Name: rs2844502
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2844502

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:31477439 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.342140 (90561/264690, TOPMED)
A=0.353197 (71985/203810, ALFA)
A=0.335403 (46788/139498, GnomAD) (+ 19 more)
A=0.46831 (13224/28238, 14KJPN)
A=0.46597 (7804/16748, 8.3KJPN)
A=0.3720 (2382/6404, 1000G_30x)
A=0.3784 (1895/5008, 1000G)
A=0.3545 (1588/4480, Estonian)
A=0.3306 (1274/3854, ALSPAC)
A=0.3536 (1311/3708, TWINSUK)
G=0.4594 (1346/2930, KOREAN)
A=0.3282 (621/1892, HapMap)
A=0.3134 (356/1136, Daghestan)
A=0.375 (374/998, GoNL)
G=0.449 (352/784, PRJEB37584)
A=0.345 (207/600, NorthernSweden)
G=0.329 (110/334, SGDP_PRJ)
A=0.236 (51/216, Qatari)
G=0.444 (95/214, Vietnamese)
A=0.13 (8/60, Ancient Sardinia)
A=0.38 (15/40, GENOME_DK)
G=0.44 (15/34, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: None
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	203904	G=0.646804	A=0.353196
European	Sub	171744	G=0.656925	A=0.343075
African	Sub	7310	G=0.6904	A=0.3096
African Others	Sub	270	G=0.689	A=0.311
African American	Sub	7040	G=0.6905	A=0.3095
Asian	Sub	6530	G=0.4224	A=0.5776
East Asian	Sub	4706	G=0.4275	A=0.5725
Other Asian	Sub	1824	G=0.4090	A=0.5910
Latin American 1	Sub	568	G=0.657	A=0.343
Latin American 2	Sub	5260	G=0.6192	A=0.3808
South Asian	Sub	326	G=0.598	A=0.402
Other	Sub	12166	G=0.61096	A=0.38904

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.657860	A=0.342140
Allele Frequency Aggregator	Total	Global	203810	G=0.646803	A=0.353197
Allele Frequency Aggregator	European	Sub	171668	G=0.656942	A=0.343058
Allele Frequency Aggregator	Other	Sub	12148	G=0.61072	A=0.38928
Allele Frequency Aggregator	African	Sub	7310	G=0.6904	A=0.3096
Allele Frequency Aggregator	Asian	Sub	6530	G=0.4224	A=0.5776
Allele Frequency Aggregator	Latin American 2	Sub	5260	G=0.6192	A=0.3808
Allele Frequency Aggregator	Latin American 1	Sub	568	G=0.657	A=0.343
Allele Frequency Aggregator	South Asian	Sub	326	G=0.598	A=0.402
gnomAD - Genomes	Global	Study-wide	139498	G=0.664597	A=0.335403
gnomAD - Genomes	European	Sub	75782	G=0.66314	A=0.33686
gnomAD - Genomes	African	Sub	41598	G=0.69729	A=0.30271
gnomAD - Genomes	American	Sub	13544	G=0.64966	A=0.35034
gnomAD - Genomes	Ashkenazi Jewish	Sub	3316	G=0.6125	A=0.3875
gnomAD - Genomes	East Asian	Sub	3108	G=0.3829	A=0.6171
gnomAD - Genomes	Other	Sub	2150	G=0.6651	A=0.3349
14KJPN	JAPANESE	Study-wide	28238	G=0.53169	A=0.46831
8.3KJPN	JAPANESE	Study-wide	16748	G=0.53403	A=0.46597
1000Genomes_30x	Global	Study-wide	6404	G=0.6280	A=0.3720
1000Genomes_30x	African	Sub	1786	G=0.7223	A=0.2777
1000Genomes_30x	Europe	Sub	1266	G=0.6951	A=0.3049
1000Genomes_30x	South Asian	Sub	1202	G=0.6414	A=0.3586
1000Genomes_30x	East Asian	Sub	1170	G=0.3940	A=0.6060
1000Genomes_30x	American	Sub	980	G=0.633	A=0.367
1000Genomes	Global	Study-wide	5008	G=0.6216	A=0.3784
1000Genomes	African	Sub	1322	G=0.7118	A=0.2882
