Name: rs3897990
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3897990

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr10:8746307 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.284797 (75383/264690, TOPMED)
A=0.261340 (64943/248500, ALFA)
A=0.257339 (36013/139944, GnomAD) (+ 20 more)
A=0.35084 (27609/78694, PAGE_STUDY)
G=0.31750 (8972/28258, 14KJPN)
G=0.31677 (5309/16760, 8.3KJPN)
A=0.3891 (2492/6404, 1000G_30x)
A=0.4006 (2006/5008, 1000G)
A=0.1799 (806/4480, Estonian)
A=0.2602 (1003/3854, ALSPAC)
A=0.2422 (898/3708, TWINSUK)
G=0.2816 (825/2930, KOREAN)
A=0.4357 (908/2084, HGDP_Stanford)
A=0.3912 (737/1884, HapMap)
G=0.2795 (512/1832, Korea1K)
A=0.195 (195/998, GoNL)
G=0.245 (192/784, PRJEB37584)
A=0.170 (102/600, NorthernSweden)
G=0.326 (122/374, SGDP_PRJ)
A=0.370 (80/216, Qatari)
A=0.21 (18/86, Ancient Sardinia)
A=0.25 (10/40, GENOME_DK)
G=0.38 (12/32, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: None
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	253536	G=0.738743	A=0.261257
European	Sub	223130	G=0.752283	A=0.247717
African	Sub	9102	G=0.7829	A=0.2171
African Others	Sub	350	G=0.751	A=0.249
African American	Sub	8752	G=0.7842	A=0.2158
Asian	Sub	3862	G=0.2794	A=0.7206
East Asian	Sub	3134	G=0.2703	A=0.7297
Other Asian	Sub	728	G=0.319	A=0.681
Latin American 1	Sub	1040	G=0.7038	A=0.2962
Latin American 2	Sub	6638	G=0.5889	A=0.4111
South Asian	Sub	364	G=0.571	A=0.429
Other	Sub	9400	G=0.6795	A=0.3205

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.715203	A=0.284797
Allele Frequency Aggregator	Total	Global	248500	G=0.738660	A=0.261340
Allele Frequency Aggregator	European	Sub	220036	G=0.752245	A=0.247755
Allele Frequency Aggregator	Other	Sub	8600	G=0.6821	A=0.3179
Allele Frequency Aggregator	African	Sub	7960	G=0.7842	A=0.2158
Allele Frequency Aggregator	Latin American 2	Sub	6638	G=0.5889	A=0.4111
Allele Frequency Aggregator	Asian	Sub	3862	G=0.2794	A=0.7206
Allele Frequency Aggregator	Latin American 1	Sub	1040	G=0.7038	A=0.2962
Allele Frequency Aggregator	South Asian	Sub	364	G=0.571	A=0.429
gnomAD - Genomes	Global	Study-wide	139944	G=0.742661	A=0.257339
gnomAD - Genomes	European	Sub	75836	G=0.76826	A=0.23174
gnomAD - Genomes	African	Sub	41918	G=0.77167	A=0.22833
gnomAD - Genomes	American	Sub	13596	G=0.64401	A=0.35599
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	G=0.6972	A=0.3028
gnomAD - Genomes	East Asian	Sub	3126	G=0.2393	A=0.7607
gnomAD - Genomes	Other	Sub	2146	G=0.6999	A=0.3001
The PAGE Study	Global	Study-wide	78694	G=0.64916	A=0.35084
The PAGE Study	AfricanAmerican	Sub	32516	G=0.76934	A=0.23066
The PAGE Study	Mexican	Sub	10806	G=0.59893	A=0.40107
The PAGE Study	Asian	Sub	8318	G=0.3034	A=0.6966
The PAGE Study	PuertoRican	Sub	7918	G=0.7152	A=0.2848
The PAGE Study	NativeHawaiian	Sub	4534	G=0.3648	A=0.6352
The PAGE Study	Cuban	Sub	4228	G=0.6994	A=0.3006
The PAGE Study	Dominican	Sub	3826	G=0.7491	A=0.2509
