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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1985157

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr19:18402784 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C / T>G
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.423582 (112118/264690, TOPMED)
C=0.437954 (61282/139928, GnomAD)
C=0.37004 (16788/45368, ALFA) (+ 17 more)
C=0.25642 (7246/28258, 14KJPN)
C=0.25167 (4218/16760, 8.3KJPN)
C=0.4065 (2603/6404, 1000G_30x)
C=0.4004 (2005/5008, 1000G)
C=0.4400 (1971/4480, Estonian)
C=0.4076 (1571/3854, ALSPAC)
C=0.4002 (1484/3708, TWINSUK)
C=0.2000 (586/2930, KOREAN)
C=0.2238 (410/1832, Korea1K)
C=0.410 (409/998, GoNL)
T=0.490 (294/600, NorthernSweden)
T=0.336 (109/324, SGDP_PRJ)
C=0.375 (81/216, Qatari)
C=0.102 (22/216, Vietnamese)
C=0.42 (17/40, GENOME_DK)
C=0.26 (10/38, Ancient Sardinia)
T=0.42 (11/26, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
SSBP4 : Missense Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 45462 T=0.63006 A=0.00000, C=0.36994
European Sub 41892 T=0.62274 A=0.00000, C=0.37726
African Sub 1228 T=0.6474 A=0.0000, C=0.3526
African Others Sub 54 T=0.48 A=0.00, C=0.52
African American Sub 1174 T=0.6550 A=0.0000, C=0.3450
Asian Sub 118 T=0.932 A=0.000, C=0.068
East Asian Sub 96 T=0.92 A=0.00, C=0.08
Other Asian Sub 22 T=1.00 A=0.00, C=0.00
Latin American 1 Sub 80 T=0.91 A=0.00, C=0.09
Latin American 2 Sub 344 T=0.933 A=0.000, C=0.067
South Asian Sub 40 T=0.85 A=0.00, C=0.15
Other Sub 1760 T=0.6949 A=0.0000, C=0.3051


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.576418 C=0.423582
gnomAD - Genomes Global Study-wide 139928 T=0.562046 C=0.437954
gnomAD - Genomes European Sub 75824 T=0.58946 C=0.41054
gnomAD - Genomes African Sub 41892 T=0.44634 C=0.55366
gnomAD - Genomes American Sub 13634 T=0.65835 C=0.34165
gnomAD - Genomes Ashkenazi Jewish Sub 3320 T=0.7358 C=0.2642
gnomAD - Genomes East Asian Sub 3110 T=0.8289 C=0.1711
gnomAD - Genomes Other Sub 2148 T=0.5847 C=0.4153
Allele Frequency Aggregator Total Global 45368 T=0.62996 A=0.00000, C=0.37004
Allele Frequency Aggregator European Sub 41816 T=0.62263 A=0.00000, C=0.37737
Allele Frequency Aggregator Other Sub 1742 T=0.6952 A=0.0000, C=0.3048
Allele Frequency Aggregator African Sub 1228 T=0.6474 A=0.0000, C=0.3526
Allele Frequency Aggregator Latin American 2 Sub 344 T=0.933 A=0.000, C=0.067
Allele Frequency Aggregator Asian Sub 118 T=0.932 A=0.000, C=0.068
Allele Frequency Aggregator Latin American 1 Sub 80 T=0.91 A=0.00, C=0.09
Allele Frequency Aggregator South Asian Sub 40 T=0.85 A=0.00, C=0.15
14KJPN JAPANESE Study-wide 28258 T=0.74358 C=0.25642
8.3KJPN JAPANESE Study-wide 16760 T=0.74833 C=0.25167
1000Genomes_30x Global Study-wide 6404 T=0.5935 C=0.4065
1000Genomes_30x African Sub 1786 T=0.4048 C=0.5952
1000Genomes_30x Europe Sub 1266 T=0.6058 C=0.3942
1000Genomes_30x South Asian Sub 1202 T=0.5582 C=0.4418
1000Genomes_30x East Asian Sub 1170 T=0.8359 C=0.1641
