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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2534660

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr6:31504346 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A / G>C
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.316276 (83715/264690, TOPMED)
A=0.337885 (43029/127348, GnomAD)
A=0.19140 (5380/28108, 14KJPN) (+ 14 more)
A=0.18703 (3107/16612, 8.3KJPN)
A=0.30762 (4813/15646, ALFA)
A=0.2901 (1858/6404, 1000G_30x)
A=0.2931 (1468/5008, 1000G)
A=0.3018 (1163/3854, ALSPAC)
A=0.3223 (1195/3708, TWINSUK)
A=0.2623 (766/2920, KOREAN)
A=0.3048 (342/1122, Daghestan)
A=0.349 (348/998, GoNL)
A=0.268 (161/600, NorthernSweden)
G=0.375 (105/280, SGDP_PRJ)
A=0.306 (66/216, Qatari)
A=0.297 (60/202, Vietnamese)
G=0.46 (12/26, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
MICB : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 15646 G=0.69238 A=0.30762, C=0.00000
European Sub 11736 G=0.69461 A=0.30539, C=0.00000
African Sub 2476 G=0.6636 A=0.3364, C=0.0000
African Others Sub 96 G=0.65 A=0.35, C=0.00
African American Sub 2380 G=0.6643 A=0.3357, C=0.0000
Asian Sub 108 G=0.648 A=0.352, C=0.000
East Asian Sub 84 G=0.64 A=0.36, C=0.00
Other Asian Sub 24 G=0.67 A=0.33, C=0.00
Latin American 1 Sub 146 G=0.630 A=0.370, C=0.000
Latin American 2 Sub 610 G=0.785 A=0.215, C=0.000
South Asian Sub 94 G=0.70 A=0.30, C=0.00
Other Sub 476 G=0.695 A=0.305, C=0.000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.683724 A=0.316276
gnomAD - Genomes Global Study-wide 127348 G=0.662115 A=0.337885
gnomAD - Genomes European Sub 70848 G=0.68094 A=0.31906
gnomAD - Genomes African Sub 37904 G=0.60880 A=0.39120
gnomAD - Genomes American Sub 10398 G=0.72331 A=0.27669
gnomAD - Genomes Ashkenazi Jewish Sub 3252 G=0.6202 A=0.3798
gnomAD - Genomes East Asian Sub 3040 G=0.7115 A=0.2885
gnomAD - Genomes Other Sub 1906 G=0.6815 A=0.3185
14KJPN JAPANESE Study-wide 28108 G=0.80860 A=0.19140
8.3KJPN JAPANESE Study-wide 16612 G=0.81297 A=0.18703
Allele Frequency Aggregator Total Global 15646 G=0.69238 A=0.30762, C=0.00000
Allele Frequency Aggregator European Sub 11736 G=0.69461 A=0.30539, C=0.00000
Allele Frequency Aggregator African Sub 2476 G=0.6636 A=0.3364, C=0.0000
Allele Frequency Aggregator Latin American 2 Sub 610 G=0.785 A=0.215, C=0.000
Allele Frequency Aggregator Other Sub 476 G=0.695 A=0.305, C=0.000
Allele Frequency Aggregator Latin American 1 Sub 146 G=0.630 A=0.370, C=0.000
Allele Frequency Aggregator Asian Sub 108 G=0.648 A=0.352, C=0.000
Allele Frequency Aggregator South Asian Sub 94 G=0.70 A=0.30, C=0.00
1000Genomes_30x Global Study-wide 6404 G=0.7099 A=0.2901
1000Genomes_30x African Sub 1786 G=0.6282 A=0.3718
1000Genomes_30x Europe Sub 1266 G=0.7346 A=0.2654
1000Genomes_30x South Asian Sub 1202 G=0.7446 A=0.2554
1000Genomes_30x East Asian Sub 1170 G=0.7060 A=0.2940
1000Genomes_30x American Sub 980 G=0.789 A=0.211
1000Genomes Global Study-wide 5008 G=0.7069 A=0.2931
1000Genomes African Sub 1322 G=0.6150 A=0.3850
1000Genomes East Asian Sub 1008 G=0.7073 A=0.2927
1000Genomes Europe Sub 1006 G=0.7366 A=0.2634
1000Genomes South Asian Sub 978 G=0.747 A=0.253
1000Genomes American Sub 694 G=0.781 A=0.219
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.6982 A=0.3018
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.6777 A=0.3223
