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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs7776426

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr6:129831375 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.449971 (168552/374584, ALFA)
C=0.345612 (91480/264690, TOPMED)
C=0.366945 (51387/140040, GnomAD) (+ 25 more)
C=0.367413 (44285/120532, ExAC)
C=0.24011 (18896/78696, PAGE_STUDY)
C=0.12627 (3568/28258, 14KJPN)
C=0.12936 (2168/16760, 8.3KJPN)
C=0.39995 (5201/13004, GO-ESP)
C=0.2406 (1541/6404, 1000G_30x)
C=0.2426 (1215/5008, 1000G)
C=0.4616 (2068/4480, Estonian)
C=0.4933 (1901/3854, ALSPAC)
C=0.4755 (1763/3708, TWINSUK)
C=0.1253 (367/2930, KOREAN)
C=0.2404 (501/2084, HGDP_Stanford)
C=0.2524 (476/1886, HapMap)
C=0.1283 (235/1832, Korea1K)
C=0.3750 (417/1112, Daghestan)
A=0.499 (498/998, GoNL)
C=0.132 (81/614, Vietnamese)
C=0.468 (281/600, NorthernSweden)
C=0.448 (239/534, MGP)
C=0.355 (108/304, FINRISK)
A=0.411 (92/224, SGDP_PRJ)
C=0.269 (58/216, Qatari)
A=0.41 (22/54, Ancient Sardinia)
A=0.45 (18/40, GENOME_DK)
A=0.46 (13/28, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
TMEM244 : Missense Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 390926 A=0.552015 C=0.447985
European Sub 329788 A=0.523670 C=0.476330
African Sub 16316 A=0.76054 C=0.23946
African Others Sub 592 A=0.802 C=0.198
African American Sub 15724 A=0.75897 C=0.24103
Asian Sub 6980 A=0.8696 C=0.1304
East Asian Sub 5012 A=0.8751 C=0.1249
Other Asian Sub 1968 A=0.8557 C=0.1443
Latin American 1 Sub 1486 A=0.6635 C=0.3365
Latin American 2 Sub 7206 A=0.7673 C=0.2327
South Asian Sub 5226 A=0.7302 C=0.2698
Other Sub 23924 A=0.59718 C=0.40282


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 374584 A=0.550029 C=0.449971
Allele Frequency Aggregator European Sub 319666 A=0.523625 C=0.476375
Allele Frequency Aggregator Other Sub 22486 A=0.59971 C=0.40029
Allele Frequency Aggregator African Sub 11534 A=0.75958 C=0.24042
Allele Frequency Aggregator Latin American 2 Sub 7206 A=0.7673 C=0.2327
Allele Frequency Aggregator Asian Sub 6980 A=0.8696 C=0.1304
Allele Frequency Aggregator South Asian Sub 5226 A=0.7302 C=0.2698
Allele Frequency Aggregator Latin American 1 Sub 1486 A=0.6635 C=0.3365
TopMed Global Study-wide 264690 A=0.654388 C=0.345612
gnomAD - Genomes Global Study-wide 140040 A=0.633055 C=0.366945
gnomAD - Genomes European Sub 75826 A=0.53413 C=0.46587
gnomAD - Genomes African Sub 41984 A=0.76877 C=0.23123
gnomAD - Genomes American Sub 13642 A=0.71632 C=0.28368
gnomAD - Genomes Ashkenazi Jewish Sub 3312 A=0.6063 C=0.3937
gnomAD - Genomes East Asian Sub 3122 A=0.8652 C=0.1348
gnomAD - Genomes Other Sub 2154 A=0.6476 C=0.3524
ExAC Global Study-wide 120532 A=0.632587 C=0.367413
ExAC Europe Sub 72970 A=0.53219 C=0.46781
