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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs8036718

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr15:27808411 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.247837 (65600/264690, TOPMED)
A=0.335588 (62624/186610, ALFA)
A=0.278154 (38986/140160, GnomAD) (+ 19 more)
A=0.00039 (11/28258, 14KJPN)
A=0.00042 (7/16760, 8.3KJPN)
A=0.1543 (988/6404, 1000G_30x)
A=0.1506 (754/5008, 1000G)
A=0.4623 (2071/4480, Estonian)
A=0.3876 (1494/3854, ALSPAC)
A=0.3811 (1413/3708, TWINSUK)
A=0.0017 (5/2928, KOREAN)
A=0.1236 (257/2080, HGDP_Stanford)
A=0.0000 (0/1832, Korea1K)
A=0.1537 (252/1640, HapMap)
A=0.426 (425/998, GoNL)
A=0.438 (263/600, NorthernSweden)
A=0.096 (52/542, SGDP_PRJ)
A=0.125 (27/216, Qatari)
A=0.000 (0/212, Vietnamese)
A=0.11 (10/90, Ancient Sardinia)
A=0.15 (8/54, Siberian)
A=0.38 (15/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
OCA2 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 186610 A=0.335588 G=0.664412
European Sub 164326 A=0.355622 G=0.644378
African Sub 7062 A=0.1399 G=0.8601
African Others Sub 264 A=0.102 G=0.898
African American Sub 6798 A=0.1414 G=0.8586
Asian Sub 700 A=0.006 G=0.994
East Asian Sub 554 A=0.005 G=0.995
Other Asian Sub 146 A=0.007 G=0.993
Latin American 1 Sub 778 A=0.252 G=0.748
Latin American 2 Sub 2824 A=0.2057 G=0.7943
South Asian Sub 5042 A=0.1341 G=0.8659
Other Sub 5878 A=0.2962 G=0.7038


