Name: rs77852524
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs77852524

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:122254267 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>G / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.00020 (9/44778, ALFA)
G=0.07463 (2109/28258, 14KJPN)
G=0.07464 (1251/16760, 8.3KJPN) (+ 8 more)
G=0.00008 (1/13006, GO-ESP)
G=0.0103 (66/6404, 1000G_30x)
G=0.0112 (56/5008, 1000G)
G=0.0548 (160/2922, KOREAN)
G=0.0573 (105/1832, Korea1K)
G=0.055 (34/614, Vietnamese)
C=0.5 (5/10, SGDP_PRJ)
G=0.5 (5/10, SGDP_PRJ)

Clinical Significance: Reported in ClinVar
Gene : Consequence: CASR : Synonymous Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	44778	C=0.99980	A=0.00000, G=0.00020, T=0.00000
European	Sub	32782	C=0.99994	A=0.00000, G=0.00006, T=0.00000
African	Sub	3560	C=1.0000	A=0.0000, G=0.0000, T=0.0000
African Others	Sub	122	C=1.000	A=0.000, G=0.000, T=0.000
African American	Sub	3438	C=1.0000	A=0.0000, G=0.0000, T=0.0000
Asian	Sub	164	C=0.976	A=0.000, G=0.024, T=0.000
East Asian	Sub	108	C=0.991	A=0.000, G=0.009, T=0.000
Other Asian	Sub	56	C=0.95	A=0.00, G=0.05, T=0.00
Latin American 1	Sub	500	C=1.000	A=0.000, G=0.000, T=0.000
Latin American 2	Sub	628	C=1.000	A=0.000, G=0.000, T=0.000
South Asian	Sub	98	C=1.00	A=0.00, G=0.00, T=0.00
Other	Sub	7046	C=0.9996	A=0.0000, G=0.0004, T=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	44778	C=0.99980	A=0.00000, G=0.00020, T=0.00000
Allele Frequency Aggregator	European	Sub	32782	C=0.99994	A=0.00000, G=0.00006, T=0.00000
Allele Frequency Aggregator	Other	Sub	7046	C=0.9996	A=0.0000, G=0.0004, T=0.0000
Allele Frequency Aggregator	African	Sub	3560	C=1.0000	A=0.0000, G=0.0000, T=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	628	C=1.000	A=0.000, G=0.000, T=0.000
Allele Frequency Aggregator	Latin American 1	Sub	500	C=1.000	A=0.000, G=0.000, T=0.000
Allele Frequency Aggregator	Asian	Sub	164	C=0.976	A=0.000, G=0.024, T=0.000
Allele Frequency Aggregator	South Asian	Sub	98	C=1.00	A=0.00, G=0.00, T=0.00
14KJPN	JAPANESE	Study-wide	28258	C=0.92537	G=0.07463
8.3KJPN	JAPANESE	Study-wide	16760	C=0.92536	G=0.07464
GO Exome Sequencing Project	Global	Study-wide	13006	C=0.99992	G=0.00008
GO Exome Sequencing Project	European American	Sub	8600	C=0.9999	G=0.0001
GO Exome Sequencing Project	African American	Sub	4406	C=1.0000	G=0.0000
1000Genomes_30x	Global	Study-wide	6404	C=0.9897	G=0.0103
1000Genomes_30x	African	Sub	1786	C=1.0000	G=0.0000
1000Genomes_30x	Europe	Sub	1266	C=1.0000	G=0.0000
1000Genomes_30x	South Asian	Sub	1202	C=0.9975	G=0.0025
1000Genomes_30x	East Asian	Sub	1170	C=0.9462	G=0.0538
1000Genomes_30x	American	Sub	980	C=1.000	G=0.000
1000Genomes	Global	Study-wide	5008	C=0.9888	G=0.0112
1000Genomes	African	Sub	1322	C=1.0000	G=0.0000
1000Genomes	East Asian	Sub	1008	C=0.9464	G=0.0536
1000Genomes	Europe	Sub	1006	C=1.0000	G=0.0000
1000Genomes	South Asian	Sub	978	C=0.998	G=0.002
1000Genomes	American	Sub	694	C=1.000	G=0.000
KOREAN population from KRGDB	KOREAN	Study-wide	2922	C=0.9452	G=0.0548
Korean Genome Project	KOREAN	Study-wide	1832	C=0.9427	G=0.0573
A Vietnamese Genetic Variation Database	Global	Study-wide	614	C=0.945	G=0.055
SGDP_PRJ	Global	Study-wide	10	C=0.5	G=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.122254267C>A
GRCh38.p14 chr 3	NC_000003.12:g.122254267C>G
GRCh38.p14 chr 3	NC_000003.12:g.122254267C>T
GRCh37.p13 chr 3	NC_000003.11:g.121973114C>A
GRCh37.p13 chr 3	NC_000003.11:g.121973114C>G
GRCh37.p13 chr 3	NC_000003.11:g.121973114C>T
CASR RefSeqGene	NG_009058.2:g.75600C>A
CASR RefSeqGene	NG_009058.2:g.75600C>G
CASR RefSeqGene	NG_009058.2:g.75600C>T

