Name: rs6921583
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs6921583

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr6:3442666 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.440583 (133198/302322, ALFA)
T=0.466293 (123423/264690, TOPMED)
T=0.468795 (65591/139914, GnomAD) (+ 21 more)
T=0.49354 (38834/78684, PAGE_STUDY)
T=0.42922 (12129/28258, 14KJPN)
T=0.43443 (7281/16760, 8.3KJPN)
T=0.4338 (2778/6404, 1000G_30x)
T=0.4247 (2127/5008, 1000G)
T=0.4864 (2179/4480, Estonian)
T=0.4403 (1697/3854, ALSPAC)
T=0.4318 (1601/3708, TWINSUK)
T=0.4638 (1359/2930, KOREAN)
T=0.4280 (892/2084, HGDP_Stanford)
T=0.4350 (823/1892, HapMap)
T=0.423 (422/998, GoNL)
T=0.383 (300/784, PRJEB37584)
T=0.500 (300/600, NorthernSweden)
C=0.500 (300/600, NorthernSweden)
T=0.260 (109/420, SGDP_PRJ)
T=0.356 (77/216, Qatari)
T=0.476 (101/212, Vietnamese)
C=0.46 (34/74, Ancient Sardinia)
T=0.47 (19/40, GENOME_DK)
T=0.33 (12/36, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: SLC22A23 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	307354	T=0.440896	C=0.559104
European	Sub	270506	T=0.438737	C=0.561263
African	Sub	9524	T=0.4840	C=0.5160
African Others	Sub	372	T=0.513	C=0.487
African American	Sub	9152	T=0.4828	C=0.5172
Asian	Sub	3940	T=0.4391	C=0.5609
East Asian	Sub	3194	T=0.4346	C=0.5654
Other Asian	Sub	746	T=0.458	C=0.542
Latin American 1	Sub	1134	T=0.4524	C=0.5476
Latin American 2	Sub	7218	T=0.5759	C=0.4241
South Asian	Sub	5220	T=0.2736	C=0.7264
Other	Sub	9812	T=0.4476	C=0.5524

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	302322	T=0.440583	C=0.559417
Allele Frequency Aggregator	European	Sub	267414	T=0.438530	C=0.561470
Allele Frequency Aggregator	Other	Sub	9012	T=0.4460	C=0.5540
Allele Frequency Aggregator	African	Sub	8384	T=0.4869	C=0.5131
Allele Frequency Aggregator	Latin American 2	Sub	7218	T=0.5759	C=0.4241
Allele Frequency Aggregator	South Asian	Sub	5220	T=0.2736	C=0.7264
Allele Frequency Aggregator	Asian	Sub	3940	T=0.4391	C=0.5609
Allele Frequency Aggregator	Latin American 1	Sub	1134	T=0.4524	C=0.5476
TopMed	Global	Study-wide	264690	T=0.466293	C=0.533707
gnomAD - Genomes	Global	Study-wide	139914	T=0.468795	C=0.531205
gnomAD - Genomes	European	Sub	75828	T=0.45456	C=0.54544
gnomAD - Genomes	African	Sub	41868	T=0.48419	C=0.51581
gnomAD - Genomes	American	Sub	13632	T=0.52017	C=0.47983
gnomAD - Genomes	Ashkenazi Jewish	Sub	3320	T=0.4039	C=0.5961
gnomAD - Genomes	East Asian	Sub	3118	T=0.4448	C=0.5552
gnomAD - Genomes	Other	Sub	2148	T=0.4804	C=0.5196
The PAGE Study	Global	Study-wide	78684	T=0.49354	C=0.50646
The PAGE Study	AfricanAmerican	Sub	32502	T=0.48046	C=0.51954
The PAGE Study	Mexican	Sub	10810	T=0.57613	C=0.42387
The PAGE Study	Asian	Sub	8318	T=0.4167	C=0.5833
The PAGE Study	PuertoRican	Sub	7916	T=0.4917	C=0.5083
The PAGE Study	NativeHawaiian	Sub	4534	T=0.6116	C=0.3884
The PAGE Study	Cuban	Sub	4230	T=0.4326	C=0.5674
The PAGE Study	Dominican	Sub	3826	T=0.4527	C=0.5473
The PAGE Study	CentralAmerican	Sub	2450	T=0.5649	C=0.4351
