Name: rs17176633
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs17176633

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr2:168068275 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>C
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.341475 (90385/264690, TOPMED)
C=0.411684 (104468/253758, ALFA)
C=0.359681 (50359/140010, GnomAD) (+ 21 more)
C=0.29354 (23097/78684, PAGE_STUDY)
C=0.23931 (6762/28256, 14KJPN)
C=0.23825 (3993/16760, 8.3KJPN)
C=0.3000 (1921/6404, 1000G_30x)
C=0.3007 (1506/5008, 1000G)
C=0.4949 (2217/4480, Estonian)
C=0.4289 (1653/3854, ALSPAC)
C=0.4175 (1548/3708, TWINSUK)
C=0.2324 (681/2930, KOREAN)
C=0.2102 (385/1832, Korea1K)
C=0.3333 (378/1134, Daghestan)
C=0.438 (437/998, GoNL)
C=0.250 (197/788, PRJEB37584)
C=0.450 (270/600, NorthernSweden)
C=0.268 (84/314, HapMap)
T=0.381 (102/268, SGDP_PRJ)
C=0.319 (69/216, Qatari)
C=0.407 (88/216, Vietnamese)
C=0.43 (32/74, Ancient Sardinia)
C=0.47 (19/40, GENOME_DK)
T=0.42 (11/26, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: STK39 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	258886	T=0.589375	C=0.410625
European	Sub	226810	T=0.574864	C=0.425136
African	Sub	10600	T=0.77868	C=0.22132
African Others	Sub	400	T=0.823	C=0.177
African American	Sub	10200	T=0.77696	C=0.22304
Asian	Sub	3862	T=0.7566	C=0.2434
East Asian	Sub	3130	T=0.7700	C=0.2300
Other Asian	Sub	732	T=0.699	C=0.301
Latin American 1	Sub	1028	T=0.6625	C=0.3375
Latin American 2	Sub	6592	T=0.6050	C=0.3950
South Asian	Sub	368	T=0.758	C=0.242
Other	Sub	9626	T=0.6308	C=0.3692

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.658525	C=0.341475
Allele Frequency Aggregator	Total	Global	253758	T=0.588316	C=0.411684
Allele Frequency Aggregator	European	Sub	223642	T=0.574704	C=0.425296
Allele Frequency Aggregator	African	Sub	9458	T=0.7789	C=0.2211
Allele Frequency Aggregator	Other	Sub	8808	T=0.6273	C=0.3727
Allele Frequency Aggregator	Latin American 2	Sub	6592	T=0.6050	C=0.3950
Allele Frequency Aggregator	Asian	Sub	3862	T=0.7566	C=0.2434
Allele Frequency Aggregator	Latin American 1	Sub	1028	T=0.6625	C=0.3375
Allele Frequency Aggregator	South Asian	Sub	368	T=0.758	C=0.242
gnomAD - Genomes	Global	Study-wide	140010	T=0.640319	C=0.359681
gnomAD - Genomes	European	Sub	75820	T=0.56513	C=0.43487
gnomAD - Genomes	African	Sub	41946	T=0.77993	C=0.22007
gnomAD - Genomes	American	Sub	13644	T=0.62210	C=0.37790
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.5783	C=0.4217
gnomAD - Genomes	East Asian	Sub	3126	T=0.7246	C=0.2754
gnomAD - Genomes	Other	Sub	2152	T=0.6571	C=0.3429
The PAGE Study	Global	Study-wide	78684	T=0.70646	C=0.29354
The PAGE Study	AfricanAmerican	Sub	32510	T=0.77219	C=0.22781
The PAGE Study	Mexican	Sub	10808	T=0.62139	C=0.37861
