Name: rs10145154
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10145154

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr14:79473182 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.252144 (66740/264690, TOPMED)
T=0.257377 (36007/139900, GnomAD)
T=0.24193 (4570/18890, ALFA) (+ 14 more)
T=0.2013 (1289/6404, 1000G_30x)
T=0.1955 (979/5008, 1000G)
T=0.2391 (1071/4480, Estonian)
T=0.2021 (779/3854, ALSPAC)
T=0.2295 (851/3708, TWINSUK)
T=0.0005 (1/1832, Korea1K)
T=0.216 (216/998, GoNL)
T=0.195 (117/600, NorthernSweden)
T=0.224 (74/330, HapMap)
T=0.167 (36/216, Qatari)
C=0.412 (61/148, SGDP_PRJ)
T=0.10 (8/80, Ancient Sardinia)
T=0.23 (9/40, GENOME_DK)
C=0.45 (9/20, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: NRXN3 : Intron Variant
Publications: 2 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	18890	C=0.75807	T=0.24193
European	Sub	14286	C=0.77635	T=0.22365
African	Sub	2946	C=0.6405	T=0.3595
African Others	Sub	114	C=0.623	T=0.377
African American	Sub	2832	C=0.6412	T=0.3588
Asian	Sub	112	C=1.000	T=0.000
East Asian	Sub	86	C=1.00	T=0.00
Other Asian	Sub	26	C=1.00	T=0.00
Latin American 1	Sub	146	C=0.760	T=0.240
Latin American 2	Sub	610	C=0.792	T=0.208
South Asian	Sub	98	C=0.88	T=0.12
Other	Sub	692	C=0.795	T=0.205

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.747856	T=0.252144
gnomAD - Genomes	Global	Study-wide	139900	C=0.742623	T=0.257377
gnomAD - Genomes	European	Sub	75814	C=0.77913	T=0.22087
gnomAD - Genomes	African	Sub	41884	C=0.63573	T=0.36427
gnomAD - Genomes	American	Sub	13618	C=0.77229	T=0.22771
gnomAD - Genomes	Ashkenazi Jewish	Sub	3318	C=0.8776	T=0.1224
gnomAD - Genomes	East Asian	Sub	3124	C=0.9990	T=0.0010
gnomAD - Genomes	Other	Sub	2142	C=0.7689	T=0.2311
Allele Frequency Aggregator	Total	Global	18890	C=0.75807	T=0.24193
Allele Frequency Aggregator	European	Sub	14286	C=0.77635	T=0.22365
Allele Frequency Aggregator	African	Sub	2946	C=0.6405	T=0.3595
Allele Frequency Aggregator	Other	Sub	692	C=0.795	T=0.205
Allele Frequency Aggregator	Latin American 2	Sub	610	C=0.792	T=0.208
Allele Frequency Aggregator	Latin American 1	Sub	146	C=0.760	T=0.240
Allele Frequency Aggregator	Asian	Sub	112	C=1.000	T=0.000
Allele Frequency Aggregator	South Asian	Sub	98	C=0.88	T=0.12
1000Genomes_30x	Global	Study-wide	6404	C=0.7987	T=0.2013
1000Genomes_30x	African	Sub	1786	C=0.6081	T=0.3919
1000Genomes_30x	Europe	Sub	1266	C=0.7875	T=0.2125
1000Genomes_30x	South Asian	Sub	1202	C=0.8960	T=0.1040
1000Genomes_30x	East Asian	Sub	1170	C=0.9991	T=0.0009
1000Genomes_30x	American	Sub	980	C=0.802	T=0.198
1000Genomes	Global	Study-wide	5008	C=0.8045	T=0.1955
1000Genomes	African	Sub	1322	C=0.6029	T=0.3971
1000Genomes	East Asian	Sub	1008	C=0.9990	T=0.0010
1000Genomes	Europe	Sub	1006	C=0.7913	T=0.2087
1000Genomes	South Asian	Sub	978	C=0.894	T=0.106
1000Genomes	American	Sub	694	C=0.800	T=0.200
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.7609	T=0.2391
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.7979	T=0.2021
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.7705	T=0.2295
Korean Genome Project	KOREAN	Study-wide	1832	C=0.9995	T=0.0005
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.784	T=0.216
Northern Sweden	ACPOP	Study-wide	600	C=0.805	T=0.195