The PAGE Study	SouthAmerican	Sub	1982	T=0.5399	C=0.4601
The PAGE Study	NativeAmerican	Sub	1260	T=0.5032	C=0.4968
The PAGE Study	SouthAsian	Sub	856	T=0.244	C=0.756
14KJPN	JAPANESE	Study-wide	28258	T=0.42922	C=0.57078
8.3KJPN	JAPANESE	Study-wide	16760	T=0.43443	C=0.56557
1000Genomes_30x	Global	Study-wide	6404	T=0.4338	C=0.5662
1000Genomes_30x	African	Sub	1786	T=0.4810	C=0.5190
1000Genomes_30x	Europe	Sub	1266	T=0.4487	C=0.5513
1000Genomes_30x	South Asian	Sub	1202	T=0.2379	C=0.7621
1000Genomes_30x	East Asian	Sub	1170	T=0.4402	C=0.5598
1000Genomes_30x	American	Sub	980	T=0.561	C=0.439
1000Genomes	Global	Study-wide	5008	T=0.4247	C=0.5753
1000Genomes	African	Sub	1322	T=0.4818	C=0.5182
1000Genomes	East Asian	Sub	1008	T=0.4266	C=0.5734
1000Genomes	Europe	Sub	1006	T=0.4493	C=0.5507
1000Genomes	South Asian	Sub	978	T=0.226	C=0.774
1000Genomes	American	Sub	694	T=0.558	C=0.442
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.4864	C=0.5136
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.4403	C=0.5597
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.4318	C=0.5682
KOREAN population from KRGDB	KOREAN	Study-wide	2930	T=0.4638	A=0.0000, C=0.5362
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	T=0.4280	C=0.5720
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	T=0.391	C=0.609
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	T=0.331	C=0.669
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	T=0.277	C=0.723
HGDP-CEPH-db Supplement 1	Europe	Sub	320	T=0.409	C=0.591
HGDP-CEPH-db Supplement 1	Africa	Sub	242	T=0.653	C=0.347
HGDP-CEPH-db Supplement 1	America	Sub	216	T=0.694	C=0.306
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	T=0.49	C=0.51
HapMap	Global	Study-wide	1892	T=0.4350	C=0.5650
HapMap	American	Sub	770	T=0.410	C=0.590
HapMap	African	Sub	692	T=0.484	C=0.516
HapMap	Asian	Sub	254	T=0.409	C=0.591
HapMap	Europe	Sub	176	T=0.386	C=0.614
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.423	C=0.577
CNV burdens in cranial meningiomas	Global	Study-wide	784	T=0.383	C=0.617
CNV burdens in cranial meningiomas	CRM	Sub	784	T=0.383	C=0.617
Northern Sweden	ACPOP	Study-wide	600	T=0.500	C=0.500
SGDP_PRJ	Global	Study-wide	420	T=0.260	C=0.740
Qatari	Global	Study-wide	216	T=0.356	C=0.644
A Vietnamese Genetic Variation Database	Global	Study-wide	212	T=0.476	C=0.524
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	74	T=0.54	C=0.46
The Danish reference pan genome	Danish	Study-wide	40	T=0.47	C=0.53
Siberian	Global	Study-wide	36	T=0.33	C=0.67

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 6	NC_000006.12:g.3442666T>A
GRCh38.p14 chr 6	NC_000006.12:g.3442666T>C
GRCh37.p13 chr 6	NC_000006.11:g.3442900T>A
GRCh37.p13 chr 6	NC_000006.11:g.3442900T>C

Gene: SLC22A23, solute carrier family 22 member 23 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
SLC22A23 transcript variant 3	NM_001286455.1:c.-190+215… NM_001286455.1:c.-190+2153A>T	N/A	Intron Variant
SLC22A23 transcript variant 4	NM_001286456.2:c.654+1324… NM_001286456.2:c.654+13240A>T	N/A	Intron Variant