KOREAN population from KRGDB KOREAN Study-wide 2920 G=0.7377 A=0.2623
Genome-wide autozygosity in Daghestan Global Study-wide 1122 G=0.6952 A=0.3048
Genome-wide autozygosity in Daghestan Daghestan Sub 624 G=0.700 A=0.300
Genome-wide autozygosity in Daghestan Near_East Sub 144 G=0.660 A=0.340
Genome-wide autozygosity in Daghestan Central Asia Sub 120 G=0.692 A=0.308
Genome-wide autozygosity in Daghestan Europe Sub 102 G=0.627 A=0.373
Genome-wide autozygosity in Daghestan South Asian Sub 98 G=0.82 A=0.18
Genome-wide autozygosity in Daghestan Caucasus Sub 34 G=0.62 A=0.38
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.651 A=0.349
Northern Sweden ACPOP Study-wide 600 G=0.732 A=0.268
SGDP_PRJ Global Study-wide 280 G=0.375 A=0.625
Qatari Global Study-wide 216 G=0.694 A=0.306
A Vietnamese Genetic Variation Database Global Study-wide 202 G=0.703 A=0.297
Siberian Global Study-wide 26 G=0.46 A=0.54
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 6 NC_000006.12:g.31504346G>A
GRCh38.p14 chr 6 NC_000006.12:g.31504346G>C
GRCh37.p13 chr 6 NC_000006.11:g.31472123G>A
GRCh37.p13 chr 6 NC_000006.11:g.31472123G>C
MICB RefSeqGene NG_021405.1:g.11269G>A
MICB RefSeqGene NG_021405.1:g.11269G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2981688A>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2981688A>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2981794A>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2981794A>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.2:g.2836896G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.2:g.2836896G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.1:g.2786812G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.1:g.2786812G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.2803628G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.2803628G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.2802926G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.2802926G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2846295A>G
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2846295A>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2851880A>G
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2851880A>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2752146G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2752146G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2757731G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2757731G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2760232G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2760232G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2765828G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2765828G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2809428G>A
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2809428G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2815048G>A
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2815048G>C
Gene: MICB, MHC class I polypeptide-related sequence B (plus strand)
Molecule type Change Amino acid[Codon] SO Term
MICB transcript variant 2 NM_001289160.2:c.-26-1271…

NM_001289160.2:c.-26-1271G>A

 		N/A Intron Variant
MICB transcript variant 3 NM_001289161.2:c.71-1271G…

NM_001289161.2:c.71-1271G>A

 		N/A Intron Variant
MICB transcript variant 1 NM_005931.5:c.71-1271G>A N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A C