ExAC Asian Sub 24958 A=0.78472 C=0.21528
ExAC American Sub 11474 A=0.81741 C=0.18259
ExAC African Sub 10236 A=0.77003 C=0.22997
ExAC Other Sub 894 A=0.634 C=0.366
The PAGE Study Global Study-wide 78696 A=0.75989 C=0.24011
The PAGE Study AfricanAmerican Sub 32510 A=0.76340 C=0.23660
The PAGE Study Mexican Sub 10810 A=0.77743 C=0.22257
The PAGE Study Asian Sub 8318 A=0.8627 C=0.1373
The PAGE Study PuertoRican Sub 7918 A=0.7048 C=0.2952
The PAGE Study NativeHawaiian Sub 4534 A=0.8262 C=0.1738
The PAGE Study Cuban Sub 4230 A=0.5993 C=0.4007
The PAGE Study Dominican Sub 3828 A=0.6899 C=0.3101
The PAGE Study CentralAmerican Sub 2450 A=0.7906 C=0.2094
The PAGE Study SouthAmerican Sub 1982 A=0.7619 C=0.2381
The PAGE Study NativeAmerican Sub 1260 A=0.6429 C=0.3571
The PAGE Study SouthAsian Sub 856 A=0.750 C=0.250
14KJPN JAPANESE Study-wide 28258 A=0.87373 C=0.12627
8.3KJPN JAPANESE Study-wide 16760 A=0.87064 C=0.12936
GO Exome Sequencing Project Global Study-wide 13004 A=0.60005 C=0.39995
GO Exome Sequencing Project European American Sub 8600 A=0.5237 C=0.4763
GO Exome Sequencing Project African American Sub 4404 A=0.7491 C=0.2509
1000Genomes_30x Global Study-wide 6404 A=0.7594 C=0.2406
1000Genomes_30x African Sub 1786 A=0.8219 C=0.1781
1000Genomes_30x Europe Sub 1266 A=0.5403 C=0.4597
1000Genomes_30x South Asian Sub 1202 A=0.7945 C=0.2055
1000Genomes_30x East Asian Sub 1170 A=0.8675 C=0.1325
1000Genomes_30x American Sub 980 A=0.756 C=0.244
1000Genomes Global Study-wide 5008 A=0.7574 C=0.2426
1000Genomes African Sub 1322 A=0.8177 C=0.1823
1000Genomes East Asian Sub 1008 A=0.8641 C=0.1359
1000Genomes Europe Sub 1006 A=0.5417 C=0.4583
1000Genomes South Asian Sub 978 A=0.789 C=0.211
1000Genomes American Sub 694 A=0.755 C=0.245
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.5384 C=0.4616
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.5067 C=0.4933
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.5245 C=0.4755
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.8747 C=0.1253
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 A=0.7596 C=0.2404
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.855 C=0.145
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.717 C=0.283
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.680 C=0.320
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.519 C=0.481
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.897 C=0.103
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.977 C=0.023
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.72 C=0.28
HapMap Global Study-wide 1886 A=0.7476 C=0.2524
HapMap American Sub 770 A=0.723 C=0.277
HapMap African Sub 688 A=0.782 C=0.218
HapMap Asian Sub 254 A=0.890 C=0.110
HapMap Europe Sub 174 A=0.511 C=0.489
