Name: rs362588
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs362588

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr20:10290277 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.158370 (41919/264690, TOPMED)
G=0.152494 (21365/140104, GnomAD)
G=0.134651 (17206/127782, ALFA) (+ 19 more)
G=0.15761 (12402/78688, PAGE_STUDY)
G=0.00018 (5/28258, 14KJPN)
G=0.00024 (4/16760, 8.3KJPN)
G=0.1201 (769/6404, 1000G_30x)
G=0.1168 (585/5008, 1000G)
G=0.1429 (640/4480, Estonian)
G=0.1349 (520/3854, ALSPAC)
G=0.1316 (488/3708, TWINSUK)
G=0.1133 (233/2056, HGDP_Stanford)
G=0.1770 (274/1548, HapMap)
G=0.142 (142/998, GoNL)
G=0.145 (87/600, NorthernSweden)
G=0.199 (43/216, Qatari)
T=0.44 (39/88, SGDP_PRJ)
G=0.10 (4/40, GENOME_DK)
T=0.50 (6/12, Ancient Sardinia)
G=0.50 (6/12, Ancient Sardinia)
T=0.5 (5/10, Siberian)
G=0.5 (5/10, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SNAP25 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	127782	T=0.865349	A=0.000000, G=0.134651
European	Sub	113260	T=0.863933	A=0.000000, G=0.136067
African	Sub	5464	T=0.8898	A=0.0000, G=0.1102
African Others	Sub	204	T=0.887	A=0.000, G=0.113
African American	Sub	5260	T=0.8899	A=0.0000, G=0.1101
Asian	Sub	376	T=0.995	A=0.000, G=0.005
East Asian	Sub	276	T=0.996	A=0.000, G=0.004
Other Asian	Sub	100	T=0.99	A=0.00, G=0.01
Latin American 1	Sub	606	T=0.870	A=0.000, G=0.130
Latin American 2	Sub	1894	T=0.8596	A=0.0000, G=0.1404
South Asian	Sub	160	T=0.981	A=0.000, G=0.019
Other	Sub	6022	T=0.8600	A=0.0000, G=0.1400

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.841630	G=0.158370
gnomAD - Genomes	Global	Study-wide	140104	T=0.847506	G=0.152494
gnomAD - Genomes	European	Sub	75900	T=0.86652	G=0.13348
gnomAD - Genomes	African	Sub	41964	T=0.82099	G=0.17901
gnomAD - Genomes	American	Sub	13632	T=0.79790	G=0.20210
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.8134	G=0.1866
gnomAD - Genomes	East Asian	Sub	3134	T=0.9994	G=0.0006
gnomAD - Genomes	Other	Sub	2152	T=0.8397	G=0.1603
Allele Frequency Aggregator	Total	Global	127782	T=0.865349	A=0.000000, G=0.134651
Allele Frequency Aggregator	European	Sub	113260	T=0.863933	A=0.000000, G=0.136067
Allele Frequency Aggregator	Other	Sub	6022	T=0.8600	A=0.0000, G=0.1400
Allele Frequency Aggregator	African	Sub	5464	T=0.8898	A=0.0000, G=0.1102
Allele Frequency Aggregator	Latin American 2	Sub	1894	T=0.8596	A=0.0000, G=0.1404
Allele Frequency Aggregator	Latin American 1	Sub	606	T=0.870	A=0.000, G=0.130
Allele Frequency Aggregator	Asian	Sub	376	T=0.995	A=0.000, G=0.005
Allele Frequency Aggregator	South Asian	Sub	160	T=0.981	A=0.000, G=0.019
The PAGE Study	Global	Study-wide	78688	T=0.84239	G=0.15761
The PAGE Study	AfricanAmerican	Sub	32504	T=0.82522	G=0.17478
The PAGE Study	Mexican	Sub	10810	T=0.80407	G=0.19593
The PAGE Study	Asian	Sub	8318	T=0.9983	G=0.0017
The PAGE Study	PuertoRican	Sub	7916	T=0.7839	G=0.2161
The PAGE Study	NativeHawaiian	Sub	4534	T=0.9577	G=0.0423
The PAGE Study	Cuban	Sub	4230	T=0.8187	G=0.1813
The PAGE Study	Dominican	Sub	3828	T=0.7981	G=0.2019