GRCh38.p14 chr 6 NC_000006.12:g.31504346= NC_000006.12:g.31504346G>A NC_000006.12:g.31504346G>C
GRCh37.p13 chr 6 NC_000006.11:g.31472123= NC_000006.11:g.31472123G>A NC_000006.11:g.31472123G>C
MICB RefSeqGene NG_021405.1:g.11269= NG_021405.1:g.11269G>A NG_021405.1:g.11269G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.3:g.2981688A>G NT_113891.3:g.2981688= NT_113891.3:g.2981688A>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_COX_CTG1 NT_113891.2:g.2981794A>G NT_113891.2:g.2981794= NT_113891.2:g.2981794A>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.2:g.2836896= NT_167244.2:g.2836896G>A NT_167244.2:g.2836896G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_APD_CTG1 NT_167244.1:g.2786812= NT_167244.1:g.2786812G>A NT_167244.1:g.2786812G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.2:g.2803628= NT_167249.2:g.2803628G>A NT_167249.2:g.2803628G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_SSTO_CTG1 NT_167249.1:g.2802926= NT_167249.1:g.2802926G>A NT_167249.1:g.2802926G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.2:g.2846295A>G NT_167247.2:g.2846295= NT_167247.2:g.2846295A>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MCF_CTG1 NT_167247.1:g.2851880A>G NT_167247.1:g.2851880= NT_167247.1:g.2851880A>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.2:g.2752146= NT_167245.2:g.2752146G>A NT_167245.2:g.2752146G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_DBB_CTG1 NT_167245.1:g.2757731= NT_167245.1:g.2757731G>A NT_167245.1:g.2757731G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.2:g.2760232= NT_167248.2:g.2760232G>A NT_167248.2:g.2760232G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_QBL_CTG1 NT_167248.1:g.2765828= NT_167248.1:g.2765828G>A NT_167248.1:g.2765828G>C
GRCh38.p14 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.2:g.2809428= NT_167246.2:g.2809428G>A NT_167246.2:g.2809428G>C
GRCh37.p13 chr 6 alt locus HSCHR6_MHC_MANN_CTG1 NT_167246.1:g.2815048= NT_167246.1:g.2815048G>A NT_167246.1:g.2815048G>C
MICB transcript variant 2 NM_001289160.2:c.-26-1271= NM_001289160.2:c.-26-1271G>A NM_001289160.2:c.-26-1271G>C
MICB transcript variant 3 NM_001289161.2:c.71-1271= NM_001289161.2:c.71-1271G>A NM_001289161.2:c.71-1271G>C
MICB transcript NM_005931.3:c.71-1271= NM_005931.3:c.71-1271G>A NM_005931.3:c.71-1271G>C
MICB transcript variant 1 NM_005931.5:c.71-1271= NM_005931.5:c.71-1271G>A NM_005931.5:c.71-1271G>C
MICB transcript variant X1 XM_005249125.1:c.-26-1271= XM_005249125.1:c.-26-1271G>A XM_005249125.1:c.-26-1271G>C
MICB transcript variant X2 XM_005249126.1:c.71-1271= XM_005249126.1:c.71-1271G>A XM_005249126.1:c.71-1271G>C
MICB transcript variant X1 XM_005272818.1:c.-26-1271A>G XM_005272818.1:c.-26-1271= XM_005272818.1:c.-26-1271A>C
MICB transcript variant X2 XM_005272819.1:c.71-1271A>G XM_005272819.1:c.71-1271= XM_005272819.1:c.71-1271A>C
MICB transcript variant X1 XM_005274863.1:c.-26-1271= XM_005274863.1:c.-26-1271G>A XM_005274863.1:c.-26-1271G>C
MICB transcript variant X2 XM_005274864.1:c.71-1271= XM_005274864.1:c.71-1271G>A XM_005274864.1:c.71-1271G>C
MICB transcript variant X1 XM_005274975.1:c.-26-1259= XM_005274975.1:c.-26-1259G>A XM_005274975.1:c.-26-1259G>C
MICB transcript variant X2 XM_005274976.1:c.71-1259= XM_005274976.1:c.71-1259G>A XM_005274976.1:c.71-1259G>C