1000Genomes	East Asian	Sub	1008	G=0.4008	A=0.5992
1000Genomes	Europe	Sub	1006	G=0.6968	A=0.3032
1000Genomes	South Asian	Sub	978	G=0.637	A=0.363
1000Genomes	American	Sub	694	G=0.640	A=0.360
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.6455	A=0.3545
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.6694	A=0.3306
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.6464	A=0.3536
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.4594	A=0.5406
HapMap	Global	Study-wide	1892	G=0.6718	A=0.3282
HapMap	American	Sub	770	G=0.632	A=0.368
HapMap	African	Sub	692	G=0.777	A=0.223
HapMap	Asian	Sub	254	G=0.520	A=0.480
HapMap	Europe	Sub	176	G=0.648	A=0.352
Genome-wide autozygosity in Daghestan	Global	Study-wide	1136	G=0.6866	A=0.3134
Genome-wide autozygosity in Daghestan	Daghestan	Sub	628	G=0.707	A=0.293
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	G=0.701	A=0.299
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	G=0.680	A=0.320
Genome-wide autozygosity in Daghestan	Europe	Sub	108	G=0.593	A=0.407
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	G=0.64	A=0.36
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	G=0.69	A=0.31
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.625	A=0.375
CNV burdens in cranial meningiomas	Global	Study-wide	784	G=0.449	A=0.551
CNV burdens in cranial meningiomas	CRM	Sub	784	G=0.449	A=0.551
Northern Sweden	ACPOP	Study-wide	600	G=0.655	A=0.345
SGDP_PRJ	Global	Study-wide	334	G=0.329	A=0.671
Qatari	Global	Study-wide	216	G=0.764	A=0.236
A Vietnamese Genetic Variation Database	Global	Study-wide	214	G=0.444	A=0.556
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	60	G=0.87	A=0.13
The Danish reference pan genome	Danish	Study-wide	40	G=0.62	A=0.38
Siberian	Global	Study-wide	34	G=0.44	A=0.56

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.31477439G>A
GRCh37.p13 chr 6	NC_000006.11:g.31445216G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.3:g.2954764A>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.2:g.2954870A>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.2:g.2733326G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.1:g.2738922G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.2:g.2724965G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.1:g.2730550G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.2:g.2776690G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.1:g.2775988G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.2:g.2819411A>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.1:g.2824996A>G

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 6	NC_000006.12:g.31477439=	NC_000006.12:g.31477439G>A
GRCh37.p13 chr 6	NC_000006.11:g.31445216=	NC_000006.11:g.31445216G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.3:g.2954764A>G	NT_113891.3:g.2954764=
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1	NT_113891.2:g.2954870A>G	NT_113891.2:g.2954870=