The PAGE Study	CentralAmerican	Sub	2450	T=0.7812	G=0.2188
The PAGE Study	SouthAmerican	Sub	1982	T=0.8002	G=0.1998
The PAGE Study	NativeAmerican	Sub	1260	T=0.8714	G=0.1286
The PAGE Study	SouthAsian	Sub	856	T=0.939	G=0.061
14KJPN	JAPANESE	Study-wide	28258	T=0.99982	G=0.00018
8.3KJPN	JAPANESE	Study-wide	16760	T=0.99976	G=0.00024
1000Genomes_30x	Global	Study-wide	6404	T=0.8799	G=0.1201
1000Genomes_30x	African	Sub	1786	T=0.8152	G=0.1848
1000Genomes_30x	Europe	Sub	1266	T=0.8594	G=0.1406
1000Genomes_30x	South Asian	Sub	1202	T=0.9285	G=0.0715
1000Genomes_30x	East Asian	Sub	1170	T=1.0000	G=0.0000
1000Genomes_30x	American	Sub	980	T=0.821	G=0.179
1000Genomes	Global	Study-wide	5008	T=0.8832	G=0.1168
1000Genomes	African	Sub	1322	T=0.8109	G=0.1891
1000Genomes	East Asian	Sub	1008	T=1.0000	G=0.0000
1000Genomes	Europe	Sub	1006	T=0.8638	G=0.1362
1000Genomes	South Asian	Sub	978	T=0.928	G=0.072
1000Genomes	American	Sub	694	T=0.816	G=0.184
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.8571	G=0.1429
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.8651	G=0.1349
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.8684	G=0.1316
HGDP-CEPH-db Supplement 1	Global	Study-wide	2056	T=0.8867	G=0.1133
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	462	T=0.996	G=0.004
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	412	T=0.915	G=0.085
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	348	T=0.839	G=0.161
HGDP-CEPH-db Supplement 1	Europe	Sub	314	T=0.885	G=0.115
HGDP-CEPH-db Supplement 1	Africa	Sub	238	T=0.773	G=0.227
HGDP-CEPH-db Supplement 1	America	Sub	210	T=0.776	G=0.224
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.96	G=0.04
HapMap	Global	Study-wide	1548	T=0.8230	G=0.1770
HapMap	African	Sub	688	T=0.754	G=0.246
HapMap	American	Sub	598	T=0.871	G=0.129
HapMap	Europe	Sub	174	T=0.839	G=0.161
HapMap	Asian	Sub	88	T=1.00	G=0.00
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.858	G=0.142
Northern Sweden	ACPOP	Study-wide	600	T=0.855	G=0.145
Qatari	Global	Study-wide	216	T=0.801	G=0.199
SGDP_PRJ	Global	Study-wide	88	T=0.44	G=0.56
The Danish reference pan genome	Danish	Study-wide	40	T=0.90	G=0.10
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	12	T=0.50	G=0.50
Siberian	Global	Study-wide	10	T=0.5	G=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 20	NC_000020.11:g.10290277T>A
GRCh38.p14 chr 20	NC_000020.11:g.10290277T>C
GRCh38.p14 chr 20	NC_000020.11:g.10290277T>G
GRCh37.p13 chr 20	NC_000020.10:g.10270925T>A
GRCh37.p13 chr 20	NC_000020.10:g.10270925T>C
GRCh37.p13 chr 20	NC_000020.10:g.10270925T>G
SNAP25 RefSeqGene	NG_029626.1:g.76449T>A
SNAP25 RefSeqGene	NG_029626.1:g.76449T>C
SNAP25 RefSeqGene	NG_029626.1:g.76449T>G

Gene: SNAP25, synaptosome associated protein 25 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SNAP25 transcript variant 3	NM_001322902.2:c.164-2605… NM_001322902.2:c.164-2605T>A	N/A	Intron Variant