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.247837 G=0.752163
Allele Frequency Aggregator Total Global 186610 A=0.335588 G=0.664412
Allele Frequency Aggregator European Sub 164326 A=0.355622 G=0.644378
Allele Frequency Aggregator African Sub 7062 A=0.1399 G=0.8601
Allele Frequency Aggregator Other Sub 5878 A=0.2962 G=0.7038
Allele Frequency Aggregator South Asian Sub 5042 A=0.1341 G=0.8659
Allele Frequency Aggregator Latin American 2 Sub 2824 A=0.2057 G=0.7943
Allele Frequency Aggregator Latin American 1 Sub 778 A=0.252 G=0.748
Allele Frequency Aggregator Asian Sub 700 A=0.006 G=0.994
gnomAD - Genomes Global Study-wide 140160 A=0.278154 G=0.721846
gnomAD - Genomes European Sub 75872 A=0.38564 G=0.61436
gnomAD - Genomes African Sub 42032 A=0.13414 G=0.86586
gnomAD - Genomes American Sub 13644 A=0.20449 G=0.79551
gnomAD - Genomes Ashkenazi Jewish Sub 3324 A=0.2377 G=0.7623
gnomAD - Genomes East Asian Sub 3134 A=0.0010 G=0.9990
gnomAD - Genomes Other Sub 2154 A=0.2349 G=0.7651
14KJPN JAPANESE Study-wide 28258 A=0.00039 G=0.99961
8.3KJPN JAPANESE Study-wide 16760 A=0.00042 G=0.99958
1000Genomes_30x Global Study-wide 6404 A=0.1543 G=0.8457
1000Genomes_30x African Sub 1786 A=0.1165 G=0.8835
1000Genomes_30x Europe Sub 1266 A=0.3460 G=0.6540
1000Genomes_30x South Asian Sub 1202 A=0.1040 G=0.8960
1000Genomes_30x East Asian Sub 1170 A=0.0026 G=0.9974
1000Genomes_30x American Sub 980 A=0.218 G=0.782
1000Genomes Global Study-wide 5008 A=0.1506 G=0.8494
1000Genomes African Sub 1322 A=0.1172 G=0.8828
1000Genomes East Asian Sub 1008 A=0.0030 G=0.9970
1000Genomes Europe Sub 1006 A=0.3499 G=0.6501
1000Genomes South Asian Sub 978 A=0.100 G=0.900
1000Genomes American Sub 694 A=0.210 G=0.790
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.4623 G=0.5377
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.3876 G=0.6124
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.3811 G=0.6189
KOREAN population from KRGDB KOREAN Study-wide 2928 A=0.0017 C=0.0000, G=0.9983, T=0.0000
HGDP-CEPH-db Supplement 1 Global Study-wide 2080 A=0.1236 G=0.8764
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.009 G=0.991
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.193 G=0.807
HGDP-CEPH-db Supplement 1 Middle_Est Sub 348 A=0.144 G=0.856
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.237 G=0.762
HGDP-CEPH-db Supplement 1 Africa Sub 240 A=0.083 G=0.917
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.125 G=0.875
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.00 G=1.00
Korean Genome Project KOREAN Study-wide 1832 A=0.0000 G=1.0000
HapMap Global Study-wide 1640 A=0.1537 G=0.8463
HapMap African Sub 692 A=0.097 G=0.903
HapMap American Sub 600 A=0.220 G=0.780
HapMap Europe Sub 176 A=0.295 G=0.705
HapMap Asian Sub 172 A=0.006 G=0.994
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.426 G=0.574
Northern Sweden ACPOP Study-wide 600 A=0.438 G=0.562
SGDP_PRJ Global Study-wide 542 A=0.096 G=0.904
Qatari Global Study-wide 216 A=0.125 G=0.875
A Vietnamese Genetic Variation Database Global Study-wide 212 A=0.000 G=1.000
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 90 A=0.11 G=0.89
Siberian Global Study-wide 54 A=0.15 G=0.85
The Danish reference pan genome Danish Study-wide 40 A=0.38 G=0.62
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 15 NC_000015.10:g.27808411A>C
GRCh38.p14 chr 15 NC_000015.10:g.27808411A>G
GRCh38.p14 chr 15 NC_000015.10:g.27808411A>T
GRCh37.p13 chr 15 NC_000015.9:g.28053557A>C
GRCh37.p13 chr 15 NC_000015.9:g.28053557A>G
GRCh37.p13 chr 15 NC_000015.9:g.28053557A>T
OCA2 RefSeqGene NG_009846.1:g.295902T>G
OCA2 RefSeqGene NG_009846.1:g.295902T>C
OCA2 RefSeqGene NG_009846.1:g.295902T>A
Gene: OCA2, OCA2 melanosomal transmembrane protein (minus strand)
Molecule type Change Amino acid[Codon] SO Term
OCA2 transcript variant 1 NM_000275.3:c.2432+36548T…