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.2:g.2733326=	NT_167248.2:g.2733326G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1	NT_167248.1:g.2738922=	NT_167248.1:g.2738922G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.2:g.2724965=	NT_167245.2:g.2724965G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1	NT_167245.1:g.2730550=	NT_167245.1:g.2730550G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.2:g.2776690=	NT_167249.2:g.2776690G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1	NT_167249.1:g.2775988=	NT_167249.1:g.2775988G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.2:g.2819411A>G	NT_167247.2:g.2819411=
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1	NT_167247.1:g.2824996A>G	NT_167247.1:g.2824996=

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

141 SubSNP, 22 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss4027273	Sep 28, 2001 (100)
2	SI_MHC_SNP	ss12690924	Oct 31, 2003 (118)
3	SC_SNP	ss14795081	Dec 05, 2003 (119)
4	SSAHASNP	ss22424589	Apr 05, 2004 (121)
5	FHCRC	ss23137762	Sep 20, 2004 (126)
6	PERLEGEN	ss23321749	Sep 20, 2004 (123)
7	ABI	ss44681367	Mar 11, 2006 (126)
8	PERLEGEN	ss68971591	May 18, 2007 (127)
9	ILLUMINA	ss75233739	Dec 07, 2007 (129)
10	HGSV	ss77146605	Dec 07, 2007 (129)
11	HGSV	ss78050154	Dec 07, 2007 (129)
12	BCMHGSC_JDW	ss93436211	Mar 24, 2008 (129)
13	BGI	ss105990967	Feb 04, 2009 (130)
14	1000GENOMES	ss109900150	Feb 13, 2009 (137)
15	ILLUMINA-UK	ss116393885	Feb 14, 2009 (130)
16	KRIBB_YJKIM	ss119447900	Dec 01, 2009 (131)
17	ILLUMINA	ss160588267	Dec 01, 2009 (131)
18	COMPLETE_GENOMICS	ss162196747	Jul 04, 2010 (132)
19	ILLUMINA	ss173497753	Jul 04, 2010 (132)
20	BUSHMAN	ss201624257	Jul 04, 2010 (132)
21	1000GENOMES	ss222303545	Jul 14, 2010 (137)
22	1000GENOMES	ss233398563	Jul 14, 2010 (137)
23	1000GENOMES	ss240469342	Jul 15, 2010 (137)
24	BL	ss254185475	May 09, 2011 (137)
25	GMI	ss278726222	May 04, 2012 (137)
26	GMI	ss285373825	Apr 25, 2013 (138)
27	PJP	ss293825515	May 09, 2011 (137)
28	ILLUMINA	ss410926520	Sep 17, 2011 (137)
29	ILLUMINA	ss480690917	May 04, 2012 (137)
30	ILLUMINA	ss480706419	May 04, 2012 (137)
31	ILLUMINA	ss481567408	Sep 08, 2015 (146)
32	ILLUMINA	ss485140288	May 04, 2012 (137)
33	EXOME_CHIP	ss491381795	May 04, 2012 (137)
34	ILLUMINA	ss537137197	Sep 08, 2015 (146)
35	TISHKOFF	ss559113551	Apr 25, 2013 (138)
36	SSMP	ss653034576	Apr 25, 2013 (138)
37	ILLUMINA	ss778881868	Sep 08, 2015 (146)
38	ILLUMINA	ss780683942	Sep 08, 2015 (146)
39	ILLUMINA	ss783016431	Sep 08, 2015 (146)
40	ILLUMINA	ss783357363	Sep 08, 2015 (146)
41	ILLUMINA	ss783976534	Sep 08, 2015 (146)
42	ILLUMINA	ss832273883	Sep 08, 2015 (146)
43	ILLUMINA	ss834342877	Sep 08, 2015 (146)
44	EVA-GONL	ss982765079	Aug 21, 2014 (142)
45	JMKIDD_LAB	ss1073505244	Aug 21, 2014 (142)
46	1000GENOMES	ss1319556032	Aug 21, 2014 (142)
47	HAMMER_LAB	ss1397449777	Sep 08, 2015 (146)
48	EVA_GENOME_DK	ss1581606165	Apr 01, 2015 (144)
49	EVA_DECODE	ss1592309108	Apr 01, 2015 (144)
50	EVA_UK10K_ALSPAC	ss1615276254	Apr 01, 2015 (144)