1000Genomes_30x American Sub 980 T=0.676 C=0.324
1000Genomes Global Study-wide 5008 T=0.5996 C=0.4004
1000Genomes African Sub 1322 T=0.4062 C=0.5938
1000Genomes East Asian Sub 1008 T=0.8304 C=0.1696
1000Genomes Europe Sub 1006 T=0.6014 C=0.3986
1000Genomes South Asian Sub 978 T=0.573 C=0.427
1000Genomes American Sub 694 T=0.669 C=0.331
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.5600 C=0.4400
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.5924 C=0.4076
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.5998 C=0.4002
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.8000 C=0.2000, G=0.0000
Korean Genome Project KOREAN Study-wide 1832 T=0.7762 C=0.2238
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.590 C=0.410
Northern Sweden ACPOP Study-wide 600 T=0.490 C=0.510
SGDP_PRJ Global Study-wide 324 T=0.336 C=0.664
Qatari Global Study-wide 216 T=0.625 C=0.375
A Vietnamese Genetic Variation Database Global Study-wide 216 T=0.898 C=0.102
The Danish reference pan genome Danish Study-wide 40 T=0.57 C=0.42
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 38 T=0.74 C=0.26
Siberian Global Study-wide 26 T=0.42 C=0.58
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 19 NC_000019.10:g.18402784T>A
GRCh38.p14 chr 19 NC_000019.10:g.18402784T>C
GRCh38.p14 chr 19 NC_000019.10:g.18402784T>G
GRCh37.p13 chr 19 NC_000019.9:g.18513594T>A
GRCh37.p13 chr 19 NC_000019.9:g.18513594T>C
GRCh37.p13 chr 19 NC_000019.9:g.18513594T>G
Gene: SSBP4, single stranded DNA binding protein 4 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
SSBP4 transcript variant 2 NM_001009998.4:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant 1 NM_032627.5:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X9 XM_005259790.4:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X1 XM_006722665.5:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X4 XM_006722666.3:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X8 XM_006722668.3:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X10 XM_017026437.2:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X2 XM_047438365.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X3 XM_047438366.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X5 XM_047438367.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X7 XM_047438369.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X12 XM_047438371.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X13 XM_047438372.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X14 XM_047438373.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X15 XM_047438374.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X17 XM_047438375.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X18 XM_047438376.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X19 XM_047438377.1:c. N/A Genic Upstream Transcript Variant
SSBP4 transcript variant X6 XM_047438368.1:c.32T>A L [CTC] > H [CAC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X6 XP_047294324.1:p.Leu11His L (Leu) > H (His) Missense Variant
