Name: rs1879265
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1879265

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr17:40075123 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: A>G / A>T
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.389017 (102969/264690, TOPMED)
A=0.385042 (53959/140138, GnomAD)
A=0.299501 (41058/137088, ALFA) (+ 17 more)
G=0.44617 (12608/28258, 14KJPN)
G=0.44648 (7483/16760, 8.3KJPN)
A=0.4368 (2797/6404, 1000G_30x)
A=0.4427 (2217/5008, 1000G)
A=0.3040 (1362/4480, Estonian)
A=0.2597 (1001/3854, ALSPAC)
A=0.2654 (984/3708, TWINSUK)
G=0.3908 (1145/2930, KOREAN)
A=0.4756 (896/1884, HapMap)
G=0.3794 (695/1832, Korea1K)
A=0.262 (261/998, GoNL)
A=0.255 (153/600, NorthernSweden)
A=0.287 (123/428, SGDP_PRJ)
A=0.389 (84/216, Qatari)
G=0.406 (86/212, Vietnamese)
A=0.24 (11/46, Siberian)
A=0.28 (11/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: THRA : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	137088	A=0.299501	G=0.700499, T=0.000000
European	Sub	119520	A=0.281886	G=0.718114, T=0.000000
African	Sub	4734	A=0.6377	G=0.3623, T=0.0000
African Others	Sub	162	A=0.642	G=0.358, T=0.000
African American	Sub	4572	A=0.6376	G=0.3624, T=0.0000
Asian	Sub	562	A=0.662	G=0.338, T=0.000
East Asian	Sub	442	A=0.654	G=0.346, T=0.000
Other Asian	Sub	120	A=0.692	G=0.308, T=0.000
Latin American 1	Sub	624	A=0.388	G=0.612, T=0.000
Latin American 2	Sub	5772	A=0.3039	G=0.6961, T=0.0000
South Asian	Sub	100	A=0.33	G=0.67, T=0.00
Other	Sub	5776	A=0.3371	G=0.6629, T=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	A=0.389017	G=0.610983
gnomAD - Genomes	Global	Study-wide	140138	A=0.385042	G=0.614958
gnomAD - Genomes	European	Sub	75880	A=0.29369	G=0.70631
gnomAD - Genomes	African	Sub	41998	A=0.56100	G=0.43900
gnomAD - Genomes	American	Sub	13652	A=0.31827	G=0.68173
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	A=0.2999	G=0.7001
gnomAD - Genomes	East Asian	Sub	3132	A=0.6363	G=0.3637
gnomAD - Genomes	Other	Sub	2152	A=0.3615	G=0.6385
Allele Frequency Aggregator	Total	Global	137088	A=0.299501	G=0.700499, T=0.000000
Allele Frequency Aggregator	European	Sub	119520	A=0.281886	G=0.718114, T=0.000000
Allele Frequency Aggregator	Other	Sub	5776	A=0.3371	G=0.6629, T=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	5772	A=0.3039	G=0.6961, T=0.0000
Allele Frequency Aggregator	African	Sub	4734	A=0.6377	G=0.3623, T=0.0000
Allele Frequency Aggregator	Latin American 1	Sub	624	A=0.388	G=0.612, T=0.000
Allele Frequency Aggregator	Asian	Sub	562	A=0.662	G=0.338, T=0.000
Allele Frequency Aggregator	South Asian	Sub	100	A=0.33	G=0.67, T=0.00
14KJPN	JAPANESE	Study-wide	28258	A=0.55383	G=0.44617
8.3KJPN	JAPANESE	Study-wide	16760	A=0.55352	G=0.44648
1000Genomes_30x	Global	Study-wide	6404	A=0.4368	G=0.5632
1000Genomes_30x	African	Sub	1786	A=0.5806	G=0.4194
1000Genomes_30x	Europe	Sub	1266	A=0.2701	G=0.7299
1000Genomes_30x	South Asian	Sub	1202	A=0.3311	G=0.6689
1000Genomes_30x	East Asian	Sub	1170	A=0.6017	G=0.3983
1000Genomes_30x	American	Sub	980	A=0.322	G=0.678