SNAP25 transcript variant 4	NM_001322903.2:c.164-2884… NM_001322903.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 5	NM_001322904.2:c.164-2884… NM_001322904.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 6	NM_001322905.2:c.164-2884… NM_001322905.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 7	NM_001322906.2:c.164-2884… NM_001322906.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 8	NM_001322907.2:c.164-2884… NM_001322907.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 9	NM_001322908.2:c.164-2884… NM_001322908.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 10	NM_001322909.2:c.164-2884… NM_001322909.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 11	NM_001322910.2:c.164-2884… NM_001322910.2:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant 1	NM_003081.5:c.164-2605T>A	N/A	Intron Variant
SNAP25 transcript variant 2	NM_130811.4:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant X1	XM_005260808.6:c.164-2884… XM_005260808.6:c.164-2884T>A	N/A	Intron Variant
SNAP25 transcript variant X2	XM_017028021.3:c.164-2605… XM_017028021.3:c.164-2605T>A	N/A	Intron Variant
SNAP25 transcript variant X3	XM_017028022.2:c.164-2605… XM_017028022.2:c.164-2605T>A	N/A	Intron Variant
SNAP25 transcript variant X4	XM_047440391.1:c.164-2884… XM_047440391.1:c.164-2884T>A	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C	G
GRCh38.p14 chr 20	NC_000020.11:g.10290277=	NC_000020.11:g.10290277T>A	NC_000020.11:g.10290277T>C	NC_000020.11:g.10290277T>G
GRCh37.p13 chr 20	NC_000020.10:g.10270925=	NC_000020.10:g.10270925T>A	NC_000020.10:g.10270925T>C	NC_000020.10:g.10270925T>G
SNAP25 RefSeqGene	NG_029626.1:g.76449=	NG_029626.1:g.76449T>A	NG_029626.1:g.76449T>C	NG_029626.1:g.76449T>G
SNAP25 transcript variant 3	NM_001322902.2:c.164-2605=	NM_001322902.2:c.164-2605T>A	NM_001322902.2:c.164-2605T>C	NM_001322902.2:c.164-2605T>G
SNAP25 transcript variant 4	NM_001322903.2:c.164-2884=	NM_001322903.2:c.164-2884T>A	NM_001322903.2:c.164-2884T>C	NM_001322903.2:c.164-2884T>G
SNAP25 transcript variant 5	NM_001322904.2:c.164-2884=	NM_001322904.2:c.164-2884T>A	NM_001322904.2:c.164-2884T>C	NM_001322904.2:c.164-2884T>G
SNAP25 transcript variant 6	NM_001322905.2:c.164-2884=	NM_001322905.2:c.164-2884T>A	NM_001322905.2:c.164-2884T>C	NM_001322905.2:c.164-2884T>G
SNAP25 transcript variant 7	NM_001322906.2:c.164-2884=	NM_001322906.2:c.164-2884T>A	NM_001322906.2:c.164-2884T>C	NM_001322906.2:c.164-2884T>G
SNAP25 transcript variant 8	NM_001322907.2:c.164-2884=	NM_001322907.2:c.164-2884T>A	NM_001322907.2:c.164-2884T>C	NM_001322907.2:c.164-2884T>G
SNAP25 transcript variant 9	NM_001322908.2:c.164-2884=	NM_001322908.2:c.164-2884T>A	NM_001322908.2:c.164-2884T>C	NM_001322908.2:c.164-2884T>G
SNAP25 transcript variant 10	NM_001322909.2:c.164-2884=	NM_001322909.2:c.164-2884T>A	NM_001322909.2:c.164-2884T>C	NM_001322909.2:c.164-2884T>G
SNAP25 transcript variant 11	NM_001322910.2:c.164-2884=	NM_001322910.2:c.164-2884T>A	NM_001322910.2:c.164-2884T>C	NM_001322910.2:c.164-2884T>G
SNAP25 transcript variant 1	NM_003081.3:c.164-2605=	NM_003081.3:c.164-2605T>A	NM_003081.3:c.164-2605T>C	NM_003081.3:c.164-2605T>G