SSBP4 transcript variant X6 XM_047438368.1:c.32T>C L [CTC] > P [CCC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X6 XP_047294324.1:p.Leu11Pro L (Leu) > P (Pro) Missense Variant
SSBP4 transcript variant X6 XM_047438368.1:c.32T>G L [CTC] > R [CGC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X6 XP_047294324.1:p.Leu11Arg L (Leu) > R (Arg) Missense Variant
SSBP4 transcript variant X11 XM_047438370.1:c.32T>A L [CTC] > H [CAC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X11 XP_047294326.1:p.Leu11His L (Leu) > H (His) Missense Variant
SSBP4 transcript variant X11 XM_047438370.1:c.32T>C L [CTC] > P [CCC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X11 XP_047294326.1:p.Leu11Pro L (Leu) > P (Pro) Missense Variant
SSBP4 transcript variant X11 XM_047438370.1:c.32T>G L [CTC] > R [CGC] Coding Sequence Variant
single-stranded DNA-binding protein 4 isoform X11 XP_047294326.1:p.Leu11Arg L (Leu) > R (Arg) Missense Variant
SSBP4 transcript variant X16 XR_936164.4:n. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C G
GRCh38.p14 chr 19 NC_000019.10:g.18402784= NC_000019.10:g.18402784T>A NC_000019.10:g.18402784T>C NC_000019.10:g.18402784T>G
GRCh37.p13 chr 19 NC_000019.9:g.18513594= NC_000019.9:g.18513594T>A NC_000019.9:g.18513594T>C NC_000019.9:g.18513594T>G
SSBP4 transcript variant X6 XM_047438368.1:c.32= XM_047438368.1:c.32T>A XM_047438368.1:c.32T>C XM_047438368.1:c.32T>G
SSBP4 transcript variant X11 XM_047438370.1:c.32= XM_047438370.1:c.32T>A XM_047438370.1:c.32T>C XM_047438370.1:c.32T>G
single-stranded DNA-binding protein 4 isoform X6 XP_047294324.1:p.Leu11= XP_047294324.1:p.Leu11His XP_047294324.1:p.Leu11Pro XP_047294324.1:p.Leu11Arg
single-stranded DNA-binding protein 4 isoform X11 XP_047294326.1:p.Leu11= XP_047294326.1:p.Leu11His XP_047294326.1:p.Leu11Pro XP_047294326.1:p.Leu11Arg
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

80 SubSNP, 20 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss2893079 Jan 12, 2001 (92)
2 BCM_SSAHASNP ss10922864 Jul 11, 2003 (116)
3 WI_SSAHASNP ss12454052 Jul 11, 2003 (116)
4 SSAHASNP ss21525577 Apr 05, 2004 (121)
5 ABI ss40992423 Mar 14, 2006 (126)
6 HGSV ss85025336 Dec 15, 2007 (130)
7 HUMANGENOME_JCVI ss96294189 Feb 05, 2009 (130)
8 ILLUMINA-UK ss117656724 Dec 01, 2009 (131)
9 COMPLETE_GENOMICS ss167909074 Jul 04, 2010 (132)
10 COMPLETE_GENOMICS ss169252115 Jul 04, 2010 (132)
11 BUSHMAN ss203699336 Jul 04, 2010 (132)
12 BCM-HGSC-SUB ss208436023 Jul 04, 2010 (132)
13 BL ss255539515 May 09, 2011 (134)
14 GMI ss283145886 May 04, 2012 (137)
15 GMI ss287355571 Apr 25, 2013 (138)
16 PJP ss292222070 May 09, 2011 (134)
17 1000GENOMES ss340361704 May 09, 2011 (134)
18 ILLUMINA ss479722836 May 04, 2012 (137)
19 ILLUMINA ss483801711 May 04, 2012 (137)
20 ILLUMINA ss533225758 Sep 08, 2015 (146)
21 TISHKOFF ss565891660 Apr 25, 2013 (138)
22 SSMP ss661748447 Apr 25, 2013 (138)
23 ILLUMINA ss779639758 Sep 08, 2015 (146)
24 ILLUMINA ss781052396 Sep 08, 2015 (146)
25 ILLUMINA ss835112553 Sep 08, 2015 (146)