1000Genomes	Global	Study-wide	5008	A=0.4427	G=0.5573
1000Genomes	African	Sub	1322	A=0.5840	G=0.4160
1000Genomes	East Asian	Sub	1008	A=0.5962	G=0.4038
1000Genomes	Europe	Sub	1006	A=0.2883	G=0.7117
1000Genomes	South Asian	Sub	978	A=0.334	G=0.666
1000Genomes	American	Sub	694	A=0.327	G=0.673
Genetic variation in the Estonian population	Estonian	Study-wide	4480	A=0.3040	G=0.6960
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	A=0.2597	G=0.7403
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	A=0.2654	G=0.7346
KOREAN population from KRGDB	KOREAN	Study-wide	2930	A=0.6092	G=0.3908
HapMap	Global	Study-wide	1884	A=0.4756	G=0.5244
HapMap	American	Sub	766	A=0.396	G=0.604
HapMap	African	Sub	690	A=0.594	G=0.406
HapMap	Asian	Sub	254	A=0.547	G=0.453
HapMap	Europe	Sub	174	A=0.253	G=0.747
Korean Genome Project	KOREAN	Study-wide	1832	A=0.6206	G=0.3794
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	A=0.262	G=0.738
Northern Sweden	ACPOP	Study-wide	600	A=0.255	G=0.745
SGDP_PRJ	Global	Study-wide	428	A=0.287	G=0.713
Qatari	Global	Study-wide	216	A=0.389	G=0.611
A Vietnamese Genetic Variation Database	Global	Study-wide	212	A=0.594	G=0.406
Siberian	Global	Study-wide	46	A=0.24	G=0.76
The Danish reference pan genome	Danish	Study-wide	40	A=0.28	G=0.72

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 17	NC_000017.11:g.40075123A>G
GRCh38.p14 chr 17	NC_000017.11:g.40075123A>T
GRCh37.p13 chr 17	NC_000017.10:g.38231376A>G
GRCh37.p13 chr 17	NC_000017.10:g.38231376A>T
THRA RefSeqGene	NG_023345.1:g.17931A>G
THRA RefSeqGene	NG_023345.1:g.17931A>T

Gene: THRA, thyroid hormone receptor alpha (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
THRA transcript variant 3	NM_001190918.2:c.53+582A>G	N/A	Intron Variant
THRA transcript variant 4	NM_001190919.2:c.53+582A>G	N/A	Intron Variant
THRA transcript variant 2	NM_003250.6:c.53+582A>G	N/A	Intron Variant
THRA transcript variant 1	NM_199334.5:c.53+582A>G	N/A	Intron Variant
THRA transcript variant X1	XM_047436632.1:c.53+582A>G	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	A=	G	T
GRCh38.p14 chr 17	NC_000017.11:g.40075123=	NC_000017.11:g.40075123A>G	NC_000017.11:g.40075123A>T
GRCh37.p13 chr 17	NC_000017.10:g.38231376=	NC_000017.10:g.38231376A>G	NC_000017.10:g.38231376A>T
THRA RefSeqGene	NG_023345.1:g.17931=	NG_023345.1:g.17931A>G	NG_023345.1:g.17931A>T
THRA transcript variant 3	NM_001190918.1:c.53+582=	NM_001190918.1:c.53+582A>G	NM_001190918.1:c.53+582A>T
THRA transcript variant 3	NM_001190918.2:c.53+582=	NM_001190918.2:c.53+582A>G	NM_001190918.2:c.53+582A>T
THRA transcript variant 4	NM_001190919.1:c.53+582=	NM_001190919.1:c.53+582A>G	NM_001190919.1:c.53+582A>T
THRA transcript variant 4	NM_001190919.2:c.53+582=	NM_001190919.2:c.53+582A>G	NM_001190919.2:c.53+582A>T
THRA transcript variant 2	NM_003250.5:c.53+582=	NM_003250.5:c.53+582A>G	NM_003250.5:c.53+582A>T
THRA transcript variant 2	NM_003250.6:c.53+582=	NM_003250.6:c.53+582A>G	NM_003250.6:c.53+582A>T
