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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1035050

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr17:49486650 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C / T>G
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.417114 (142628/341940, ALFA)
C=0.348487 (92241/264690, TOPMED)
C=0.339884 (47598/140042, GnomAD) (+ 19 more)
C=0.34897 (27464/78700, PAGE_STUDY)
T=0.24007 (6784/28258, 14KJPN)
T=0.23592 (3954/16760, 8.3KJPN)
C=0.4008 (2567/6404, 1000G_30x)
C=0.4093 (2050/5008, 1000G)
C=0.3835 (1718/4480, Estonian)
C=0.4242 (1635/3854, ALSPAC)
C=0.4161 (1543/3708, TWINSUK)
T=0.2355 (690/2930, KOREAN)
C=0.4472 (932/2084, HGDP_Stanford)
C=0.4043 (765/1892, HapMap)
C=0.409 (408/998, GoNL)
T=0.234 (185/790, PRJEB37584)
C=0.373 (224/600, NorthernSweden)
T=0.322 (119/370, SGDP_PRJ)
C=0.417 (90/216, Qatari)
C=0.39 (30/76, Ancient Sardinia)
T=0.32 (14/44, Siberian)
C=0.40 (16/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 342156 T=0.582930 C=0.417070
European Sub 299116 T=0.583088 C=0.416912
African Sub 10662 T=0.85950 C=0.14050
African Others Sub 402 T=0.938 C=0.062
African American Sub 10260 T=0.85643 C=0.14357
Asian Sub 6878 T=0.2493 C=0.7507
East Asian Sub 4940 T=0.2269 C=0.7731
Other Asian Sub 1938 T=0.3065 C=0.6935
Latin American 1 Sub 1074 T=0.6443 C=0.3557
Latin American 2 Sub 3160 T=0.5620 C=0.4380
South Asian Sub 5218 T=0.5761 C=0.4239
Other Sub 16048 T=0.54144 C=0.45856


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 341940 T=0.582886 C=0.417114
Allele Frequency Aggregator European Sub 298936 T=0.583068 C=0.416932
Allele Frequency Aggregator Other Sub 16026 T=0.54118 C=0.45882
Allele Frequency Aggregator African Sub 10648 T=0.85932 C=0.14068
Allele Frequency Aggregator Asian Sub 6878 T=0.2493 C=0.7507
Allele Frequency Aggregator South Asian Sub 5218 T=0.5761 C=0.4239
Allele Frequency Aggregator Latin American 2 Sub 3160 T=0.5620 C=0.4380
Allele Frequency Aggregator Latin American 1 Sub 1074 T=0.6443 C=0.3557
TopMed Global Study-wide 264690 T=0.651513 C=0.348487
gnomAD - Genomes Global Study-wide 140042 T=0.660116 C=0.339884
gnomAD - Genomes European Sub 75802 T=0.58965 C=0.41035
gnomAD - Genomes African Sub 41998 T=0.86126 C=0.13874
gnomAD - Genomes American Sub 13648 T=0.55070 C=0.44930
gnomAD - Genomes Ashkenazi Jewish Sub 3322 T=0.6240 C=0.3760
gnomAD - Genomes East Asian Sub 3122 T=0.2249 C=0.7751
gnomAD - Genomes Other Sub 2150 T=0.5977 C=0.4023
The PAGE Study Global Study-wide 78700 T=0.65103 C=0.34897
The PAGE Study AfricanAmerican Sub 32516 T=0.85493 C=0.14507
The PAGE Study Mexican Sub 10810 T=0.54126 C=0.45874
The PAGE Study Asian Sub 8316 T=0.2336 C=0.7664
The PAGE Study PuertoRican Sub 7918 T=0.6313 C=0.3687
The PAGE Study NativeHawaiian Sub 4534 T=0.4025 C=0.5975
The PAGE Study Cuban Sub 4230 T=0.6057 C=0.3943