The PAGE Study	Asian	Sub	8318	T=0.7557	C=0.2443
The PAGE Study	PuertoRican	Sub	7916	T=0.6875	C=0.3125
The PAGE Study	NativeHawaiian	Sub	4532	T=0.5684	C=0.4316
The PAGE Study	Cuban	Sub	4228	T=0.6206	C=0.3794
The PAGE Study	Dominican	Sub	3826	T=0.6809	C=0.3191
The PAGE Study	CentralAmerican	Sub	2448	T=0.6426	C=0.3574
The PAGE Study	SouthAmerican	Sub	1982	T=0.6292	C=0.3708
The PAGE Study	NativeAmerican	Sub	1260	T=0.6214	C=0.3786
The PAGE Study	SouthAsian	Sub	856	T=0.737	C=0.263
14KJPN	JAPANESE	Study-wide	28256	T=0.76069	C=0.23931
8.3KJPN	JAPANESE	Study-wide	16760	T=0.76175	C=0.23825
1000Genomes_30x	Global	Study-wide	6404	T=0.7000	C=0.3000
1000Genomes_30x	African	Sub	1786	T=0.8108	C=0.1892
1000Genomes_30x	Europe	Sub	1266	T=0.5648	C=0.4352
1000Genomes_30x	South Asian	Sub	1202	T=0.7504	C=0.2496
1000Genomes_30x	East Asian	Sub	1170	T=0.6983	C=0.3017
1000Genomes_30x	American	Sub	980	T=0.613	C=0.387
1000Genomes	Global	Study-wide	5008	T=0.6993	C=0.3007
1000Genomes	African	Sub	1322	T=0.8086	C=0.1914
1000Genomes	East Asian	Sub	1008	T=0.6954	C=0.3046
1000Genomes	Europe	Sub	1006	T=0.5686	C=0.4314
1000Genomes	South Asian	Sub	978	T=0.748	C=0.252
1000Genomes	American	Sub	694	T=0.617	C=0.383
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.5051	C=0.4949
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.5711	C=0.4289
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.5825	C=0.4175
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.7676	C=0.2324
Korean Genome Project	KOREAN	Study-wide	1832	T=0.7898	C=0.2102
Genome-wide autozygosity in Daghestan	Global	Study-wide	1134	T=0.6667	C=0.3333
Genome-wide autozygosity in Daghestan	Daghestan	Sub	628	T=0.643	C=0.357
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	T=0.660	C=0.340
Genome-wide autozygosity in Daghestan	Central Asia	Sub	120	T=0.717	C=0.283
Genome-wide autozygosity in Daghestan	Europe	Sub	108	T=0.667	C=0.333
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	T=0.71	C=0.29
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	T=0.81	C=0.19
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.562	C=0.438
CNV burdens in cranial meningiomas	Global	Study-wide	788	T=0.750	C=0.250
CNV burdens in cranial meningiomas	CRM	Sub	788	T=0.750	C=0.250
Northern Sweden	ACPOP	Study-wide	600	T=0.550	C=0.450
HapMap	Global	Study-wide	314	T=0.732	C=0.268
HapMap	African	Sub	118	T=0.831	C=0.169
HapMap	American	Sub	112	T=0.589	C=0.411
HapMap	Asian	Sub	84	T=0.79	C=0.21
SGDP_PRJ	Global	Study-wide	268	T=0.381	C=0.619
Qatari	Global	Study-wide	216	T=0.681	C=0.319
A Vietnamese Genetic Variation Database	Global	Study-wide	216	T=0.593	C=0.407
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	74	T=0.57	C=0.43
The Danish reference pan genome	Danish	Study-wide	40	T=0.53	C=0.47