SLC22A23 transcript variant 6	NM_001382317.1:c.654+1324… NM_001382317.1:c.654+13240A>T	N/A	Intron Variant
SLC22A23 transcript variant 9	NM_001382320.1:c.654+1324… NM_001382320.1:c.654+13240A>T	N/A	Intron Variant
SLC22A23 transcript variant 1	NM_015482.2:c.654+13240A>T	N/A	Intron Variant
SLC22A23 transcript variant 2	NM_021945.6:c.-435+2153A>T	N/A	Intron Variant
SLC22A23 transcript variant 7	NM_001382318.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant 8	NM_001382319.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant 10	NM_001382321.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant 5	NR_104448.1:n.	N/A	Intron Variant
SLC22A23 transcript variant 11	NR_168069.1:n.	N/A	Intron Variant
SLC22A23 transcript variant X1	XM_011514801.3:c.655-4111… XM_011514801.3:c.655-4111A>T	N/A	Intron Variant
SLC22A23 transcript variant X3	XM_017011183.2:c.655-4111… XM_017011183.2:c.655-4111A>T	N/A	Intron Variant
SLC22A23 transcript variant X4	XM_017011185.3:c.655-4111… XM_017011185.3:c.655-4111A>T	N/A	Intron Variant
SLC22A23 transcript variant X11	XM_017011186.2:c.-262+215… XM_017011186.2:c.-262+2153A>T	N/A	Intron Variant
SLC22A23 transcript variant X12	XM_047419244.1:c.655-4111… XM_047419244.1:c.655-4111A>T	N/A	Intron Variant
SLC22A23 transcript variant X5	XM_017011180.2:c.-3310=	N/A	5 Prime UTR Variant
SLC22A23 transcript variant X7	XM_017011184.2:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant X6	XM_047419241.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant X8	XM_047419242.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant X9	XM_047419243.1:c.	N/A	Genic Upstream Transcript Variant
SLC22A23 transcript variant X2	XR_001743575.2:n.	N/A	Intron Variant
SLC22A23 transcript variant X10	XR_007059328.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C
GRCh38.p14 chr 6	NC_000006.12:g.3442666=	NC_000006.12:g.3442666T>A	NC_000006.12:g.3442666T>C
GRCh37.p13 chr 6	NC_000006.11:g.3442900=	NC_000006.11:g.3442900T>A	NC_000006.11:g.3442900T>C
SLC22A23 transcript variant X5	XM_017011180.2:c.-3310=	XM_017011180.2:c.-3310A>T	XM_017011180.2:c.-3310A>G
SLC22A23 transcript variant 3	NM_001286455.1:c.-190+2153=	NM_001286455.1:c.-190+2153A>T	NM_001286455.1:c.-190+2153A>G
SLC22A23 transcript variant 4	NM_001286456.2:c.654+13240=	NM_001286456.2:c.654+13240A>T	NM_001286456.2:c.654+13240A>G
SLC22A23 transcript variant 6	NM_001382317.1:c.654+13240=	NM_001382317.1:c.654+13240A>T	NM_001382317.1:c.654+13240A>G
SLC22A23 transcript variant 9	NM_001382320.1:c.654+13240=	NM_001382320.1:c.654+13240A>T	NM_001382320.1:c.654+13240A>G
SLC22A23 transcript variant 1	NM_015482.1:c.654+13240=	NM_015482.1:c.654+13240A>T	NM_015482.1:c.654+13240A>G
SLC22A23 transcript variant 1	NM_015482.2:c.654+13240=	NM_015482.2:c.654+13240A>T	NM_015482.2:c.654+13240A>G
SLC22A23 transcript variant 2	NM_021945.5:c.-435+2153=	NM_021945.5:c.-435+2153A>T	NM_021945.5:c.-435+2153A>G