The PAGE Study Dominican Sub 3828 T=0.6735 C=0.3265
The PAGE Study CentralAmerican Sub 2450 T=0.5682 C=0.4318
The PAGE Study SouthAmerican Sub 1982 T=0.5590 C=0.4410
The PAGE Study NativeAmerican Sub 1260 T=0.5762 C=0.4238
The PAGE Study SouthAsian Sub 856 T=0.529 C=0.471
14KJPN JAPANESE Study-wide 28258 T=0.24007 C=0.75993
8.3KJPN JAPANESE Study-wide 16760 T=0.23592 C=0.76408
1000Genomes_30x Global Study-wide 6404 T=0.5992 C=0.4008
1000Genomes_30x African Sub 1786 T=0.9082 C=0.0918
1000Genomes_30x Europe Sub 1266 T=0.5845 C=0.4155
1000Genomes_30x South Asian Sub 1202 T=0.5092 C=0.4908
1000Genomes_30x East Asian Sub 1170 T=0.2538 C=0.7462
1000Genomes_30x American Sub 980 T=0.578 C=0.422
1000Genomes Global Study-wide 5008 T=0.5907 C=0.4093
1000Genomes African Sub 1322 T=0.9054 C=0.0946
1000Genomes East Asian Sub 1008 T=0.2569 C=0.7431
1000Genomes Europe Sub 1006 T=0.5905 C=0.4095
1000Genomes South Asian Sub 978 T=0.512 C=0.488
1000Genomes American Sub 694 T=0.586 C=0.414
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.6165 C=0.3835
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.5758 C=0.4242
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.5839 C=0.4161
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.2355 A=0.0000, C=0.7645, G=0.0000
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 T=0.5528 C=0.4472
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 T=0.264 C=0.736
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.570 C=0.430
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.609 C=0.391
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.588 C=0.412
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=0.872 C=0.128
HGDP-CEPH-db Supplement 1 America Sub 216 T=0.579 C=0.421
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.76 C=0.24
HapMap Global Study-wide 1892 T=0.5957 C=0.4043
HapMap American Sub 770 T=0.514 C=0.486
HapMap African Sub 692 T=0.825 C=0.175
HapMap Asian Sub 254 T=0.240 C=0.760
HapMap Europe Sub 176 T=0.562 C=0.438
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.591 C=0.409
CNV burdens in cranial meningiomas Global Study-wide 790 T=0.234 C=0.766
CNV burdens in cranial meningiomas CRM Sub 790 T=0.234 C=0.766
Northern Sweden ACPOP Study-wide 600 T=0.627 C=0.373
SGDP_PRJ Global Study-wide 370 T=0.322 C=0.678
Qatari Global Study-wide 216 T=0.583 C=0.417
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 76 T=0.61 C=0.39
Siberian Global Study-wide 44 T=0.32 C=0.68
The Danish reference pan genome Danish Study-wide 40 T=0.60 C=0.40
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 17 NC_000017.11:g.49486650T>A
GRCh38.p14 chr 17 NC_000017.11:g.49486650T>C
GRCh38.p14 chr 17 NC_000017.11:g.49486650T>G
GRCh37.p13 chr 17 NC_000017.10:g.47564012T>A
GRCh37.p13 chr 17 NC_000017.10:g.47564012T>C
GRCh37.p13 chr 17 NC_000017.10:g.47564012T>G
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C G
