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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1471460

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr15:67796961 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A / G>C
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.411886 (109022/264690, TOPMED)
A=0.31871 (21581/67714, ALFA)
G=0.27493 (7769/28258, 14KJPN) (+ 18 more)
G=0.27607 (4627/16760, 8.3KJPN)
A=0.4980 (3189/6404, 1000G_30x)
G=0.4990 (2499/5008, 1000G)
A=0.2942 (1318/4480, Estonian)
A=0.3163 (1219/3854, ALSPAC)
A=0.3147 (1167/3708, TWINSUK)
G=0.2747 (805/2930, KOREAN)
G=0.4813 (1003/2084, HGDP_Stanford)
A=0.4736 (896/1892, HapMap)
A=0.4259 (483/1134, Daghestan)
A=0.289 (288/998, GoNL)
A=0.293 (176/600, NorthernSweden)
G=0.281 (121/430, SGDP_PRJ)
G=0.458 (99/216, Qatari)
G=0.297 (63/212, Vietnamese)
A=0.20 (16/80, Ancient Sardinia)
A=0.33 (13/40, GENOME_DK)
G=0.35 (12/34, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
MAP2K5 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 67714 G=0.68129 A=0.31871, C=0.00000
European Sub 55336 G=0.69734 A=0.30266, C=0.00000
African Sub 5300 G=0.6466 A=0.3534, C=0.0000
African Others Sub 186 G=0.645 A=0.355, C=0.000
African American Sub 5114 G=0.6467 A=0.3533, C=0.0000
Asian Sub 94 G=0.38 A=0.62, C=0.00
East Asian Sub 74 G=0.39 A=0.61, C=0.00
Other Asian Sub 20 G=0.35 A=0.65, C=0.00
Latin American 1 Sub 146 G=0.699 A=0.301, C=0.000
Latin American 2 Sub 702 G=0.526 A=0.474, C=0.000
South Asian Sub 4902 G=0.5736 A=0.4264, C=0.0000
Other Sub 1234 G=0.6475 A=0.3525, C=0.0000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.588114 A=0.411886
Allele Frequency Aggregator Total Global 67714 G=0.68129 A=0.31871, C=0.00000
Allele Frequency Aggregator European Sub 55336 G=0.69734 A=0.30266, C=0.00000
Allele Frequency Aggregator African Sub 5300 G=0.6466 A=0.3534, C=0.0000
Allele Frequency Aggregator South Asian Sub 4902 G=0.5736 A=0.4264, C=0.0000
Allele Frequency Aggregator Other Sub 1234 G=0.6475 A=0.3525, C=0.0000
Allele Frequency Aggregator Latin American 2 Sub 702 G=0.526 A=0.474, C=0.000
Allele Frequency Aggregator Latin American 1 Sub 146 G=0.699 A=0.301, C=0.000
Allele Frequency Aggregator Asian Sub 94 G=0.38 A=0.62, C=0.00
14KJPN JAPANESE Study-wide 28258 G=0.27493 A=0.72507
8.3KJPN JAPANESE Study-wide 16760 G=0.27607 A=0.72393
1000Genomes_30x Global Study-wide 6404 G=0.5020 A=0.4980
1000Genomes_30x African Sub 1786 G=0.5577 A=0.4423
1000Genomes_30x Europe Sub 1266 G=0.6564 A=0.3436
1000Genomes_30x South Asian Sub 1202 G=0.5349 A=0.4651
1000Genomes_30x East Asian Sub 1170 G=0.2957 A=0.7043
1000Genomes_30x American Sub 980 G=0.407 A=0.593
1000Genomes Global Study-wide 5008 G=0.4990 A=0.5010
1000Genomes African Sub 1322 G=0.5651 A=0.4349
1000Genomes East Asian Sub 1008 G=0.2937 A=0.7063
1000Genomes Europe Sub 1006 G=0.6471 A=0.3529
1000Genomes South Asian Sub 978 G=0.531 A=0.469
1000Genomes American Sub 694 G=0.412 A=0.588
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.7058 A=0.2942
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.6837 A=0.3163