NM_000275.3:c.2432+36548T>G

N/A Intron Variant
OCA2 transcript variant 2 NM_001300984.2:c.2360+365…

NM_001300984.2:c.2360+36548T>G

N/A Intron Variant
OCA2 transcript variant X2 XM_011521640.3:c.2474+365…

XM_011521640.3:c.2474+36548T>G

N/A Intron Variant
OCA2 transcript variant X1 XM_017022255.2:c.2498+365…

XM_017022255.2:c.2498+36548T>G

N/A Intron Variant
OCA2 transcript variant X3 XM_017022256.2:c.2456+365…

XM_017022256.2:c.2456+36548T>G

N/A Intron Variant
OCA2 transcript variant X4 XM_017022257.2:c.2426+365…

XM_017022257.2:c.2426+36548T>G

N/A Intron Variant
OCA2 transcript variant X5 XM_017022258.2:c.2456+365…

XM_017022258.2:c.2456+36548T>G

N/A Intron Variant
OCA2 transcript variant X8 XM_017022259.2:c.2384+365…

XM_017022259.2:c.2384+36548T>G

N/A Intron Variant
OCA2 transcript variant X9 XM_017022260.2:c.2360+365…

XM_017022260.2:c.2360+36548T>G

N/A Intron Variant
OCA2 transcript variant X14 XM_017022261.2:c.2303+365…

XM_017022261.2:c.2303+36548T>G

N/A Intron Variant
OCA2 transcript variant X15 XM_017022262.2:c.2269-529…

XM_017022262.2:c.2269-52939T>G

N/A Intron Variant
OCA2 transcript variant X17 XM_017022263.2:c.2291+365…

XM_017022263.2:c.2291+36548T>G

N/A Intron Variant
OCA2 transcript variant X20 XM_017022264.2:c.2291+365…

XM_017022264.2:c.2291+36548T>G

N/A Intron Variant
OCA2 transcript variant X6 XM_047432605.1:c.2402+365…

XM_047432605.1:c.2402+36548T>G

N/A Intron Variant
OCA2 transcript variant X7 XM_047432606.1:c.2432+365…

XM_047432606.1:c.2432+36548T>G

N/A Intron Variant
OCA2 transcript variant X10 XM_047432607.1:c.2384+365…

XM_047432607.1:c.2384+36548T>G

N/A Intron Variant
OCA2 transcript variant X11 XM_047432608.1:c.2336+365…

XM_047432608.1:c.2336+36548T>G

N/A Intron Variant
OCA2 transcript variant X12 XM_047432609.1:c.2360+365…

XM_047432609.1:c.2360+36548T>G

N/A Intron Variant
OCA2 transcript variant X13 XM_047432610.1:c.2318+365…

XM_047432610.1:c.2318+36548T>G

N/A Intron Variant
OCA2 transcript variant X16 XM_047432611.1:c.2294+365…

XM_047432611.1:c.2294+36548T>G

N/A Intron Variant
OCA2 transcript variant X18 XM_047432612.1:c.2245-529…

XM_047432612.1:c.2245-52939T>G

N/A Intron Variant
OCA2 transcript variant X19 XM_047432613.1:c.2267+365…

XM_047432613.1:c.2267+36548T>G

N/A Intron Variant
OCA2 transcript variant X21 XM_047432614.1:c.2267+365…

XM_047432614.1:c.2267+36548T>G

N/A Intron Variant
OCA2 transcript variant X22 XM_047432615.1:c.2197-529…

XM_047432615.1:c.2197-52939T>G

N/A Intron Variant
OCA2 transcript variant X23 XM_047432616.1:c.2219+365…

XM_047432616.1:c.2219+36548T>G

N/A Intron Variant
OCA2 transcript variant X24 XM_047432617.1:c.2195+365…