Siberian	Global	Study-wide	26	T=0.42	C=0.58

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 2	NC_000002.12:g.168068275T>C
GRCh37.p13 chr 2	NC_000002.11:g.168924785T>C
STK39 RefSeqGene	NG_052783.1:g.184321A>G

Gene: STK39, serine/threonine kinase 39 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
STK39 transcript variant 1	NM_013233.3:c.1243-2894A>G	N/A	Intron Variant
STK39 transcript variant X2	XM_005246465.3:c.1243-470… XM_005246465.3:c.1243-4705A>G	N/A	Intron Variant
STK39 transcript variant X1	XM_017003813.3:c.1243-289… XM_017003813.3:c.1243-2894A>G	N/A	Intron Variant
STK39 transcript variant X3	XM_017003814.3:c.1243-289… XM_017003814.3:c.1243-2894A>G	N/A	Intron Variant
STK39 transcript variant X6	XM_017003817.3:c.751-2894… XM_017003817.3:c.751-2894A>G	N/A	Intron Variant
STK39 transcript variant X2	XM_047443941.1:c.1243-470… XM_047443941.1:c.1243-4705A>G	N/A	Intron Variant
STK39 transcript variant X4	XM_047443944.1:c.937-2894… XM_047443944.1:c.937-2894A>G	N/A	Intron Variant
STK39 transcript variant X5	XM_017003816.3:c.	N/A	Genic Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	C
GRCh38.p14 chr 2	NC_000002.12:g.168068275=	NC_000002.12:g.168068275T>C
GRCh37.p13 chr 2	NC_000002.11:g.168924785=	NC_000002.11:g.168924785T>C
STK39 RefSeqGene	NG_052783.1:g.184321=	NG_052783.1:g.184321A>G
STK39 transcript	NM_013233.2:c.1243-2894=	NM_013233.2:c.1243-2894A>G
STK39 transcript variant 1	NM_013233.3:c.1243-2894=	NM_013233.3:c.1243-2894A>G
STK39 transcript variant X1	XM_005246465.1:c.1243-4705=	XM_005246465.1:c.1243-4705A>G
STK39 transcript variant X2	XM_005246465.3:c.1243-4705=	XM_005246465.3:c.1243-4705A>G
STK39 transcript variant X2	XM_005246466.1:c.751-2894=	XM_005246466.1:c.751-2894A>G
STK39 transcript variant X1	XM_017003813.3:c.1243-2894=	XM_017003813.3:c.1243-2894A>G
STK39 transcript variant X3	XM_017003814.3:c.1243-2894=	XM_017003814.3:c.1243-2894A>G
STK39 transcript variant X6	XM_017003817.3:c.751-2894=	XM_017003817.3:c.751-2894A>G
STK39 transcript variant X2	XM_047443941.1:c.1243-4705=	XM_047443941.1:c.1243-4705A>G
STK39 transcript variant X4	XM_047443944.1:c.937-2894=	XM_047443944.1:c.937-2894A>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

111 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	PERLEGEN	ss24306985	Sep 20, 2004 (123)
2	PERLEGEN	ss68834479	May 18, 2007 (127)
3	1000GENOMES	ss110223392	Jan 24, 2009 (130)
4	ILLUMINA	ss160433639	Dec 01, 2009 (131)
5	COMPLETE_GENOMICS	ss165576589	Jul 04, 2010 (132)
6	COMPLETE_GENOMICS	ss167392314	Jul 04, 2010 (132)
7	BUSHMAN	ss201341893	Jul 04, 2010 (132)
8	BCM-HGSC-SUB	ss205638579	Jul 04, 2010 (132)
9	1000GENOMES	ss219641372	Jul 14, 2010 (132)
10	1000GENOMES	ss231458989	Jul 14, 2010 (132)
11	1000GENOMES	ss238949446	Jul 15, 2010 (132)
