variant
SLC9A9 transcript variant X1	XM_017006202.3:c.378+3679… XM_017006202.3:c.378+3679A>T	N/A	Intron Variant
SLC9A9 transcript variant X2	XM_017006203.2:c.27+19808… XM_017006203.2:c.27+19808A>T	N/A	Intron Variant
SLC9A9 transcript variant X3	XM_011512703.4:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C	G
GRCh38.p14 chr 3	NC_000003.12:g.143828340=	NC_000003.12:g.143828340T>A	NC_000003.12:g.143828340T>C	NC_000003.12:g.143828340T>G
GRCh37.p13 chr 3	NC_000003.11:g.143547182=	NC_000003.11:g.143547182T>A	NC_000003.11:g.143547182T>C	NC_000003.11:g.143547182T>G
SLC9A9 RefSeqGene	NG_017077.2:g.25192=	NG_017077.2:g.25192A>T	NG_017077.2:g.25192A>G	NG_017077.2:g.25192A>C
SLC9A9 transcript	NM_173653.3:c.378+3679=	NM_173653.3:c.378+3679A>T	NM_173653.3:c.378+3679A>G	NM_173653.3:c.378+3679A>C
SLC9A9 transcript	NM_173653.4:c.378+3679=	NM_173653.4:c.378+3679A>T	NM_173653.4:c.378+3679A>G	NM_173653.4:c.378+3679A>C
SLC9A9 transcript variant X4	XM_011512704.4:c.378+3679=	XM_011512704.4:c.378+3679A>T	XM_011512704.4:c.378+3679A>G	XM_011512704.4:c.378+3679A>C
SLC9A9 transcript variant X1	XM_017006202.3:c.378+3679=	XM_017006202.3:c.378+3679A>T	XM_017006202.3:c.378+3679A>G	XM_017006202.3:c.378+3679A>C
SLC9A9 transcript variant X2	XM_017006203.2:c.27+19808=	XM_017006203.2:c.27+19808A>T	XM_017006203.2:c.27+19808A>G	XM_017006203.2:c.27+19808A>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

124 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss6684688	Feb 20, 2003 (111)
2	BCM_SSAHASNP	ss10042662	Jul 11, 2003 (116)
3	BCM_SSAHASNP	ss14216158	Dec 05, 2003 (119)
4	CSHL-HAPMAP	ss19536302	Feb 27, 2004 (120)
5	SSAHASNP	ss21914002	Apr 05, 2004 (121)
6	ABI	ss41994109	Mar 13, 2006 (126)
7	ILLUMINA	ss67385716	Dec 02, 2006 (127)
8	ILLUMINA	ss67761761	Dec 02, 2006 (127)
9	ILLUMINA	ss68238154	Dec 12, 2006 (127)
10	ILLUMINA	ss70829515	May 25, 2008 (130)
11	ILLUMINA	ss71412008	May 18, 2007 (127)
12	ILLUMINA	ss75624585	Dec 06, 2007 (129)
13	HGSV	ss77532473	Dec 06, 2007 (129)
14	HGSV	ss78389800	Dec 06, 2007 (129)
15	KRIBB_YJKIM	ss84372001	Dec 15, 2007 (130)
16	BCMHGSC_JDW	ss92309031	Mar 24, 2008 (129)
17	HUMANGENOME_JCVI	ss99138442	Feb 05, 2009 (130)
18	BGI	ss106303135	Feb 05, 2009 (130)
19	1000GENOMES	ss112535293	Jan 25, 2009 (130)
20	ENSEMBL	ss139201110	Dec 01, 2009 (131)
21	ENSEMBL	ss143252521	Dec 01, 2009 (131)
22	ILLUMINA	ss154322078	Dec 01, 2009 (131)
23	GMI	ss156289952	Dec 01, 2009 (131)
24	ILLUMINA	ss159498682	Dec 01, 2009 (131)
25	ILLUMINA	ss160718290	Dec 01, 2009 (131)
26	COMPLETE_GENOMICS	ss162681999	Jul 04, 2010 (132)
27	COMPLETE_GENOMICS	ss167278829	Jul 04, 2010 (132)
28	ILLUMINA	ss173839144	Jul 04, 2010 (132)
29	BUSHMAN	ss203289359	Jul 04, 2010 (132)
30	BCM-HGSC-SUB	ss205991614	Jul 04, 2010 (132)
31	1000GENOMES	ss211281155	Jul 14, 2010 (132)