SLC22A23 transcript variant 2	NM_021945.6:c.-435+2153=	NM_021945.6:c.-435+2153A>T	NM_021945.6:c.-435+2153A>G
SLC22A23 transcript variant X1	XM_005249285.1:c.654+13240=	XM_005249285.1:c.654+13240A>T	XM_005249285.1:c.654+13240A>G
SLC22A23 transcript variant X2	XM_005249286.1:c.-190+2153=	XM_005249286.1:c.-190+2153A>T	XM_005249286.1:c.-190+2153A>G
SLC22A23 transcript variant X1	XM_011514801.3:c.655-4111=	XM_011514801.3:c.655-4111A>T	XM_011514801.3:c.655-4111A>G
SLC22A23 transcript variant X3	XM_017011183.2:c.655-4111=	XM_017011183.2:c.655-4111A>T	XM_017011183.2:c.655-4111A>G
SLC22A23 transcript variant X4	XM_017011185.3:c.655-4111=	XM_017011185.3:c.655-4111A>T	XM_017011185.3:c.655-4111A>G
SLC22A23 transcript variant X11	XM_017011186.2:c.-262+2153=	XM_017011186.2:c.-262+2153A>T	XM_017011186.2:c.-262+2153A>G
SLC22A23 transcript variant X12	XM_047419244.1:c.655-4111=	XM_047419244.1:c.655-4111A>T	XM_047419244.1:c.655-4111A>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

134 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	BCM_SSAHASNP	ss10311024	Jul 11, 2003 (116)
2	SC_SNP	ss13153302	Dec 05, 2003 (119)
3	CSHL-HAPMAP	ss20262649	Feb 27, 2004 (120)
4	SSAHASNP	ss22379463	Apr 05, 2004 (121)
5	PERLEGEN	ss23410429	Sep 20, 2004 (123)
6	ABI	ss44736668	Mar 14, 2006 (126)
7	ILLUMINA	ss67516678	Nov 30, 2006 (127)
8	ILLUMINA	ss67882137	Nov 30, 2006 (127)
9	ILLUMINA	ss68263780	Dec 12, 2006 (127)
10	ILLUMINA	ss70895749	May 26, 2008 (130)
11	ILLUMINA	ss71489909	May 17, 2007 (127)
12	ILLUMINA	ss74960646	Dec 07, 2007 (129)
13	KRIBB_YJKIM	ss84576034	Dec 15, 2007 (130)
14	HUMANGENOME_JCVI	ss98468483	Feb 06, 2009 (130)
15	BGI	ss104273196	Dec 01, 2009 (131)
16	1000GENOMES	ss109703278	Jan 24, 2009 (130)
17	1000GENOMES	ss113811468	Jan 25, 2009 (130)
18	ENSEMBL	ss142506225	Dec 01, 2009 (131)
19	ILLUMINA	ss154392032	Dec 01, 2009 (131)
20	GMI	ss156458343	Dec 01, 2009 (131)
21	ILLUMINA	ss159567627	Dec 01, 2009 (131)
22	ILLUMINA	ss160825556	Dec 01, 2009 (131)
23	COMPLETE_GENOMICS	ss161970082	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss163068951	Jul 04, 2010 (132)
25	COMPLETE_GENOMICS	ss166038622	Jul 04, 2010 (132)
26	ILLUMINA	ss174168226	Jul 04, 2010 (132)
27	BUSHMAN	ss201339475	Jul 04, 2010 (132)
28	1000GENOMES	ss222173574	Jul 14, 2010 (132)
29	1000GENOMES	ss233298116	Jul 14, 2010 (132)
30	1000GENOMES	ss240389205	Jul 15, 2010 (132)
31	BL	ss253993334	May 09, 2011 (134)
32	GMI	ss278628460	May 04, 2012 (137)
33	GMI	ss285327957	Apr 25, 2013 (138)
34	PJP	ss293586042	May 09, 2011 (134)
35	ILLUMINA	ss481400608	May 04, 2012 (137)
36	ILLUMINA	ss481427200	May 04, 2012 (137)
37	ILLUMINA	ss482406443	Sep 08, 2015 (146)
38	ILLUMINA	ss485495260	May 04, 2012 (137)
39	ILLUMINA	ss537410470	Sep 08, 2015 (146)
40	TISHKOFF	ss558961726	Apr 25, 2013 (138)
41	SSMP	ss652872932	Apr 25, 2013 (138)
42	ILLUMINA	ss778956767	Aug 21, 2014 (142)
43	ILLUMINA	ss783193169	Aug 21, 2014 (142)
44	ILLUMINA	ss784148275	Aug 21, 2014 (142)
45	ILLUMINA	ss832453016	Apr 01, 2015 (144)
46	ILLUMINA	ss833078746	Aug 21, 2014 (142)