The PAGE Study	CentralAmerican	Sub	2450	G=0.5906	A=0.4094
The PAGE Study	SouthAmerican	Sub	1982	G=0.5661	A=0.4339
The PAGE Study	NativeAmerican	Sub	1260	G=0.6960	A=0.3040
The PAGE Study	SouthAsian	Sub	856	G=0.569	A=0.431
14KJPN	JAPANESE	Study-wide	28258	G=0.31750	A=0.68250
8.3KJPN	JAPANESE	Study-wide	16760	G=0.31677	A=0.68323
1000Genomes_30x	Global	Study-wide	6404	G=0.6109	A=0.3891
1000Genomes_30x	African	Sub	1786	G=0.7844	A=0.2156
1000Genomes_30x	Europe	Sub	1266	G=0.7575	A=0.2425
1000Genomes_30x	South Asian	Sub	1202	G=0.5358	A=0.4642
1000Genomes_30x	East Asian	Sub	1170	G=0.2735	A=0.7265
1000Genomes_30x	American	Sub	980	G=0.600	A=0.400
1000Genomes	Global	Study-wide	5008	G=0.5994	A=0.4006
1000Genomes	African	Sub	1322	G=0.7784	A=0.2216
1000Genomes	East Asian	Sub	1008	G=0.2679	A=0.7321
1000Genomes	Europe	Sub	1006	G=0.7505	A=0.2495
1000Genomes	South Asian	Sub	978	G=0.538	A=0.462
1000Genomes	American	Sub	694	G=0.608	A=0.392
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.8201	A=0.1799
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.7398	A=0.2602
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.7578	A=0.2422
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.2816	A=0.7184
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	G=0.5643	A=0.4357
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.313	A=0.687
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.572	A=0.428
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.683	A=0.317
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.731	A=0.269
HGDP-CEPH-db Supplement 1	Africa	Sub	242	G=0.764	A=0.236
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.421	A=0.579
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=0.60	A=0.40
HapMap	Global	Study-wide	1884	G=0.6088	A=0.3912
HapMap	American	Sub	768	G=0.603	A=0.397
HapMap	African	Sub	688	G=0.719	A=0.281
HapMap	Asian	Sub	252	G=0.290	A=0.710
HapMap	Europe	Sub	176	G=0.659	A=0.341
Korean Genome Project	KOREAN	Study-wide	1832	G=0.2795	A=0.7205
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.805	A=0.195
CNV burdens in cranial meningiomas	Global	Study-wide	784	G=0.245	A=0.755
CNV burdens in cranial meningiomas	CRM	Sub	784	G=0.245	A=0.755
Northern Sweden	ACPOP	Study-wide	600	G=0.830	A=0.170
SGDP_PRJ	Global	Study-wide	374	G=0.326	A=0.674
Qatari	Global	Study-wide	216	G=0.630	A=0.370
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	86	G=0.79	A=0.21
The Danish reference pan genome	Danish	Study-wide	40	G=0.75	A=0.25
Siberian	Global	Study-wide	32	G=0.38	A=0.62

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 10	NC_000010.11:g.8746307G>A
GRCh37.p13 chr 10	NC_000010.10:g.8788270G>A

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 10	NC_000010.11:g.8746307=	NC_000010.11:g.8746307G>A
GRCh37.p13 chr 10	NC_000010.10:g.8788270=	NC_000010.10:g.8788270G>A

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