SNAP25 transcript variant 1	NM_003081.5:c.164-2605=	NM_003081.5:c.164-2605T>A	NM_003081.5:c.164-2605T>C	NM_003081.5:c.164-2605T>G
SNAP25 transcript variant 2	NM_130811.2:c.164-2884=	NM_130811.2:c.164-2884T>A	NM_130811.2:c.164-2884T>C	NM_130811.2:c.164-2884T>G
SNAP25 transcript variant 2	NM_130811.4:c.164-2884=	NM_130811.4:c.164-2884T>A	NM_130811.4:c.164-2884T>C	NM_130811.4:c.164-2884T>G
SNAP25 transcript variant X1	XM_005260808.1:c.164-2884=	XM_005260808.1:c.164-2884T>A	XM_005260808.1:c.164-2884T>C	XM_005260808.1:c.164-2884T>G
SNAP25 transcript variant X1	XM_005260808.6:c.164-2884=	XM_005260808.6:c.164-2884T>A	XM_005260808.6:c.164-2884T>C	XM_005260808.6:c.164-2884T>G
SNAP25 transcript variant X2	XM_005260809.1:c.164-2884=	XM_005260809.1:c.164-2884T>A	XM_005260809.1:c.164-2884T>C	XM_005260809.1:c.164-2884T>G
SNAP25 transcript variant X3	XM_005260810.1:c.164-2605=	XM_005260810.1:c.164-2605T>A	XM_005260810.1:c.164-2605T>C	XM_005260810.1:c.164-2605T>G
SNAP25 transcript variant X4	XM_005260811.1:c.164-2605=	XM_005260811.1:c.164-2605T>A	XM_005260811.1:c.164-2605T>C	XM_005260811.1:c.164-2605T>G
SNAP25 transcript variant X5	XM_005260812.1:c.-144-2605=	XM_005260812.1:c.-144-2605T>A	XM_005260812.1:c.-144-2605T>C	XM_005260812.1:c.-144-2605T>G
SNAP25 transcript variant X2	XM_017028021.3:c.164-2605=	XM_017028021.3:c.164-2605T>A	XM_017028021.3:c.164-2605T>C	XM_017028021.3:c.164-2605T>G
SNAP25 transcript variant X3	XM_017028022.2:c.164-2605=	XM_017028022.2:c.164-2605T>A	XM_017028022.2:c.164-2605T>C	XM_017028022.2:c.164-2605T>G
SNAP25 transcript variant X4	XM_047440391.1:c.164-2884=	XM_047440391.1:c.164-2884T>A	XM_047440391.1:c.164-2884T>C	XM_047440391.1:c.164-2884T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

89 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	ACEVAN	ss460042	Jul 12, 2000 (79)
2	ACEVAN	ss4254890	Jan 04, 2002 (102)
3	ILLUMINA	ss67701205	Nov 29, 2006 (127)
4	CSHL-HAPMAP	ss68410274	Jan 12, 2007 (127)
5	ILLUMINA	ss71351371	May 16, 2007 (127)
6	ILLUMINA	ss75360481	Dec 06, 2007 (129)
7	ILLUMINA-UK	ss117484214	Feb 14, 2009 (130)
8	KRIBB_YJKIM	ss119351642	Dec 01, 2009 (131)
9	ILLUMINA	ss160630830	Dec 01, 2009 (131)
10	ILLUMINA	ss173609506	Jul 04, 2010 (132)
11	BUSHMAN	ss203830407	Jul 04, 2010 (132)
12	1000GENOMES	ss228256277	Jul 14, 2010 (132)
13	1000GENOMES	ss237762386	Jul 15, 2010 (132)
14	ILLUMINA	ss480797926	May 04, 2012 (137)
15	ILLUMINA	ss480813616	May 04, 2012 (137)
16	ILLUMINA	ss481738238	Sep 08, 2015 (146)
17	ILLUMINA	ss485193727	May 04, 2012 (137)
18	ILLUMINA	ss537182982	Sep 08, 2015 (146)
19	TISHKOFF	ss566135450	Apr 25, 2013 (138)
20	ILLUMINA	ss778520531	Aug 21, 2014 (142)
21	ILLUMINA	ss783042920	Aug 21, 2014 (142)
22	ILLUMINA	ss784002074	Aug 21, 2014 (142)
23	ILLUMINA	ss832300678	Apr 01, 2015 (144)
24	ILLUMINA	ss833976933	Aug 21, 2014 (142)
25	EVA-GONL	ss994538327	Aug 21, 2014 (142)
26	JMKIDD_LAB	ss1082072795	Aug 21, 2014 (142)
27	1000GENOMES	ss1364062776	Aug 21, 2014 (142)
28	DDI	ss1428995584	Apr 01, 2015 (144)