Gene: CASR, calcium sensing receptor (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
CASR transcript variant 1	NM_001178065.2:c.78C>A	A [GCC] > A [GCA]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 1 precursor	NP_001171536.2:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant 1	NM_001178065.2:c.78C>G	A [GCC] > A [GCG]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 1 precursor	NP_001171536.2:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant 1	NM_001178065.2:c.78C>T	A [GCC] > A [GCT]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 1 precursor	NP_001171536.2:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant 2	NM_000388.4:c.78C>A	A [GCC] > A [GCA]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 2 precursor	NP_000379.3:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant 2	NM_000388.4:c.78C>G	A [GCC] > A [GCG]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 2 precursor	NP_000379.3:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant 2	NM_000388.4:c.78C>T	A [GCC] > A [GCT]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform 2 precursor	NP_000379.3:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X4	XM_047449065.1:c.-99=	N/A	5 Prime UTR Variant
CASR transcript variant X1	XM_006713789.4:c.78C>A	A [GCC] > A [GCA]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_006713852.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X1	XM_006713789.4:c.78C>G	A [GCC] > A [GCG]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_006713852.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X1	XM_006713789.4:c.78C>T	A [GCC] > A [GCT]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_006713852.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X2	XM_017007324.2:c.78C>A	A [GCC] > A [GCA]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862813.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X2	XM_017007324.2:c.78C>G	A [GCC] > A [GCG]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862813.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X2	XM_017007324.2:c.78C>T	A [GCC] > A [GCT]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862813.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X3	XM_017007325.2:c.78C>A	A [GCC] > A [GCA]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862814.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X3	XM_017007325.2:c.78C>G	A [GCC] > A [GCG]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862814.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant
CASR transcript variant X3	XM_017007325.2:c.78C>T	A [GCC] > A [GCT]	Coding Sequence Variant
extracellular calcium-sensing receptor isoform X1	XP_016862814.1:p.Ala26=	A (Ala) > A (Ala)	Synonymous Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: G (allele ID: 190256 )

ClinVar Accession	Disease Names	Clinical Significance
RCV000173117.3	not specified	Benign
RCV000267011.3	Familial hypoparathyroidism	Benign
RCV000305712.3	Autosomal dominant hypocalcemia 1	Benign
RCV000353506.3	Familial hypocalciuric hypercalcemia 1	Benign
RCV000357932.3	Neonatal severe primary hyperparathyroidism	Benign
RCV000458475.9	Autosomal dominant hypocalcemia 1,Familial hypocalciuric hypercalcemia	Benign
RCV001026928.1	Inborn genetic diseases	Benign
RCV001668328.2	not provided	Benign

Allele: T (allele ID: 451988 )