32	1000GENOMES	ss220472395	Jul 14, 2010 (132)
33	1000GENOMES	ss232064890	Jul 14, 2010 (132)
34	1000GENOMES	ss239429814	Jul 15, 2010 (132)
35	GMI	ss277382526	May 04, 2012 (137)
36	GMI	ss284763820	Apr 25, 2013 (138)
37	PJP	ss292938043	May 09, 2011 (134)
38	ILLUMINA	ss481069128	May 04, 2012 (137)
39	ILLUMINA	ss481091036	May 04, 2012 (137)
40	ILLUMINA	ss482084843	Sep 08, 2015 (146)
41	ILLUMINA	ss485329693	May 04, 2012 (137)
42	ILLUMINA	ss537282266	Sep 08, 2015 (146)
43	TISHKOFF	ss556997786	Apr 25, 2013 (138)
44	SSMP	ss650726014	Apr 25, 2013 (138)
45	ILLUMINA	ss778549490	Sep 08, 2015 (146)
46	ILLUMINA	ss783110625	Sep 08, 2015 (146)
47	ILLUMINA	ss784067624	Sep 08, 2015 (146)
48	ILLUMINA	ss832369295	Sep 08, 2015 (146)
49	ILLUMINA	ss833010048	Jul 13, 2019 (153)
50	ILLUMINA	ss834006203	Sep 08, 2015 (146)
51	EVA-GONL	ss979250290	Aug 21, 2014 (142)
52	JMKIDD_LAB	ss1070896901	Aug 21, 2014 (142)
53	1000GENOMES	ss1306508648	Aug 21, 2014 (142)
54	DDI	ss1429613564	Apr 01, 2015 (144)
55	EVA_GENOME_DK	ss1580215987	Apr 01, 2015 (144)
56	EVA_DECODE	ss1588739350	Apr 01, 2015 (144)
57	EVA_UK10K_ALSPAC	ss1608398475	Apr 01, 2015 (144)
58	EVA_UK10K_TWINSUK	ss1651392508	Apr 01, 2015 (144)
59	EVA_SVP	ss1712618883	Apr 01, 2015 (144)
60	ILLUMINA	ss1752444305	Sep 08, 2015 (146)
61	HAMMER_LAB	ss1800153205	Sep 08, 2015 (146)
62	WEILL_CORNELL_DGM	ss1922473754	Feb 12, 2016 (147)
63	GENOMED	ss1969542123	Jul 19, 2016 (147)
64	JJLAB	ss2021807065	Sep 14, 2016 (149)
65	USC_VALOUEV	ss2149903532	Dec 20, 2016 (150)
66	HUMAN_LONGEVITY	ss2256550724	Dec 20, 2016 (150)
67	SYSTEMSBIOZJU	ss2625405410	Nov 08, 2017 (151)
68	ILLUMINA	ss2634022691	Nov 08, 2017 (151)
69	GRF	ss2705316502	Nov 08, 2017 (151)
70	GNOMAD	ss2800131577	Nov 08, 2017 (151)
71	SWEGEN	ss2993336761	Nov 08, 2017 (151)
72	BIOINF_KMB_FNS_UNIBA	ss3024671105	Nov 08, 2017 (151)
73	CSHL	ss3345305772	Nov 08, 2017 (151)
74	ILLUMINA	ss3628796026	Oct 12, 2018 (152)
75	ILLUMINA	ss3631964863	Oct 12, 2018 (152)
76	ILLUMINA	ss3633311608	Oct 12, 2018 (152)
77	ILLUMINA	ss3634029452	Oct 12, 2018 (152)
78	ILLUMINA	ss3634921359	Oct 12, 2018 (152)
79	ILLUMINA	ss3635712963	Oct 12, 2018 (152)
80	ILLUMINA	ss3636618560	Oct 12, 2018 (152)
81	ILLUMINA	ss3637465391	Oct 12, 2018 (152)
82	ILLUMINA	ss3638446989	Oct 12, 2018 (152)
83	ILLUMINA	ss3639226196	Oct 12, 2018 (152)
84	ILLUMINA	ss3639913310	Oct 12, 2018 (152)
85	ILLUMINA	ss3640628657	Oct 12, 2018 (152)
86	ILLUMINA	ss3641152729	Oct 12, 2018 (152)
87	ILLUMINA	ss3641449430	Oct 12, 2018 (152)
88	ILLUMINA	ss3643401527	Oct 12, 2018 (152)
89	ILLUMINA	ss3643959952	Oct 12, 2018 (152)
90	URBANLAB	ss3647545137	Oct 12, 2018 (152)
91	EGCUT_WGS	ss3661261872	Jul 13, 2019 (153)
92	EVA_DECODE	ss3710457965	Jul 13, 2019 (153)
93	ACPOP	ss3730424357	Jul 13, 2019 (153)