51	EVA_UK10K_TWINSUK	ss1658270287	Apr 01, 2015 (144)
52	EVA_SVP	ss1712850874	Apr 01, 2015 (144)
53	ILLUMINA	ss1752628435	Sep 08, 2015 (146)
54	ILLUMINA	ss1752628436	Sep 08, 2015 (146)
55	HAMMER_LAB	ss1804357616	Sep 08, 2015 (146)
56	ILLUMINA	ss1917802371	Feb 12, 2016 (147)
57	WEILL_CORNELL_DGM	ss1926017469	Feb 12, 2016 (147)
58	ILLUMINA	ss1946173271	Feb 12, 2016 (147)
59	ILLUMINA	ss1958888007	Feb 12, 2016 (147)
60	GENOMED	ss1970357114	Jul 19, 2016 (147)
61	JJLAB	ss2023641676	Sep 14, 2016 (149)
62	ILLUMINA	ss2094824623	Dec 20, 2016 (150)
63	ILLUMINA	ss2095177855	Dec 20, 2016 (150)
64	USC_VALOUEV	ss2151807982	Dec 20, 2016 (150)
65	HUMAN_LONGEVITY	ss2282942443	Dec 20, 2016 (150)
66	SYSTEMSBIOZJU	ss2626308099	Nov 08, 2017 (151)
67	ILLUMINA	ss2634429559	Nov 08, 2017 (151)
68	ILLUMINA	ss2634429560	Nov 08, 2017 (151)
69	GRF	ss2707401613	Nov 08, 2017 (151)
70	AFFY	ss2985361683	Nov 08, 2017 (151)
71	AFFY	ss2985993915	Nov 08, 2017 (151)
72	SWEGEN	ss2998794518	Nov 08, 2017 (151)
73	ILLUMINA	ss3022599219	Nov 08, 2017 (151)
74	BIOINF_KMB_FNS_UNIBA	ss3025607868	Nov 08, 2017 (151)
75	ILLUMINA	ss3629502927	Oct 12, 2018 (152)
76	ILLUMINA	ss3629502928	Oct 12, 2018 (152)
77	ILLUMINA	ss3632348180	Oct 12, 2018 (152)
78	ILLUMINA	ss3633415185	Oct 12, 2018 (152)
79	ILLUMINA	ss3634137659	Oct 12, 2018 (152)
80	ILLUMINA	ss3635056761	Oct 12, 2018 (152)
81	ILLUMINA	ss3635056762	Oct 12, 2018 (152)
82	ILLUMINA	ss3635818684	Oct 12, 2018 (152)
83	ILLUMINA	ss3636777926	Oct 12, 2018 (152)
84	ILLUMINA	ss3637571467	Oct 12, 2018 (152)
85	ILLUMINA	ss3638619626	Oct 12, 2018 (152)
86	ILLUMINA	ss3640764060	Oct 12, 2018 (152)
87	ILLUMINA	ss3640764061	Oct 12, 2018 (152)
88	ILLUMINA	ss3641193350	Oct 12, 2018 (152)
89	ILLUMINA	ss3641490481	Oct 12, 2018 (152)
90	ILLUMINA	ss3643561013	Oct 12, 2018 (152)
91	ILLUMINA	ss3644906335	Oct 12, 2018 (152)
92	ILLUMINA	ss3653111739	Oct 12, 2018 (152)
93	ILLUMINA	ss3653111740	Oct 12, 2018 (152)
94	ILLUMINA	ss3654128003	Oct 12, 2018 (152)
95	EGCUT_WGS	ss3666709651	Jul 13, 2019 (153)
96	EVA_DECODE	ss3716907211	Jul 13, 2019 (153)
97	ACPOP	ss3733360790	Jul 13, 2019 (153)
98	ILLUMINA	ss3744549796	Jul 13, 2019 (153)
99	ILLUMINA	ss3745356768	Jul 13, 2019 (153)
100	ILLUMINA	ss3745356769	Jul 13, 2019 (153)
101	EVA	ss3764821549	Jul 13, 2019 (153)
102	ILLUMINA	ss3772850471	Jul 13, 2019 (153)
103	ILLUMINA	ss3772850472	Jul 13, 2019 (153)
104	PACBIO	ss3785425237	Jul 13, 2019 (153)
105	PACBIO	ss3790784680	Jul 13, 2019 (153)
106	PACBIO	ss3795662195	Jul 13, 2019 (153)
107	KHV_HUMAN_GENOMES	ss3807976929	Jul 13, 2019 (153)
108	EVA	ss3829832195	Apr 26, 2020 (154)
109	EVA	ss3838394250	Apr 26, 2020 (154)
110	EVA	ss3843836416	Apr 26, 2020 (154)
111	SGDP_PRJ	ss3864253477	Apr 26, 2020 (154)
112	KRGDB	ss3911028195	Apr 26, 2020 (154)
113	EVA	ss3984565619	Apr 26, 2021 (155)
114	EVA	ss3985212997	Apr 26, 2021 (155)
115	EVA	ss4017266187	Apr 26, 2021 (155)
116	VINODS	ss4025188334	Apr 26, 2021 (155)
117	VINODS	ss4025208984	Apr 26, 2021 (155)