112 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss1397873	Oct 10, 2002 (108)
2	SC_JCM	ss5948536	Feb 20, 2003 (111)
3	ABI	ss39852441	Mar 13, 2006 (126)
4	ILLUMINA	ss67715935	Nov 29, 2006 (127)
5	ILLUMINA	ss71366122	May 17, 2007 (127)
6	ILLUMINA	ss75378389	Dec 06, 2007 (129)
7	HGSV	ss78625991	Dec 06, 2007 (129)
8	BGI	ss102852235	Dec 01, 2009 (131)
9	1000GENOMES	ss109216297	Jan 23, 2009 (130)
10	KRIBB_YJKIM	ss119468034	Dec 01, 2009 (131)
11	GMI	ss154556549	Dec 01, 2009 (131)
12	ILLUMINA	ss160653418	Dec 01, 2009 (131)
13	ILLUMINA	ss173668723	Jul 04, 2010 (132)
14	BUSHMAN	ss201124207	Jul 04, 2010 (132)
15	1000GENOMES	ss224556657	Jul 14, 2010 (132)
16	1000GENOMES	ss235048113	Jul 15, 2010 (132)
17	1000GENOMES	ss241781139	Jul 15, 2010 (132)
18	GMI	ss280473839	May 04, 2012 (137)
19	ILLUMINA	ss480869059	May 04, 2012 (137)
20	ILLUMINA	ss480887685	May 04, 2012 (137)
21	ILLUMINA	ss481828249	Sep 08, 2015 (146)
22	ILLUMINA	ss485229645	May 04, 2012 (137)
23	ILLUMINA	ss537206789	Sep 08, 2015 (146)
24	TISHKOFF	ss561759585	Apr 25, 2013 (138)
25	SSMP	ss656266652	Apr 25, 2013 (138)
26	ILLUMINA	ss778527919	Sep 08, 2015 (146)
27	ILLUMINA	ss783060752	Sep 08, 2015 (146)
28	ILLUMINA	ss784018856	Sep 08, 2015 (146)
29	ILLUMINA	ss832318721	Sep 08, 2015 (146)
30	ILLUMINA	ss833984418	Sep 08, 2015 (146)
31	EVA-GONL	ss987179191	Aug 21, 2014 (142)
32	JMKIDD_LAB	ss1076748171	Aug 21, 2014 (142)
33	1000GENOMES	ss1336208834	Aug 21, 2014 (142)
34	DDI	ss1426216349	Apr 01, 2015 (144)
35	EVA_GENOME_DK	ss1574907067	Apr 01, 2015 (144)
36	EVA_DECODE	ss1596828545	Apr 01, 2015 (144)
37	EVA_UK10K_ALSPAC	ss1623954774	Apr 01, 2015 (144)
38	EVA_UK10K_TWINSUK	ss1666948807	Apr 01, 2015 (144)
39	EVA_SVP	ss1713156224	Apr 01, 2015 (144)
40	ILLUMINA	ss1751984871	Sep 08, 2015 (146)
41	HAMMER_LAB	ss1806248523	Sep 08, 2015 (146)
42	WEILL_CORNELL_DGM	ss1930501902	Feb 12, 2016 (147)
43	ILLUMINA	ss1946275636	Feb 12, 2016 (147)
44	ILLUMINA	ss1959238678	Feb 12, 2016 (147)
45	GENOMED	ss1967055185	Jul 19, 2016 (147)
46	JJLAB	ss2025974555	Sep 14, 2016 (149)
47	USC_VALOUEV	ss2154217713	Dec 20, 2016 (150)
48	HUMAN_LONGEVITY	ss2172519406	Dec 20, 2016 (150)
49	SYSTEMSBIOZJU	ss2627456402	Nov 08, 2017 (151)
50	ILLUMINA	ss2632673337	Nov 08, 2017 (151)
51	GRF	ss2698442462	Nov 08, 2017 (151)
52	ILLUMINA	ss2710702936	Nov 08, 2017 (151)
53	GNOMAD	ss2885322193	Nov 08, 2017 (151)
54	SWEGEN	ss3005910367	Nov 08, 2017 (151)
55	ILLUMINA	ss3021212843	Nov 08, 2017 (151)
56	BIOINF_KMB_FNS_UNIBA	ss3026771721	Nov 08, 2017 (151)
57	CSHL	ss3348953761	Nov 08, 2017 (151)
58	ILLUMINA	ss3625573396	Oct 12, 2018 (152)
59	ILLUMINA	ss3626383593	Oct 12, 2018 (152)
60	ILLUMINA	ss3630701097	Oct 12, 2018 (152)
61	ILLUMINA	ss3632938075	Oct 12, 2018 (152)
62	ILLUMINA	ss3633634715	Oct 12, 2018 (152)
63	ILLUMINA	ss3634389628	Oct 12, 2018 (152)
64	ILLUMINA	ss3635327528	Oct 12, 2018 (152)
65	ILLUMINA	ss3636069859	Oct 12, 2018 (152)