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.6853 A=0.3147
KOREAN population from KRGDB KOREAN Study-wide 2930 G=0.2747 A=0.7253
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 G=0.4813 A=0.5187
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 G=0.323 A=0.677
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 G=0.580 A=0.420
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 G=0.637 A=0.363
HGDP-CEPH-db Supplement 1 Europe Sub 320 G=0.713 A=0.287
HGDP-CEPH-db Supplement 1 Africa Sub 242 G=0.537 A=0.463
HGDP-CEPH-db Supplement 1 America Sub 216 G=0.056 A=0.944
HGDP-CEPH-db Supplement 1 Oceania Sub 72 G=0.25 A=0.75
HapMap Global Study-wide 1892 G=0.5264 A=0.4736
HapMap American Sub 770 G=0.514 A=0.486
HapMap African Sub 692 G=0.608 A=0.392
HapMap Asian Sub 254 G=0.264 A=0.736
HapMap Europe Sub 176 G=0.636 A=0.364
Genome-wide autozygosity in Daghestan Global Study-wide 1134 G=0.5741 A=0.4259
Genome-wide autozygosity in Daghestan Daghestan Sub 626 G=0.546 A=0.454
Genome-wide autozygosity in Daghestan Near_East Sub 144 G=0.653 A=0.347
Genome-wide autozygosity in Daghestan Central Asia Sub 122 G=0.516 A=0.484
Genome-wide autozygosity in Daghestan Europe Sub 108 G=0.704 A=0.296
Genome-wide autozygosity in Daghestan South Asian Sub 98 G=0.54 A=0.46
Genome-wide autozygosity in Daghestan Caucasus Sub 36 G=0.64 A=0.36
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.711 A=0.289
Northern Sweden ACPOP Study-wide 600 G=0.707 A=0.293
SGDP_PRJ Global Study-wide 430 G=0.281 A=0.719
Qatari Global Study-wide 216 G=0.458 A=0.542
A Vietnamese Genetic Variation Database Global Study-wide 212 G=0.297 A=0.703
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 80 G=0.80 A=0.20
The Danish reference pan genome Danish Study-wide 40 G=0.68 A=0.33
Siberian Global Study-wide 34 G=0.35 A=0.65
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 15 NC_000015.10:g.67796961G>A
GRCh38.p14 chr 15 NC_000015.10:g.67796961G>C
GRCh37.p13 chr 15 NC_000015.9:g.68089299G>A
GRCh37.p13 chr 15 NC_000015.9:g.68089299G>C
MAP2K5 RefSeqGene NG_029143.1:g.259279G>A
MAP2K5 RefSeqGene NG_029143.1:g.259279G>C
Gene: MAP2K5, mitogen-activated protein kinase kinase 5 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
MAP2K5 transcript variant 3 NM_001206804.2:c.1135-968…

NM_001206804.2:c.1135-9685G>A

N/A Intron Variant
MAP2K5 transcript variant 2 NM_002757.4:c.1213-9685G>A N/A Intron Variant
MAP2K5 transcript variant 1 NM_145160.3:c.1243-9685G>A N/A Intron Variant
MAP2K5 transcript variant X1 XM_011521787.4:c. N/A Genic Downstream Transcript Variant
MAP2K5 transcript variant X2 XM_011521788.4:c. N/A Genic Downstream Transcript Variant
MAP2K5 transcript variant X4 XM_017022414.3:c. N/A Genic Downstream Transcript Variant
MAP2K5 transcript variant X5 XM_047432856.1:c. N/A Genic Downstream Transcript Variant
MAP2K5 transcript variant X3 XR_007064474.1:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A C
GRCh38.p14 chr 15 NC_000015.10:g.67796961= NC_000015.10:g.67796961G>A NC_000015.10:g.67796961G>C
GRCh37.p13 chr 15 NC_000015.9:g.68089299= NC_000015.9:g.68089299G>A NC_000015.9:g.68089299G>C