12	BL	ss253659455	May 09, 2011 (134)
13	GMI	ss276777353	May 04, 2012 (137)
14	GMI	ss284481116	Apr 25, 2013 (138)
15	ILLUMINA	ss480209372	May 04, 2012 (137)
16	ILLUMINA	ss480219806	May 04, 2012 (137)
17	ILLUMINA	ss480950818	Sep 08, 2015 (146)
18	ILLUMINA	ss484902676	May 04, 2012 (137)
19	ILLUMINA	ss536956994	Sep 08, 2015 (146)
20	TISHKOFF	ss556021131	Apr 25, 2013 (138)
21	SSMP	ss649672373	Apr 25, 2013 (138)
22	ILLUMINA	ss778457731	Sep 08, 2015 (146)
23	ILLUMINA	ss782897661	Sep 08, 2015 (146)
24	ILLUMINA	ss783861054	Sep 08, 2015 (146)
25	ILLUMINA	ss832152394	Sep 08, 2015 (146)
26	ILLUMINA	ss833913401	Sep 08, 2015 (146)
27	EVA-GONL	ss977618899	Aug 21, 2014 (142)
28	JMKIDD_LAB	ss1069686714	Aug 21, 2014 (142)
29	1000GENOMES	ss1300334333	Aug 21, 2014 (142)
30	HAMMER_LAB	ss1397311246	Sep 08, 2015 (146)
31	DDI	ss1428813300	Apr 01, 2015 (144)
32	EVA_GENOME_DK	ss1579187966	Apr 01, 2015 (144)
33	EVA_DECODE	ss1587056240	Apr 01, 2015 (144)
34	EVA_UK10K_ALSPAC	ss1605096772	Apr 01, 2015 (144)
35	EVA_UK10K_TWINSUK	ss1648090805	Apr 01, 2015 (144)
36	ILLUMINA	ss1752322135	Sep 08, 2015 (146)
37	WEILL_CORNELL_DGM	ss1920871104	Feb 12, 2016 (147)
38	ILLUMINA	ss1946057526	Feb 12, 2016 (147)
39	ILLUMINA	ss1958476665	Feb 12, 2016 (147)
40	GENOMED	ss1968947012	Jul 19, 2016 (147)
41	JJLAB	ss2020969265	Sep 14, 2016 (149)
42	USC_VALOUEV	ss2149034031	Dec 20, 2016 (150)
43	HUMAN_LONGEVITY	ss2236385146	Dec 20, 2016 (150)
44	SYSTEMSBIOZJU	ss2624988552	Nov 08, 2017 (151)
45	ILLUMINA	ss2633701637	Nov 08, 2017 (151)
46	GRF	ss2703671086	Nov 08, 2017 (151)
47	ILLUMINA	ss2710916533	Nov 08, 2017 (151)
48	GNOMAD	ss2782552779	Nov 08, 2017 (151)
49	AFFY	ss2985190780	Nov 08, 2017 (151)
50	AFFY	ss2985812328	Nov 08, 2017 (151)
51	SWEGEN	ss2990825938	Nov 08, 2017 (151)
52	ILLUMINA	ss3022037936	Nov 08, 2017 (151)
53	BIOINF_KMB_FNS_UNIBA	ss3024244998	Nov 08, 2017 (151)
54	CSHL	ss3344594132	Nov 08, 2017 (151)
55	ILLUMINA	ss3625769742	Oct 11, 2018 (152)
56	ILLUMINA	ss3628216116	Oct 11, 2018 (152)
57	ILLUMINA	ss3631663395	Oct 11, 2018 (152)
58	ILLUMINA	ss3633224031	Oct 11, 2018 (152)
59	ILLUMINA	ss3633936803	Oct 11, 2018 (152)
60	ILLUMINA	ss3634797362	Oct 11, 2018 (152)
61	ILLUMINA	ss3635622473	Oct 11, 2018 (152)
62	ILLUMINA	ss3636486607	Oct 11, 2018 (152)
63	ILLUMINA	ss3637374458	Oct 11, 2018 (152)
64	ILLUMINA	ss3640504661	Oct 11, 2018 (152)
65	ILLUMINA	ss3641116506	Oct 11, 2018 (152)
66	ILLUMINA	ss3641412566	Oct 11, 2018 (152)
67	ILLUMINA	ss3644760152	Oct 11, 2018 (152)
68	ILLUMINA	ss3652482236	Oct 11, 2018 (152)
69	ILLUMINA	ss3653957712	Oct 11, 2018 (152)
70	EGCUT_WGS	ss3658695669	Jul 13, 2019 (153)
71	EVA_DECODE	ss3705376233	Jul 13, 2019 (153)
72	ILLUMINA	ss3725843248	Jul 13, 2019 (153)
73	ACPOP	ss3729084921	Jul 13, 2019 (153)