94	ILLUMINA	ss3745221339	Jul 13, 2019 (153)
95	EVA	ss3760800799	Jul 13, 2019 (153)
96	ILLUMINA	ss3772716529	Jul 13, 2019 (153)
97	PACBIO	ss3784486879	Jul 13, 2019 (153)
98	PACBIO	ss3789976775	Jul 13, 2019 (153)
99	PACBIO	ss3794851349	Jul 13, 2019 (153)
100	KHV_HUMAN_GENOMES	ss3803932631	Jul 13, 2019 (153)
101	EVA	ss3828117403	Apr 25, 2020 (154)
102	EVA	ss3837491596	Apr 25, 2020 (154)
103	EVA	ss3842922743	Apr 25, 2020 (154)
104	HGDP	ss3847726601	Apr 25, 2020 (154)
105	SGDP_PRJ	ss3857152255	Apr 25, 2020 (154)
106	KRGDB	ss3903188530	Apr 25, 2020 (154)
107	KOGIC	ss3952585682	Apr 25, 2020 (154)
108	EVA	ss3985026756	Apr 26, 2021 (155)
109	EVA	ss4017110481	Apr 26, 2021 (155)
110	TOPMED	ss4586679038	Apr 26, 2021 (155)
111	TOMMO_GENOMICS	ss5161980776	Apr 26, 2021 (155)
112	1000G_HIGH_COVERAGE	ss5256331174	Oct 12, 2022 (156)
113	EVA	ss5314899715	Oct 12, 2022 (156)
114	EVA	ss5343831260	Oct 12, 2022 (156)
115	HUGCELL_USP	ss5455438720	Oct 12, 2022 (156)
116	1000G_HIGH_COVERAGE	ss5535927737	Oct 12, 2022 (156)
117	SANFORD_IMAGENETICS	ss5633360931	Oct 12, 2022 (156)
118	TOMMO_GENOMICS	ss5694975662	Oct 12, 2022 (156)
119	EVA	ss5799594881	Oct 12, 2022 (156)
120	YY_MCH	ss5804321616	Oct 12, 2022 (156)
121	EVA	ss5826596218	Oct 12, 2022 (156)
122	EVA	ss5853873819	Oct 12, 2022 (156)
123	EVA	ss5871353942	Oct 12, 2022 (156)
124	EVA	ss5961719150	Oct 12, 2022 (156)
125	1000Genomes	NC_000003.11 - 143547182	Oct 12, 2018 (152)
126	1000Genomes_30x	NC_000003.12 - 143828340	Oct 12, 2022 (156)
127	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 143547182	Oct 12, 2018 (152)
128	Genetic variation in the Estonian population	NC_000003.11 - 143547182	Oct 12, 2018 (152)
129	The Danish reference pan genome	NC_000003.11 - 143547182	Apr 25, 2020 (154)
130	gnomAD - Genomes	NC_000003.12 - 143828340	Apr 26, 2021 (155)
131	Genome of the Netherlands Release 5	NC_000003.11 - 143547182	Apr 25, 2020 (154)
132	HGDP-CEPH-db Supplement 1	NC_000003.10 - 145029872	Apr 25, 2020 (154)
133	HapMap	NC_000003.12 - 143828340	Apr 25, 2020 (154)
134	KOREAN population from KRGDB	NC_000003.11 - 143547182	Apr 25, 2020 (154)
135	Korean Genome Project	NC_000003.12 - 143828340	Apr 25, 2020 (154)
136	Northern Sweden	NC_000003.11 - 143547182	Jul 13, 2019 (153)
137	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000003.11 - 143547182	Apr 26, 2021 (155)
138	Qatari	NC_000003.11 - 143547182	Apr 25, 2020 (154)
139	SGDP_PRJ	NC_000003.11 - 143547182	Apr 25, 2020 (154)
140	Siberian	NC_000003.11 - 143547182	Apr 25, 2020 (154)
141	8.3KJPN	NC_000003.11 - 143547182	Apr 26, 2021 (155)
142	14KJPN	NC_000003.12 - 143828340	Oct 12, 2022 (156)
143	TopMed	NC_000003.12 - 143828340	Apr 26, 2021 (155)
144	UK 10K study - Twins	NC_000003.11 - 143547182	Oct 12, 2018 (152)
