Name: rs9965837
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs9965837

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr18:79356485 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>C
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.488198 (129221/264690, TOPMED)
T=0.492958 (69018/140008, GnomAD)
C=0.48589 (22658/46632, ALFA) (+ 17 more)
T=0.31970 (9034/28258, 14KJPN)
T=0.32023 (5367/16760, 8.3KJPN)
T=0.4539 (2907/6404, 1000G_30x)
T=0.4523 (2265/5008, 1000G)
T=0.4984 (2233/4480, Estonian)
C=0.4626 (1783/3854, ALSPAC)
C=0.4631 (1717/3708, TWINSUK)
T=0.2962 (868/2930, KOREAN)
T=0.3084 (565/1832, Korea1K)
C=0.464 (463/998, GoNL)
C=0.433 (260/600, NorthernSweden)
T=0.305 (139/456, SGDP_PRJ)
T=0.448 (147/328, HapMap)
T=0.454 (98/216, Qatari)
T=0.278 (60/216, Vietnamese)
T=0.38 (20/52, Siberian)
C=0.38 (15/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: ATP9B : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	46632	T=0.51411	C=0.48589
European	Sub	32392	T=0.53041	C=0.46959
African	Sub	4938	T=0.4166	C=0.5834
African Others	Sub	180	T=0.394	C=0.606
African American	Sub	4758	T=0.4174	C=0.5826
Asian	Sub	438	T=0.333	C=0.667
East Asian	Sub	372	T=0.312	C=0.688
Other Asian	Sub	66	T=0.45	C=0.55
Latin American 1	Sub	574	T=0.537	C=0.463
Latin American 2	Sub	4882	T=0.5107	C=0.4893
South Asian	Sub	162	T=0.500	C=0.500
Other	Sub	3246	T=0.5262	C=0.4738

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.488198	C=0.511802
gnomAD - Genomes	Global	Study-wide	140008	T=0.492958	C=0.507042
gnomAD - Genomes	European	Sub	75854	T=0.53445	C=0.46555
gnomAD - Genomes	African	Sub	41916	T=0.42502	C=0.57498
gnomAD - Genomes	American	Sub	13648	T=0.51744	C=0.48256
gnomAD - Genomes	Ashkenazi Jewish	Sub	3320	T=0.4904	C=0.5096
gnomAD - Genomes	East Asian	Sub	3122	T=0.2867	C=0.7133
gnomAD - Genomes	Other	Sub	2148	T=0.5019	C=0.4981
Allele Frequency Aggregator	Total	Global	46632	T=0.51411	C=0.48589
Allele Frequency Aggregator	European	Sub	32392	T=0.53041	C=0.46959
Allele Frequency Aggregator	African	Sub	4938	T=0.4166	C=0.5834
Allele Frequency Aggregator	Latin American 2	Sub	4882	T=0.5107	C=0.4893
Allele Frequency Aggregator	Other	Sub	3246	T=0.5262	C=0.4738
Allele Frequency Aggregator	Latin American 1	Sub	574	T=0.537	C=0.463
Allele Frequency Aggregator	Asian	Sub	438	T=0.333	C=0.667
Allele Frequency Aggregator	South Asian	Sub	162	T=0.500	C=0.500
14KJPN	JAPANESE	Study-wide	28258	T=0.31970	C=0.68030
8.3KJPN	JAPANESE	Study-wide	16760	T=0.32023	C=0.67977
1000Genomes_30x	Global	Study-wide	6404	T=0.4539	C=0.5461
1000Genomes_30x	African	Sub	1786	T=0.3936	C=0.6064
1000Genomes_30x	Europe	Sub	1266	T=0.5837	C=0.4163
1000Genomes_30x	South Asian	Sub	1202	T=0.4359	C=0.5641
1000Genomes_30x	East Asian	Sub	1170	T=0.3590	C=0.6410
1000Genomes_30x	American	Sub	980	T=0.532	C=0.468
1000Genomes	Global	Study-wide	5008	T=0.4523	C=0.5477
1000Genomes	African	Sub	1322	T=0.3956	C=0.6044
1000Genomes	East Asian	Sub	1008	T=0.3522	C=0.6478