ClinVar Accession	Disease Names	Clinical Significance
RCV000552276.7	Autosomal dominant hypocalcemia 1,Familial hypocalciuric hypercalcemia	Likely-Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	G	T
GRCh38.p14 chr 3	NC_000003.12:g.122254267=	NC_000003.12:g.122254267C>A	NC_000003.12:g.122254267C>G	NC_000003.12:g.122254267C>T
GRCh37.p13 chr 3	NC_000003.11:g.121973114=	NC_000003.11:g.121973114C>A	NC_000003.11:g.121973114C>G	NC_000003.11:g.121973114C>T
CASR RefSeqGene	NG_009058.2:g.75600=	NG_009058.2:g.75600C>A	NG_009058.2:g.75600C>G	NG_009058.2:g.75600C>T
CASR transcript variant 2	NM_000388.4:c.78=	NM_000388.4:c.78C>A	NM_000388.4:c.78C>G	NM_000388.4:c.78C>T
CASR transcript variant 2	NM_000388.3:c.78=	NM_000388.3:c.78C>A	NM_000388.3:c.78C>G	NM_000388.3:c.78C>T
CASR transcript variant 1	NM_001178065.2:c.78=	NM_001178065.2:c.78C>A	NM_001178065.2:c.78C>G	NM_001178065.2:c.78C>T
CASR transcript variant 1	NM_001178065.1:c.78=	NM_001178065.1:c.78C>A	NM_001178065.1:c.78C>G	NM_001178065.1:c.78C>T
CASR transcript variant X1	XM_006713789.4:c.78=	XM_006713789.4:c.78C>A	XM_006713789.4:c.78C>G	XM_006713789.4:c.78C>T
CASR transcript variant X2	XM_006713789.3:c.78=	XM_006713789.3:c.78C>A	XM_006713789.3:c.78C>G	XM_006713789.3:c.78C>T
CASR transcript variant X2	XM_006713789.2:c.78=	XM_006713789.2:c.78C>A	XM_006713789.2:c.78C>G	XM_006713789.2:c.78C>T
CASR transcript variant X3	XM_006713789.1:c.78=	XM_006713789.1:c.78C>A	XM_006713789.1:c.78C>G	XM_006713789.1:c.78C>T
CASR transcript variant X2	XM_017007324.2:c.78=	XM_017007324.2:c.78C>A	XM_017007324.2:c.78C>G	XM_017007324.2:c.78C>T
CASR transcript variant X1	XM_017007324.1:c.78=	XM_017007324.1:c.78C>A	XM_017007324.1:c.78C>G	XM_017007324.1:c.78C>T
CASR transcript variant X3	XM_017007325.2:c.78=	XM_017007325.2:c.78C>A	XM_017007325.2:c.78C>G	XM_017007325.2:c.78C>T
CASR transcript variant X3	XM_017007325.1:c.78=	XM_017007325.1:c.78C>A	XM_017007325.1:c.78C>G	XM_017007325.1:c.78C>T
CASR transcript variant X4	XM_047449065.1:c.-99=	XM_047449065.1:c.-99C>A	XM_047449065.1:c.-99C>G	XM_047449065.1:c.-99C>T
extracellular calcium-sensing receptor isoform 2 precursor	NP_000379.3:p.Ala26=	NP_000379.3:p.Ala26=	NP_000379.3:p.Ala26=	NP_000379.3:p.Ala26=
extracellular calcium-sensing receptor isoform 1 precursor	NP_001171536.2:p.Ala26=	NP_001171536.2:p.Ala26=	NP_001171536.2:p.Ala26=	NP_001171536.2:p.Ala26=
extracellular calcium-sensing receptor isoform X1	XP_006713852.1:p.Ala26=	XP_006713852.1:p.Ala26=	XP_006713852.1:p.Ala26=	XP_006713852.1:p.Ala26=
extracellular calcium-sensing receptor isoform X1	XP_016862813.1:p.Ala26=	XP_016862813.1:p.Ala26=	XP_016862813.1:p.Ala26=	XP_016862813.1:p.Ala26=
extracellular calcium-sensing receptor isoform X1	XP_016862814.1:p.Ala26=	XP_016862814.1:p.Ala26=	XP_016862814.1:p.Ala26=	XP_016862814.1:p.Ala26=
extracellular calcium-sensing receptor isoform 2 precursor	NP_000379.2:p.Ala26=	NP_000379.2:p.Ala26=	NP_000379.2:p.Ala26=	NP_000379.2:p.Ala26=
extracellular calcium-sensing receptor isoform 1 precursor	NP_001171536.1:p.Ala26=	NP_001171536.1:p.Ala26=	NP_001171536.1:p.Ala26=	NP_001171536.1:p.Ala26=