MICB transcript variant X1 XM_005275250.1:c.-26-1271A>G XM_005275250.1:c.-26-1271= XM_005275250.1:c.-26-1271A>C
MICB transcript variant X2 XM_005275251.1:c.71-1271A>G XM_005275251.1:c.71-1271= XM_005275251.1:c.71-1271A>C
MICB transcript variant X1 XM_005275408.1:c.-26-1271= XM_005275408.1:c.-26-1271G>A XM_005275408.1:c.-26-1271G>C
MICB transcript variant X2 XM_005275409.1:c.71-1271= XM_005275409.1:c.71-1271G>A XM_005275409.1:c.71-1271G>C
MICB transcript variant X1 XM_005275556.1:c.-26-1271= XM_005275556.1:c.-26-1271G>A XM_005275556.1:c.-26-1271G>C
MICB transcript variant X2 XM_005275557.1:c.71-1271= XM_005275557.1:c.71-1271G>A XM_005275557.1:c.71-1271G>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

65 SubSNP, 17 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss3553044 Sep 28, 2001 (100)
2 BCM_SSAHASNP ss10289606 Jul 11, 2003 (126)
3 SI_MHC_SNP ss12691251 Oct 31, 2003 (126)
4 SC_SNP ss12859666 Dec 05, 2003 (126)
5 SC_SNP ss15751310 Feb 27, 2004 (126)
6 CSHL-HAPMAP ss17104426 Feb 27, 2004 (126)
7 CSHL-HAPMAP ss17875432 Feb 27, 2004 (126)
8 CSHL-HAPMAP ss19656775 Feb 27, 2004 (126)
9 SSAHASNP ss22405109 Apr 05, 2004 (126)
10 ABI ss42826472 Mar 11, 2006 (126)
11 ILLUMINA-UK ss116394270 Dec 01, 2009 (131)
12 GMI ss156746233 Dec 01, 2009 (131)
13 COMPLETE_GENOMICS ss162197735 Jul 04, 2010 (132)
14 BUSHMAN ss201625018 Jul 04, 2010 (135)
15 1000GENOMES ss222303852 Jul 14, 2010 (132)
16 1000GENOMES ss233398891 Jul 14, 2010 (132)
17 1000GENOMES ss240469627 Jul 15, 2010 (132)
18 BL ss254186426 May 09, 2011 (137)
19 GMI ss278726679 May 04, 2012 (137)
20 PJP ss293825761 May 09, 2011 (137)
21 TISHKOFF ss559113902 Apr 25, 2013 (138)
22 SSMP ss653035070 Apr 25, 2013 (138)
23 EVA-GONL ss982765628 Aug 21, 2014 (142)
24 1000GENOMES ss1319556973 Aug 21, 2014 (142)
25 HAMMER_LAB ss1397449845 Sep 08, 2015 (146)
26 EVA_DECODE ss1592309529 Apr 01, 2015 (144)
27 EVA_UK10K_ALSPAC ss1615276767 Apr 01, 2015 (144)
28 EVA_UK10K_TWINSUK ss1658270800 Apr 01, 2015 (144)
29 HAMMER_LAB ss1804357999 Sep 08, 2015 (146)
30 WEILL_CORNELL_DGM ss1926018078 Feb 12, 2016 (147)
31 JJLAB ss2023642064 Sep 14, 2016 (149)
32 USC_VALOUEV ss2151808454 Dec 20, 2016 (150)
33 SYSTEMSBIOZJU ss2626308415 Nov 08, 2017 (151)
34 GRF ss2707402251 Nov 08, 2017 (151)
35 SWEGEN ss2998795398 Nov 08, 2017 (151)
36 BIOINF_KMB_FNS_UNIBA ss3025608166 Nov 08, 2017 (151)
37 EVA_DECODE ss3716907970 Jul 13, 2019 (153)
38 ACPOP ss3733361384 Jul 13, 2019 (153)
39 EVA ss3764822103 Jul 13, 2019 (153)
40 PACBIO ss3785425485 Jul 13, 2019 (153)
41 PACBIO ss3790784926 Jul 13, 2019 (153)
42 PACBIO ss3795662442 Jul 13, 2019 (153)
43 KHV_HUMAN_GENOMES ss3807977496 Jul 13, 2019 (153)
44 EVA ss3829832588 Apr 26, 2020 (154)
45 EVA ss3838394581 Apr 26, 2020 (154)
46 EVA ss3843836757 Apr 26, 2020 (154)
47 SGDP_PRJ ss3864254438 Apr 26, 2020 (154)
48 KRGDB ss3911029215 Apr 26, 2020 (154)
49 VINODS ss4025209201 Apr 26, 2021 (155)
50 VINODS ss4025229266 Apr 26, 2021 (155)
51 VINODS ss4025287514 Apr 26, 2021 (155)
52 TOPMED ss4698379568 Apr 26, 2021 (155)
53 TOMMO_GENOMICS ss5176835741 Apr 26, 2021 (155)
54 1000G_HIGH_COVERAGE ss5267935775 Oct 17, 2022 (156)
55 EVA ss5364720986 Oct 17, 2022 (156)
56 EVA ss5508428147 Oct 17, 2022 (156)
57 1000G_HIGH_COVERAGE ss5553591599 Oct 17, 2022 (156)
58 SANFORD_IMAGENETICS ss5640089068 Oct 17, 2022 (156)
59 TOMMO_GENOMICS ss5714690200 Oct 17, 2022 (156)