XM_047432617.1:c.2195+36548T>G

N/A Intron Variant
OCA2 transcript variant X25 XM_047432618.1:c.2195+365…

XM_047432618.1:c.2195+36548T>G

N/A Intron Variant
OCA2 transcript variant X26 XM_047432619.1:c.2129+365…

XM_047432619.1:c.2129+36548T>G

N/A Intron Variant
OCA2 transcript variant X27 XM_017022265.2:c. N/A Genic Downstream Transcript Variant
OCA2 transcript variant X28 XR_001751294.2:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G T
GRCh38.p14 chr 15 NC_000015.10:g.27808411= NC_000015.10:g.27808411A>C NC_000015.10:g.27808411A>G NC_000015.10:g.27808411A>T
GRCh37.p13 chr 15 NC_000015.9:g.28053557= NC_000015.9:g.28053557A>C NC_000015.9:g.28053557A>G NC_000015.9:g.28053557A>T
OCA2 RefSeqGene NG_009846.1:g.295902= NG_009846.1:g.295902T>G NG_009846.1:g.295902T>C NG_009846.1:g.295902T>A
OCA2 transcript variant 1 NM_000275.2:c.2432+36548= NM_000275.2:c.2432+36548T>G NM_000275.2:c.2432+36548T>C NM_000275.2:c.2432+36548T>A
OCA2 transcript variant 1 NM_000275.3:c.2432+36548= NM_000275.3:c.2432+36548T>G NM_000275.3:c.2432+36548T>C NM_000275.3:c.2432+36548T>A
OCA2 transcript variant 2 NM_001300984.2:c.2360+36548= NM_001300984.2:c.2360+36548T>G NM_001300984.2:c.2360+36548T>C NM_001300984.2:c.2360+36548T>A
OCA2 transcript variant X1 XM_005268259.1:c.2360+36548= XM_005268259.1:c.2360+36548T>G XM_005268259.1:c.2360+36548T>C XM_005268259.1:c.2360+36548T>A
OCA2 transcript variant X2 XM_011521640.3:c.2474+36548= XM_011521640.3:c.2474+36548T>G XM_011521640.3:c.2474+36548T>C XM_011521640.3:c.2474+36548T>A
OCA2 transcript variant X1 XM_017022255.2:c.2498+36548= XM_017022255.2:c.2498+36548T>G XM_017022255.2:c.2498+36548T>C XM_017022255.2:c.2498+36548T>A
OCA2 transcript variant X3 XM_017022256.2:c.2456+36548= XM_017022256.2:c.2456+36548T>G XM_017022256.2:c.2456+36548T>C XM_017022256.2:c.2456+36548T>A
OCA2 transcript variant X4 XM_017022257.2:c.2426+36548= XM_017022257.2:c.2426+36548T>G XM_017022257.2:c.2426+36548T>C XM_017022257.2:c.2426+36548T>A
OCA2 transcript variant X5 XM_017022258.2:c.2456+36548= XM_017022258.2:c.2456+36548T>G XM_017022258.2:c.2456+36548T>C XM_017022258.2:c.2456+36548T>A
OCA2 transcript variant X8 XM_017022259.2:c.2384+36548= XM_017022259.2:c.2384+36548T>G XM_017022259.2:c.2384+36548T>C XM_017022259.2:c.2384+36548T>A
OCA2 transcript variant X9 XM_017022260.2:c.2360+36548= XM_017022260.2:c.2360+36548T>G XM_017022260.2:c.2360+36548T>C XM_017022260.2:c.2360+36548T>A
OCA2 transcript variant X14 XM_017022261.2:c.2303+36548= XM_017022261.2:c.2303+36548T>G XM_017022261.2:c.2303+36548T>C XM_017022261.2:c.2303+36548T>A
OCA2 transcript variant X15 XM_017022262.2:c.2269-52939= XM_017022262.2:c.2269-52939T>G XM_017022262.2:c.2269-52939T>C XM_017022262.2:c.2269-52939T>A