HapMap	Global	Study-wide	330	C=0.776	T=0.224
HapMap	African	Sub	120	C=0.658	T=0.342
HapMap	American	Sub	120	C=0.725	T=0.275
HapMap	Asian	Sub	90	C=1.00	T=0.00
Qatari	Global	Study-wide	216	C=0.833	T=0.167
SGDP_PRJ	Global	Study-wide	148	C=0.412	T=0.588
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	80	C=0.90	T=0.10
The Danish reference pan genome	Danish	Study-wide	40	C=0.78	T=0.23
Siberian	Global	Study-wide	20	C=0.45	T=0.55

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 14	NC_000014.9:g.79473182C>T
GRCh37.p13 chr 14	NC_000014.8:g.79939525C>T
NRXN3 RefSeqGene	NG_052991.1:g.1307810C>T

Gene: NRXN3, neurexin 3 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
NRXN3 transcript variant 3	NM_001105250.3:c.429+5780… NM_001105250.3:c.429+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 4	NM_001272020.2:c.429+5780… NM_001272020.2:c.429+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 7	NM_001330195.2:c.3444+578… NM_001330195.2:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 9	NM_001366425.1:c.3444+578… NM_001366425.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 10	NM_001366426.1:c.3456+578… NM_001366426.1:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 1	NM_004796.6:c.2325+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 2	NM_138970.5:c.429+5780C>T	N/A	Intron Variant
NRXN3 transcript variant 5	NR_073546.2:n.	N/A	Intron Variant
NRXN3 transcript variant 6	NR_073547.2:n.	N/A	Intron Variant
NRXN3 transcript variant 8	NR_158973.1:n.	N/A	Intron Variant
NRXN3 transcript variant 11	NR_158974.1:n.	N/A	Intron Variant
NRXN3 transcript variant 12	NR_158975.1:n.	N/A	Intron Variant
NRXN3 transcript variant X2	XM_005268218.4:c.3480+578… XM_005268218.4:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X3	XM_006720322.3:c.3468+578… XM_006720322.3:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X1	XM_011537363.2:c.3480+578… XM_011537363.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X4	XM_011537366.2:c.3456+578… XM_011537366.2:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X15	XM_011537368.2:c.3480+578… XM_011537368.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X16	XM_011537369.2:c.3480+578… XM_011537369.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X19	XM_011537370.2:c.3456+578… XM_011537370.2:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X27	XM_011537371.2:c.3480+578… XM_011537371.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X28	XM_011537372.2:c.3480+578… XM_011537372.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X6	XM_017021794.2:c.3444+578… XM_017021794.2:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X8	XM_017021798.2:c.3417+578… XM_017021798.2:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X10	XM_017021799.3:c.3480+578… XM_017021799.3:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X23	XM_017021800.2:c.3480+578… XM_017021800.2:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X31	XM_017021805.2:c.3444+578… XM_017021805.2:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X13	XM_024449751.2:c.3417+578… XM_024449751.2:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X44	XM_024449752.2:c.3468+578… XM_024449752.2:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X37	XM_024449753.2:c.3417+578… XM_024449753.2:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X5	XM_047431939.1:c.3456+578… XM_047431939.1:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X7	XM_047431940.1:c.3444+578… XM_047431940.