GRCh38.p14 chr 17 NC_000017.11:g.49486650= NC_000017.11:g.49486650T>A NC_000017.11:g.49486650T>C NC_000017.11:g.49486650T>G
GRCh37.p13 chr 17 NC_000017.10:g.47564012= NC_000017.10:g.47564012T>A NC_000017.10:g.47564012T>C NC_000017.10:g.47564012T>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

149 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 TSC-CSHL ss1500934 Oct 05, 2000 (86)
2 KIDDLAB ss6312613 Feb 20, 2003 (111)
3 CSHL-HAPMAP ss19357374 Feb 27, 2004 (120)
4 SSAHASNP ss21396184 Apr 05, 2004 (121)
5 PERLEGEN ss24587858 Sep 20, 2004 (123)
6 ABI ss44016897 Mar 13, 2006 (126)
7 ILLUMINA ss66729556 Nov 30, 2006 (127)
8 ILLUMINA ss66881076 Nov 30, 2006 (127)
9 ILLUMINA ss66972199 Nov 30, 2006 (127)
10 PERLEGEN ss69197311 May 17, 2007 (127)
11 ILLUMINA ss70364516 May 17, 2007 (127)
12 ILLUMINA ss70476777 May 23, 2008 (130)
13 ILLUMINA ss70999776 May 17, 2007 (127)
14 ILLUMINA ss75686698 Dec 06, 2007 (129)
15 HGSV ss77208745 Dec 06, 2007 (129)
16 KRIBB_YJKIM ss83668813 Dec 14, 2007 (130)
17 HUMANGENOME_JCVI ss96548011 Feb 04, 2009 (130)
18 BGI ss103348302 Dec 01, 2009 (131)
19 1000GENOMES ss109792617 Jan 24, 2009 (130)
20 1000GENOMES ss113588242 Jan 25, 2009 (130)
21 ILLUMINA ss121298846 Dec 01, 2009 (131)
22 ENSEMBL ss136556672 Dec 01, 2009 (131)
23 ILLUMINA ss152714707 Dec 01, 2009 (131)
24 GMI ss158071687 Dec 01, 2009 (131)
25 ILLUMINA ss159121366 Dec 01, 2009 (131)
26 ILLUMINA ss159888161 Dec 01, 2009 (131)
27 COMPLETE_GENOMICS ss168253701 Jul 04, 2010 (132)
28 ILLUMINA ss169364311 Jul 04, 2010 (132)
29 COMPLETE_GENOMICS ss169736628 Jul 04, 2010 (132)
30 ILLUMINA ss170005793 Jul 04, 2010 (132)
31 BCM-HGSC-SUB ss207879549 Jul 04, 2010 (132)
32 ILLUMINA ss209083217 Jul 04, 2010 (132)
33 1000GENOMES ss227565567 Jul 14, 2010 (132)
34 1000GENOMES ss237259262 Jul 15, 2010 (132)
35 1000GENOMES ss243551898 Jul 15, 2010 (132)
36 BL ss255666605 May 09, 2011 (134)
37 GMI ss282780714 May 04, 2012 (137)
38 PJP ss292060354 May 09, 2011 (134)
39 ILLUMINA ss479252971 May 04, 2012 (137)
40 ILLUMINA ss479255817 May 04, 2012 (137)
41 ILLUMINA ss479618524 Sep 08, 2015 (146)
42 ILLUMINA ss484427189 May 04, 2012 (137)
43 EXOME_CHIP ss491524387 May 04, 2012 (137)
44 ILLUMINA ss536600371 Sep 08, 2015 (146)
45 TISHKOFF ss565297168 Apr 25, 2013 (138)
46 SSMP ss661104964 Apr 25, 2013 (138)
47 ILLUMINA ss778686896 Aug 21, 2014 (142)
48 ILLUMINA ss780680405 Aug 21, 2014 (142)
49 ILLUMINA ss782660052 Aug 21, 2014 (142)
50 ILLUMINA ss783353682 Aug 21, 2014 (142)
51 ILLUMINA ss783629105 Aug 21, 2014 (142)
52 ILLUMINA ss825334247 Apr 01, 2015 (144)
53 ILLUMINA ss831910543 Apr 01, 2015 (144)
54 ILLUMINA ss832634091 Aug 21, 2014 (142)
55 ILLUMINA ss833224780 Aug 21, 2014 (142)
56 ILLUMINA ss834145563 Aug 21, 2014 (142)
57 EVA-GONL ss993152950 Aug 21, 2014 (142)
58 JMKIDD_LAB ss1081087111 Aug 21, 2014 (142)
59 1000GENOMES ss1358829556 Aug 21, 2014 (142)