THRA transcript variant 1	NM_199334.3:c.53+582=	NM_199334.3:c.53+582A>G	NM_199334.3:c.53+582A>T
THRA transcript variant 1	NM_199334.5:c.53+582=	NM_199334.5:c.53+582A>G	NM_199334.5:c.53+582A>T
THRA transcript variant X1	XM_047436632.1:c.53+582=	XM_047436632.1:c.53+582A>G	XM_047436632.1:c.53+582A>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

113 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	TSC-CSHL	ss2757372	Jan 12, 2001 (92)
2	BCM_SSAHASNP	ss10857726	Jul 11, 2003 (116)
3	CSHL-HAPMAP	ss16752774	Feb 27, 2004 (120)
4	SSAHASNP	ss21428742	Apr 05, 2004 (121)
5	PERLEGEN	ss24076520	Sep 20, 2004 (123)
6	ABI	ss43983988	Mar 14, 2006 (126)
7	ILLUMINA	ss65790190	Oct 15, 2006 (127)
8	ILLUMINA	ss74878389	Dec 07, 2007 (129)
9	HGSV	ss84968012	Dec 15, 2007 (130)
10	BCMHGSC_JDW	ss90585391	Mar 24, 2008 (129)
11	HUMANGENOME_JCVI	ss96545280	Feb 05, 2009 (130)
12	BGI	ss103345222	Dec 01, 2009 (131)
13	1000GENOMES	ss109757679	Jan 24, 2009 (130)
14	1000GENOMES	ss113522065	Jan 25, 2009 (130)
15	KRIBB_YJKIM	ss119406657	Dec 01, 2009 (131)
16	ENSEMBL	ss136572186	Dec 01, 2009 (131)
17	ENSEMBL	ss137065691	Dec 01, 2009 (131)
18	GMI	ss158021802	Dec 01, 2009 (131)
19	ILLUMINA	ss160470895	Dec 01, 2009 (131)
20	COMPLETE_GENOMICS	ss168126072	Jul 04, 2010 (132)
21	COMPLETE_GENOMICS	ss169583778	Jul 04, 2010 (132)
22	COMPLETE_GENOMICS	ss171376494	Jul 04, 2010 (132)
23	ILLUMINA	ss172961609	Jul 04, 2010 (132)
24	BUSHMAN	ss202497552	Jul 04, 2010 (132)
25	BCM-HGSC-SUB	ss207887773	Jul 04, 2010 (132)
26	1000GENOMES	ss227541952	Jul 14, 2010 (132)
27	1000GENOMES	ss237239051	Jul 15, 2010 (132)
28	1000GENOMES	ss243538720	Jul 15, 2010 (132)
29	GMI	ss282760835	May 04, 2012 (137)
30	GMI	ss287178639	Apr 25, 2013 (138)
31	PJP	ss292048321	May 09, 2011 (134)
32	ILLUMINA	ss480325329	May 04, 2012 (137)
33	ILLUMINA	ss480336837	May 04, 2012 (137)
34	ILLUMINA	ss481099156	Sep 08, 2015 (146)
35	ILLUMINA	ss484960338	May 04, 2012 (137)
36	ILLUMINA	ss537001682	Sep 08, 2015 (146)
37	TISHKOFF	ss565263983	Apr 25, 2013 (138)
38	SSMP	ss661065924	Apr 25, 2013 (138)
39	ILLUMINA	ss778844108	Sep 08, 2015 (146)
40	ILLUMINA	ss782926479	Sep 08, 2015 (146)
41	ILLUMINA	ss783889362	Sep 08, 2015 (146)
42	ILLUMINA	ss832181782	Sep 08, 2015 (146)
43	ILLUMINA	ss834304694	Sep 08, 2015 (146)
44	EVA-GONL	ss993092169	Aug 21, 2014 (142)
45	JMKIDD_LAB	ss1081048202	Aug 21, 2014 (142)
46	1000GENOMES	ss1358588064	Aug 21, 2014 (142)
47	DDI	ss1428029386	Apr 01, 2015 (144)
48	EVA_GENOME_DK	ss1578151595	Apr 01, 2015 (144)
49	EVA_UK10K_ALSPAC	ss1635619787	Apr 01, 2015 (144)
50	EVA_UK10K_TWINSUK	ss1678613820	Apr 01, 2015 (144)
51	EVA_DECODE	ss1697134282	Apr 01, 2015 (144)
52	EVA_SVP	ss1713581505	Apr 01, 2015 (144)
53	ILLUMINA	ss1752224364	Sep 08, 2015 (146)
54	WEILL_CORNELL_DGM	ss1936551726	Feb 12, 2016 (147)
55	GENOMED	ss1968387106	Jul 19, 2016 (147)
56	JJLAB	ss2029053661	Sep 14, 2016 (149)
57	ILLUMINA	ss2094895135	Dec 20, 2016 (150)
58	ILLUMINA	ss2095074320	Dec 20, 2016 (150)
59	USC_VALOUEV	ss2157522506	Dec 20, 2016 (150)
60	HUMAN_LONGEVITY	ss2216711783	Dec 20, 2016 (150)