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X9	XM_047431941.1:c.3417+578… XM_047431941.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X11	XM_047431942.1:c.3444+578… XM_047431942.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X12	XM_047431943.1:c.3444+578… XM_047431943.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X14	XM_047431944.1:c.3417+578… XM_047431944.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X17	XM_047431945.1:c.3468+578… XM_047431945.1:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X18	XM_047431946.1:c.3456+578… XM_047431946.1:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X20	XM_047431947.1:c.3444+578… XM_047431947.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X21	XM_047431948.1:c.3417+578… XM_047431948.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X22	XM_047431949.1:c.3417+578… XM_047431949.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X24	XM_047431950.1:c.3468+578… XM_047431950.1:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X25	XM_047431951.1:c.3468+578… XM_047431951.1:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X26	XM_047431952.1:c.3444+578… XM_047431952.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X29	XM_047431953.1:c.3456+578… XM_047431953.1:c.3456+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X30	XM_047431954.1:c.3444+578… XM_047431954.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X32	XM_047431955.1:c.3417+578… XM_047431955.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X33	XM_047431956.1:c.3417+578… XM_047431956.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X34	XM_047431957.1:c.3468+578… XM_047431957.1:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X35	XM_047431958.1:c.3444+578… XM_047431958.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X36	XM_047431959.1:c.3444+578… XM_047431959.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X38	XM_047431960.1:c.3480+578… XM_047431960.1:c.3480+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X39	XM_047431961.1:c.3468+578… XM_047431961.1:c.3468+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X40	XM_047431963.1:c.3417+578… XM_047431963.1:c.3417+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X42	XM_047431964.1:c.3444+578… XM_047431964.1:c.3444+5780C>T	N/A	Intron Variant
NRXN3 transcript variant X41	XR_001750609.1:n.	N/A	Intron Variant
NRXN3 transcript variant X43	XR_007064051.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	T
GRCh38.p14 chr 14	NC_000014.9:g.79473182=	NC_000014.9:g.79473182C>T
GRCh37.p13 chr 14	NC_000014.8:g.79939525=	NC_000014.8:g.79939525C>T
NRXN3 RefSeqGene	NG_052991.1:g.1307810=	NG_052991.1:g.1307810C>T
NRXN3 transcript variant 3	NM_001105250.2:c.429+5780=	NM_001105250.2:c.429+5780C>T
NRXN3 transcript variant 3	NM_001105250.3:c.429+5780=	NM_001105250.3:c.429+5780C>T
NRXN3 transcript variant 4	NM_001272020.1:c.429+5780=	NM_001272020.1:c.429+5780C>T
NRXN3 transcript variant 4	NM_001272020.2:c.429+5780=	NM_001272020.2:c.429+5780C>T