OCA2 transcript variant X17 XM_017022263.2:c.2291+36548= XM_017022263.2:c.2291+36548T>G XM_017022263.2:c.2291+36548T>C XM_017022263.2:c.2291+36548T>A
OCA2 transcript variant X20 XM_017022264.2:c.2291+36548= XM_017022264.2:c.2291+36548T>G XM_017022264.2:c.2291+36548T>C XM_017022264.2:c.2291+36548T>A
OCA2 transcript variant X6 XM_047432605.1:c.2402+36548= XM_047432605.1:c.2402+36548T>G XM_047432605.1:c.2402+36548T>C XM_047432605.1:c.2402+36548T>A
OCA2 transcript variant X7 XM_047432606.1:c.2432+36548= XM_047432606.1:c.2432+36548T>G XM_047432606.1:c.2432+36548T>C XM_047432606.1:c.2432+36548T>A
OCA2 transcript variant X10 XM_047432607.1:c.2384+36548= XM_047432607.1:c.2384+36548T>G XM_047432607.1:c.2384+36548T>C XM_047432607.1:c.2384+36548T>A
OCA2 transcript variant X11 XM_047432608.1:c.2336+36548= XM_047432608.1:c.2336+36548T>G XM_047432608.1:c.2336+36548T>C XM_047432608.1:c.2336+36548T>A
OCA2 transcript variant X12 XM_047432609.1:c.2360+36548= XM_047432609.1:c.2360+36548T>G XM_047432609.1:c.2360+36548T>C XM_047432609.1:c.2360+36548T>A
OCA2 transcript variant X13 XM_047432610.1:c.2318+36548= XM_047432610.1:c.2318+36548T>G XM_047432610.1:c.2318+36548T>C XM_047432610.1:c.2318+36548T>A
OCA2 transcript variant X16 XM_047432611.1:c.2294+36548= XM_047432611.1:c.2294+36548T>G XM_047432611.1:c.2294+36548T>C XM_047432611.1:c.2294+36548T>A
OCA2 transcript variant X18 XM_047432612.1:c.2245-52939= XM_047432612.1:c.2245-52939T>G XM_047432612.1:c.2245-52939T>C XM_047432612.1:c.2245-52939T>A
OCA2 transcript variant X19 XM_047432613.1:c.2267+36548= XM_047432613.1:c.2267+36548T>G XM_047432613.1:c.2267+36548T>C XM_047432613.1:c.2267+36548T>A
OCA2 transcript variant X21 XM_047432614.1:c.2267+36548= XM_047432614.1:c.2267+36548T>G XM_047432614.1:c.2267+36548T>C XM_047432614.1:c.2267+36548T>A
OCA2 transcript variant X22 XM_047432615.1:c.2197-52939= XM_047432615.1:c.2197-52939T>G XM_047432615.1:c.2197-52939T>C XM_047432615.1:c.2197-52939T>A
OCA2 transcript variant X23 XM_047432616.1:c.2219+36548= XM_047432616.1:c.2219+36548T>G XM_047432616.1:c.2219+36548T>C XM_047432616.1:c.2219+36548T>A
OCA2 transcript variant X24 XM_047432617.1:c.2195+36548= XM_047432617.1:c.2195+36548T>G XM_047432617.1:c.2195+36548T>C XM_047432617.1:c.2195+36548T>A
OCA2 transcript variant X25 XM_047432618.1:c.2195+36548= XM_047432618.1:c.2195+36548T>G XM_047432618.1:c.2195+36548T>C XM_047432618.1:c.2195+36548T>A
OCA2 transcript variant X26 XM_047432619.1:c.2129+36548= XM_047432619.1:c.2129+36548T>G XM_047432619.1:c.2129+36548T>C XM_047432619.1:c.2129+36548T>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