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

48 SubSNP, 19 Frequency, 9 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	BGI	ss103978811	Dec 01, 2009 (131)
2	SEATTLESEQ	ss159705912	Dec 01, 2009 (131)
3	1000GENOMES	ss239383720	Jul 15, 2010 (132)
4	GMI	ss277324537	May 04, 2012 (137)
5	ILLUMINA	ss481544999	May 04, 2012 (137)
6	ILLUMINA	ss484446606	May 04, 2012 (137)
7	1000GENOMES	ss489895672	May 04, 2012 (137)
8	GSK-GENETICS	ss491268196	May 04, 2012 (137)
9	ILLUMINA	ss534310524	Sep 08, 2015 (146)
10	SSMP	ss650619123	Apr 25, 2013 (138)
11	NHLBI-ESP	ss712548865	Apr 25, 2013 (138)
12	ILLUMINA	ss781508131	Aug 21, 2014 (142)
13	ILLUMINA	ss834568253	Aug 21, 2014 (142)
14	1000GENOMES	ss1305904395	Aug 21, 2014 (142)
15	BGI	ss1558287749	Apr 01, 2015 (144)
16	EVA_EXAC	ss1687167011	Apr 01, 2015 (144)
17	EVA_EXAC	ss1687167012	Apr 01, 2015 (144)
18	HUMAN_LONGEVITY	ss2255347791	Dec 20, 2016 (150)
19	ILLUMINA	ss2634004367	Nov 08, 2017 (151)
20	GRF	ss2705224717	Nov 08, 2017 (151)
21	GNOMAD	ss2734003031	Nov 08, 2017 (151)
22	GNOMAD	ss2747081207	Nov 08, 2017 (151)
23	GNOMAD	ss2798413550	Nov 08, 2017 (151)
24	AFFY	ss2985267958	Nov 08, 2017 (151)
25	ILLUMINA	ss3628761532	Oct 12, 2018 (152)
26	ILLUMINA	ss3631947550	Oct 12, 2018 (152)
27	ILLUMINA	ss3654037065	Oct 12, 2018 (152)
28	EVA	ss3760612683	Jul 13, 2019 (153)
29	KHV_HUMAN_GENOMES	ss3803747763	Jul 13, 2019 (153)
30	EVA	ss3823947307	Apr 25, 2020 (154)
31	SGDP_PRJ	ss3856836127	Apr 25, 2020 (154)
32	KRGDB	ss3902834231	Apr 25, 2020 (154)
33	KOGIC	ss3952282559	Apr 25, 2020 (154)
34	EVA	ss3986251305	Apr 27, 2021 (155)
35	TOPMED	ss4581498253	Apr 27, 2021 (155)
36	TOPMED	ss4581498254	Apr 27, 2021 (155)
37	TOMMO_GENOMICS	ss5161299813	Apr 27, 2021 (155)
38	EVA	ss5236999524	Apr 27, 2021 (155)
39	1000G_HIGH_COVERAGE	ss5255809278	Oct 12, 2022 (156)
40	TRAN_CS_UWATERLOO	ss5314408034	Oct 12, 2022 (156)
41	EVA	ss5342867797	Oct 12, 2022 (156)
42	HUGCELL_USP	ss5454977274	Oct 12, 2022 (156)
43	1000G_HIGH_COVERAGE	ss5535139795	Oct 12, 2022 (156)
44	SANFORD_IMAGENETICS	ss5633065918	Oct 12, 2022 (156)
45	TOMMO_GENOMICS	ss5694089519	Oct 12, 2022 (156)
46	YY_MCH	ss5804188762	Oct 12, 2022 (156)
47	EVA	ss5870754040	Oct 12, 2022 (156)
48	EVA	ss5961409529	Oct 12, 2022 (156)
49	1000Genomes	NC_000003.11 - 121973114	Oct 12, 2018 (152)
50	1000Genomes_30x	NC_000003.12 - 122254267	Oct 12, 2022 (156)
51	ExAC Submission ignored due to conflicting rows: Row 7103613 (NC_000003.11:121973113:C:C 120741/121278, NC_000003.11:121973113:C:G 537/121278) Row 7103614 (NC_000003.11:121973113:C:C 121255/121278, NC_000003.11:121973113:C:T 23/121278)	-	Oct 12, 2018 (152)
52	ExAC Submission ignored due to conflicting rows: Row 7103613 (NC_000003.11:121973113:C:C 120741/121278, NC_000003.11:121973113:C:G 537/121278) Row 7103614 (NC_000003.11:121973113:C:C 121255/121278, NC_000003.11:121973113:C:T 23/121278)	-	Oct 12, 2018 (152)
53	gnomAD - Genomes Submission ignored due to conflicting rows: Row 122005432 (NC_000003.12:122254266:C:G 192/140088) Row 122005433 (NC_000003.12:122254266:C:T 7/140088)	-	Apr 27, 2021 (155)
54	gnomAD - Genomes Submission ignored due to conflicting rows: Row 122005432 (NC_000003.12:122254266:C:G 192/140088) Row 122005433 (NC_000003.12:122254266:C:T 7/140088)	-	Apr 27, 2021 (155)
55	gnomAD - Exomes Submission ignored due to conflicting rows: Row 3089313 (NC_000003.11:121973113:C:C 251343/251344, NC_000003.11:121973113:C:A 1/251344) Row 3089314 (NC_000003.11:121973113:C:C 250230/251344, NC_000003.11:121973113:C:G 1114/251344) Row 3089315 (NC_000003.11:121973113:C:C 251301/251344, NC_000003.11:121973113:C:T 43/251344)	-	Jul 13, 2019 (153)