MAP2K5 RefSeqGene NG_029143.1:g.259279= NG_029143.1:g.259279G>A NG_029143.1:g.259279G>C
MAP2K5 transcript variant 3 NM_001206804.1:c.1135-9685= NM_001206804.1:c.1135-9685G>A NM_001206804.1:c.1135-9685G>C
MAP2K5 transcript variant 3 NM_001206804.2:c.1135-9685= NM_001206804.2:c.1135-9685G>A NM_001206804.2:c.1135-9685G>C
MAP2K5 transcript variant 2 NM_002757.3:c.1213-9685= NM_002757.3:c.1213-9685G>A NM_002757.3:c.1213-9685G>C
MAP2K5 transcript variant 2 NM_002757.4:c.1213-9685= NM_002757.4:c.1213-9685G>A NM_002757.4:c.1213-9685G>C
MAP2K5 transcript variant 1 NM_145160.2:c.1243-9685= NM_145160.2:c.1243-9685G>A NM_145160.2:c.1243-9685G>C
MAP2K5 transcript variant 1 NM_145160.3:c.1243-9685= NM_145160.3:c.1243-9685G>A NM_145160.3:c.1243-9685G>C
MAP2K5 transcript variant X1 XM_005254542.1:c.1213-9685= XM_005254542.1:c.1213-9685G>A XM_005254542.1:c.1213-9685G>C
MAP2K5 transcript variant X2 XM_005254543.1:c.835-9685= XM_005254543.1:c.835-9685G>A XM_005254543.1:c.835-9685G>C
MAP2K5 transcript variant X3 XM_005254544.1:c.763-9685= XM_005254544.1:c.763-9685G>A XM_005254544.1:c.763-9685G>C
MAP2K5 transcript variant X4 XM_005254545.1:c.673-9685= XM_005254545.1:c.673-9685G>A XM_005254545.1:c.673-9685G>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

95 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss2292365 Oct 23, 2000 (88)
2 WI_SSAHASNP ss6589974 Feb 20, 2003 (111)
3 BCM_SSAHASNP ss10774797 Jul 11, 2003 (116)
4 ILLUMINA ss66704696 Dec 02, 2006 (127)
5 ILLUMINA ss67112392 Dec 02, 2006 (127)
6 ILLUMINA ss67449383 Dec 02, 2006 (127)
7 ILLUMINA ss70435409 May 18, 2007 (127)
8 ILLUMINA ss70622068 May 24, 2008 (130)
9 ILLUMINA ss71170883 May 18, 2007 (127)
10 ILLUMINA ss75674115 Dec 07, 2007 (129)
11 HGSV ss80751087 Dec 14, 2007 (130)
12 KRIBB_YJKIM ss83790377 Dec 14, 2007 (130)
13 HGSV ss83945171 Dec 14, 2007 (130)
14 BCMHGSC_JDW ss90198150 Mar 24, 2008 (129)
15 BGI ss103248835 Dec 01, 2009 (131)
16 1000GENOMES ss114342882 Jan 25, 2009 (130)
17 ILLUMINA-UK ss118271182 Feb 14, 2009 (130)
18 ILLUMINA ss121711797 Dec 01, 2009 (131)
19 ENSEMBL ss136408686 Dec 01, 2009 (131)
20 ILLUMINA ss153458019 Dec 01, 2009 (131)
21 GMI ss156684684 Dec 01, 2009 (131)
22 ILLUMINA ss159274014 Dec 01, 2009 (131)
23 COMPLETE_GENOMICS ss168246200 Jul 04, 2010 (132)
24 COMPLETE_GENOMICS ss169808059 Jul 04, 2010 (132)
25 ILLUMINA ss170547632 Jul 04, 2010 (132)
26 ILLUMINA ss172527415 Jul 04, 2010 (132)
27 BUSHMAN ss200985045 Jul 04, 2010 (132)
28 1000GENOMES ss226953384 Jul 14, 2010 (132)
29 1000GENOMES ss236822132 Jul 15, 2010 (132)
30 1000GENOMES ss243200814 Jul 15, 2010 (132)
31 GMI ss282302271 May 04, 2012 (137)
32 PJP ss291744222 May 09, 2011 (134)
33 ILLUMINA ss410811272 Sep 17, 2011 (135)
34 ILLUMINA ss536877568 Sep 08, 2015 (146)
35 TISHKOFF ss564551106 Apr 25, 2013 (138)
36 SSMP ss660285651 Apr 25, 2013 (138)
37 ILLUMINA ss825404683 Apr 01, 2015 (144)
38 ILLUMINA ss832786177 Jul 13, 2019 (153)
39 EVA-GONL ss991908280 Aug 21, 2014 (142)
40 JMKIDD_LAB ss1080217331 Aug 21, 2014 (142)
41 1000GENOMES ss1353939251 Aug 21, 2014 (142)
42 HAMMER_LAB ss1397700540 Sep 08, 2015 (146)