119 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss12333156 Jul 11, 2003 (116)
2 WI_SSAHASNP ss14390955 Dec 05, 2003 (119)
3 ILLUMINA ss67863386 Dec 02, 2006 (127)
4 ILLUMINA ss68011450 Dec 02, 2006 (127)
5 ILLUMINA ss68293845 Dec 12, 2006 (127)
6 ILLUMINA ss70966281 May 24, 2008 (130)
7 ILLUMINA ss71576046 May 18, 2007 (127)
8 ILLUMINA ss75735328 Dec 07, 2007 (129)
9 HGSV ss81852381 Dec 15, 2007 (130)
10 KRIBB_YJKIM ss84774071 Dec 15, 2007 (130)
11 BCMHGSC_JDW ss90103317 Mar 24, 2008 (129)
12 HUMANGENOME_JCVI ss96799705 Feb 04, 2009 (130)
13 BGI ss106418735 Feb 04, 2009 (130)
14 1000GENOMES ss108694168 Jan 23, 2009 (130)
15 1000GENOMES ss113951225 Jan 25, 2009 (130)
16 ILLUMINA-UK ss118171126 Feb 14, 2009 (130)
17 ENSEMBL ss134209463 Dec 01, 2009 (131)
18 ENSEMBL ss143613076 Dec 01, 2009 (131)
19 ILLUMINA ss154464671 Dec 01, 2009 (131)
20 GMI ss156356981 Dec 01, 2009 (131)
21 ILLUMINA ss159639233 Dec 01, 2009 (131)
22 ILLUMINA ss160942500 Dec 01, 2009 (131)
23 COMPLETE_GENOMICS ss168980490 Jul 04, 2010 (132)
24 COMPLETE_GENOMICS ss170881577 Jul 04, 2010 (132)
25 ILLUMINA ss174683580 Jul 04, 2010 (132)
26 BUSHMAN ss200651021 Jul 04, 2010 (132)
27 BCM-HGSC-SUB ss207310268 Jul 04, 2010 (132)
28 1000GENOMES ss226811922 Jul 14, 2010 (132)
29 1000GENOMES ss236721866 Jul 15, 2010 (132)
30 1000GENOMES ss243120037 Jul 15, 2010 (132)
31 BL ss254860105 May 09, 2011 (134)
32 GMI ss282192110 May 04, 2012 (137)
33 GMI ss286924295 Apr 25, 2013 (138)
34 PJP ss291807897 May 09, 2011 (134)
35 ILLUMINA ss481792825 May 04, 2012 (137)
36 ILLUMINA ss482756068 Sep 08, 2015 (146)
37 ILLUMINA ss537547119 Sep 08, 2015 (146)
38 TISHKOFF ss564382171 Apr 25, 2013 (138)
39 SSMP ss660094360 Apr 25, 2013 (138)
40 ILLUMINA ss778713794 Sep 08, 2015 (146)
41 ILLUMINA ss784236062 Sep 08, 2015 (146)
42 ILLUMINA ss832544295 Sep 08, 2015 (146)
43 ILLUMINA ss833150090 Jul 13, 2019 (153)
44 ILLUMINA ss834173002 Sep 08, 2015 (146)
45 EVA-GONL ss991622523 Aug 21, 2014 (142)
46 JMKIDD_LAB ss1080001611 Aug 21, 2014 (142)
47 1000GENOMES ss1352813859 Aug 21, 2014 (142)
48 DDI ss1427575267 Apr 01, 2015 (144)
49 EVA_GENOME_DK ss1577521832 Apr 01, 2015 (144)
50 EVA_UK10K_ALSPAC ss1632667321 Apr 01, 2015 (144)
51 EVA_UK10K_TWINSUK ss1675661354 Apr 01, 2015 (144)
52 EVA_DECODE ss1695634009 Apr 01, 2015 (144)
53 EVA_SVP ss1713477486 Apr 01, 2015 (144)
54 ILLUMINA ss1752154342 Sep 08, 2015 (146)
55 HAMMER_LAB ss1808130147 Sep 08, 2015 (146)
56 WEILL_CORNELL_DGM ss1935019667 Feb 12, 2016 (147)
57 GENOMED ss1968070207 Jul 19, 2016 (147)
58 JJLAB ss2028290019 Sep 14, 2016 (149)
59 USC_VALOUEV ss2156686988 Dec 20, 2016 (150)
60 HUMAN_LONGEVITY ss2205513484 Dec 20, 2016 (150)
61 SYSTEMSBIOZJU ss2628638019 Nov 08, 2017 (151)
62 ILLUMINA ss2633208445 Nov 08, 2017 (151)
63 GRF ss2701145948 Nov 08, 2017 (151)
64 GNOMAD ss2932966912 Nov 08, 2017 (151)
65 SWEGEN ss3013003397 Nov 08, 2017 (151)
66 BIOINF_KMB_FNS_UNIBA ss3027969181 Nov 08, 2017 (151)
67 CSHL ss3351041075 Nov 08, 2017 (151)
68 ILLUMINA ss3627322913 Oct 12, 2018 (152)
69 ILLUMINA ss3631202771 Oct 12, 2018 (152)