61	SYSTEMSBIOZJU	ss2629022611	Nov 08, 2017 (151)
62	ILLUMINA	ss2633394995	Nov 08, 2017 (151)
63	GRF	ss2702083849	Nov 08, 2017 (151)
64	GNOMAD	ss2949677142	Nov 08, 2017 (151)
65	SWEGEN	ss3015506669	Nov 08, 2017 (151)
66	BIOINF_KMB_FNS_UNIBA	ss3028347175	Nov 08, 2017 (151)
67	CSHL	ss3351739580	Nov 08, 2017 (151)
68	ILLUMINA	ss3627665223	Oct 12, 2018 (152)
69	ILLUMINA	ss3631376247	Oct 12, 2018 (152)
70	ILLUMINA	ss3633141051	Oct 12, 2018 (152)
71	ILLUMINA	ss3633848531	Oct 12, 2018 (152)
72	ILLUMINA	ss3634674014	Oct 12, 2018 (152)
73	ILLUMINA	ss3635536306	Oct 12, 2018 (152)
74	ILLUMINA	ss3636364156	Oct 12, 2018 (152)
75	ILLUMINA	ss3637287847	Oct 12, 2018 (152)
76	ILLUMINA	ss3638160146	Oct 12, 2018 (152)
77	ILLUMINA	ss3640381327	Oct 12, 2018 (152)
78	ILLUMINA	ss3641080676	Oct 12, 2018 (152)
79	ILLUMINA	ss3641376163	Oct 12, 2018 (152)
80	ILLUMINA	ss3643138707	Oct 12, 2018 (152)
81	URBANLAB	ss3650651106	Oct 12, 2018 (152)
82	ILLUMINA	ss3652193304	Oct 12, 2018 (152)
83	EGCUT_WGS	ss3682397703	Jul 13, 2019 (153)
84	EVA_DECODE	ss3700433309	Jul 13, 2019 (153)
85	ACPOP	ss3742012611	Jul 13, 2019 (153)
86	ILLUMINA	ss3744974314	Jul 13, 2019 (153)
87	EVA	ss3754647977	Jul 13, 2019 (153)
88	ILLUMINA	ss3772472213	Jul 13, 2019 (153)
89	PACBIO	ss3788198786	Jul 13, 2019 (153)
90	PACBIO	ss3793157211	Jul 13, 2019 (153)
91	PACBIO	ss3798043081	Jul 13, 2019 (153)
92	KHV_HUMAN_GENOMES	ss3819919081	Jul 13, 2019 (153)
93	EVA	ss3834859611	Apr 27, 2020 (154)
94	EVA	ss3841039792	Apr 27, 2020 (154)
95	EVA	ss3846536496	Apr 27, 2020 (154)
96	SGDP_PRJ	ss3885716542	Apr 27, 2020 (154)
97	KRGDB	ss3935393168	Apr 27, 2020 (154)
98	KOGIC	ss3978812893	Apr 27, 2020 (154)
99	TOPMED	ss5035404813	Apr 26, 2021 (155)
100	TOMMO_GENOMICS	ss5222335485	Apr 26, 2021 (155)
101	1000G_HIGH_COVERAGE	ss5303074190	Oct 16, 2022 (156)
102	EVA	ss5315885742	Oct 16, 2022 (156)
103	EVA	ss5427489925	Oct 16, 2022 (156)
104	HUGCELL_USP	ss5496137854	Oct 16, 2022 (156)
105	1000G_HIGH_COVERAGE	ss5606766488	Oct 16, 2022 (156)
106	SANFORD_IMAGENETICS	ss5660071365	Oct 16, 2022 (156)
107	TOMMO_GENOMICS	ss5778517036	Oct 16, 2022 (156)
108	EVA	ss5799975236	Oct 16, 2022 (156)
109	YY_MCH	ss5816529555	Oct 16, 2022 (156)
110	EVA	ss5833960653	Oct 16, 2022 (156)
111	EVA	ss5851802655	Oct 16, 2022 (156)
112	EVA	ss5913892920	Oct 16, 2022 (156)
113	EVA	ss5951464880	Oct 16, 2022 (156)
114	1000Genomes	NC_000017.10 - 38231376	Oct 12, 2018 (152)
115	1000Genomes_30x	NC_000017.11 - 40075123	Oct 16, 2022 (156)
116	The Avon Longitudinal Study of Parents and Children	NC_000017.10 - 38231376	Oct 12, 2018 (152)
117	Genetic variation in the Estonian population	NC_000017.10 - 38231376	Oct 12, 2018 (152)
118	The Danish reference pan genome	NC_000017.10 - 38231376	Apr 27, 2020 (154)
119	gnomAD - Genomes	NC_000017.11 - 40075123	Apr 26, 2021 (155)
120	Genome of the Netherlands Release 5	NC_000017.10 - 38231376	Apr 27, 2020 (154)
121	HapMap	NC_000017.11 - 40075123	Apr 27, 2020 (154)
122	KOREAN population from KRGDB	NC_000017.10 - 38231376	Apr 27, 2020 (154)