29	EVA_GENOME_DK	ss1579436805	Apr 01, 2015 (144)
30	EVA_UK10K_ALSPAC	ss1638411284	Apr 01, 2015 (144)
31	EVA_UK10K_TWINSUK	ss1681405317	Apr 01, 2015 (144)
32	EVA_DECODE	ss1698594264	Apr 01, 2015 (144)
33	EVA_DECODE	ss1698594265	Apr 01, 2015 (144)
34	EVA_SVP	ss1713679658	Apr 01, 2015 (144)
35	ILLUMINA	ss1752375346	Sep 08, 2015 (146)
36	HAMMER_LAB	ss1809422400	Sep 08, 2015 (146)
37	WEILL_CORNELL_DGM	ss1938048812	Feb 12, 2016 (147)
38	ILLUMINA	ss1959898751	Feb 12, 2016 (147)
39	GENOMED	ss1969090748	Jul 19, 2016 (147)
40	JJLAB	ss2029803625	Sep 14, 2016 (149)
41	USC_VALOUEV	ss2158357370	Dec 20, 2016 (150)
42	HUMAN_LONGEVITY	ss2241322846	Dec 20, 2016 (150)
43	ILLUMINA	ss2633777212	Nov 08, 2017 (151)
44	GNOMAD	ss2965427238	Nov 08, 2017 (151)
45	AFFY	ss2985830444	Nov 08, 2017 (151)
46	SWEGEN	ss3017867039	Nov 08, 2017 (151)
47	ILLUMINA	ss3022100920	Nov 08, 2017 (151)
48	BIOINF_KMB_FNS_UNIBA	ss3028734812	Nov 08, 2017 (151)
49	CSHL	ss3352419013	Nov 08, 2017 (151)
50	ILLUMINA	ss3628351077	Oct 12, 2018 (152)
51	ILLUMINA	ss3631734974	Oct 12, 2018 (152)
52	ILLUMINA	ss3633244431	Oct 12, 2018 (152)
53	ILLUMINA	ss3633958231	Oct 12, 2018 (152)
54	ILLUMINA	ss3634826643	Oct 12, 2018 (152)
55	ILLUMINA	ss3635643444	Oct 12, 2018 (152)
56	ILLUMINA	ss3636517053	Oct 12, 2018 (152)
57	ILLUMINA	ss3637395517	Oct 12, 2018 (152)
58	ILLUMINA	ss3638334823	Oct 12, 2018 (152)
59	ILLUMINA	ss3640533941	Oct 12, 2018 (152)
60	ILLUMINA	ss3643298367	Oct 12, 2018 (152)
61	ILLUMINA	ss3652555334	Oct 12, 2018 (152)
62	EGCUT_WGS	ss3684584006	Jul 13, 2019 (153)
63	EVA_DECODE	ss3706558601	Jul 13, 2019 (153)
64	EVA_DECODE	ss3706558602	Jul 13, 2019 (153)
65	ILLUMINA	ss3725900092	Jul 13, 2019 (153)
66	ACPOP	ss3743248399	Jul 13, 2019 (153)
67	ILLUMINA	ss3745126543	Jul 13, 2019 (153)
68	EVA	ss3758420994	Jul 13, 2019 (153)
69	PAGE_CC	ss3772036597	Jul 13, 2019 (153)
70	ILLUMINA	ss3772622809	Jul 13, 2019 (153)
71	KHV_HUMAN_GENOMES	ss3821594790	Jul 13, 2019 (153)
72	EVA	ss3835587699	Apr 27, 2020 (154)
73	EVA	ss3841418708	Apr 27, 2020 (154)
74	EVA	ss3846926413	Apr 27, 2020 (154)
75	HGDP	ss3847660896	Apr 27, 2020 (154)
76	SGDP_PRJ	ss3888731376	Apr 27, 2020 (154)
77	EVA	ss3985867555	Apr 27, 2021 (155)
78	TOPMED	ss5082246879	Apr 27, 2021 (155)
79	TOMMO_GENOMICS	ss5228838401	Apr 27, 2021 (155)
80	1000G_HIGH_COVERAGE	ss5308084151	Oct 13, 2022 (156)
81	EVA	ss5315994744	Oct 13, 2022 (156)
82	HUGCELL_USP	ss5500484798	Oct 13, 2022 (156)
83	1000G_HIGH_COVERAGE	ss5614164480	Oct 13, 2022 (156)
84	SANFORD_IMAGENETICS	ss5662864269	Oct 13, 2022 (156)
85	TOMMO_GENOMICS	ss5787825931	Oct 13, 2022 (156)
86	EVA	ss5800016292	Oct 13, 2022 (156)
87	EVA	ss5845443660	Oct 13, 2022 (156)
88	EVA	ss5922672724	Oct 13, 2022 (156)
89	EVA	ss5957765711	Oct 13, 2022 (156)
90	1000Genomes	NC_000020.10 - 10270925	Oct 12, 2018 (152)
91	1000Genomes_30x	NC_000020.11 - 10290277	Oct 13, 2022 (156)
92	The Avon Longitudinal Study of Parents and Children	NC_000020.10 - 10270925	Oct 12, 2018 (152)
93	Genetic variation in the Estonian population	NC_000020.10 - 10270925	Oct 12, 2018 (152)
