Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs778732687

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr8:18222636 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
C>G / C>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.000014 (2/140224, GnomAD)
G=0.00000 (0/14418, ALFA)
T=0.00000 (0/14418, ALFA) (+ 4 more)
G=0.0003 (1/3854, ALSPAC)
G=0.0000 (0/3708, TWINSUK)
T=0.0003 (1/2922, KOREAN)
G=0.003 (1/304, FINRISK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
NAT1 : Stop Gained
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 14418 C=1.00000 G=0.00000, T=0.00000
European Sub 9822 C=1.0000 G=0.0000, T=0.0000
African Sub 2946 C=1.0000 G=0.0000, T=0.0000
African Others Sub 114 C=1.000 G=0.000, T=0.000
African American Sub 2832 C=1.0000 G=0.0000, T=0.0000
Asian Sub 112 C=1.000 G=0.000, T=0.000
East Asian Sub 86 C=1.00 G=0.00, T=0.00
Other Asian Sub 26 C=1.00 G=0.00, T=0.00
Latin American 1 Sub 146 C=1.000 G=0.000, T=0.000
Latin American 2 Sub 610 C=1.000 G=0.000, T=0.000
South Asian Sub 98 C=1.00 G=0.00, T=0.00
Other Sub 684 C=1.000 G=0.000, T=0.000