60 YY_MCH ss5807307230 Oct 17, 2022 (156)
61 EVA ss5842026498 Oct 17, 2022 (156)
62 EVA ss5855283740 Oct 17, 2022 (156)
63 EVA ss5883242902 Oct 17, 2022 (156)
64 EVA ss5968590831 Oct 17, 2022 (156)
65 EVA ss5980356554 Oct 17, 2022 (156)
66 1000Genomes NC_000006.11 - 31472123 Oct 12, 2018 (152)
67 1000Genomes_30x NC_000006.12 - 31504346 Oct 17, 2022 (156)
68 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 31472123 Oct 12, 2018 (152)
69 Genome-wide autozygosity in Daghestan NC_000006.10 - 31580102 Apr 26, 2020 (154)
70 gnomAD - Genomes NC_000006.12 - 31504346 Apr 26, 2021 (155)
71 Genome of the Netherlands Release 5 NC_000006.11 - 31472123 Apr 26, 2020 (154)
72 KOREAN population from KRGDB NC_000006.11 - 31472123 Apr 26, 2020 (154)
73 Northern Sweden NC_000006.11 - 31472123 Jul 13, 2019 (153)
74 Qatari NC_000006.11 - 31472123 Apr 26, 2020 (154)
75 SGDP_PRJ NC_000006.11 - 31472123 Apr 26, 2020 (154)
76 Siberian NC_000006.11 - 31472123 Apr 26, 2020 (154)
77 8.3KJPN NC_000006.11 - 31472123 Apr 26, 2021 (155)
78 14KJPN NC_000006.12 - 31504346 Oct 17, 2022 (156)
79 TopMed NC_000006.12 - 31504346 Apr 26, 2021 (155)
80 UK 10K study - Twins NC_000006.11 - 31472123 Oct 12, 2018 (152)
81 A Vietnamese Genetic Variation Database NC_000006.11 - 31472123 Jul 13, 2019 (153)
82 ALFA NC_000006.12 - 31504346 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs6910159 Mar 11, 2006 (126)
rs9267418 Sep 24, 2004 (123)
rs9378119 Feb 27, 2004 (120)
rs113881470 Sep 17, 2011 (135)
rs114005457 Oct 26, 2010 (133)
rs117043322 Aug 16, 2010 (132)
rs147519186 May 04, 2012 (137)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
424496, ss116394270, ss162197735, ss201625018, ss254186426, ss278726679, ss293825761, ss1397449845, ss1592309529 NC_000006.10:31580101:G:A NC_000006.12:31504345:G:A (self)
31324334, 17466180, 7764431, 18206609, 6646249, 8060008, 16271418, 4324808, 34805048, 17466180, 3873313, ss222303852, ss233398891, ss240469627, ss559113902, ss653035070, ss982765628, ss1319556973, ss1615276767, ss1658270800, ss1804357999, ss1926018078, ss2023642064, ss2151808454, ss2626308415, ss2707402251, ss2998795398, ss3733361384, ss3764822103, ss3785425485, ss3790784926, ss3795662442, ss3829832588, ss3838394581, ss3864254438, ss3911029215, ss5176835741, ss5364720986, ss5508428147, ss5640089068, ss5842026498, ss5968590831, ss5980356554 NC_000006.11:31472122:G:A NC_000006.12:31504345:G:A (self)
41117534, 221208569, 48527304, 535757126, 9760758873, ss3025608166, ss3716907970, ss3807977496, ss3843836757, ss4698379568, ss5267935775, ss5553591599, ss5714690200, ss5807307230, ss5855283740, ss5883242902 NC_000006.12:31504345:G:A NC_000006.12:31504345:G:A (self)
ss10289606, ss15751310, ss17104426, ss17875432, ss19656775, ss22405109 NT_007592.13:22326738:A:A NC_000006.12:31504345:G:A (self)
ss3553044, ss12691251, ss42826472, ss156746233 NT_007592.15:31412122:G:A NC_000006.12:31504345:G:A (self)
ss12859666 NT_033951.3:2918300:A:A NC_000006.12:31504345:G:A (self)
ss4025209201 NT_167245.2:2752145:G:A NC_000006.12:31504345:G:A (self)
ss4025229266 NT_167246.2:2809427:G:A NC_000006.12:31504345:G:A (self)
ss4025287514 NT_167249.2:2803627:G:A NC_000006.12:31504345:G:A (self)
9760758873 NC_000006.12:31504345:G:C NC_000006.12:31504345:G:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs2534660

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07