66	ILLUMINA	ss3637078114	Oct 12, 2018 (152)
67	ILLUMINA	ss3637833321	Oct 12, 2018 (152)
68	ILLUMINA	ss3640096976	Oct 12, 2018 (152)
69	ILLUMINA	ss3642838029	Oct 12, 2018 (152)
70	ILLUMINA	ss3644528326	Oct 12, 2018 (152)
71	ILLUMINA	ss3651561548	Oct 12, 2018 (152)
72	EGCUT_WGS	ss3673437424	Jul 13, 2019 (153)
73	EVA_DECODE	ss3689249922	Jul 13, 2019 (153)
74	ILLUMINA	ss3725134166	Jul 13, 2019 (153)
75	ACPOP	ss3737047597	Jul 13, 2019 (153)
76	ILLUMINA	ss3744065893	Jul 13, 2019 (153)
77	ILLUMINA	ss3744690498	Jul 13, 2019 (153)
78	EVA	ss3747725556	Jul 13, 2019 (153)
79	PAGE_CC	ss3771541099	Jul 13, 2019 (153)
80	ILLUMINA	ss3772191209	Jul 13, 2019 (153)
81	KHV_HUMAN_GENOMES	ss3813088374	Jul 13, 2019 (153)
82	EVA	ss3831959587	Apr 26, 2020 (154)
83	EVA	ss3839510928	Apr 26, 2020 (154)
84	EVA	ss3844977154	Apr 26, 2020 (154)
85	HGDP	ss3847375088	Apr 26, 2020 (154)
86	SGDP_PRJ	ss3873498582	Apr 26, 2020 (154)
87	KRGDB	ss3921437590	Apr 26, 2020 (154)
88	KOGIC	ss3967170887	Apr 26, 2020 (154)
89	EVA	ss3984629548	Apr 26, 2021 (155)
90	EVA	ss3985456999	Apr 26, 2021 (155)
91	EVA	ss4017469844	Apr 26, 2021 (155)
92	TOPMED	ss4841877871	Apr 26, 2021 (155)
93	TOMMO_GENOMICS	ss5196189195	Apr 26, 2021 (155)
94	1000G_HIGH_COVERAGE	ss5282861086	Oct 16, 2022 (156)
95	EVA	ss5315450235	Oct 16, 2022 (156)
96	EVA	ss5391486569	Oct 16, 2022 (156)
97	HUGCELL_USP	ss5478645631	Oct 16, 2022 (156)
98	EVA	ss5509897423	Oct 16, 2022 (156)
99	1000G_HIGH_COVERAGE	ss5576218132	Oct 16, 2022 (156)
100	SANFORD_IMAGENETICS	ss5624239569	Oct 16, 2022 (156)
101	SANFORD_IMAGENETICS	ss5648642677	Oct 16, 2022 (156)
102	TOMMO_GENOMICS	ss5741015303	Oct 16, 2022 (156)
103	EVA	ss5799803124	Oct 16, 2022 (156)
104	YY_MCH	ss5811181198	Oct 16, 2022 (156)
105	EVA	ss5823953336	Oct 16, 2022 (156)
106	EVA	ss5847367497	Oct 16, 2022 (156)
107	EVA	ss5847586400	Oct 16, 2022 (156)
108	EVA	ss5849430486	Oct 16, 2022 (156)
109	EVA	ss5877669792	Oct 16, 2022 (156)
110	EVA	ss5939926152	Oct 16, 2022 (156)
111	EVA	ss5979316317	Oct 16, 2022 (156)
112	EVA	ss5980594144	Oct 16, 2022 (156)
113	1000Genomes	NC_000010.10 - 8788270	Oct 12, 2018 (152)
114	1000Genomes_30x	NC_000010.11 - 8746307	Oct 16, 2022 (156)
115	The Avon Longitudinal Study of Parents and Children	NC_000010.10 - 8788270	Oct 12, 2018 (152)
116	Genetic variation in the Estonian population	NC_000010.10 - 8788270	Oct 12, 2018 (152)
117	The Danish reference pan genome	NC_000010.10 - 8788270	Apr 26, 2020 (154)
118	gnomAD - Genomes	NC_000010.11 - 8746307	Apr 26, 2021 (155)
119	Genome of the Netherlands Release 5	NC_000010.10 - 8788270	Apr 26, 2020 (154)
120	HGDP-CEPH-db Supplement 1	NC_000010.9 - 8828276	Apr 26, 2020 (154)
121	HapMap	NC_000010.11 - 8746307	Apr 26, 2020 (154)
122	KOREAN population from KRGDB	NC_000010.10 - 8788270	Apr 26, 2020 (154)
123	Korean Genome Project	NC_000010.11 - 8746307	Apr 26, 2020 (154)