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD - Genomes Global Study-wide 140224 C=0.999986 G=0.000014
gnomAD - Genomes European Sub 75932 C=0.99999 G=0.00001
gnomAD - Genomes African Sub 42026 C=1.00000 G=0.00000
gnomAD - Genomes American Sub 13658 C=0.99993 G=0.00007
gnomAD - Genomes Ashkenazi Jewish Sub 3322 C=1.0000 G=0.0000
gnomAD - Genomes East Asian Sub 3132 C=1.0000 G=0.0000
gnomAD - Genomes Other Sub 2154 C=1.0000 G=0.0000
Allele Frequency Aggregator Total Global 14418 C=1.00000 G=0.00000, T=0.00000
Allele Frequency Aggregator European Sub 9822 C=1.0000 G=0.0000, T=0.0000
Allele Frequency Aggregator African Sub 2946 C=1.0000 G=0.0000, T=0.0000
Allele Frequency Aggregator Other Sub 684 C=1.000 G=0.000, T=0.000
Allele Frequency Aggregator Latin American 2 Sub 610 C=1.000 G=0.000, T=0.000
Allele Frequency Aggregator Latin American 1 Sub 146 C=1.000 G=0.000, T=0.000
Allele Frequency Aggregator Asian Sub 112 C=1.000 G=0.000, T=0.000
Allele Frequency Aggregator South Asian Sub 98 C=1.00 G=0.00, T=0.00
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 C=0.9997 G=0.0003
UK 10K study - Twins TWIN COHORT Study-wide 3708 C=1.0000 G=0.0000
KOREAN population from KRGDB KOREAN Study-wide 2922 C=0.9997 T=0.0003
FINRISK Finnish from FINRISK project Study-wide 304 C=0.997 G=0.003
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 8 NC_000008.11:g.18222636C>G
GRCh38.p14 chr 8 NC_000008.11:g.18222636C>T
GRCh37.p13 chr 8 NC_000008.10:g.18080145C>G
GRCh37.p13 chr 8 NC_000008.10:g.18080145C>T
NAT1 RefSeqGene NG_012245.2:g.57175C>G
NAT1 RefSeqGene NG_012245.2:g.57175C>T
Gene: NAT1, N-acetyltransferase 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
NAT1 transcript variant 5 NM_000662.8:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_000653.3:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 5 NM_000662.8:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_000653.3:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 1 NM_001160170.4:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153642.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 1 NM_001160170.4:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153642.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 8 NM_001160176.4:c.775C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001153648.1:p.Arg259Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 8 NM_001160176.4:c.775C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001153648.1:p.Arg259Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 10 NM_001291962.2:c.775C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001278891.1:p.Arg259Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 10 NM_001291962.2:c.775C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001278891.1:p.Arg259Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 9 NM_001160179.3:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153651.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 9 NM_001160179.3:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153651.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 2 NM_001160171.4:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153643.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 2 NM_001160171.4:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153643.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 7 NM_001160175.4:c.775C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001153647.1:p.Arg259Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 7 NM_001160175.4:c.775C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform b NP_001153647.1:p.Arg259Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 3 NM_001160172.4:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153644.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 3 NM_001160172.4:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153644.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 4 NM_001160173.4:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153645.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 4 NM_001160173.4:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153645.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant 6 NM_001160174.3:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153646.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant 6 NM_001160174.3:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform a NP_001153646.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant X1 XM_047422397.1:c.775C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X1 XP_047278353.1:p.Arg259Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant X1 XM_047422397.1:c.775C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X1 XP_047278353.1:p.Arg259Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant X2 XM_047422398.1:c.775C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X1 XP_047278354.1:p.Arg259Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant X2 XM_047422398.1:c.775C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X1 XP_047278354.1:p.Arg259Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant X3 XM_047422399.1:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_047278355.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant X3 XM_047422399.1:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_047278355.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant X4 XM_006716410.4:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_006716473.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant X4 XM_006716410.4:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_006716473.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
NAT1 transcript variant X5 XM_011544689.3:c.589C>G R [CGA] > G [GGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_011542991.1:p.Arg197Gly R (Arg) > G (Gly) Missense Variant
NAT1 transcript variant X5 XM_011544689.3:c.589C>T R [CGA] > * [TGA] Coding Sequence Variant
arylamine N-acetyltransferase 1 isoform X2 XP_011542991.1:p.Arg197Ter R (Arg) > * (Ter) Stop Gained
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement C= G T
GRCh38.p14 chr 8 NC_000008.11:g.18222636= NC_000008.11:g.18222636C>G NC_000008.11:g.18222636C>T
GRCh37.p13 chr 8 NC_000008.10:g.18080145= NC_000008.10:g.18080145C>G NC_000008.10:g.18080145C>T