Korean Genome Project KOREAN Study-wide 1832 A=0.8717 C=0.1283
Genome-wide autozygosity in Daghestan Global Study-wide 1112 A=0.6250 C=0.3750
Genome-wide autozygosity in Daghestan Daghestan Sub 616 A=0.594 C=0.406
Genome-wide autozygosity in Daghestan Near_East Sub 142 A=0.669 C=0.331
Genome-wide autozygosity in Daghestan Central Asia Sub 118 A=0.712 C=0.288
Genome-wide autozygosity in Daghestan Europe Sub 104 A=0.558 C=0.442
Genome-wide autozygosity in Daghestan South Asian Sub 98 A=0.79 C=0.21
Genome-wide autozygosity in Daghestan Caucasus Sub 34 A=0.44 C=0.56
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.499 C=0.501
A Vietnamese Genetic Variation Database Global Study-wide 614 A=0.868 C=0.132
Northern Sweden ACPOP Study-wide 600 A=0.532 C=0.468
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 A=0.552 C=0.448
FINRISK Finnish from FINRISK project Study-wide 304 A=0.645 C=0.355
SGDP_PRJ Global Study-wide 224 A=0.411 C=0.589
Qatari Global Study-wide 216 A=0.731 C=0.269
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 54 A=0.41 C=0.59
The Danish reference pan genome Danish Study-wide 40 A=0.45 C=0.55
Siberian Global Study-wide 28 A=0.46 C=0.54
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 6 NC_000006.12:g.129831375A>C
GRCh38.p14 chr 6 NC_000006.12:g.129831375A>T
GRCh37.p13 chr 6 NC_000006.11:g.130152520A>C
GRCh37.p13 chr 6 NC_000006.11:g.130152520A>T
Gene: TMEM244, transmembrane protein 244 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
TMEM244 transcript NM_001010876.2:c.331T>G F [TTC] > V [GTC] Coding Sequence Variant
putative transmembrane protein 244 NP_001010876.1:p.Phe111Val F (Phe) > V (Val) Missense Variant
TMEM244 transcript NM_001010876.2:c.331T>A F [TTC] > I [ATC] Coding Sequence Variant
putative transmembrane protein 244 NP_001010876.1:p.Phe111Ile F (Phe) > I (Ile) Missense Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C T
GRCh38.p14 chr 6 NC_000006.12:g.129831375= NC_000006.12:g.129831375A>C NC_000006.12:g.129831375A>T
GRCh37.p13 chr 6 NC_000006.11:g.130152520= NC_000006.11:g.130152520A>C NC_000006.11:g.130152520A>T
TMEM244 transcript NM_001010876.2:c.331= NM_001010876.2:c.331T>G NM_001010876.2:c.331T>A
TMEM244 transcript NM_001010876.1:c.331= NM_001010876.1:c.331T>G NM_001010876.1:c.331T>A
putative transmembrane protein 244 NP_001010876.1:p.Phe111= NP_001010876.1:p.Phe111Val NP_001010876.1:p.Phe111Ile
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

182 SubSNP, 30 Frequency submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss11842509 Jul 11, 2003 (116)
2 CSHL-HAPMAP ss17134443 Feb 27, 2004 (120)
3 SSAHASNP ss22429214 Apr 05, 2004 (121)
4 PERLEGEN ss24446655 Sep 20, 2004 (123)
5 ABI ss44710580 Mar 14, 2006 (126)
6 ILLUMINA ss65773673 Oct 14, 2006 (127)