1000Genomes	Europe	Sub	1006	T=0.5755	C=0.4245
1000Genomes	South Asian	Sub	978	T=0.451	C=0.549
1000Genomes	American	Sub	694	T=0.529	C=0.471
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.4984	C=0.5016
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.5374	C=0.4626
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.5369	C=0.4631
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.2962	C=0.7038
Korean Genome Project	KOREAN	Study-wide	1832	T=0.3084	C=0.6916
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.536	C=0.464
Northern Sweden	ACPOP	Study-wide	600	T=0.567	C=0.433
SGDP_PRJ	Global	Study-wide	456	T=0.305	C=0.695
HapMap	Global	Study-wide	328	T=0.448	C=0.552
HapMap	African	Sub	120	T=0.367	C=0.633
HapMap	American	Sub	120	T=0.592	C=0.408
HapMap	Asian	Sub	88	T=0.36	C=0.64
Qatari	Global	Study-wide	216	T=0.454	C=0.546
A Vietnamese Genetic Variation Database	Global	Study-wide	216	T=0.278	C=0.722
Siberian	Global	Study-wide	52	T=0.38	C=0.62
The Danish reference pan genome	Danish	Study-wide	40	T=0.62	C=0.38

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 18	NC_000018.10:g.79356485T>C
GRCh37.p13 chr 18	NC_000018.9:g.77116485T>C

Gene: ATP9B, ATPase phospholipid transporting 9B (putative) (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ATP9B transcript variant 2	NM_001306085.2:c.2904-286… NM_001306085.2:c.2904-2869T>C	N/A	Intron Variant
ATP9B transcript variant 1	NM_198531.5:c.2904-2869T>C	N/A	Intron Variant
ATP9B transcript variant 3	NR_148360.2:n.	N/A	Intron Variant
ATP9B transcript variant X1	XM_011525963.3:c.2985-286… XM_011525963.3:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X2	XM_011525964.3:c.2982-286… XM_011525964.3:c.2982-2869T>C	N/A	Intron Variant
ATP9B transcript variant X10	XM_011525966.3:c.2865-286… XM_011525966.3:c.2865-2869T>C	N/A	Intron Variant
ATP9B transcript variant X28	XM_011525971.3:c.2382-286… XM_011525971.3:c.2382-2869T>C	N/A	Intron Variant
ATP9B transcript variant X29	XM_011525972.3:c.2235-286… XM_011525972.3:c.2235-2869T>C	N/A	Intron Variant
ATP9B transcript variant X30	XM_011525973.3:c.2112-286… XM_011525973.3:c.2112-2869T>C	N/A	Intron Variant
ATP9B transcript variant X31	XM_011525974.3:c.2064-286… XM_011525974.3:c.2064-2869T>C	N/A	Intron Variant
ATP9B transcript variant X3	XM_017025726.2:c.2985-286… XM_017025726.2:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X4	XM_017025727.2:c.2985-286… XM_017025727.2:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X6	XM_017025728.3:c.2907-286… XM_017025728.3:c.2907-2869T>C	N/A	Intron Variant
ATP9B transcript variant X7	XM_017025729.2:c.2985-286… XM_017025729.2:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X8	XM_017025730.2:c.2907-286… XM_017025730.2:c.2907-2869T>C	N/A	Intron Variant
ATP9B transcript variant X11	XM_017025731.2:c.2920-286… XM_017025731.2:c.2920-2869T>C	N/A	Intron Variant
ATP9B transcript variant X13	XM_017025732.2:c.2842-286… XM_017025732.2:c.2842-2869T>C	N/A	Intron Variant