74	ILLUMINA	ss3744185943	Jul 13, 2019 (153)
75	ILLUMINA	ss3745097210	Jul 13, 2019 (153)
76	EVA	ss3757691340	Jul 13, 2019 (153)
77	PAGE_CC	ss3770963096	Jul 13, 2019 (153)
78	ILLUMINA	ss3772593807	Jul 13, 2019 (153)
79	PACBIO	ss3784060205	Jul 13, 2019 (153)
80	PACBIO	ss3789613193	Jul 13, 2019 (153)
81	PACBIO	ss3794486190	Jul 13, 2019 (153)
82	KHV_HUMAN_GENOMES	ss3802050023	Jul 13, 2019 (153)
83	EVA	ss3827341210	Apr 25, 2020 (154)
84	EVA	ss3837088301	Apr 25, 2020 (154)
85	EVA	ss3842508070	Apr 25, 2020 (154)
86	SGDP_PRJ	ss3853925208	Apr 25, 2020 (154)
87	KRGDB	ss3899553307	Apr 25, 2020 (154)
88	KOGIC	ss3949453363	Apr 25, 2020 (154)
89	EVA	ss3984493186	Apr 26, 2021 (155)
90	EVA	ss3984935733	Apr 26, 2021 (155)
91	EVA	ss4017032875	Apr 26, 2021 (155)
92	TOPMED	ss4532937239	Apr 26, 2021 (155)
93	TOMMO_GENOMICS	ss5155010862	Apr 26, 2021 (155)
94	EVA	ss5237306347	Apr 26, 2021 (155)
95	1000G_HIGH_COVERAGE	ss5250886962	Oct 12, 2022 (156)
96	EVA	ss5314785961	Oct 12, 2022 (156)
97	EVA	ss5333950384	Oct 12, 2022 (156)
98	HUGCELL_USP	ss5450612916	Oct 12, 2022 (156)
99	EVA	ss5506680481	Oct 12, 2022 (156)
100	1000G_HIGH_COVERAGE	ss5527633669	Oct 12, 2022 (156)
101	SANFORD_IMAGENETICS	ss5624463412	Oct 12, 2022 (156)
102	SANFORD_IMAGENETICS	ss5630309174	Oct 12, 2022 (156)
103	TOMMO_GENOMICS	ss5685463380	Oct 12, 2022 (156)
104	EVA	ss5799551737	Oct 12, 2022 (156)
105	YY_MCH	ss5802943782	Oct 12, 2022 (156)
106	EVA	ss5821144822	Oct 12, 2022 (156)
107	EVA	ss5847890739	Oct 12, 2022 (156)
108	EVA	ss5852820505	Oct 12, 2022 (156)
109	EVA	ss5933385042	Oct 12, 2022 (156)
110	EVA	ss5956531261	Oct 12, 2022 (156)
111	EVA	ss5979589214	Oct 12, 2022 (156)
112	1000Genomes	NC_000002.11 - 168924785	Oct 11, 2018 (152)
113	1000Genomes_30x	NC_000002.12 - 168068275	Oct 12, 2022 (156)
114	The Avon Longitudinal Study of Parents and Children	NC_000002.11 - 168924785	Oct 11, 2018 (152)
115	Genome-wide autozygosity in Daghestan	NC_000002.10 - 168633031	Apr 25, 2020 (154)
116	Genetic variation in the Estonian population	NC_000002.11 - 168924785	Oct 11, 2018 (152)
117	The Danish reference pan genome	NC_000002.11 - 168924785	Apr 25, 2020 (154)
118	gnomAD - Genomes	NC_000002.12 - 168068275	Apr 26, 2021 (155)
119	Genome of the Netherlands Release 5	NC_000002.11 - 168924785	Apr 25, 2020 (154)
120	HapMap	NC_000002.12 - 168068275	Apr 25, 2020 (154)
121	KOREAN population from KRGDB	NC_000002.11 - 168924785	Apr 25, 2020 (154)
122	Korean Genome Project	NC_000002.12 - 168068275	Apr 25, 2020 (154)
123	Northern Sweden	NC_000002.11 - 168924785	Jul 13, 2019 (153)
124	The PAGE Study	NC_000002.12 - 168068275	Jul 13, 2019 (153)
125	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000002.11 - 168924785	Apr 26, 2021 (155)