7 ILLUMINA ss66547245 Nov 29, 2006 (127)
8 ILLUMINA ss67829356 Nov 29, 2006 (127)
9 ILLUMINA ss67990429 Nov 29, 2006 (127)
10 PERLEGEN ss68991178 May 16, 2007 (127)
11 ILLUMINA ss70949168 May 24, 2008 (130)
12 ILLUMINA ss71554962 May 16, 2007 (127)
13 AFFY ss74810583 Aug 16, 2007 (128)
14 ILLUMINA ss75743245 Dec 06, 2007 (129)
15 SI_EXO ss76890304 Dec 06, 2007 (129)
16 ILLUMINA ss79269609 Dec 15, 2007 (130)
17 KRIBB_YJKIM ss84723402 Dec 15, 2007 (130)
18 BCMHGSC_JDW ss93559722 Mar 24, 2008 (129)
19 HUMANGENOME_JCVI ss98431648 Feb 05, 2009 (130)
20 1000GENOMES ss110916339 Jan 25, 2009 (130)
21 ILLUMINA ss122831965 Dec 01, 2009 (131)
22 ENSEMBL ss144172887 Dec 01, 2009 (131)
23 ENSEMBL ss144304763 Dec 01, 2009 (131)
24 ILLUMINA ss154446555 Dec 01, 2009 (131)
25 ILLUMINA ss159621358 Dec 01, 2009 (131)
26 SEATTLESEQ ss159713487 Dec 01, 2009 (131)
27 ILLUMINA ss160913783 Dec 01, 2009 (131)
28 COMPLETE_GENOMICS ss162813050 Jul 04, 2010 (132)
29 ILLUMINA ss172345904 Jul 04, 2010 (132)
30 ILLUMINA ss174542654 Jul 04, 2010 (132)
31 BCM-HGSC-SUB ss207545016 Jul 04, 2010 (132)
32 1000GENOMES ss211924749 Jul 14, 2010 (132)
33 1000GENOMES ss222675272 Jul 14, 2010 (132)
34 1000GENOMES ss233684108 Jul 15, 2010 (132)
35 1000GENOMES ss240698120 Jul 15, 2010 (132)
36 GMI ss279022235 May 04, 2012 (137)
37 GMI ss285505187 Apr 25, 2013 (138)
38 PJP ss293724437 May 09, 2011 (134)
39 NHLBI-ESP ss342222655 May 09, 2011 (134)
40 ILLUMINA ss481671929 May 04, 2012 (137)
41 ILLUMINA ss481702675 May 04, 2012 (137)
42 ILLUMINA ss482670210 Sep 08, 2015 (146)
43 ILLUMINA ss485630607 May 04, 2012 (137)
44 1000GENOMES ss490934117 May 04, 2012 (137)
45 EXOME_CHIP ss491391525 May 04, 2012 (137)
46 CLINSEQ_SNP ss491896340 May 04, 2012 (137)
47 ILLUMINA ss537512833 Sep 08, 2015 (146)
48 TISHKOFF ss559524255 Apr 25, 2013 (138)
49 SSMP ss653765889 Apr 25, 2013 (138)
50 ILLUMINA ss778985774 Aug 21, 2014 (142)
51 ILLUMINA ss780853840 Aug 21, 2014 (142)
52 ILLUMINA ss783260900 Aug 21, 2014 (142)
53 ILLUMINA ss783537822 Aug 21, 2014 (142)
54 ILLUMINA ss784214340 Aug 21, 2014 (142)
55 ILLUMINA ss825600127 Apr 01, 2015 (144)
56 ILLUMINA ss832521815 Apr 01, 2015 (144)
57 ILLUMINA ss833132275 Aug 21, 2014 (142)
58 ILLUMINA ss833723103 Aug 21, 2014 (142)
59 ILLUMINA ss834447976 Aug 21, 2014 (142)
60 JMKIDD_LAB ss974461976 Aug 21, 2014 (142)
61 EVA-GONL ss983502962 Aug 21, 2014 (142)
62 JMKIDD_LAB ss1067482808 Aug 21, 2014 (142)
63 JMKIDD_LAB ss1074035912 Aug 21, 2014 (142)
64 1000GENOMES ss1322284060 Aug 21, 2014 (142)
65 HAMMER_LAB ss1397470885 Sep 08, 2015 (146)
66 DDI ss1430896017 Apr 01, 2015 (144)
67 EVA_GENOME_DK ss1581898472 Apr 01, 2015 (144)
68 EVA_FINRISK ss1584049047 Apr 01, 2015 (144)
69 EVA_DECODE ss1593071076 Apr 01, 2015 (144)