118	VINODS	ss4025247766	Apr 26, 2021 (155)
119	VINODS	ss4025266362	Apr 26, 2021 (155)
120	VINODS	ss4025287283	Apr 26, 2021 (155)
121	TOPMED	ss4698374293	Apr 26, 2021 (155)
122	TOMMO_GENOMICS	ss5176834249	Apr 26, 2021 (155)
123	1000G_HIGH_COVERAGE	ss5267934701	Oct 13, 2022 (156)
124	EVA	ss5315142025	Oct 13, 2022 (156)
125	EVA	ss5364719754	Oct 13, 2022 (156)
126	HUGCELL_USP	ss5465669223	Oct 13, 2022 (156)
127	EVA	ss5508427725	Oct 13, 2022 (156)
128	1000G_HIGH_COVERAGE	ss5553590303	Oct 13, 2022 (156)
129	SANFORD_IMAGENETICS	ss5624623631	Oct 13, 2022 (156)
130	SANFORD_IMAGENETICS	ss5640088179	Oct 13, 2022 (156)
131	TOMMO_GENOMICS	ss5714688347	Oct 13, 2022 (156)
132	EVA	ss5799683562	Oct 13, 2022 (156)
133	YY_MCH	ss5807306534	Oct 13, 2022 (156)
134	EVA	ss5842025766	Oct 13, 2022 (156)
135	EVA	ss5847290840	Oct 13, 2022 (156)
136	EVA	ss5848089533	Oct 13, 2022 (156)
137	EVA	ss5855283441	Oct 13, 2022 (156)
138	EVA	ss5883242062	Oct 13, 2022 (156)
139	EVA	ss5968590166	Oct 13, 2022 (156)
140	EVA	ss5979779981	Oct 13, 2022 (156)
141	EVA	ss5980356445	Oct 13, 2022 (156)
142	1000Genomes	NC_000006.11 - 31445216	Oct 12, 2018 (152)
143	1000Genomes_30x	NC_000006.12 - 31477439	Oct 13, 2022 (156)
144	The Avon Longitudinal Study of Parents and Children	NC_000006.11 - 31445216	Oct 12, 2018 (152)
145	Genome-wide autozygosity in Daghestan	NC_000006.10 - 31553195	Apr 26, 2020 (154)
146	Genetic variation in the Estonian population	NC_000006.11 - 31445216	Oct 12, 2018 (152)
147	The Danish reference pan genome	NC_000006.11 - 31445216	Apr 26, 2020 (154)
148	gnomAD - Genomes	NC_000006.12 - 31477439	Apr 26, 2021 (155)
149	Genome of the Netherlands Release 5	NC_000006.11 - 31445216	Apr 26, 2020 (154)
150	HapMap	NC_000006.12 - 31477439	Apr 26, 2020 (154)
151	KOREAN population from KRGDB	NC_000006.11 - 31445216	Apr 26, 2020 (154)
152	Northern Sweden	NC_000006.11 - 31445216	Jul 13, 2019 (153)
153	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000006.11 - 31445216	Apr 26, 2021 (155)
154	CNV burdens in cranial meningiomas	NC_000006.11 - 31445216	Apr 26, 2021 (155)
155	Qatari	NC_000006.11 - 31445216	Apr 26, 2020 (154)
156	SGDP_PRJ	NC_000006.11 - 31445216	Apr 26, 2020 (154)
157	Siberian	NC_000006.11 - 31445216	Apr 26, 2020 (154)
158	8.3KJPN	NC_000006.11 - 31445216	Apr 26, 2021 (155)
159	14KJPN	NC_000006.12 - 31477439	Oct 13, 2022 (156)
160	TopMed	NC_000006.12 - 31477439	Apr 26, 2021 (155)
161	UK 10K study - Twins	NC_000006.11 - 31445216	Oct 12, 2018 (152)
162	A Vietnamese Genetic Variation Database	NC_000006.11 - 31445216	Jul 13, 2019 (153)
163	ALFA	NC_000006.12 - 31477439	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs16899684	Oct 08, 2004 (123)
rs17206966	Mar 11, 2006 (126)
rs116717094	May 04, 2012 (137)
rs117357217	Aug 16, 2010 (132)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss77146605, ss78050154	NC_000006.9:31553194:G:A	NC_000006.12:31477438:G:A	(self)