94	The Danish reference pan genome	NC_000020.10 - 10270925	Apr 27, 2020 (154)
95	gnomAD - Genomes	NC_000020.11 - 10290277	Apr 27, 2021 (155)
96	Genome of the Netherlands Release 5	NC_000020.10 - 10270925	Apr 27, 2020 (154)
97	HGDP-CEPH-db Supplement 1	NC_000020.9 - 10218925	Apr 27, 2020 (154)
98	HapMap	NC_000020.11 - 10290277	Apr 27, 2020 (154)
99	Northern Sweden	NC_000020.10 - 10270925	Jul 13, 2019 (153)
100	The PAGE Study	NC_000020.11 - 10290277	Jul 13, 2019 (153)
101	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000020.10 - 10270925	Apr 27, 2021 (155)
102	Qatari	NC_000020.10 - 10270925	Apr 27, 2020 (154)
103	SGDP_PRJ	NC_000020.10 - 10270925	Apr 27, 2020 (154)
104	Siberian	NC_000020.10 - 10270925	Apr 27, 2020 (154)
105	8.3KJPN	NC_000020.10 - 10270925	Apr 27, 2021 (155)
106	14KJPN	NC_000020.11 - 10290277	Oct 13, 2022 (156)
107	TopMed	NC_000020.11 - 10290277	Apr 27, 2021 (155)
108	UK 10K study - Twins	NC_000020.10 - 10270925	Oct 12, 2018 (152)
109	ALFA	NC_000020.11 - 10290277	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
14518586570	NC_000020.11:10290276:T:A	NC_000020.11:10290276:T:A	(self)
ss1698594264	NC_000020.9:10218924:T:C	NC_000020.11:10290276:T:C	(self)
ss3706558601	NC_000020.11:10290276:T:C	NC_000020.11:10290276:T:C	(self)
338788, ss117484214, ss160630830, ss203830407, ss480797926, ss1698594265, ss1713679658, ss3643298367, ss3847660896	NC_000020.9:10218924:T:G	NC_000020.11:10290276:T:G	(self)
77502169, 42903721, 30322254, 5601744, 19116446, 16533264, 1093482, 20090734, 40748356, 10873724, 86807708, 42903721, ss228256277, ss237762386, ss480813616, ss481738238, ss485193727, ss537182982, ss566135450, ss778520531, ss783042920, ss784002074, ss832300678, ss833976933, ss994538327, ss1082072795, ss1364062776, ss1428995584, ss1579436805, ss1638411284, ss1681405317, ss1752375346, ss1809422400, ss1938048812, ss1959898751, ss1969090748, ss2029803625, ss2158357370, ss2633777212, ss2965427238, ss2985830444, ss3017867039, ss3022100920, ss3352419013, ss3628351077, ss3631734974, ss3633244431, ss3633958231, ss3634826643, ss3635643444, ss3636517053, ss3637395517, ss3638334823, ss3640533941, ss3652555334, ss3684584006, ss3743248399, ss3745126543, ss3758420994, ss3772622809, ss3835587699, ss3841418708, ss3888731376, ss3985867555, ss5228838401, ss5315994744, ss5662864269, ss5800016292, ss5845443660, ss5957765711	NC_000020.10:10270924:T:G	NC_000020.11:10290276:T:G	(self)
101690415, 546469144, 2070485, 1258066, 121663035, 357355824, 14518586570, ss2241322846, ss3028734812, ss3706558602, ss3725900092, ss3772036597, ss3821594790, ss3846926413, ss5082246879, ss5308084151, ss5500484798, ss5614164480, ss5787825931, ss5922672724	NC_000020.11:10290276:T:G	NC_000020.11:10290276:T:G	(self)
ss460042, ss4254890, ss67701205, ss68410274, ss71351371, ss75360481, ss119351642, ss173609506	NT_011387.8:10210924:T:G	NC_000020.11:10290276:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs362588

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs362588