70 EVA_UK10K_ALSPAC ss1616699708 Apr 01, 2015 (144)
71 EVA_UK10K_TWINSUK ss1659693741 Apr 01, 2015 (144)
72 EVA_EXAC ss1688493290 Apr 01, 2015 (144)
73 EVA_MGP ss1711142847 Apr 01, 2015 (144)
74 EVA_SVP ss1712900025 Apr 01, 2015 (144)
75 ILLUMINA ss1752601208 Sep 08, 2015 (146)
76 ILLUMINA ss1752601209 Sep 08, 2015 (146)
77 HAMMER_LAB ss1804672179 Sep 08, 2015 (146)
78 ILLUMINA ss1917810584 Feb 12, 2016 (147)
79 WEILL_CORNELL_DGM ss1926746922 Feb 12, 2016 (147)
80 ILLUMINA ss1946191140 Feb 12, 2016 (147)
81 ILLUMINA ss1946191141 Feb 12, 2016 (147)
82 ILLUMINA ss1958950379 Feb 12, 2016 (147)
83 ILLUMINA ss1958950380 Feb 12, 2016 (147)
84 GENOMED ss1970526413 Jul 19, 2016 (147)
85 JJLAB ss2024029650 Sep 14, 2016 (149)
86 USC_VALOUEV ss2152223608 Dec 20, 2016 (150)
87 HUMAN_LONGEVITY ss2288413784 Dec 20, 2016 (150)
88 ILLUMINA ss2634511095 Nov 08, 2017 (151)
89 GRF ss2707854472 Nov 08, 2017 (151)
90 ILLUMINA ss2711090566 Nov 08, 2017 (151)
91 GNOMAD ss2736058261 Nov 08, 2017 (151)
92 GNOMAD ss2747702141 Nov 08, 2017 (151)
93 GNOMAD ss2845161080 Nov 08, 2017 (151)
94 AFFY ss2985384511 Nov 08, 2017 (151)
95 SWEGEN ss2999956731 Nov 08, 2017 (151)
96 ILLUMINA ss3022666176 Nov 08, 2017 (151)
97 ILLUMINA ss3022666177 Nov 08, 2017 (151)
98 EVA_SAMSUNG_MC ss3023062477 Nov 08, 2017 (151)
99 BIOINF_KMB_FNS_UNIBA ss3025808485 Nov 08, 2017 (151)
100 CSHL ss3347229891 Nov 08, 2017 (151)
101 ILLUMINA ss3625913729 Oct 12, 2018 (152)
102 ILLUMINA ss3629655553 Oct 12, 2018 (152)
103 ILLUMINA ss3629655554 Oct 12, 2018 (152)
104 ILLUMINA ss3632424354 Oct 12, 2018 (152)
105 ILLUMINA ss3633437501 Oct 12, 2018 (152)
106 ILLUMINA ss3634161079 Oct 12, 2018 (152)
107 ILLUMINA ss3635088084 Oct 12, 2018 (152)
108 ILLUMINA ss3635088085 Oct 12, 2018 (152)
109 ILLUMINA ss3635841528 Oct 12, 2018 (152)
110 ILLUMINA ss3636813360 Oct 12, 2018 (152)
111 ILLUMINA ss3637594395 Oct 12, 2018 (152)
112 ILLUMINA ss3638657045 Oct 12, 2018 (152)
113 ILLUMINA ss3639329598 Oct 12, 2018 (152)
114 ILLUMINA ss3639691732 Oct 12, 2018 (152)
115 ILLUMINA ss3640795384 Oct 12, 2018 (152)
116 ILLUMINA ss3640795385 Oct 12, 2018 (152)
117 ILLUMINA ss3643596191 Oct 12, 2018 (152)
118 ILLUMINA ss3644924253 Oct 12, 2018 (152)
119 ILLUMINA ss3644924254 Oct 12, 2018 (152)
120 OMUKHERJEE_ADBS ss3646343902 Oct 12, 2018 (152)
121 URBANLAB ss3648472803 Oct 12, 2018 (152)
122 ILLUMINA ss3653188720 Oct 12, 2018 (152)
123 ILLUMINA ss3653188721 Oct 12, 2018 (152)
124 ILLUMINA ss3654147493 Oct 12, 2018 (152)
125 EGCUT_WGS ss3667872365 Jul 13, 2019 (153)
126 EVA_DECODE ss3718282861 Jul 13, 2019 (153)
127 ILLUMINA ss3726384058 Jul 13, 2019 (153)
128 ACPOP ss3733985701 Jul 13, 2019 (153)
129 ILLUMINA ss3744278675 Jul 13, 2019 (153)
130 ILLUMINA ss3744560714 Jul 13, 2019 (153)