ATP9B transcript variant X16	XM_017025733.2:c.2842-286… XM_017025733.2:c.2842-2869T>C	N/A	Intron Variant
ATP9B transcript variant X18	XM_017025734.2:c.2920-286… XM_017025734.2:c.2920-2869T>C	N/A	Intron Variant
ATP9B transcript variant X19	XM_017025735.3:c.2920-286… XM_017025735.3:c.2920-2869T>C	N/A	Intron Variant
ATP9B transcript variant X21	XM_017025736.3:c.2985-286… XM_017025736.3:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X24	XM_017025737.2:c.2985-286… XM_017025737.2:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X5	XM_047437489.1:c.2982-286… XM_047437489.1:c.2982-2869T>C	N/A	Intron Variant
ATP9B transcript variant X9	XM_047437490.1:c.2865-286… XM_047437490.1:c.2865-2869T>C	N/A	Intron Variant
ATP9B transcript variant X12	XM_047437491.1:c.2787-286… XM_047437491.1:c.2787-2869T>C	N/A	Intron Variant
ATP9B transcript variant X14	XM_047437492.1:c.2839-286… XM_047437492.1:c.2839-2869T>C	N/A	Intron Variant
ATP9B transcript variant X15	XM_047437493.1:c.2787-286… XM_047437493.1:c.2787-2869T>C	N/A	Intron Variant
ATP9B transcript variant X17	XM_047437494.1:c.2839-286… XM_047437494.1:c.2839-2869T>C	N/A	Intron Variant
ATP9B transcript variant X20	XM_047437495.1:c.2985-286… XM_047437495.1:c.2985-2869T>C	N/A	Intron Variant
ATP9B transcript variant X22	XM_047437496.1:c.2920-286… XM_047437496.1:c.2920-2869T>C	N/A	Intron Variant
ATP9B transcript variant X23	XM_047437497.1:c.2839-286… XM_047437497.1:c.2839-2869T>C	N/A	Intron Variant
ATP9B transcript variant X25	XM_047437498.1:c.2982-286… XM_047437498.1:c.2982-2869T>C	N/A	Intron Variant
ATP9B transcript variant X26	XM_047437499.1:c.2904-286… XM_047437499.1:c.2904-2869T>C	N/A	Intron Variant
ATP9B transcript variant X27	XM_047437500.1:c.2904-286… XM_047437500.1:c.2904-2869T>C	N/A	Intron Variant
ATP9B transcript variant X32	XM_047437501.1:c.1800-286… XM_047437501.1:c.1800-2869T>C	N/A	Intron Variant
ATP9B transcript variant X33	XM_047437502.1:c.1695-286… XM_047437502.1:c.1695-2869T>C	N/A	Intron Variant
ATP9B transcript variant X34	XM_017025742.2:c.	N/A	Genic Downstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	C
GRCh38.p14 chr 18	NC_000018.10:g.79356485=	NC_000018.10:g.79356485T>C
GRCh37.p13 chr 18	NC_000018.9:g.77116485=	NC_000018.9:g.77116485T>C
ATP9B transcript variant 2	NM_001306085.2:c.2904-2869=	NM_001306085.2:c.2904-2869T>C
ATP9B transcript	NM_198531.3:c.2904-2869=	NM_198531.3:c.2904-2869T>C
ATP9B transcript variant 1	NM_198531.5:c.2904-2869=	NM_198531.5:c.2904-2869T>C
ATP9B transcript variant X1	XM_005266690.1:c.2904-2869=	XM_005266690.1:c.2904-2869T>C
ATP9B transcript variant X10	XM_005266691.1:c.2904-2869=	XM_005266691.1:c.2904-2869T>C
ATP9B transcript variant X3	XM_005266692.1:c.2904-2869=	XM_005266692.1:c.2904-2869T>C
ATP9B transcript variant X4	XM_005266693.1:c.2839-2869=	XM_005266693.1:c.2839-2869T>C
ATP9B transcript variant X5	XM_005266694.1:c.2904-2869=	XM_005266694.1:c.2904-2869T>C
ATP9B transcript variant X6	XM_005266695.1:c.2904-2869=	XM_005266695.1:c.2904-2869T>C