56	gnomAD - Exomes Submission ignored due to conflicting rows: Row 3089313 (NC_000003.11:121973113:C:C 251343/251344, NC_000003.11:121973113:C:A 1/251344) Row 3089314 (NC_000003.11:121973113:C:C 250230/251344, NC_000003.11:121973113:C:G 1114/251344) Row 3089315 (NC_000003.11:121973113:C:C 251301/251344, NC_000003.11:121973113:C:T 43/251344)	-	Jul 13, 2019 (153)
57	gnomAD - Exomes Submission ignored due to conflicting rows: Row 3089313 (NC_000003.11:121973113:C:C 251343/251344, NC_000003.11:121973113:C:A 1/251344) Row 3089314 (NC_000003.11:121973113:C:C 250230/251344, NC_000003.11:121973113:C:G 1114/251344) Row 3089315 (NC_000003.11:121973113:C:C 251301/251344, NC_000003.11:121973113:C:T 43/251344)	-	Jul 13, 2019 (153)
58	GO Exome Sequencing Project	NC_000003.11 - 121973114	Oct 12, 2018 (152)
59	KOREAN population from KRGDB	NC_000003.11 - 121973114	Apr 25, 2020 (154)
60	Korean Genome Project	NC_000003.12 - 122254267	Apr 25, 2020 (154)
61	SGDP_PRJ	NC_000003.11 - 121973114	Apr 25, 2020 (154)
62	8.3KJPN	NC_000003.11 - 121973114	Apr 27, 2021 (155)
63	14KJPN	NC_000003.12 - 122254267	Oct 12, 2022 (156)
64	TopMed Submission ignored due to conflicting rows: Row 418875808 (NC_000003.12:122254266:C:G 587/264690) Row 418875809 (NC_000003.12:122254266:C:T 21/264690)	-	Apr 27, 2021 (155)
65	TopMed Submission ignored due to conflicting rows: Row 418875808 (NC_000003.12:122254266:C:G 587/264690) Row 418875809 (NC_000003.12:122254266:C:T 21/264690)	-	Apr 27, 2021 (155)
66	A Vietnamese Genetic Variation Database	NC_000003.11 - 121973114	Jul 13, 2019 (153)
67	ALFA	NC_000003.12 - 122254267	Apr 27, 2021 (155)
68	ClinVar	RCV000173117.3	Oct 12, 2022 (156)
69	ClinVar	RCV000267011.3	Oct 12, 2022 (156)
70	ClinVar	RCV000305712.3	Oct 12, 2022 (156)
71	ClinVar	RCV000353506.3	Oct 12, 2022 (156)
72	ClinVar	RCV000357932.3	Oct 12, 2022 (156)
73	ClinVar	RCV000458475.9	Oct 12, 2022 (156)
74	ClinVar	RCV000552276.7	Oct 12, 2022 (156)
75	ClinVar	RCV001026928.1	Apr 25, 2020 (154)
76	ClinVar	RCV001668328.2	Oct 12, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss2734003031	NC_000003.11:121973113:C:A	NC_000003.12:122254266:C:A	(self)
12120774052	NC_000003.12:122254266:C:A	NC_000003.12:122254266:C:A	(self)
ss277324537, ss484446606, ss491268196, ss1558287749	NC_000003.10:123455803:C:G	NC_000003.12:122254266:C:G	(self)
17158622, 405611, 10011625, 8853107, 19269120, 2083270, ss239383720, ss481544999, ss489895672, ss534310524, ss650619123, ss712548865, ss781508131, ss834568253, ss1305904395, ss1687167011, ss2634004367, ss2705224717, ss2734003031, ss2747081207, ss2798413550, ss2985267958, ss3628761532, ss3631947550, ss3654037065, ss3760612683, ss3823947307, ss3856836127, ss3902834231, ss3986251305, ss5161299813, ss5342867797, ss5633065918, ss5961409529	NC_000003.11:121973113:C:G	NC_000003.12:122254266:C:G	(self)
RCV000173117.3, RCV000267011.3, RCV000305712.3, RCV000353506.3, RCV000357932.3, RCV000458475.9, RCV001026928.1, RCV001668328.2, 22665730, 8660560, 27926623, 12120774052, ss2255347791, ss3803747763, ss3952282559, ss4581498253, ss5236999524, ss5255809278, ss5314408034, ss5454977274, ss5535139795, ss5694089519, ss5804188762, ss5870754040	NC_000003.12:122254266:C:G	NC_000003.12:122254266:C:G	(self)
ss103978811, ss159705912	NT_005612.16:28468259:C:G	NC_000003.12:122254266:C:G	(self)
ss1687167012, ss2734003031, ss2747081207, ss2798413550	NC_000003.11:121973113:C:T	NC_000003.12:122254266:C:T	(self)
RCV000552276.7, 12120774052, ss4581498254	NC_000003.12:122254266:C:T	NC_000003.12:122254266:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs77852524

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs77852524