131 ILLUMINA ss3745388015 Jul 13, 2019 (153)
132 ILLUMINA ss3745388016 Jul 13, 2019 (153)
133 EVA ss3765673672 Jul 13, 2019 (153)
134 PAGE_CC ss3771322762 Jul 13, 2019 (153)
135 ILLUMINA ss3772881406 Jul 13, 2019 (153)
136 ILLUMINA ss3772881407 Jul 13, 2019 (153)
137 PACBIO ss3785622036 Jul 13, 2019 (153)
138 PACBIO ss3790950011 Jul 13, 2019 (153)
139 PACBIO ss3795829281 Jul 13, 2019 (153)
140 KHV_HUMAN_GENOMES ss3808829405 Jul 13, 2019 (153)
141 EVA ss3824224143 Apr 26, 2020 (154)
142 EVA ss3825523689 Apr 26, 2020 (154)
143 EVA ss3825707242 Apr 26, 2020 (154)
144 EVA ss3830193177 Apr 26, 2020 (154)
145 EVA ss3838584212 Apr 26, 2020 (154)
146 EVA ss3844034217 Apr 26, 2020 (154)
147 HGDP ss3847850756 Apr 26, 2020 (154)
148 SGDP_PRJ ss3865713419 Apr 26, 2020 (154)
149 KRGDB ss3912669045 Apr 26, 2020 (154)
150 KOGIC ss3960075728 Apr 26, 2020 (154)
151 FSA-LAB ss3984348550 Apr 26, 2021 (155)
152 FSA-LAB ss3984348551 Apr 26, 2021 (155)
153 EVA ss3985251929 Apr 26, 2021 (155)
154 EVA ss3986358861 Apr 26, 2021 (155)
155 EVA ss4017299565 Apr 26, 2021 (155)
156 TOPMED ss4721986551 Apr 26, 2021 (155)
157 TOMMO_GENOMICS ss5179946855 Apr 26, 2021 (155)
158 EVA ss5237027841 Apr 26, 2021 (155)
159 EVA ss5237407072 Apr 26, 2021 (155)
160 1000G_HIGH_COVERAGE ss5270359846 Oct 13, 2022 (156)
161 EVA ss5315190530 Oct 13, 2022 (156)
162 EVA ss5369030055 Oct 13, 2022 (156)
163 HUGCELL_USP ss5467799996 Oct 13, 2022 (156)
164 EVA ss5508709787 Oct 13, 2022 (156)
165 1000G_HIGH_COVERAGE ss5557312793 Oct 13, 2022 (156)
166 EVA ss5624160399 Oct 13, 2022 (156)
167 SANFORD_IMAGENETICS ss5624642193 Oct 13, 2022 (156)
168 SANFORD_IMAGENETICS ss5641496962 Oct 13, 2022 (156)
169 TOMMO_GENOMICS ss5718836137 Oct 13, 2022 (156)
170 EVA ss5799702398 Oct 13, 2022 (156)
171 EVA ss5800134331 Oct 13, 2022 (156)
172 YY_MCH ss5807961745 Oct 13, 2022 (156)
173 EVA ss5842991501 Oct 13, 2022 (156)
174 EVA ss5847303493 Oct 13, 2022 (156)
175 EVA ss5848113219 Oct 13, 2022 (156)
176 EVA ss5848667492 Oct 13, 2022 (156)
177 EVA ss5855583981 Oct 13, 2022 (156)
178 EVA ss5885966132 Oct 13, 2022 (156)
179 EVA ss5936533152 Oct 13, 2022 (156)
180 EVA ss5970176155 Oct 13, 2022 (156)
181 EVA ss5979802281 Oct 13, 2022 (156)
182 EVA ss5980393411 Oct 13, 2022 (156)
183 1000Genomes NC_000006.11 - 130152520 Oct 12, 2018 (152)
184 1000Genomes_30x NC_000006.12 - 129831375 Oct 13, 2022 (156)
185 The Avon Longitudinal Study of Parents and Children NC_000006.11 - 130152520 Oct 12, 2018 (152)
186 Genome-wide autozygosity in Daghestan NC_000006.10 - 130194213 Apr 26, 2020 (154)
187 Genetic variation in the Estonian population NC_000006.11 - 130152520 Oct 12, 2018 (152)
188 ExAC NC_000006.11 - 130152520 Oct 12, 2018 (152)
189 FINRISK NC_000006.11 - 130152520 Apr 26, 2020 (154)