ATP9B transcript variant X7	XM_005266696.1:c.1824-2869=	XM_005266696.1:c.1824-2869T>C
ATP9B transcript variant X1	XM_011525963.3:c.2985-2869=	XM_011525963.3:c.2985-2869T>C
ATP9B transcript variant X2	XM_011525964.3:c.2982-2869=	XM_011525964.3:c.2982-2869T>C
ATP9B transcript variant X10	XM_011525966.3:c.2865-2869=	XM_011525966.3:c.2865-2869T>C
ATP9B transcript variant X28	XM_011525971.3:c.2382-2869=	XM_011525971.3:c.2382-2869T>C
ATP9B transcript variant X29	XM_011525972.3:c.2235-2869=	XM_011525972.3:c.2235-2869T>C
ATP9B transcript variant X30	XM_011525973.3:c.2112-2869=	XM_011525973.3:c.2112-2869T>C
ATP9B transcript variant X31	XM_011525974.3:c.2064-2869=	XM_011525974.3:c.2064-2869T>C
ATP9B transcript variant X3	XM_017025726.2:c.2985-2869=	XM_017025726.2:c.2985-2869T>C
ATP9B transcript variant X4	XM_017025727.2:c.2985-2869=	XM_017025727.2:c.2985-2869T>C
ATP9B transcript variant X6	XM_017025728.3:c.2907-2869=	XM_017025728.3:c.2907-2869T>C
ATP9B transcript variant X7	XM_017025729.2:c.2985-2869=	XM_017025729.2:c.2985-2869T>C
ATP9B transcript variant X8	XM_017025730.2:c.2907-2869=	XM_017025730.2:c.2907-2869T>C
ATP9B transcript variant X11	XM_017025731.2:c.2920-2869=	XM_017025731.2:c.2920-2869T>C
ATP9B transcript variant X13	XM_017025732.2:c.2842-2869=	XM_017025732.2:c.2842-2869T>C
ATP9B transcript variant X16	XM_017025733.2:c.2842-2869=	XM_017025733.2:c.2842-2869T>C
ATP9B transcript variant X18	XM_017025734.2:c.2920-2869=	XM_017025734.2:c.2920-2869T>C
ATP9B transcript variant X19	XM_017025735.3:c.2920-2869=	XM_017025735.3:c.2920-2869T>C
ATP9B transcript variant X21	XM_017025736.3:c.2985-2869=	XM_017025736.3:c.2985-2869T>C
ATP9B transcript variant X24	XM_017025737.2:c.2985-2869=	XM_017025737.2:c.2985-2869T>C
ATP9B transcript variant X5	XM_047437489.1:c.2982-2869=	XM_047437489.1:c.2982-2869T>C
ATP9B transcript variant X9	XM_047437490.1:c.2865-2869=	XM_047437490.1:c.2865-2869T>C
ATP9B transcript variant X12	XM_047437491.1:c.2787-2869=	XM_047437491.1:c.2787-2869T>C
ATP9B transcript variant X14	XM_047437492.1:c.2839-2869=	XM_047437492.1:c.2839-2869T>C
ATP9B transcript variant X15	XM_047437493.1:c.2787-2869=	XM_047437493.1:c.2787-2869T>C
ATP9B transcript variant X17	XM_047437494.1:c.2839-2869=	XM_047437494.1:c.2839-2869T>C
ATP9B transcript variant X20	XM_047437495.1:c.2985-2869=	XM_047437495.1:c.2985-2869T>C
ATP9B transcript variant X22	XM_047437496.1:c.2920-2869=	XM_047437496.1:c.2920-2869T>C
ATP9B transcript variant X23	XM_047437497.1:c.2839-2869=	XM_047437497.1:c.2839-2869T>C
ATP9B transcript variant X25	XM_047437498.1:c.2982-2869=	XM_047437498.1:c.2982-2869T>C
ATP9B transcript variant X26	XM_047437499.1:c.2904-2869=	XM_047437499.1:c.2904-2869T>C
ATP9B transcript variant X27	XM_047437500.1:c.2904-2869=	XM_047437500.1:c.2904-2869T>C
ATP9B transcript variant X32	XM_047437501.1:c.1800-2869=	XM_047437501.1:c.1800-2869T>C