NRXN3 transcript variant 7	NM_001330195.2:c.3444+5780=	NM_001330195.2:c.3444+5780C>T
NRXN3 transcript variant 9	NM_001366425.1:c.3444+5780=	NM_001366425.1:c.3444+5780C>T
NRXN3 transcript variant 10	NM_001366426.1:c.3456+5780=	NM_001366426.1:c.3456+5780C>T
NRXN3 transcript variant 1	NM_004796.5:c.2325+5780=	NM_004796.5:c.2325+5780C>T
NRXN3 transcript variant 1	NM_004796.6:c.2325+5780=	NM_004796.6:c.2325+5780C>T
NRXN3 transcript variant 2	NM_138970.4:c.429+5780=	NM_138970.4:c.429+5780C>T
NRXN3 transcript variant 2	NM_138970.5:c.429+5780=	NM_138970.5:c.429+5780C>T
NRXN3 transcript variant X1	XM_005268218.1:c.3480+5780=	XM_005268218.1:c.3480+5780C>T
NRXN3 transcript variant X2	XM_005268218.4:c.3480+5780=	XM_005268218.4:c.3480+5780C>T
NRXN3 transcript variant X3	XM_006720322.3:c.3468+5780=	XM_006720322.3:c.3468+5780C>T
NRXN3 transcript variant X1	XM_011537363.2:c.3480+5780=	XM_011537363.2:c.3480+5780C>T
NRXN3 transcript variant X4	XM_011537366.2:c.3456+5780=	XM_011537366.2:c.3456+5780C>T
NRXN3 transcript variant X15	XM_011537368.2:c.3480+5780=	XM_011537368.2:c.3480+5780C>T
NRXN3 transcript variant X16	XM_011537369.2:c.3480+5780=	XM_011537369.2:c.3480+5780C>T
NRXN3 transcript variant X19	XM_011537370.2:c.3456+5780=	XM_011537370.2:c.3456+5780C>T
NRXN3 transcript variant X27	XM_011537371.2:c.3480+5780=	XM_011537371.2:c.3480+5780C>T
NRXN3 transcript variant X28	XM_011537372.2:c.3480+5780=	XM_011537372.2:c.3480+5780C>T
NRXN3 transcript variant X6	XM_017021794.2:c.3444+5780=	XM_017021794.2:c.3444+5780C>T
NRXN3 transcript variant X8	XM_017021798.2:c.3417+5780=	XM_017021798.2:c.3417+5780C>T
NRXN3 transcript variant X10	XM_017021799.3:c.3480+5780=	XM_017021799.3:c.3480+5780C>T
NRXN3 transcript variant X23	XM_017021800.2:c.3480+5780=	XM_017021800.2:c.3480+5780C>T
NRXN3 transcript variant X31	XM_017021805.2:c.3444+5780=	XM_017021805.2:c.3444+5780C>T
NRXN3 transcript variant X13	XM_024449751.2:c.3417+5780=	XM_024449751.2:c.3417+5780C>T
NRXN3 transcript variant X44	XM_024449752.2:c.3468+5780=	XM_024449752.2:c.3468+5780C>T
NRXN3 transcript variant X37	XM_024449753.2:c.3417+5780=	XM_024449753.2:c.3417+5780C>T
NRXN3 transcript variant X5	XM_047431939.1:c.3456+5780=	XM_047431939.1:c.3456+5780C>T
NRXN3 transcript variant X7	XM_047431940.1:c.3444+5780=	XM_047431940.1:c.3444+5780C>T
NRXN3 transcript variant X9	XM_047431941.1:c.3417+5780=	XM_047431941.1:c.3417+5780C>T
NRXN3 transcript variant X11	XM_047431942.1:c.3444+5780=	XM_047431942.1:c.3444+5780C>T
NRXN3 transcript variant X12	XM_047431943.1:c.3444+5780=	XM_047431943.1:c.3444+5780C>T
NRXN3 transcript variant X14	XM_047431944.1:c.3417+5780=	XM_047431944.1:c.3417+5780C>T
NRXN3 transcript variant X17	XM_047431945.1:c.3468+5780=	XM_047431945.1:c.3468+5780C>T
NRXN3 transcript variant X18	XM_047431946.1:c.3456+5780=	XM_047431946.1:c.3456+5780C>T
NRXN3 transcript variant X20	XM_047431947.1:c.3444+5780=	XM_047431947.1:c.3444+5780C>T
NRXN3 transcript variant X21	XM_047431948.1:c.3417+5780=	XM_047431948.1:c.3417+5780C>T
NRXN3 transcript variant X22	XM_047431949.1:c.3417+5780=	XM_047431949.1:c.3417+5780C>T
NRXN3 transcript variant X24	XM_047431950.1:c.3468+5780=	XM_047431950.1:c.3468+5780C>T
NRXN3 transcript variant X25	XM_047431951.1:c.3468+5780=	XM_047431951.1:c.3468+5780C>T