190 The Danish reference pan genome NC_000006.11 - 130152520 Apr 26, 2020 (154)
191 gnomAD - Genomes NC_000006.12 - 129831375 Apr 26, 2021 (155)
192 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 5208979 (NC_000006.11:130152519:A:A 158964/247450, NC_000006.11:130152519:A:C 88486/247450)
Row 5208980 (NC_000006.11:130152519:A:A 247449/247450, NC_000006.11:130152519:A:T 1/247450)

- Jul 13, 2019 (153)
193 gnomAD - Exomes

Submission ignored due to conflicting rows:
Row 5208979 (NC_000006.11:130152519:A:A 158964/247450, NC_000006.11:130152519:A:C 88486/247450)
Row 5208980 (NC_000006.11:130152519:A:A 247449/247450, NC_000006.11:130152519:A:T 1/247450)

- Jul 13, 2019 (153)
194 GO Exome Sequencing Project NC_000006.11 - 130152520 Oct 12, 2018 (152)
195 Genome of the Netherlands Release 5 NC_000006.11 - 130152520 Apr 26, 2020 (154)
196 HGDP-CEPH-db Supplement 1 NC_000006.10 - 130194213 Apr 26, 2020 (154)
197 HapMap NC_000006.12 - 129831375 Apr 26, 2020 (154)
198 KOREAN population from KRGDB NC_000006.11 - 130152520 Apr 26, 2020 (154)
199 Korean Genome Project NC_000006.12 - 129831375 Apr 26, 2020 (154)
200 Medical Genome Project healthy controls from Spanish population NC_000006.11 - 130152520 Apr 26, 2020 (154)
201 Northern Sweden NC_000006.11 - 130152520 Jul 13, 2019 (153)
202 The PAGE Study NC_000006.12 - 129831375 Jul 13, 2019 (153)
203 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000006.11 - 130152520 Apr 26, 2021 (155)
204 Qatari NC_000006.11 - 130152520 Apr 26, 2020 (154)
205 SGDP_PRJ NC_000006.11 - 130152520 Apr 26, 2020 (154)
206 Siberian NC_000006.11 - 130152520 Apr 26, 2020 (154)
207 8.3KJPN NC_000006.11 - 130152520 Apr 26, 2021 (155)
208 14KJPN NC_000006.12 - 129831375 Oct 13, 2022 (156)
209 TopMed NC_000006.12 - 129831375 Apr 26, 2021 (155)
210 UK 10K study - Twins NC_000006.11 - 130152520 Oct 12, 2018 (152)
211 A Vietnamese Genetic Variation Database NC_000006.11 - 130152520 Jul 13, 2019 (153)
212 ALFA NC_000006.12 - 129831375 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17395737 Oct 08, 2004 (123)
rs52808693 Sep 21, 2007 (128)
rs58635664 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss3639329598, ss3639691732 NC_000006.9:130194212:A:C NC_000006.12:129831374:A:C (self)
445308, 528648, ss93559722, ss110916339, ss160913783, ss162813050, ss207545016, ss211924749, ss279022235, ss285505187, ss293724437, ss481671929, ss491896340, ss825600127, ss1397470885, ss1593071076, ss1712900025, ss3643596191, ss3847850756 NC_000006.10:130194212:A:C NC_000006.12:129831374:A:C (self)