ATP9B transcript variant X33	XM_047437502.1:c.1695-2869=	XM_047437502.1:c.1695-2869T>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

66 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss13806580	Dec 05, 2003 (119)
2	CSHL-HAPMAP	ss16783946	Feb 27, 2004 (120)
3	BCMHGSC_JDW	ss90873382	Mar 24, 2008 (129)
4	BGI	ss106040656	Feb 04, 2009 (130)
5	1000GENOMES	ss110948859	Jan 25, 2009 (130)
6	ILLUMINA-UK	ss117962384	Feb 14, 2009 (130)
7	ENSEMBL	ss137503549	Dec 01, 2009 (131)
8	ILLUMINA	ss161029440	Dec 01, 2009 (131)
9	ENSEMBL	ss161867603	Dec 01, 2009 (131)
10	COMPLETE_GENOMICS	ss172063174	Jul 04, 2010 (132)
11	BUSHMAN	ss203556777	Jul 04, 2010 (132)
12	BCM-HGSC-SUB	ss208072078	Jul 04, 2010 (132)
13	1000GENOMES	ss211925282	Jul 14, 2010 (132)
14	1000GENOMES	ss227997300	Jul 14, 2010 (132)
15	1000GENOMES	ss237569347	Jul 15, 2010 (132)
16	1000GENOMES	ss243798200	Jul 15, 2010 (132)
17	GMI	ss283088957	May 04, 2012 (137)
18	PJP	ss292118429	May 09, 2011 (134)
19	ILLUMINA	ss483016362	Sep 08, 2015 (146)
20	SSMP	ss661642102	Apr 25, 2013 (138)
21	EVA-GONL	ss993987356	Aug 21, 2014 (142)
22	JMKIDD_LAB	ss1081697209	Aug 21, 2014 (142)
23	1000GENOMES	ss1361967968	Aug 21, 2014 (142)
24	DDI	ss1428303058	Apr 01, 2015 (144)
25	EVA_GENOME_DK	ss1578515609	Apr 01, 2015 (144)
26	EVA_UK10K_ALSPAC	ss1637389105	Apr 01, 2015 (144)
27	EVA_UK10K_TWINSUK	ss1680383138	Apr 01, 2015 (144)
28	EVA_DECODE	ss1698051505	Apr 01, 2015 (144)
29	HAMMER_LAB	ss1809163041	Sep 08, 2015 (146)
30	WEILL_CORNELL_DGM	ss1937459149	Feb 12, 2016 (147)
31	GENOMED	ss1968589012	Jul 19, 2016 (147)
32	JJLAB	ss2029506450	Sep 14, 2016 (149)
33	USC_VALOUEV	ss2158014530	Dec 20, 2016 (150)
34	HUMAN_LONGEVITY	ss2223514295	Dec 20, 2016 (150)
35	SYSTEMSBIOZJU	ss2629252015	Nov 08, 2017 (151)
36	GRF	ss2702617131	Nov 08, 2017 (151)
37	GNOMAD	ss2959308770	Nov 08, 2017 (151)
38	SWEGEN	ss3016916213	Nov 08, 2017 (151)
39	BIOINF_KMB_FNS_UNIBA	ss3028585735	Nov 08, 2017 (151)
40	CSHL	ss3352145831	Nov 08, 2017 (151)
41	ILLUMINA	ss3636407991	Oct 12, 2018 (152)
42	EGCUT_WGS	ss3683771255	Jul 13, 2019 (153)
43	EVA_DECODE	ss3702133171	Jul 13, 2019 (153)
44	ACPOP	ss3742764791	Jul 13, 2019 (153)
45	EVA	ss3755692485	Jul 13, 2019 (153)
46	KHV_HUMAN_GENOMES	ss3820948018	Jul 13, 2019 (153)
47	EVA	ss3835298276	Apr 27, 2020 (154)
48	EVA	ss3841271731	Apr 27, 2020 (154)
49	EVA	ss3846775314	Apr 27, 2020 (154)
50	SGDP_PRJ	ss3887526204	Apr 27, 2020 (154)
51	KRGDB	ss3937437786	Apr 27, 2020 (154)
52	KOGIC	ss3980594633	Apr 27, 2020 (154)
53	TOPMED	ss5064829389	Apr 27, 2021 (155)
54	TOMMO_GENOMICS	ss5226226277	Apr 27, 2021 (155)
55	1000G_HIGH_COVERAGE	ss5306120262	Oct 16, 2022 (156)
56	EVA	ss5432939847	Oct 16, 2022 (156)
57	HUGCELL_USP	ss5498811200	Oct 16, 2022 (156)
58	EVA	ss5512024414	Oct 16, 2022 (156)
59	1000G_HIGH_COVERAGE	ss5611379442	Oct 16, 2022 (156)
60	SANFORD_IMAGENETICS	ss5661776543	Oct 16, 2022 (156)
61	TOMMO_GENOMICS	ss5784318490	Oct 16, 2022 (156)
62	YY_MCH	ss5817313938	Oct 16, 2022 (156)
63	EVA	ss5827881576	Oct 16, 2022 (156)