NAT1 RefSeqGene NG_012245.2:g.57175= NG_012245.2:g.57175C>G NG_012245.2:g.57175C>T
NAT1 transcript variant 5 NM_000662.8:c.589= NM_000662.8:c.589C>G NM_000662.8:c.589C>T
NAT1 transcript variant 5 NM_000662.7:c.589= NM_000662.7:c.589C>G NM_000662.7:c.589C>T
NAT1 transcript variant 5 NM_000662.6:c.589= NM_000662.6:c.589C>G NM_000662.6:c.589C>T
NAT1 transcript variant 5 NM_000662.5:c.589= NM_000662.5:c.589C>G NM_000662.5:c.589C>T
NAT1 transcript variant 1 NM_001160170.4:c.589= NM_001160170.4:c.589C>G NM_001160170.4:c.589C>T
NAT1 transcript variant 1 NM_001160170.3:c.589= NM_001160170.3:c.589C>G NM_001160170.3:c.589C>T
NAT1 transcript variant 1 NM_001160170.2:c.589= NM_001160170.2:c.589C>G NM_001160170.2:c.589C>T
NAT1 transcript variant 1 NM_001160170.1:c.589= NM_001160170.1:c.589C>G NM_001160170.1:c.589C>T
NAT1 transcript variant 2 NM_001160171.4:c.589= NM_001160171.4:c.589C>G NM_001160171.4:c.589C>T
NAT1 transcript variant 2 NM_001160171.3:c.589= NM_001160171.3:c.589C>G NM_001160171.3:c.589C>T
NAT1 transcript variant 2 NM_001160171.2:c.589= NM_001160171.2:c.589C>G NM_001160171.2:c.589C>T
NAT1 transcript variant 2 NM_001160171.1:c.589= NM_001160171.1:c.589C>G NM_001160171.1:c.589C>T
NAT1 transcript variant 3 NM_001160172.4:c.589= NM_001160172.4:c.589C>G NM_001160172.4:c.589C>T
NAT1 transcript variant 3 NM_001160172.3:c.589= NM_001160172.3:c.589C>G NM_001160172.3:c.589C>T
NAT1 transcript variant 3 NM_001160172.2:c.589= NM_001160172.2:c.589C>G NM_001160172.2:c.589C>T
NAT1 transcript variant 3 NM_001160172.1:c.589= NM_001160172.1:c.589C>G NM_001160172.1:c.589C>T
NAT1 transcript variant 7 NM_001160175.4:c.775= NM_001160175.4:c.775C>G NM_001160175.4:c.775C>T
NAT1 transcript variant 7 NM_001160175.3:c.775= NM_001160175.3:c.775C>G NM_001160175.3:c.775C>T
NAT1 transcript variant 7 NM_001160175.2:c.775= NM_001160175.2:c.775C>G NM_001160175.2:c.775C>T
NAT1 transcript variant 7 NM_001160175.1:c.775= NM_001160175.1:c.775C>G NM_001160175.1:c.775C>T
NAT1 transcript variant 4 NM_001160173.4:c.589= NM_001160173.4:c.589C>G NM_001160173.4:c.589C>T
NAT1 transcript variant 4 NM_001160173.3:c.589= NM_001160173.3:c.589C>G NM_001160173.3:c.589C>T
NAT1 transcript variant 4 NM_001160173.2:c.589= NM_001160173.2:c.589C>G NM_001160173.2:c.589C>T
NAT1 transcript variant 4 NM_001160173.1:c.589= NM_001160173.1:c.589C>G NM_001160173.1:c.589C>T
NAT1 transcript variant 8 NM_001160176.4:c.775= NM_001160176.4:c.775C>G NM_001160176.4:c.775C>T
NAT1 transcript variant 8 NM_001160176.3:c.775= NM_001160176.3:c.775C>G NM_001160176.3:c.775C>T
NAT1 transcript variant 8 NM_001160176.2:c.775= NM_001160176.2:c.775C>G NM_001160176.2:c.775C>T
NAT1 transcript variant 8 NM_001160176.1:c.775= NM_001160176.1:c.775C>G NM_001160176.1:c.775C>T
NAT1 transcript variant 6 NM_001160174.3:c.589= NM_001160174.3:c.589C>G NM_001160174.3:c.589C>T
NAT1 transcript variant 6 NM_001160174.2:c.589= NM_001160174.2:c.589C>G NM_001160174.2:c.589C>T
NAT1 transcript variant 6 NM_001160174.1:c.589= NM_001160174.1:c.589C>G NM_001160174.1:c.589C>T
NAT1 transcript variant 9 NM_001160179.3:c.589= NM_001160179.3:c.589C>G NM_001160179.3:c.589C>T
NAT1 transcript variant 9 NM_001160179.2:c.589= NM_001160179.2:c.589C>G NM_001160179.2:c.589C>T
NAT1 transcript variant 9 NM_001160179.1:c.589= NM_001160179.1:c.589C>G NM_001160179.1:c.589C>T
NAT1 transcript variant 10 NM_001291962.2:c.775= NM_001291962.2:c.775C>G NM_001291962.2:c.775C>T
NAT1 transcript variant 10 NM_001291962.1:c.775= NM_001291962.1:c.775C>G NM_001291962.1:c.775C>T
NAT1 transcript variant X4 XM_006716410.4:c.589= XM_006716410.4:c.589C>G XM_006716410.4:c.589C>T
NAT1 transcript variant X4 XM_006716410.3:c.589= XM_006716410.3:c.589C>G XM_006716410.3:c.589C>T
NAT1 transcript variant X3 XM_006716410.2:c.589= XM_006716410.2:c.589C>G XM_006716410.2:c.589C>T
NAT1 transcript variant X1 XM_006716410.1:c.589= XM_006716410.1:c.589C>G XM_006716410.1:c.589C>T
NAT1 transcript variant X5 XM_011544689.3:c.589= XM_011544689.3:c.589C>G XM_011544689.3:c.589C>T
NAT1 transcript variant X5 XM_011544689.2:c.589= XM_011544689.2:c.589C>G XM_011544689.2:c.589C>T
NAT1 transcript variant X4 XM_011544689.1:c.589= XM_011544689.1:c.589C>G XM_011544689.1:c.589C>T
NAT1 transcript variant X1 XM_047422397.1:c.775= XM_047422397.1:c.775C>G XM_047422397.1:c.775C>T
NAT1 transcript variant X2 XM_047422398.1:c.775= XM_047422398.1:c.775C>G XM_047422398.1:c.775C>T
NAT1 transcript variant X3 XM_047422399.1:c.589= XM_047422399.1:c.589C>G XM_047422399.1:c.589C>T
arylamine N-acetyltransferase 1 isoform a NP_000653.3:p.Arg197= NP_000653.3:p.Arg197Gly NP_000653.3:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform a NP_001153642.1:p.Arg197= NP_001153642.1:p.Arg197Gly NP_001153642.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform a NP_001153643.1:p.Arg197= NP_001153643.1:p.Arg197Gly NP_001153643.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform a NP_001153644.1:p.Arg197= NP_001153644.1:p.Arg197Gly NP_001153644.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform b NP_001153647.1:p.Arg259= NP_001153647.1:p.Arg259Gly NP_001153647.1:p.Arg259Ter
arylamine N-acetyltransferase 1 isoform a NP_001153645.1:p.Arg197= NP_001153645.1:p.Arg197Gly NP_001153645.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform b NP_001153648.1:p.Arg259= NP_001153648.1:p.Arg259Gly NP_001153648.1:p.Arg259Ter
arylamine N-acetyltransferase 1 isoform a NP_001153646.1:p.Arg197= NP_001153646.1:p.Arg197Gly NP_001153646.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform a NP_001153651.1:p.Arg197= NP_001153651.1:p.Arg197Gly NP_001153651.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform b NP_001278891.1:p.Arg259= NP_001278891.1:p.Arg259Gly NP_001278891.1:p.Arg259Ter
arylamine N-acetyltransferase 1 isoform X2 XP_006716473.1:p.Arg197= XP_006716473.1:p.Arg197Gly XP_006716473.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform X2 XP_011542991.1:p.Arg197= XP_011542991.1:p.Arg197Gly XP_011542991.1:p.Arg197Ter
arylamine N-acetyltransferase 1 isoform X1 XP_047278353.1:p.Arg259= XP_047278353.1:p.Arg259Gly XP_047278353.1:p.Arg259Ter
arylamine N-acetyltransferase 1 isoform X1 XP_047278354.1:p.Arg259= XP_047278354.1:p.Arg259Gly XP_047278354.1:p.Arg259Ter
arylamine N-acetyltransferase 1 isoform X2 XP_047278355.1:p.Arg197= XP_047278355.1:p.Arg197Gly XP_047278355.1:p.Arg197Ter
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