43 DDI ss1427663044 Apr 01, 2015 (144)
44 EVA_GENOME_DK ss1577684589 Apr 01, 2015 (144)
45 EVA_UK10K_ALSPAC ss1633254448 Apr 01, 2015 (144)
46 EVA_UK10K_TWINSUK ss1676248481 Apr 01, 2015 (144)
47 EVA_DECODE ss1695931904 Apr 01, 2015 (144)
48 EVA_SVP ss1713499277 Apr 01, 2015 (144)
49 HAMMER_LAB ss1808257434 Sep 08, 2015 (146)
50 WEILL_CORNELL_DGM ss1935313367 Feb 12, 2016 (147)
51 GENOMED ss1968137369 Jul 19, 2016 (147)
52 JJLAB ss2028437701 Sep 14, 2016 (149)
53 USC_VALOUEV ss2156843412 Dec 20, 2016 (150)
54 HUMAN_LONGEVITY ss2207773465 Dec 20, 2016 (150)
55 SYSTEMSBIOZJU ss2628714098 Nov 08, 2017 (151)
56 ILLUMINA ss2635059112 Nov 08, 2017 (151)
57 GRF ss2701320185 Nov 08, 2017 (151)
58 GNOMAD ss2936258827 Nov 08, 2017 (151)
59 SWEGEN ss3013474590 Nov 08, 2017 (151)
60 BIOINF_KMB_FNS_UNIBA ss3028044062 Nov 08, 2017 (151)
61 CSHL ss3351169621 Nov 08, 2017 (151)
62 ILLUMINA ss3627389673 Oct 12, 2018 (152)
63 ILLUMINA ss3638092670 Oct 12, 2018 (152)
64 ILLUMINA ss3639059264 Oct 12, 2018 (152)
65 ILLUMINA ss3639535053 Oct 12, 2018 (152)
66 ILLUMINA ss3643076434 Oct 12, 2018 (152)
67 EGCUT_WGS ss3680621555 Jul 13, 2019 (153)
68 EVA_DECODE ss3698127566 Jul 13, 2019 (153)
69 ACPOP ss3741026924 Jul 13, 2019 (153)
70 EVA ss3753234992 Jul 13, 2019 (153)
71 PACBIO ss3787881512 Jul 13, 2019 (153)
72 PACBIO ss3792888232 Jul 13, 2019 (153)
73 PACBIO ss3797772813 Jul 13, 2019 (153)
74 KHV_HUMAN_GENOMES ss3818546142 Jul 13, 2019 (153)
75 EVA ss3834295961 Apr 27, 2020 (154)
76 EVA ss3840747516 Apr 27, 2020 (154)
77 EVA ss3846236937 Apr 27, 2020 (154)
78 HGDP ss3847527673 Apr 27, 2020 (154)
79 SGDP_PRJ ss3883162625 Apr 27, 2020 (154)
80 KRGDB ss3932365172 Apr 27, 2020 (154)
81 EVA ss3985724059 Apr 27, 2021 (155)
82 TOPMED ss4995557327 Apr 27, 2021 (155)
83 TOMMO_GENOMICS ss5216744258 Apr 27, 2021 (155)
84 1000G_HIGH_COVERAGE ss5298856857 Oct 16, 2022 (156)
85 EVA ss5419994459 Oct 16, 2022 (156)
86 HUGCELL_USP ss5492545811 Oct 16, 2022 (156)
87 EVA ss5511470898 Oct 16, 2022 (156)
88 1000G_HIGH_COVERAGE ss5600465752 Oct 16, 2022 (156)
89 SANFORD_IMAGENETICS ss5657745743 Oct 16, 2022 (156)
90 TOMMO_GENOMICS ss5770713191 Oct 16, 2022 (156)
91 YY_MCH ss5815439206 Oct 16, 2022 (156)
92 EVA ss5828363703 Oct 16, 2022 (156)
93 EVA ss5851343139 Oct 16, 2022 (156)
94 EVA ss5876357328 Oct 16, 2022 (156)
95 EVA ss5949157907 Oct 16, 2022 (156)
96 1000Genomes NC_000015.9 - 68089299 Oct 12, 2018 (152)
97 1000Genomes_30x NC_000015.10 - 67796961 Oct 16, 2022 (156)
98 The Avon Longitudinal Study of Parents and Children NC_000015.9 - 68089299 Oct 12, 2018 (152)
99 Genome-wide autozygosity in Daghestan NC_000015.8 - 65876353 Apr 27, 2020 (154)
100 Genetic variation in the Estonian population NC_000015.9 - 68089299 Oct 12, 2018 (152)
101 The Danish reference pan genome NC_000015.9 - 68089299 Apr 27, 2020 (154)
102 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 472543090 (NC_000015.10:67796960:G:A 53461/139990)
Row 472543091 (NC_000015.10:67796960:G:C 2/140048)

- Apr 27, 2021 (155)
103 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 472543090 (NC_000015.10:67796960:G:A 53461/139990)