60 DDI ss1428044711 Apr 01, 2015 (144)
61 EVA_GENOME_DK ss1578175317 Apr 01, 2015 (144)
62 EVA_UK10K_ALSPAC ss1635735821 Apr 01, 2015 (144)
63 EVA_UK10K_TWINSUK ss1678729854 Apr 01, 2015 (144)
64 EVA_DECODE ss1697195920 Apr 01, 2015 (144)
65 EVA_SVP ss1713585467 Apr 01, 2015 (144)
66 ILLUMINA ss1752228893 Sep 08, 2015 (146)
67 ILLUMINA ss1752228894 Sep 08, 2015 (146)
68 HAMMER_LAB ss1808801919 Sep 08, 2015 (146)
69 ILLUMINA ss1917919865 Feb 12, 2016 (147)
70 WEILL_CORNELL_DGM ss1936615209 Feb 12, 2016 (147)
71 ILLUMINA ss1946454143 Feb 12, 2016 (147)
72 ILLUMINA ss1959752206 Feb 12, 2016 (147)
73 GENOMED ss1968398181 Jul 19, 2016 (147)
74 JJLAB ss2029083630 Sep 14, 2016 (149)
75 ILLUMINA ss2094801441 Dec 20, 2016 (150)
76 ILLUMINA ss2095075663 Dec 20, 2016 (150)
77 USC_VALOUEV ss2157559336 Dec 20, 2016 (150)
78 HUMAN_LONGEVITY ss2217178492 Dec 20, 2016 (150)
79 SYSTEMSBIOZJU ss2629037324 Nov 08, 2017 (151)
80 ILLUMINA ss2633401693 Nov 08, 2017 (151)
81 ILLUMINA ss2633401694 Nov 08, 2017 (151)
82 GRF ss2702119194 Nov 08, 2017 (151)
83 ILLUMINA ss2710852663 Nov 08, 2017 (151)
84 GNOMAD ss2950411607 Nov 08, 2017 (151)
85 AFFY ss2985098583 Nov 08, 2017 (151)
86 AFFY ss2985733326 Nov 08, 2017 (151)
87 SWEGEN ss3015615060 Nov 08, 2017 (151)
88 BIOINF_KMB_FNS_UNIBA ss3028363603 Nov 08, 2017 (151)
89 CSHL ss3351763988 Nov 08, 2017 (151)
90 ILLUMINA ss3627679893 Oct 12, 2018 (152)
91 ILLUMINA ss3627679894 Oct 12, 2018 (152)
92 ILLUMINA ss3631382443 Oct 12, 2018 (152)
93 ILLUMINA ss3633142821 Oct 12, 2018 (152)
94 ILLUMINA ss3633850460 Oct 12, 2018 (152)
95 ILLUMINA ss3634677914 Oct 12, 2018 (152)
96 ILLUMINA ss3634677915 Oct 12, 2018 (152)
97 ILLUMINA ss3635538178 Oct 12, 2018 (152)
98 ILLUMINA ss3636367369 Oct 12, 2018 (152)
99 ILLUMINA ss3637289731 Oct 12, 2018 (152)
100 ILLUMINA ss3638164386 Oct 12, 2018 (152)
101 ILLUMINA ss3639090912 Oct 12, 2018 (152)
102 ILLUMINA ss3639552571 Oct 12, 2018 (152)
103 ILLUMINA ss3640385225 Oct 12, 2018 (152)
104 ILLUMINA ss3640385226 Oct 12, 2018 (152)
105 ILLUMINA ss3643142611 Oct 12, 2018 (152)
106 ILLUMINA ss3644690168 Oct 12, 2018 (152)
107 URBANLAB ss3650665709 Oct 12, 2018 (152)
108 ILLUMINA ss3652203182 Oct 12, 2018 (152)
109 ILLUMINA ss3653870017 Oct 12, 2018 (152)
110 EGCUT_WGS ss3682488368 Jul 13, 2019 (153)
111 EVA_DECODE ss3700558644 Jul 13, 2019 (153)
112 ACPOP ss3742065430 Jul 13, 2019 (153)
113 ILLUMINA ss3744445947 Jul 13, 2019 (153)
114 ILLUMINA ss3744978196 Jul 13, 2019 (153)
115 ILLUMINA ss3744978197 Jul 13, 2019 (153)
116 EVA ss3754720103 Jul 13, 2019 (153)
117 PAGE_CC ss3771931939 Jul 13, 2019 (153)
118 ILLUMINA ss3772476027 Jul 13, 2019 (153)
119 ILLUMINA ss3772476028 Jul 13, 2019 (153)
120 PACBIO ss3788220284 Jul 13, 2019 (153)
121 PACBIO ss3793174915 Jul 13, 2019 (153)
122 PACBIO ss3798060675 Jul 13, 2019 (153)
123 KHV_HUMAN_GENOMES ss3819987195 Jul 13, 2019 (153)