70 ILLUMINA ss3633091573 Oct 12, 2018 (152)
71 ILLUMINA ss3633795922 Oct 12, 2018 (152)
72 ILLUMINA ss3634597854 Oct 12, 2018 (152)
73 ILLUMINA ss3635484997 Oct 12, 2018 (152)
74 ILLUMINA ss3636288105 Oct 12, 2018 (152)
75 ILLUMINA ss3637236226 Oct 12, 2018 (152)
76 ILLUMINA ss3638075793 Oct 12, 2018 (152)
77 ILLUMINA ss3639051314 Oct 12, 2018 (152)
78 ILLUMINA ss3639834977 Oct 12, 2018 (152)
79 ILLUMINA ss3640305181 Oct 12, 2018 (152)
80 ILLUMINA ss3641353086 Oct 12, 2018 (152)
81 ILLUMINA ss3643060510 Oct 12, 2018 (152)
82 ILLUMINA ss3643885223 Oct 12, 2018 (152)
83 URBANLAB ss3650316773 Oct 12, 2018 (152)
84 EGCUT_WGS ss3680174750 Jul 13, 2019 (153)
85 EVA_DECODE ss3697581062 Jul 13, 2019 (153)
86 ACPOP ss3740785728 Jul 13, 2019 (153)
87 ILLUMINA ss3744898420 Jul 13, 2019 (153)
88 EVA ss3752889122 Jul 13, 2019 (153)
89 ILLUMINA ss3772397137 Jul 13, 2019 (153)
90 PACBIO ss3787800492 Jul 13, 2019 (153)
91 PACBIO ss3792819806 Jul 13, 2019 (153)
92 PACBIO ss3797704266 Jul 13, 2019 (153)
93 KHV_HUMAN_GENOMES ss3818206382 Jul 13, 2019 (153)
94 EVA ss3834155612 Apr 27, 2020 (154)
95 EVA ss3840674583 Apr 27, 2020 (154)
96 EVA ss3846163344 Apr 27, 2020 (154)
97 HGDP ss3847518139 Apr 27, 2020 (154)
98 SGDP_PRJ ss3882548013 Apr 27, 2020 (154)
99 KRGDB ss3931672129 Apr 27, 2020 (154)
100 KOGIC ss3975851876 Apr 27, 2020 (154)
101 EVA ss3985706626 Apr 26, 2021 (155)
102 EVA ss4017693020 Apr 26, 2021 (155)
103 TOPMED ss4985659042 Apr 26, 2021 (155)
104 TOMMO_GENOMICS ss5215397163 Apr 26, 2021 (155)
105 1000G_HIGH_COVERAGE ss5297853982 Oct 17, 2022 (156)
106 EVA ss5315771705 Oct 17, 2022 (156)
107 EVA ss5418183294 Oct 17, 2022 (156)
108 HUGCELL_USP ss5491670672 Oct 17, 2022 (156)
109 EVA ss5511381998 Oct 17, 2022 (156)
110 1000G_HIGH_COVERAGE ss5598962164 Oct 17, 2022 (156)
111 SANFORD_IMAGENETICS ss5657171491 Oct 17, 2022 (156)
112 TOMMO_GENOMICS ss5768969997 Oct 17, 2022 (156)
113 EVA ss5799932987 Oct 17, 2022 (156)
114 YY_MCH ss5815186886 Oct 17, 2022 (156)
115 EVA ss5827980773 Oct 17, 2022 (156)
116 EVA ss5851226772 Oct 17, 2022 (156)
117 EVA ss5875242672 Oct 17, 2022 (156)
118 EVA ss5948582099 Oct 17, 2022 (156)
119 EVA ss5980859040 Oct 17, 2022 (156)
120 1000Genomes NC_000015.9 - 28053557 Oct 12, 2018 (152)
121 1000Genomes_30x NC_000015.10 - 27808411 Oct 17, 2022 (156)
122 The Avon Longitudinal Study of Parents and Children NC_000015.9 - 28053557 Oct 12, 2018 (152)
123 Genetic variation in the Estonian population NC_000015.9 - 28053557 Oct 12, 2018 (152)
124 The Danish reference pan genome NC_000015.9 - 28053557 Apr 27, 2020 (154)
125 gnomAD - Genomes NC_000015.10 - 27808411 Apr 26, 2021 (155)
126 Genome of the Netherlands Release 5 NC_000015.9 - 28053557 Apr 27, 2020 (154)
127 HGDP-CEPH-db Supplement 1 NC_000015.8 - 25727152 Apr 27, 2020 (154)
128 HapMap NC_000015.10 - 27808411 Apr 27, 2020 (154)
129 KOREAN population from KRGDB NC_000015.9 - 28053557 Apr 27, 2020 (154)
130 Korean Genome Project NC_000015.10 - 27808411 Apr 27, 2020 (154)
131 Northern Sweden NC_000015.9 - 28053557 Jul 13, 2019 (153)
132 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000015.9 - 28053557 Apr 26, 2021 (155)