124	Northern Sweden	NC_000010.10 - 8788270	Jul 13, 2019 (153)
125	The PAGE Study	NC_000010.11 - 8746307	Jul 13, 2019 (153)
126	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000010.10 - 8788270	Apr 26, 2021 (155)
127	CNV burdens in cranial meningiomas	NC_000010.10 - 8788270	Apr 26, 2021 (155)
128	Qatari	NC_000010.10 - 8788270	Apr 26, 2020 (154)
129	SGDP_PRJ	NC_000010.10 - 8788270	Apr 26, 2020 (154)
130	Siberian	NC_000010.10 - 8788270	Apr 26, 2020 (154)
131	8.3KJPN	NC_000010.10 - 8788270	Apr 26, 2021 (155)
132	14KJPN	NC_000010.11 - 8746307	Oct 16, 2022 (156)
133	TopMed	NC_000010.11 - 8746307	Apr 26, 2021 (155)
134	UK 10K study - Twins	NC_000010.10 - 8788270	Oct 12, 2018 (152)
135	ALFA	NC_000010.11 - 8746307	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss78625991	NC_000010.8:8828275:G:A	NC_000010.11:8746306:G:A	(self)
52980, ss109216297, ss201124207, ss280473839, ss480869059, ss1596828545, ss1713156224, ss3642838029, ss3847375088	NC_000010.9:8828275:G:A	NC_000010.11:8746306:G:A	(self)
48553190, 26980048, 19175672, 2024827, 12033376, 28614984, 10332462, 682926, 179004, 12543832, 25515562, 6734067, 54158502, 26980048, ss224556657, ss235048113, ss241781139, ss480887685, ss481828249, ss485229645, ss537206789, ss561759585, ss656266652, ss778527919, ss783060752, ss784018856, ss832318721, ss833984418, ss987179191, ss1076748171, ss1336208834, ss1426216349, ss1574907067, ss1623954774, ss1666948807, ss1751984871, ss1806248523, ss1930501902, ss1946275636, ss1959238678, ss1967055185, ss2025974555, ss2154217713, ss2627456402, ss2632673337, ss2698442462, ss2710702936, ss2885322193, ss3005910367, ss3021212843, ss3348953761, ss3625573396, ss3626383593, ss3630701097, ss3632938075, ss3633634715, ss3634389628, ss3635327528, ss3636069859, ss3637078114, ss3637833321, ss3640096976, ss3644528326, ss3651561548, ss3673437424, ss3737047597, ss3744065893, ss3744690498, ss3747725556, ss3772191209, ss3831959587, ss3839510928, ss3873498582, ss3921437590, ss3984629548, ss3985456999, ss4017469844, ss5196189195, ss5315450235, ss5391486569, ss5509897423, ss5624239569, ss5648642677, ss5799803124, ss5823953336, ss5847367497, ss5847586400, ss5939926152, ss5979316317, ss5980594144	NC_000010.10:8788269:G:A	NC_000010.11:8746306:G:A	(self)
63744067, 342971393, 335348, 23548888, 762568, 74852407, 57423526, 12788252051, ss2172519406, ss3026771721, ss3689249922, ss3725134166, ss3771541099, ss3813088374, ss3844977154, ss3967170887, ss4841877871, ss5282861086, ss5478645631, ss5576218132, ss5741015303, ss5811181198, ss5849430486, ss5877669792	NC_000010.11:8746306:G:A	NC_000010.11:8746306:G:A	(self)
ss1397873, ss5948536, ss39852441, ss67715935, ss71366122, ss75378389, ss102852235, ss119468034, ss154556549, ss160653418, ss173668723	NT_008705.16:8728269:G:A	NC_000010.11:8746306:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3897990

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3897990