NRXN3 transcript variant X26	XM_047431952.1:c.3444+5780=	XM_047431952.1:c.3444+5780C>T
NRXN3 transcript variant X29	XM_047431953.1:c.3456+5780=	XM_047431953.1:c.3456+5780C>T
NRXN3 transcript variant X30	XM_047431954.1:c.3444+5780=	XM_047431954.1:c.3444+5780C>T
NRXN3 transcript variant X32	XM_047431955.1:c.3417+5780=	XM_047431955.1:c.3417+5780C>T
NRXN3 transcript variant X33	XM_047431956.1:c.3417+5780=	XM_047431956.1:c.3417+5780C>T
NRXN3 transcript variant X34	XM_047431957.1:c.3468+5780=	XM_047431957.1:c.3468+5780C>T
NRXN3 transcript variant X35	XM_047431958.1:c.3444+5780=	XM_047431958.1:c.3444+5780C>T
NRXN3 transcript variant X36	XM_047431959.1:c.3444+5780=	XM_047431959.1:c.3444+5780C>T
NRXN3 transcript variant X38	XM_047431960.1:c.3480+5780=	XM_047431960.1:c.3480+5780C>T
NRXN3 transcript variant X39	XM_047431961.1:c.3468+5780=	XM_047431961.1:c.3468+5780C>T
NRXN3 transcript variant X40	XM_047431963.1:c.3417+5780=	XM_047431963.1:c.3417+5780C>T
NRXN3 transcript variant X42	XM_047431964.1:c.3444+5780=	XM_047431964.1:c.3444+5780C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

54 SubSNP, 17 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss14004563	Dec 05, 2003 (119)
2	PERLEGEN	ss23650934	Sep 20, 2004 (123)
3	1000GENOMES	ss108486941	Jan 23, 2009 (130)
4	1000GENOMES	ss113580776	Jan 25, 2009 (130)
5	COMPLETE_GENOMICS	ss168371433	Jul 04, 2010 (132)
6	COMPLETE_GENOMICS	ss170031694	Jul 04, 2010 (132)
7	BUSHMAN	ss200307410	Jul 04, 2010 (132)
8	1000GENOMES	ss226670133	Jul 14, 2010 (132)
9	1000GENOMES	ss236616737	Jul 15, 2010 (132)
10	TISHKOFF	ss564211097	Apr 25, 2013 (138)
11	SSMP	ss659903204	Apr 25, 2013 (138)
12	EVA-GONL	ss991351666	Aug 21, 2014 (142)
13	JMKIDD_LAB	ss1079807040	Aug 21, 2014 (142)
14	1000GENOMES	ss1351777218	Aug 21, 2014 (142)
15	DDI	ss1427481270	Apr 01, 2015 (144)
16	EVA_GENOME_DK	ss1577374442	Apr 01, 2015 (144)
17	EVA_UK10K_ALSPAC	ss1632153837	Apr 01, 2015 (144)
18	EVA_UK10K_TWINSUK	ss1675147870	Apr 01, 2015 (144)
19	EVA_DECODE	ss1695358117	Apr 01, 2015 (144)
20	HAMMER_LAB	ss1808003847	Sep 08, 2015 (146)
21	WEILL_CORNELL_DGM	ss1934723042	Feb 12, 2016 (147)
22	GENOMED	ss1968007226	Jul 19, 2016 (147)
23	JJLAB	ss2028143589	Sep 14, 2016 (149)
24	CSHL	ss2136813963	Nov 08, 2017 (151)
25	USC_VALOUEV	ss2156522256	Dec 20, 2016 (150)
26	HUMAN_LONGEVITY	ss2203584543	Dec 20, 2016 (150)
27	GNOMAD	ss2929896677	Nov 08, 2017 (151)
28	SWEGEN	ss3012518839	Nov 08, 2017 (151)
29	BIOINF_KMB_FNS_UNIBA	ss3027897185	Nov 08, 2017 (151)
30	CSHL	ss3350896771	Nov 08, 2017 (151)
31	EGCUT_WGS	ss3679775860	Jul 13, 2019 (153)
32	EVA_DECODE	ss3697066587	Jul 13, 2019 (153)
33	ACPOP	ss3740554489	Jul 13, 2019 (153)
34	EVA	ss3752562182	Jul 13, 2019 (153)
35	PACBIO	ss3787720335	Jul 13, 2019 (153)
36	PACBIO	ss3792749890	Jul 13, 2019 (153)
37	PACBIO	ss3797634283	Jul 13, 2019 (153)
38	KHV_HUMAN_GENOMES	ss3817888043	Jul 13, 2019 (153)
39	EVA	ss3834020045	Apr 27, 2020 (154)
40	EVA	ss3840600805	Apr 27, 2020 (154)
41	EVA	ss3846090600	Apr 27, 2020 (154)
42	SGDP_PRJ	ss3881911580	Apr 27, 2020 (154)
43	KOGIC	ss3975323492	Apr 27, 2020 (154)
44	EVA	ss3985691915	Apr 27, 2021 (155)
45	TOPMED	ss4977319430	Apr 27, 2021 (155)
46	1000G_HIGH_COVERAGE	ss5296903166	Oct 17, 2022 (156)
47	EVA	ss5416494836	Oct 17, 2022 (156)
48	HUGCELL_USP	ss5490881590	Oct 17, 2022 (156)