26 EVA-GONL ss994149682 Aug 21, 2014 (142)
27 JMKIDD_LAB ss1081798451 Aug 21, 2014 (142)
28 1000GENOMES ss1362592609 Aug 21, 2014 (142)
29 DDI ss1428354625 Apr 01, 2015 (144)
30 EVA_GENOME_DK ss1578580304 Apr 01, 2015 (144)
31 EVA_UK10K_ALSPAC ss1637678657 Apr 01, 2015 (144)
32 EVA_UK10K_TWINSUK ss1680672690 Apr 01, 2015 (144)
33 EVA_DECODE ss1698209200 Apr 01, 2015 (144)
34 HAMMER_LAB ss1809239037 Sep 08, 2015 (146)
35 WEILL_CORNELL_DGM ss1937637099 Feb 12, 2016 (147)
36 GENOMED ss1968615221 Jul 19, 2016 (147)
37 JJLAB ss2029591998 Sep 14, 2016 (149)
38 USC_VALOUEV ss2158120504 Dec 20, 2016 (150)
39 HUMAN_LONGEVITY ss2224770721 Dec 20, 2016 (150)
40 ILLUMINA ss2633525203 Nov 08, 2017 (151)
41 GRF ss2702724747 Nov 08, 2017 (151)
42 ILLUMINA ss2710878449 Nov 08, 2017 (151)
43 GNOMAD ss2961171528 Nov 08, 2017 (151)
44 AFFY ss2985136543 Nov 08, 2017 (151)
45 AFFY ss2985768839 Nov 08, 2017 (151)
46 SWEGEN ss3017207414 Nov 08, 2017 (151)
47 BIOINF_KMB_FNS_UNIBA ss3028628628 Nov 08, 2017 (151)
48 CSHL ss3352228378 Nov 08, 2017 (151)
49 ILLUMINA ss3627904017 Oct 12, 2018 (152)
50 ILLUMINA ss3631497689 Oct 12, 2018 (152)
51 ILLUMINA ss3642053463 Oct 12, 2018 (152)
52 URBANLAB ss3650881118 Oct 12, 2018 (152)
53 ILLUMINA ss3653908522 Oct 12, 2018 (152)
54 EGCUT_WGS ss3684027721 Jul 13, 2019 (153)
55 EVA_DECODE ss3702475413 Jul 13, 2019 (153)
56 ACPOP ss3742910252 Jul 13, 2019 (153)
57 EVA ss3755884212 Jul 13, 2019 (153)
58 PACBIO ss3788487230 Jul 13, 2019 (153)
59 PACBIO ss3793404057 Jul 13, 2019 (153)
60 PACBIO ss3798290818 Jul 13, 2019 (153)
61 KHV_HUMAN_GENOMES ss3821138653 Jul 13, 2019 (153)
62 EVA ss3835385868 Apr 27, 2020 (154)
63 SGDP_PRJ ss3887900314 Apr 27, 2020 (154)
64 KRGDB ss3937904945 Apr 27, 2020 (154)
65 KOGIC ss3980991452 Apr 27, 2020 (154)
66 EVA ss3985848590 Apr 26, 2021 (155)
67 TOPMED ss5069994131 Apr 26, 2021 (155)
68 TOMMO_GENOMICS ss5227054926 Apr 26, 2021 (155)
69 1000G_HIGH_COVERAGE ss5306725172 Oct 16, 2022 (156)
70 EVA ss5315966285 Oct 16, 2022 (156)
71 EVA ss5433949043 Oct 16, 2022 (156)
72 HUGCELL_USP ss5499322369 Oct 16, 2022 (156)
73 1000G_HIGH_COVERAGE ss5612212789 Oct 16, 2022 (156)
74 SANFORD_IMAGENETICS ss5662101344 Oct 16, 2022 (156)
75 TOMMO_GENOMICS ss5785445059 Oct 16, 2022 (156)
76 YY_MCH ss5817463099 Oct 16, 2022 (156)
77 EVA ss5840344169 Oct 16, 2022 (156)
78 EVA ss5852229763 Oct 16, 2022 (156)
79 EVA ss5927538448 Oct 16, 2022 (156)
80 EVA ss5953518295 Oct 16, 2022 (156)
81 1000Genomes NC_000019.9 - 18513594 Oct 12, 2018 (152)
82 1000Genomes_30x NC_000019.10 - 18402784 Oct 16, 2022 (156)
83 The Avon Longitudinal Study of Parents and Children NC_000019.9 - 18513594 Oct 12, 2018 (152)
84 Genetic variation in the Estonian population NC_000019.9 - 18513594 Oct 12, 2018 (152)
85 The Danish reference pan genome NC_000019.9 - 18513594 Apr 27, 2020 (154)
86 gnomAD - Genomes NC_000019.10 - 18402784 Apr 26, 2021 (155)
87 Genome of the Netherlands Release 5 NC_000019.9 - 18513594 Apr 27, 2020 (154)