126	CNV burdens in cranial meningiomas	NC_000002.11 - 168924785	Apr 26, 2021 (155)
127	Qatari	NC_000002.11 - 168924785	Apr 25, 2020 (154)
128	SGDP_PRJ	NC_000002.11 - 168924785	Apr 25, 2020 (154)
129	Siberian	NC_000002.11 - 168924785	Apr 25, 2020 (154)
130	8.3KJPN	NC_000002.11 - 168924785	Apr 26, 2021 (155)
131	14KJPN	NC_000002.12 - 168068275	Oct 12, 2022 (156)
132	TopMed	NC_000002.12 - 168068275	Apr 26, 2021 (155)
133	UK 10K study - Twins	NC_000002.11 - 168924785	Oct 11, 2018 (152)
134	A Vietnamese Genetic Variation Database	NC_000002.11 - 168924785	Jul 13, 2019 (153)
135	ALFA	NC_000002.12 - 168068275	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
261125, ss110223392, ss165576589, ss167392314, ss201341893, ss205638579, ss253659455, ss276777353, ss284481116, ss480209372, ss1397311246, ss1587056240	NC_000002.10:168633030:T:C	NC_000002.12:168068274:T:C	(self)
11388142, 6282411, 4433917, 5352905, 2759919, 6730701, 2369786, 161660, 42521, 2913034, 5942188, 1550385, 12980169, 6282411, 1365092, ss219641372, ss231458989, ss238949446, ss480219806, ss480950818, ss484902676, ss536956994, ss556021131, ss649672373, ss778457731, ss782897661, ss783861054, ss832152394, ss833913401, ss977618899, ss1069686714, ss1300334333, ss1428813300, ss1579187966, ss1605096772, ss1648090805, ss1752322135, ss1920871104, ss1946057526, ss1958476665, ss1968947012, ss2020969265, ss2149034031, ss2624988552, ss2633701637, ss2703671086, ss2710916533, ss2782552779, ss2985190780, ss2985812328, ss2990825938, ss3022037936, ss3344594132, ss3625769742, ss3628216116, ss3631663395, ss3633224031, ss3633936803, ss3634797362, ss3635622473, ss3636486607, ss3637374458, ss3640504661, ss3641116506, ss3641412566, ss3644760152, ss3652482236, ss3653957712, ss3658695669, ss3729084921, ss3744185943, ss3745097210, ss3757691340, ss3772593807, ss3784060205, ss3789613193, ss3794486190, ss3827341210, ss3837088301, ss3853925208, ss3899553307, ss3984493186, ss3984935733, ss4017032875, ss5155010862, ss5237306347, ss5314785961, ss5333950384, ss5506680481, ss5624463412, ss5630309174, ss5799551737, ss5821144822, ss5847890739, ss5956531261, ss5979589214	NC_000002.11:168924784:T:C	NC_000002.12:168068274:T:C	(self)
15159604, 81192636, 1943941, 5831364, 184565, 19300484, 336760118, 1984238427, ss2236385146, ss3024244998, ss3705376233, ss3725843248, ss3770963096, ss3802050023, ss3842508070, ss3949453363, ss4532937239, ss5250886962, ss5450612916, ss5527633669, ss5685463380, ss5802943782, ss5852820505, ss5933385042	NC_000002.12:168068274:T:C	NC_000002.12:168068274:T:C	(self)
ss24306985, ss68834479, ss160433639	NT_005403.17:19134202:T:C	NC_000002.12:168068274:T:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs17176633

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs17176633