Row 472543091 (NC_000015.10:67796960:G:C 2/140048)

- Apr 27, 2021 (155)
104 Genome of the Netherlands Release 5 NC_000015.9 - 68089299 Apr 27, 2020 (154)
105 HGDP-CEPH-db Supplement 1 NC_000015.8 - 65876353 Apr 27, 2020 (154)
106 HapMap NC_000015.10 - 67796961 Apr 27, 2020 (154)
107 KOREAN population from KRGDB NC_000015.9 - 68089299 Apr 27, 2020 (154)
108 Northern Sweden NC_000015.9 - 68089299 Jul 13, 2019 (153)
109 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000015.9 - 68089299 Apr 27, 2021 (155)
110 Qatari NC_000015.9 - 68089299 Apr 27, 2020 (154)
111 SGDP_PRJ NC_000015.9 - 68089299 Apr 27, 2020 (154)
112 Siberian NC_000015.9 - 68089299 Apr 27, 2020 (154)
113 8.3KJPN NC_000015.9 - 68089299 Apr 27, 2021 (155)
114 14KJPN NC_000015.10 - 67796961 Oct 16, 2022 (156)
115 TopMed NC_000015.10 - 67796961 Apr 27, 2021 (155)
116 UK 10K study - Twins NC_000015.9 - 68089299 Oct 12, 2018 (152)
117 A Vietnamese Genetic Variation Database NC_000015.9 - 68089299 Jul 13, 2019 (153)
118 ALFA NC_000015.10 - 67796961 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58171593 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
170678, 205565, ss80751087, ss83945171, ss90198150, ss114342882, ss118271182, ss168246200, ss169808059, ss200985045, ss282302271, ss291744222, ss825404683, ss1397700540, ss1695931904, ss1713499277, ss2635059112, ss3639059264, ss3639535053, ss3643076434, ss3847527673 NC_000015.8:65876352:G:A NC_000015.10:67796960:G:A (self)
67028022, 37218815, 26359803, 3906300, 16613304, 39542566, 14311789, 949986, 17355297, 35179605, 9359766, 74713565, 37218815, 8278844, ss226953384, ss236822132, ss243200814, ss536877568, ss564551106, ss660285651, ss832786177, ss991908280, ss1080217331, ss1353939251, ss1427663044, ss1577684589, ss1633254448, ss1676248481, ss1808257434, ss1935313367, ss1968137369, ss2028437701, ss2156843412, ss2628714098, ss2701320185, ss2936258827, ss3013474590, ss3351169621, ss3627389673, ss3638092670, ss3680621555, ss3741026924, ss3753234992, ss3787881512, ss3792888232, ss3797772813, ss3834295961, ss3840747516, ss3883162625, ss3932365172, ss3985724059, ss5216744258, ss5419994459, ss5511470898, ss5657745743, ss5828363703, ss5949157907 NC_000015.9:68089298:G:A NC_000015.10:67796960:G:A (self)
87991687, 1287034, 104550295, 211102987, 12640821012, ss2207773465, ss3028044062, ss3698127566, ss3818546142, ss3846236937, ss4995557327, ss5298856857, ss5492545811, ss5600465752, ss5770713191, ss5815439206, ss5851343139, ss5876357328 NC_000015.10:67796960:G:A NC_000015.10:67796960:G:A (self)
ss10774797 NT_010194.15:38878671:G:A NC_000015.10:67796960:G:A (self)
ss2292365, ss6589974, ss66704696, ss67112392, ss67449383, ss70435409, ss70622068, ss71170883, ss75674115, ss83790377, ss103248835, ss121711797, ss136408686, ss153458019, ss156684684, ss159274014, ss170547632, ss172527415, ss410811272 NT_010194.17:38879855:G:A NC_000015.10:67796960:G:A (self)
12640821012 NC_000015.10:67796960:G:C NC_000015.10:67796960:G:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1471460

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07