88 KOREAN population from KRGDB NC_000019.9 - 18513594 Apr 27, 2020 (154)
89 Korean Genome Project NC_000019.10 - 18402784 Apr 27, 2020 (154)
90 Northern Sweden NC_000019.9 - 18513594 Jul 13, 2019 (153)
91 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000019.9 - 18513594 Apr 26, 2021 (155)
92 Qatari NC_000019.9 - 18513594 Apr 27, 2020 (154)
93 SGDP_PRJ NC_000019.9 - 18513594 Apr 27, 2020 (154)
94 Siberian NC_000019.9 - 18513594 Apr 27, 2020 (154)
95 8.3KJPN NC_000019.9 - 18513594 Apr 26, 2021 (155)
96 14KJPN NC_000019.10 - 18402784 Oct 16, 2022 (156)
97 TopMed NC_000019.10 - 18402784 Apr 26, 2021 (155)
98 UK 10K study - Twins NC_000019.9 - 18513594 Oct 12, 2018 (152)
99 A Vietnamese Genetic Variation Database NC_000019.9 - 18513594 Jul 13, 2019 (153)
100 ALFA NC_000019.10 - 18402784 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58949648 May 25, 2008 (130)
rs386428229 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
11868888336 NC_000019.10:18402783:T:A NC_000019.10:18402783:T:A (self)
ss85025336, ss117656724, ss167909074, ss169252115, ss203699336, ss208436023, ss255539515, ss283145886, ss287355571, ss292222070, ss483801711, ss1698209200 NC_000019.8:18374593:T:C NC_000019.10:18402783:T:C (self)
75979598, 42089140, 29765969, 4765057, 18750305, 45082339, 16195117, 1074517, 19679021, 39917294, 10636858, 85024233, 42089140, 9301084, ss340361704, ss479722836, ss533225758, ss565891660, ss661748447, ss779639758, ss781052396, ss835112553, ss994149682, ss1081798451, ss1362592609, ss1428354625, ss1578580304, ss1637678657, ss1680672690, ss1809239037, ss1937637099, ss1968615221, ss2029591998, ss2158120504, ss2633525203, ss2702724747, ss2710878449, ss2961171528, ss2985136543, ss2985768839, ss3017207414, ss3352228378, ss3627904017, ss3631497689, ss3642053463, ss3653908522, ss3684027721, ss3742910252, ss3755884212, ss3788487230, ss3793404057, ss3798290818, ss3835385868, ss3887900314, ss3937904945, ss3985848590, ss5227054926, ss5315966285, ss5433949043, ss5662101344, ss5840344169, ss5953518295 NC_000019.9:18513593:T:C NC_000019.10:18402783:T:C (self)
99738724, 535866177, 37369453, 119282163, 285539795, 11868888336, ss2224770721, ss3028628628, ss3650881118, ss3702475413, ss3821138653, ss3980991452, ss5069994131, ss5306725172, ss5499322369, ss5612212789, ss5785445059, ss5817463099, ss5852229763, ss5927538448 NC_000019.10:18402783:T:C NC_000019.10:18402783:T:C (self)
ss10922864, ss12454052, ss21525577 NT_011295.10:9776395:T:C NC_000019.10:18402783:T:C (self)
ss2893079, ss40992423, ss96294189 NT_011295.11:9776395:T:C NC_000019.10:18402783:T:C (self)
45082339, ss3937904945 NC_000019.9:18513593:T:G NC_000019.10:18402783:T:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs1985157
PMID Title Author Year Journal
35124268 Mendelian Randomization Analysis Reveals No Causal Relationship Between Nonalcoholic Fatty Liver Disease and Severe COVID-19. Li J et al. 2022 Clinical gastroenterology and hepatology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07