49	1000G_HIGH_COVERAGE	ss5597519023	Oct 17, 2022 (156)
50	SANFORD_IMAGENETICS	ss5624349144	Oct 17, 2022 (156)
51	SANFORD_IMAGENETICS	ss5656604846	Oct 17, 2022 (156)
52	EVA	ss5841379449	Oct 17, 2022 (156)
53	EVA	ss5902122692	Oct 17, 2022 (156)
54	EVA	ss5948057750	Oct 17, 2022 (156)
55	1000Genomes	NC_000014.8 - 79939525	Oct 12, 2018 (152)
56	1000Genomes_30x	NC_000014.9 - 79473182	Oct 17, 2022 (156)
57	The Avon Longitudinal Study of Parents and Children	NC_000014.8 - 79939525	Oct 12, 2018 (152)
58	Genetic variation in the Estonian population	NC_000014.8 - 79939525	Oct 12, 2018 (152)
59	The Danish reference pan genome	NC_000014.8 - 79939525	Apr 27, 2020 (154)
60	gnomAD - Genomes	NC_000014.9 - 79473182	Apr 27, 2021 (155)
61	Genome of the Netherlands Release 5	NC_000014.8 - 79939525	Apr 27, 2020 (154)
62	HapMap	NC_000014.9 - 79473182	Apr 27, 2020 (154)
63	Korean Genome Project	NC_000014.9 - 79473182	Apr 27, 2020 (154)
64	Northern Sweden	NC_000014.8 - 79939525	Jul 13, 2019 (153)
65	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000014.8 - 79939525	Apr 27, 2021 (155)
66	Qatari	NC_000014.8 - 79939525	Apr 27, 2020 (154)
67	SGDP_PRJ	NC_000014.8 - 79939525	Apr 27, 2020 (154)
68	Siberian	NC_000014.8 - 79939525	Apr 27, 2020 (154)
69	TopMed	NC_000014.9 - 79473182	Apr 27, 2021 (155)
70	UK 10K study - Twins	NC_000014.8 - 79939525	Oct 12, 2018 (152)
71	ALFA	NC_000014.9 - 79473182	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss108486941, ss113580776, ss168371433, ss170031694, ss200307410, ss1695358117, ss2136813963	NC_000014.7:79009277:C:T	NC_000014.9:79473181:C:T	(self)
64787280, 36005465, 25514108, 3683899, 16076890, 13839354, 917842, 16764972, 33928560, 9038610, 36005465, ss226670133, ss236616737, ss564211097, ss659903204, ss991351666, ss1079807040, ss1351777218, ss1427481270, ss1577374442, ss1632153837, ss1675147870, ss1808003847, ss1934723042, ss1968007226, ss2028143589, ss2156522256, ss2929896677, ss3012518839, ss3350896771, ss3679775860, ss3740554489, ss3752562182, ss3787720335, ss3792749890, ss3797634283, ss3834020045, ss3840600805, ss3881911580, ss3985691915, ss5416494836, ss5624349144, ss5656604846, ss5841379449, ss5948057750	NC_000014.8:79939524:C:T	NC_000014.9:79473181:C:T	(self)
85044958, 456781708, 1183480, 31701493, 192865089, 6002102258, ss2203584543, ss3027897185, ss3697066587, ss3817888043, ss3846090600, ss3975323492, ss4977319430, ss5296903166, ss5490881590, ss5597519023, ss5902122692	NC_000014.9:79473181:C:T	NC_000014.9:79473181:C:T	(self)
ss14004563	NT_026437.10:59859565:C:T	NC_000014.9:79473181:C:T	(self)
ss23650934	NT_026437.12:60939524:C:T	NC_000014.9:79473181:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

2 citations for rs10145154

PMID	Title	Author	Year	Journal
26800887	Association of common variants identified by recent genome-wide association studies with obesity in Chinese children: a case-control study.	Wang HJ et al.	2016	BMC medical genetics
31884074	Circulating Levels of Insulin-like Growth Factor 1 and Insulin-like Growth Factor Binding Protein 3 Associate With Risk of Colorectal Cancer Based on Serologic and Mendelian Randomization Analyses.	Murphy N et al.	2020	Gastroenterology

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10145154