424428, ss93436211, ss109900150, ss116393885, ss162196747, ss201624257, ss254185475, ss278726222, ss285373825, ss293825515, ss480690917, ss1397449777, ss1592309108, ss1712850874, ss3643561013	NC_000006.10:31553194:G:A	NC_000006.12:31477438:G:A	(self)
31323346, 17465592, 12447899, 7771104, 7763929, 18205589, 6645655, 438924, 115022, 8059399, 16270457, 4324336, 34803556, 17465592, 3873108, ss222303545, ss233398563, ss240469342, ss480706419, ss481567408, ss485140288, ss491381795, ss537137197, ss559113551, ss653034576, ss778881868, ss780683942, ss783016431, ss783357363, ss783976534, ss832273883, ss834342877, ss982765079, ss1073505244, ss1319556032, ss1581606165, ss1615276254, ss1658270287, ss1752628435, ss1752628436, ss1804357616, ss1917802371, ss1926017469, ss1946173271, ss1958888007, ss1970357114, ss2023641676, ss2094824623, ss2095177855, ss2151807982, ss2626308099, ss2634429559, ss2634429560, ss2707401613, ss2985361683, ss2985993915, ss2998794518, ss3022599219, ss3629502927, ss3629502928, ss3632348180, ss3633415185, ss3634137659, ss3635056761, ss3635056762, ss3635818684, ss3636777926, ss3637571467, ss3638619626, ss3640764060, ss3640764061, ss3641193350, ss3641490481, ss3644906335, ss3653111739, ss3653111740, ss3654128003, ss3666709651, ss3733360790, ss3744549796, ss3745356768, ss3745356769, ss3764821549, ss3772850471, ss3772850472, ss3785425237, ss3790784680, ss3795662195, ss3829832195, ss3838394250, ss3864253477, ss3911028195, ss3984565619, ss3985212997, ss4017266187, ss5176834249, ss5315142025, ss5364719754, ss5508427725, ss5624623631, ss5640088179, ss5799683562, ss5842025766, ss5847290840, ss5848089533, ss5968590166, ss5979779981, ss5980356445	NC_000006.11:31445215:G:A	NC_000006.12:31477438:G:A	(self)
41116238, 221202996, 3099827, 48525451, 535751851, 15860280454, ss2282942443, ss3025607868, ss3716907211, ss3807976929, ss3843836416, ss4698374293, ss5267934701, ss5465669223, ss5553590303, ss5714688347, ss5807306534, ss5855283441, ss5883242062	NC_000006.12:31477438:G:A	NC_000006.12:31477438:G:A	(self)
ss14795081, ss22424589	NT_007592.13:22299850:A:A	NC_000006.12:31477438:G:A	(self)
ss4027273, ss12690924, ss23137762, ss23321749, ss44681367, ss68971591, ss75233739, ss105990967, ss119447900, ss160588267, ss173497753, ss410926520	NT_007592.15:31385215:G:A	NC_000006.12:31477438:G:A	(self)
ss4025188334	NT_113891.3:2954763:A:A	NC_000006.12:31477438:G:A	(self)
ss4025208984	NT_167245.2:2724964:G:A	NC_000006.12:31477438:G:A	(self)
ss4025247766	NT_167247.2:2819410:A:A	NC_000006.12:31477438:G:A	(self)
ss4025266362	NT_167248.2:2733325:G:A	NC_000006.12:31477438:G:A	(self)
ss4025287283	NT_167249.2:2776689:G:A	NC_000006.12:31477438:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs2844502

PMID	Title	Author	Year	Journal
30315195	Discovering Genetic Factors for psoriasis through exhaustively searching for significant second order SNP-SNP interactions.	Lee KY et al.	2018	Scientific reports

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs2844502