64	EVA	ss5852165274	Oct 16, 2022 (156)
65	EVA	ss5875037772	Oct 16, 2022 (156)
66	EVA	ss5953212431	Oct 16, 2022 (156)
67	1000Genomes	NC_000018.9 - 77116485	Oct 12, 2018 (152)
68	1000Genomes_30x	NC_000018.10 - 79356485	Oct 16, 2022 (156)
69	The Avon Longitudinal Study of Parents and Children	NC_000018.9 - 77116485	Oct 12, 2018 (152)
70	Genetic variation in the Estonian population	NC_000018.9 - 77116485	Oct 12, 2018 (152)
71	The Danish reference pan genome	NC_000018.9 - 77116485	Apr 27, 2020 (154)
72	gnomAD - Genomes	NC_000018.10 - 79356485	Apr 27, 2021 (155)
73	Genome of the Netherlands Release 5	NC_000018.9 - 77116485	Apr 27, 2020 (154)
74	HapMap	NC_000018.10 - 79356485	Apr 27, 2020 (154)
75	KOREAN population from KRGDB	NC_000018.9 - 77116485	Apr 27, 2020 (154)
76	Korean Genome Project	NC_000018.10 - 79356485	Apr 27, 2020 (154)
77	Northern Sweden	NC_000018.9 - 77116485	Jul 13, 2019 (153)
78	Qatari	NC_000018.9 - 77116485	Apr 27, 2020 (154)
79	SGDP_PRJ	NC_000018.9 - 77116485	Apr 27, 2020 (154)
80	Siberian	NC_000018.9 - 77116485	Apr 27, 2020 (154)
81	8.3KJPN	NC_000018.9 - 77116485	Apr 27, 2021 (155)
82	14KJPN	NC_000018.10 - 79356485	Oct 16, 2022 (156)
83	TopMed	NC_000018.10 - 79356485	Apr 27, 2021 (155)
84	UK 10K study - Twins	NC_000018.9 - 77116485	Oct 12, 2018 (152)
85	A Vietnamese Genetic Variation Database	NC_000018.9 - 77116485	Jul 13, 2019 (153)
86	ALFA	NC_000018.10 - 79356485	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss90873382, ss110948859, ss117962384, ss172063174, ss203556777, ss208072078, ss211925282, ss283088957, ss292118429, ss1698051505	NC_000018.8:75217472:T:C	NC_000018.10:79356484:T:C	(self)
75331133, 41763626, 29509503, 4703168, 18608686, 44615180, 16049656, 19501071, 39543184, 10530884, 84195584, 41763626, 9236515, ss227997300, ss237569347, ss243798200, ss483016362, ss661642102, ss993987356, ss1081697209, ss1361967968, ss1428303058, ss1578515609, ss1637389105, ss1680383138, ss1809163041, ss1937459149, ss1968589012, ss2029506450, ss2158014530, ss2629252015, ss2702617131, ss2959308770, ss3016916213, ss3352145831, ss3636407991, ss3683771255, ss3742764791, ss3755692485, ss3835298276, ss3841271731, ss3887526204, ss3937437786, ss5226226277, ss5432939847, ss5512024414, ss5661776543, ss5827881576, ss5953212431	NC_000018.9:77116484:T:C	NC_000018.10:79356484:T:C	(self)
98905377, 531227794, 1656212, 36972634, 118155594, 280375052, 12461957695, ss2223514295, ss3028585735, ss3702133171, ss3820948018, ss3846775314, ss3980594633, ss5064829389, ss5306120262, ss5498811200, ss5611379442, ss5784318490, ss5817313938, ss5852165274, ss5875037772	NC_000018.10:79356484:T:C	NC_000018.10:79356484:T:C	(self)
ss13806580, ss16783946	NT_010879.14:1344664:T:C	NC_000018.10:79356484:T:C	(self)
ss106040656, ss137503549, ss161029440, ss161867603	NT_025028.14:24907348:T:C	NC_000018.10:79356484:T:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs9965837

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs9965837