124 EVA ss3834891218 Apr 27, 2020 (154)
125 EVA ss3841057616 Apr 27, 2020 (154)
126 EVA ss3846554617 Apr 27, 2020 (154)
127 HGDP ss3847565116 Apr 27, 2020 (154)
128 SGDP_PRJ ss3885846156 Apr 27, 2020 (154)
129 KRGDB ss3935559332 Apr 27, 2020 (154)
130 EVA ss3984723964 Apr 27, 2021 (155)
131 EVA ss3985793282 Apr 27, 2021 (155)
132 EVA ss4017769276 Apr 27, 2021 (155)
133 TOPMED ss5037548817 Apr 27, 2021 (155)
134 TOMMO_GENOMICS ss5222648131 Apr 27, 2021 (155)
135 1000G_HIGH_COVERAGE ss5303295778 Oct 16, 2022 (156)
136 EVA ss5315889485 Oct 16, 2022 (156)
137 EVA ss5427877872 Oct 16, 2022 (156)
138 HUGCELL_USP ss5496326472 Oct 16, 2022 (156)
139 1000G_HIGH_COVERAGE ss5607091318 Oct 16, 2022 (156)
140 SANFORD_IMAGENETICS ss5624398254 Oct 16, 2022 (156)
141 SANFORD_IMAGENETICS ss5660192216 Oct 16, 2022 (156)
142 TOMMO_GENOMICS ss5778933324 Oct 16, 2022 (156)
143 EVA ss5799976676 Oct 16, 2022 (156)
144 YY_MCH ss5816579937 Oct 16, 2022 (156)
145 EVA ss5834047766 Oct 16, 2022 (156)
146 EVA ss5847800084 Oct 16, 2022 (156)
147 EVA ss5851824215 Oct 16, 2022 (156)
148 EVA ss5914108047 Oct 16, 2022 (156)
149 EVA ss5951580779 Oct 16, 2022 (156)
150 1000Genomes NC_000017.10 - 47564012 Oct 12, 2018 (152)
151 1000Genomes_30x NC_000017.11 - 49486650 Oct 16, 2022 (156)
152 The Avon Longitudinal Study of Parents and Children NC_000017.10 - 47564012 Oct 12, 2018 (152)
153 Genetic variation in the Estonian population NC_000017.10 - 47564012 Oct 12, 2018 (152)
154 The Danish reference pan genome NC_000017.10 - 47564012 Apr 27, 2020 (154)
155 gnomAD - Genomes NC_000017.11 - 49486650 Apr 27, 2021 (155)
156 Genome of the Netherlands Release 5 NC_000017.10 - 47564012 Apr 27, 2020 (154)
157 HGDP-CEPH-db Supplement 1 NC_000017.9 - 44919011 Apr 27, 2020 (154)
158 HapMap NC_000017.11 - 49486650 Apr 27, 2020 (154)
159 KOREAN population from KRGDB NC_000017.10 - 47564012 Apr 27, 2020 (154)
160 Northern Sweden NC_000017.10 - 47564012 Jul 13, 2019 (153)
161 The PAGE Study NC_000017.11 - 49486650 Jul 13, 2019 (153)
162 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000017.10 - 47564012 Apr 27, 2021 (155)
163 CNV burdens in cranial meningiomas NC_000017.10 - 47564012 Apr 27, 2021 (155)
164 Qatari NC_000017.10 - 47564012 Apr 27, 2020 (154)
165 SGDP_PRJ NC_000017.10 - 47564012 Apr 27, 2020 (154)
166 Siberian NC_000017.10 - 47564012 Apr 27, 2020 (154)
167 8.3KJPN NC_000017.10 - 47564012 Apr 27, 2021 (155)
168 14KJPN NC_000017.11 - 49486650 Oct 16, 2022 (156)
169 TopMed NC_000017.11 - 49486650 Apr 27, 2021 (155)
170 UK 10K study - Twins NC_000017.10 - 47564012 Oct 12, 2018 (152)
171 ALFA NC_000017.11 - 49486650 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17671059 Oct 08, 2004 (123)
rs57115633 May 23, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
42736726, ss3935559332 NC_000017.10:47564011:T:A NC_000017.11:49486649:T:A (self)