34153708, 19031636, 13610613, 8539971, 45508, 8063411, 682137, 8477590, 19846439, 258607, 7270566, 477856, 8788852, 17730399, 4739962, 37916162, 19031636, 4237181, ss222675272, ss233684108, ss240698120, ss342222655, ss481702675, ss482670210, ss485630607, ss490934117, ss491391525, ss537512833, ss559524255, ss653765889, ss778985774, ss780853840, ss783260900, ss783537822, ss784214340, ss832521815, ss833132275, ss833723103, ss834447976, ss974461976, ss983502962, ss1067482808, ss1074035912, ss1322284060, ss1430896017, ss1581898472, ss1584049047, ss1616699708, ss1659693741, ss1688493290, ss1711142847, ss1752601208, ss1752601209, ss1804672179, ss1917810584, ss1926746922, ss1946191140, ss1946191141, ss1958950379, ss1958950380, ss1970526413, ss2024029650, ss2152223608, ss2634511095, ss2707854472, ss2711090566, ss2736058261, ss2747702141, ss2845161080, ss2985384511, ss2999956731, ss3022666176, ss3022666177, ss3023062477, ss3347229891, ss3625913729, ss3629655553, ss3629655554, ss3632424354, ss3633437501, ss3634161079, ss3635088084, ss3635088085, ss3635841528, ss3636813360, ss3637594395, ss3638657045, ss3640795384, ss3640795385, ss3644924253, ss3644924254, ss3646343902, ss3653188720, ss3653188721, ss3654147493, ss3667872365, ss3733985701, ss3744278675, ss3744560714, ss3745388015, ss3745388016, ss3765673672, ss3772881406, ss3772881407, ss3785622036, ss3790950011, ss3795829281, ss3824224143, ss3825523689, ss3825707242, ss3830193177, ss3838584212, ss3865713419, ss3912669045, ss3984348550, ss3984348551, ss3985251929, ss3986358861, ss4017299565, ss5179946855, ss5237407072, ss5315190530, ss5369030055, ss5508709787, ss5624160399, ss5624642193, ss5641496962, ss5799702398, ss5800134331, ss5842991501, ss5847303493, ss5848113219, ss5848667492, ss5936533152, ss5970176155, ss5979802281, ss5980393411 NC_000006.11:130152519:A:C NC_000006.12:129831374:A:C (self)
44838728, 241213427, 3248857, 16453729, 544231, 52673241, 559364109, 3807958273, ss2288413784, ss3025808485, ss3648472803, ss3718282861, ss3726384058, ss3771322762, ss3808829405, ss3844034217, ss3960075728, ss4721986551, ss5237027841, ss5270359846, ss5467799996, ss5557312793, ss5718836137, ss5807961745, ss5855583981, ss5885966132 NC_000006.12:129831374:A:C NC_000006.12:129831374:A:C (self)
ss11842509 NT_025741.12:34256948:A:C NC_000006.12:129831374:A:C (self)
ss17134443, ss22429214 NT_025741.13:34256948:A:C NC_000006.12:129831374:A:C (self)
ss76890304 NT_025741.14:34256948:A:C NC_000006.12:129831374:A:C (self)
ss24446655, ss44710580, ss65773673, ss66547245, ss67829356, ss67990429, ss68991178, ss70949168, ss71554962, ss74810583, ss75743245, ss79269609, ss84723402, ss98431648, ss122831965, ss144172887, ss144304763, ss154446555, ss159621358, ss159713487, ss172345904, ss174542654 NT_025741.15:34321976:A:C NC_000006.12:129831374:A:C (self)
NC_000006.11:130152519:A:T NC_000006.12:129831374:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs7776426

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07