133 Qatari NC_000015.9 - 28053557 Apr 27, 2020 (154)
134 SGDP_PRJ NC_000015.9 - 28053557 Apr 27, 2020 (154)
135 Siberian NC_000015.9 - 28053557 Apr 27, 2020 (154)
136 8.3KJPN NC_000015.9 - 28053557 Apr 26, 2021 (155)
137 14KJPN NC_000015.10 - 27808411 Oct 17, 2022 (156)
138 TopMed NC_000015.10 - 27808411 Apr 26, 2021 (155)
139 UK 10K study - Twins NC_000015.9 - 28053557 Oct 12, 2018 (152)
140 A Vietnamese Genetic Variation Database NC_000015.9 - 28053557 Jul 13, 2019 (153)
141 ALFA NC_000015.10 - 27808411 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58223475 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
38849523, ss3931672129 NC_000015.9:28053556:A:C NC_000015.10:27808410:A:C (self)
196031, ss81852381, ss90103317, ss108694168, ss113951225, ss118171126, ss168980490, ss170881577, ss200651021, ss207310268, ss254860105, ss282192110, ss286924295, ss291807897, ss1695634009, ss1713477486, ss3639051314, ss3639834977, ss3643060510, ss3643885223, ss3847518139 NC_000015.8:25727151:A:G NC_000015.10:27808410:A:G (self)
65860758, 36571008, 25912998, 3791838, 16336479, 38849523, 14070593, 932553, 17061597, 34564993, 9203342, 73366470, 36571008, 8137000, ss226811922, ss236721866, ss243120037, ss481792825, ss482756068, ss537547119, ss564382171, ss660094360, ss778713794, ss784236062, ss832544295, ss833150090, ss834173002, ss991622523, ss1080001611, ss1352813859, ss1427575267, ss1577521832, ss1632667321, ss1675661354, ss1752154342, ss1808130147, ss1935019667, ss1968070207, ss2028290019, ss2156686988, ss2628638019, ss2633208445, ss2701145948, ss2932966912, ss3013003397, ss3351041075, ss3627322913, ss3631202771, ss3633091573, ss3633795922, ss3634597854, ss3635484997, ss3636288105, ss3637236226, ss3638075793, ss3640305181, ss3641353086, ss3680174750, ss3740785728, ss3744898420, ss3752889122, ss3772397137, ss3787800492, ss3792819806, ss3797704266, ss3834155612, ss3840674583, ss3882548013, ss3931672129, ss3985706626, ss4017693020, ss5215397163, ss5315771705, ss5418183294, ss5511381998, ss5657171491, ss5799932987, ss5827980773, ss5948582099, ss5980859040 NC_000015.9:28053556:A:G NC_000015.10:27808410:A:G (self)
86488099, 464225985, 1232151, 32229877, 102807101, 201204702, 15259865653, ss2205513484, ss3027969181, ss3650316773, ss3697581062, ss3818206382, ss3846163344, ss3975851876, ss4985659042, ss5297853982, ss5491670672, ss5598962164, ss5768969997, ss5815186886, ss5851226772, ss5875242672 NC_000015.10:27808410:A:G NC_000015.10:27808410:A:G (self)
ss12333156 NT_010280.15:419047:A:G NC_000015.10:27808410:A:G (self)
ss14390955 NT_010280.16:419047:A:G NC_000015.10:27808410:A:G (self)
ss67863386, ss68011450, ss68293845, ss70966281, ss71576046, ss75735328, ss84774071, ss96799705, ss106418735, ss134209463, ss143613076, ss154464671, ss156356981, ss159639233, ss160942500, ss174683580 NT_026446.14:4488703:A:G NC_000015.10:27808410:A:G (self)
38849523, ss3931672129 NC_000015.9:28053556:A:T NC_000015.10:27808410:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs8036718

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07