13 SubSNP, 12 Frequency submissions
No Submitter Submission ID Date (Build)
1 EVA_FINRISK ss1584057283 Apr 01, 2015 (144)
2 EVA_UK10K_ALSPAC ss1620096461 Apr 01, 2015 (144)
3 EVA_UK10K_TWINSUK ss1663090494 Apr 01, 2015 (144)
4 EVA_EXAC ss1689107691 Apr 01, 2015 (144)
5 EVA_EXAC ss1689107692 Apr 01, 2015 (144)
6 HUMAN_LONGEVITY ss2301150676 Dec 20, 2016 (150)
7 GNOMAD ss2737016449 Nov 08, 2017 (151)
8 GNOMAD ss2748005867 Nov 08, 2017 (151)
9 GNOMAD ss2863915042 Nov 08, 2017 (151)
10 KRGDB ss3916826281 Apr 26, 2020 (154)
11 TOPMED ss4777551351 Apr 26, 2021 (155)
12 TOPMED ss4777551352 Apr 26, 2021 (155)
13 HUGCELL_USP ss5472928048 Oct 13, 2022 (156)
14 The Avon Longitudinal Study of Parents and Children NC_000008.10 - 18080145 Oct 12, 2018 (152)
15 ExAC

Submission ignored due to conflicting rows:
Row 9201037 (NC_000008.10:18080144:C:C 121158/121164, NC_000008.10:18080144:C:G 6/121164)
Row 9201038 (NC_000008.10:18080144:C:C 121163/121164, NC_000008.10:18080144:C:T 1/121164)

- Oct 12, 2018 (152)
16 ExAC

Submission ignored due to conflicting rows:
Row 9201037 (NC_000008.10:18080144:C:C 121158/121164, NC_000008.10:18080144:C:G 6/121164)
Row 9201038 (NC_000008.10:18080144:C:C 121163/121164, NC_000008.10:18080144:C:T 1/121164)

- Oct 12, 2018 (152)
17 FINRISK NC_000008.10 - 18080145 Apr 26, 2020 (154)
18 gnomAD - Genomes NC_000008.11 - 18222636 Apr 26, 2021 (155)
19 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 6184359 (NC_000008.10:18080144:C:C 249967/249972, NC_000008.10:18080144:C:G 5/249972)
Row 6184360 (NC_000008.10:18080144:C:C 249971/249972, NC_000008.10:18080144:C:T 1/249972)

- Jul 13, 2019 (153)
20 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 6184359 (NC_000008.10:18080144:C:C 249967/249972, NC_000008.10:18080144:C:G 5/249972)
Row 6184360 (NC_000008.10:18080144:C:C 249971/249972, NC_000008.10:18080144:C:T 1/249972)

- Jul 13, 2019 (153)
21 KOREAN population from KRGDB NC_000008.10 - 18080145 Apr 26, 2020 (154)
22 TopMed

Submission ignored due to conflicting rows:
Row 614928911 (NC_000008.11:18222635:C:G 3/264690)
Row 614928912 (NC_000008.11:18222635:C:T 4/264690)

- Apr 26, 2021 (155)
23 TopMed

Submission ignored due to conflicting rows:
Row 614928911 (NC_000008.11:18222635:C:G 3/264690)
Row 614928912 (NC_000008.11:18222635:C:T 4/264690)

- Apr 26, 2021 (155)
24 UK 10K study - Twins NC_000008.10 - 18080145 Oct 12, 2018 (152)
25 ALFA NC_000008.11 - 18222636 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
22757067, 53744, 22757067, ss1584057283, ss1620096461, ss1663090494, ss1689107691, ss2737016449, ss2748005867, ss2863915042 NC_000008.10:18080144:C:G NC_000008.11:18222635:C:G (self)
288739421, 12537824849, ss2301150676, ss4777551351 NC_000008.11:18222635:C:G NC_000008.11:18222635:C:G (self)
24003675, ss1689107692, ss2737016449, ss3916826281 NC_000008.10:18080144:C:T NC_000008.11:18222635:C:T (self)
12537824849, ss2301150676, ss4777551352, ss5472928048 NC_000008.11:18222635:C:T NC_000008.11:18222635:C:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs778732687

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07