145	A Vietnamese Genetic Variation Database	NC_000003.11 - 143547182	Jul 13, 2019 (153)
146	ALFA	NC_000003.12 - 143828340	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59382552	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
10365924, ss3903188530	NC_000003.11:143547181:T:A	NC_000003.12:143828339:T:A	(self)
ss77532473, ss78389800, ss3639226196, ss3639913310, ss3643959952	NC_000003.9:145029879:T:C	NC_000003.12:143828339:T:C	(self)
404493, ss92309031, ss112535293, ss162681999, ss167278829, ss203289359, ss205991614, ss211281155, ss277382526, ss284763820, ss292938043, ss481069128, ss1588739350, ss1712618883, ss3643401527, ss3847726601	NC_000003.10:145029871:T:C	NC_000003.12:143828339:T:C	(self)
17783950, 9904773, 7000120, 6380926, 4349739, 10365924, 3709222, 252683, 4515684, 9169235, 2419886, 19950083, 9904773, 2159170, ss220472395, ss232064890, ss239429814, ss481091036, ss482084843, ss485329693, ss537282266, ss556997786, ss650726014, ss778549490, ss783110625, ss784067624, ss832369295, ss833010048, ss834006203, ss979250290, ss1070896901, ss1306508648, ss1429613564, ss1580215987, ss1608398475, ss1651392508, ss1752444305, ss1800153205, ss1922473754, ss1969542123, ss2021807065, ss2149903532, ss2625405410, ss2634022691, ss2705316502, ss2800131577, ss2993336761, ss3345305772, ss3628796026, ss3631964863, ss3633311608, ss3634029452, ss3634921359, ss3635712963, ss3636618560, ss3637465391, ss3638446989, ss3640628657, ss3641152729, ss3641449430, ss3661261872, ss3730424357, ss3745221339, ss3760800799, ss3772716529, ss3784486879, ss3789976775, ss3794851349, ss3828117403, ss3837491596, ss3857152255, ss3903188530, ss3985026756, ss4017110481, ss5161980776, ss5314899715, ss5343831260, ss5633360931, ss5799594881, ss5826596218, ss5961719150	NC_000003.11:143547181:T:C	NC_000003.12:143828339:T:C	(self)
23453672, 126355275, 2474166, 8963683, 28812766, 424056593, 13040345804, ss2256550724, ss3024671105, ss3647545137, ss3710457965, ss3803932631, ss3842922743, ss3952585682, ss4586679038, ss5256331174, ss5455438720, ss5535927737, ss5694975662, ss5804321616, ss5853873819, ss5871353942	NC_000003.12:143828339:T:C	NC_000003.12:143828339:T:C	(self)
ss10042662	NT_005612.13:49946717:T:C	NC_000003.12:143828339:T:C	(self)
ss14216158, ss19536302, ss21914002	NT_005612.14:50042335:T:C	NC_000003.12:143828339:T:C	(self)
ss6684688, ss41994109, ss67385716, ss67761761, ss68238154, ss70829515, ss71412008, ss75624585, ss84372001, ss99138442, ss106303135, ss139201110, ss143252521, ss154322078, ss156289952, ss159498682, ss160718290, ss173839144	NT_005612.16:50042327:T:C	NC_000003.12:143828339:T:C	(self)
10365924, ss3903188530	NC_000003.11:143547181:T:G	NC_000003.12:143828339:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs4839670

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs4839670