123	Korean Genome Project	NC_000017.11 - 40075123	Apr 27, 2020 (154)
124	Northern Sweden	NC_000017.10 - 38231376	Jul 13, 2019 (153)
125	Qatari	NC_000017.10 - 38231376	Apr 27, 2020 (154)
126	SGDP_PRJ	NC_000017.10 - 38231376	Apr 27, 2020 (154)
127	Siberian	NC_000017.10 - 38231376	Apr 27, 2020 (154)
128	8.3KJPN	NC_000017.10 - 38231376	Apr 26, 2021 (155)
129	14KJPN	NC_000017.11 - 40075123	Oct 16, 2022 (156)
130	TopMed	NC_000017.11 - 40075123	Apr 26, 2021 (155)
131	UK 10K study - Twins	NC_000017.10 - 38231376	Oct 12, 2018 (152)
132	A Vietnamese Genetic Variation Database	NC_000017.10 - 38231376	Jul 13, 2019 (153)
133	ALFA	NC_000017.11 - 40075123	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59602474	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss84968012, ss90585391, ss109757679, ss113522065, ss168126072, ss169583778, ss171376494, ss202497552, ss207887773, ss282760835, ss287178639, ss292048321, ss480325329, ss1697134282, ss1713581505, ss2094895135, ss3643138707	NC_000017.9:35484901:A:G	NC_000017.11:40075122:A:G	(self)
71827389, 39811903, 28135951, 4354230, 17745111, 42570562, 15297476, 18593648, 37733522, 10038860, 80304792, 39811903, 8811359, ss227541952, ss237239051, ss243538720, ss480336837, ss481099156, ss484960338, ss537001682, ss565263983, ss661065924, ss778844108, ss782926479, ss783889362, ss832181782, ss834304694, ss993092169, ss1081048202, ss1358588064, ss1428029386, ss1578151595, ss1635619787, ss1678613820, ss1752224364, ss1936551726, ss1968387106, ss2029053661, ss2095074320, ss2157522506, ss2629022611, ss2633394995, ss2702083849, ss2949677142, ss3015506669, ss3351739580, ss3627665223, ss3631376247, ss3633141051, ss3633848531, ss3634674014, ss3635536306, ss3636364156, ss3637287847, ss3638160146, ss3640381327, ss3641080676, ss3641376163, ss3652193304, ss3682397703, ss3742012611, ss3744974314, ss3754647977, ss3772472213, ss3788198786, ss3793157211, ss3798043081, ss3834859611, ss3841039792, ss3885716542, ss3935393168, ss5222335485, ss5315885742, ss5427489925, ss5660071365, ss5799975236, ss5833960653, ss5951464880	NC_000017.10:38231375:A:G	NC_000017.11:40075122:A:G	(self)
94292423, 506749574, 1485791, 35190894, 112354140, 250950475, 2030697361, ss2216711783, ss3028347175, ss3650651106, ss3700433309, ss3819919081, ss3846536496, ss3978812893, ss5035404813, ss5303074190, ss5496137854, ss5606766488, ss5778517036, ss5816529555, ss5851802655, ss5913892920	NC_000017.11:40075122:A:G	NC_000017.11:40075122:A:G	(self)
ss10857726	NT_010755.13:1955671:A:G	NC_000017.11:40075122:A:G	(self)
ss16752774, ss21428742	NT_010755.14:1955671:A:G	NC_000017.11:40075122:A:G	(self)
ss2757372, ss24076520, ss43983988, ss65790190, ss74878389, ss96545280, ss103345222, ss119406657, ss136572186, ss137065691, ss158021802, ss160470895, ss172961609	NT_010783.15:3505527:A:G	NC_000017.11:40075122:A:G	(self)
2030697361	NC_000017.11:40075122:A:T	NC_000017.11:40075122:A:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1879265

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1879265