243008, ss77208745, ss109792617, ss113588242, ss159888161, ss168253701, ss169736628, ss207879549, ss209083217, ss255666605, ss282780714, ss292060354, ss479252971, ss825334247, ss1697195920, ss1713585467, ss3639090912, ss3639552571, ss3643142611, ss3847565116 NC_000017.9:44919010:T:C NC_000017.11:49486649:T:C (self)
72078221, 39942205, 28226616, 4376908, 17802118, 42736726, 15350295, 1019209, 273512, 18657131, 37863136, 10075690, 80617438, 39942205, ss227565567, ss237259262, ss243551898, ss479255817, ss479618524, ss484427189, ss491524387, ss536600371, ss565297168, ss661104964, ss778686896, ss780680405, ss782660052, ss783353682, ss783629105, ss831910543, ss832634091, ss833224780, ss834145563, ss993152950, ss1081087111, ss1358829556, ss1428044711, ss1578175317, ss1635735821, ss1678729854, ss1752228893, ss1752228894, ss1808801919, ss1917919865, ss1936615209, ss1946454143, ss1959752206, ss1968398181, ss2029083630, ss2094801441, ss2095075663, ss2157559336, ss2629037324, ss2633401693, ss2633401694, ss2702119194, ss2710852663, ss2950411607, ss2985098583, ss2985733326, ss3015615060, ss3351763988, ss3627679893, ss3627679894, ss3631382443, ss3633142821, ss3633850460, ss3634677914, ss3634677915, ss3635538178, ss3636367369, ss3637289731, ss3638164386, ss3640385225, ss3640385226, ss3644690168, ss3652203182, ss3653870017, ss3682488368, ss3742065430, ss3744445947, ss3744978196, ss3744978197, ss3754720103, ss3772476027, ss3772476028, ss3788220284, ss3793174915, ss3798060675, ss3834891218, ss3841057616, ss3885846156, ss3935559332, ss3984723964, ss3985793282, ss4017769276, ss5222648131, ss5315889485, ss5427877872, ss5624398254, ss5660192216, ss5799976676, ss5834047766, ss5847800084, ss5951580779 NC_000017.10:47564011:T:C NC_000017.11:49486649:T:C (self)
94617253, 508613064, 1495158, 1153408, 112770428, 253094479, 5532999560, ss2217178492, ss3028363603, ss3650665709, ss3700558644, ss3771931939, ss3819987195, ss3846554617, ss5037548817, ss5303295778, ss5496326472, ss5607091318, ss5778933324, ss5816579937, ss5851824215, ss5914108047 NC_000017.11:49486649:T:C NC_000017.11:49486649:T:C (self)
ss19357374, ss21396184 NT_010783.14:6217289:T:C NC_000017.11:49486649:T:C (self)
ss1500934, ss6312613, ss24587858, ss44016897, ss66729556, ss66881076, ss66972199, ss69197311, ss70364516, ss70476777, ss70999776, ss75686698, ss83668813, ss96548011, ss103348302, ss121298846, ss136556672, ss152714707, ss158071687, ss159121366, ss169364311, ss170005793 NT_010783.15:12838163:T:C NC_000017.11:49486649:T:C (self)
42736726, ss3935559332 NC_000017.10:47564011:T:G NC_000017.11:49486649:T:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs1035050
PMID Title Author Year Journal
27153397 Mechanisms and Disease Associations of Haplotype-Dependent Allele-Specific DNA Methylation. Do C et al. 2016 American journal of human genetics
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07