47	ILLUMINA	ss833669574	Aug 21, 2014 (142)
48	ILLUMINA	ss834418665	Aug 21, 2014 (142)
49	EVA-GONL	ss982520228	Aug 21, 2014 (142)
50	JMKIDD_LAB	ss1073332907	Aug 21, 2014 (142)
51	1000GENOMES	ss1318734045	Aug 21, 2014 (142)
52	DDI	ss1430617688	Apr 01, 2015 (144)
53	EVA_GENOME_DK	ss1581506113	Apr 01, 2015 (144)
54	EVA_DECODE	ss1592066092	Apr 01, 2015 (144)
55	EVA_UK10K_ALSPAC	ss1614819811	Apr 01, 2015 (144)
56	EVA_UK10K_TWINSUK	ss1657813844	Apr 01, 2015 (144)
57	EVA_SVP	ss1712830334	Apr 01, 2015 (144)
58	ILLUMINA	ss1752633450	Sep 08, 2015 (146)
59	WEILL_CORNELL_DGM	ss1925778027	Feb 12, 2016 (147)
60	ILLUMINA	ss1946165951	Feb 12, 2016 (147)
61	ILLUMINA	ss1958857405	Feb 12, 2016 (147)
62	GENOMED	ss1970295383	Jul 19, 2016 (147)
63	JJLAB	ss2023503533	Sep 14, 2016 (149)
64	USC_VALOUEV	ss2151665480	Dec 20, 2016 (150)
65	HUMAN_LONGEVITY	ss2281303076	Dec 20, 2016 (150)
66	SYSTEMSBIOZJU	ss2626240195	Nov 08, 2017 (151)
67	ILLUMINA	ss2634391159	Nov 08, 2017 (151)
68	GRF	ss2707250621	Nov 08, 2017 (151)
69	ILLUMINA	ss2711058206	Nov 08, 2017 (151)
70	GNOMAD	ss2835131364	Nov 08, 2017 (151)
71	SWEGEN	ss2998418505	Nov 08, 2017 (151)
72	ILLUMINA	ss3022568900	Nov 08, 2017 (151)
73	BIOINF_KMB_FNS_UNIBA	ss3025535139	Nov 08, 2017 (151)
74	CSHL	ss3346806686	Nov 08, 2017 (151)
75	ILLUMINA	ss3625892575	Oct 12, 2018 (152)
76	ILLUMINA	ss3629429258	Oct 12, 2018 (152)
77	ILLUMINA	ss3632311767	Oct 12, 2018 (152)
78	ILLUMINA	ss3633403681	Oct 12, 2018 (152)
79	ILLUMINA	ss3634125580	Oct 12, 2018 (152)
80	ILLUMINA	ss3635041328	Oct 12, 2018 (152)
81	ILLUMINA	ss3635806970	Oct 12, 2018 (152)
82	ILLUMINA	ss3636755740	Oct 12, 2018 (152)
83	ILLUMINA	ss3637559683	Oct 12, 2018 (152)
84	ILLUMINA	ss3638603293	Oct 12, 2018 (152)
85	ILLUMINA	ss3639304182	Oct 12, 2018 (152)
86	ILLUMINA	ss3639948612	Oct 12, 2018 (152)
87	ILLUMINA	ss3640748623	Oct 12, 2018 (152)
88	ILLUMINA	ss3643545434	Oct 12, 2018 (152)
89	ILLUMINA	ss3643993757	Oct 12, 2018 (152)
90	ILLUMINA	ss3644899011	Oct 12, 2018 (152)
91	URBANLAB	ss3648254587	Oct 12, 2018 (152)
92	ILLUMINA	ss3653076644	Oct 12, 2018 (152)
93	EGCUT_WGS	ss3666342121	Jul 13, 2019 (153)
94	EVA_DECODE	ss3716463067	Jul 13, 2019 (153)
95	ILLUMINA	ss3726305153	Jul 13, 2019 (153)
96	ACPOP	ss3733149017	Jul 13, 2019 (153)
97	ILLUMINA	ss3744265454	Jul 13, 2019 (153)
98	ILLUMINA	ss3745341451	Jul 13, 2019 (153)
99	EVA	ss3764537180	Jul 13, 2019 (153)
100	PAGE_CC	ss3771258198	Jul 13, 2019 (153)
101	ILLUMINA	ss3772835278	Jul 13, 2019 (153)
102	PACBIO	ss3785354992	Jul 13, 2019 (153)
103	PACBIO	ss3790723007	Jul 13, 2019 (153)
104	PACBIO	ss3795600166	Jul 13, 2019 (153)
105	KHV_HUMAN_GENOMES	ss3807698393	Jul 13, 2019 (153)
106	EVA	ss3829699084	Apr 26, 2020 (154)
107	EVA	ss3838323889	Apr 26, 2020 (154)
108	EVA	ss3843763720	Apr 26, 2020 (154)
109	HGDP	ss3847820362	Apr 26, 2020 (154)
110	SGDP_PRJ	ss3863792192	Apr 26, 2020 (154)
111	KRGDB	ss3910526058	Apr 26, 2020 (154)
112	EVA	ss3984560454	Apr 26, 2021 (155)
113	EVA	ss3985195158	Apr 26, 2021 (155)
114	EVA	ss4017251680	Apr 26, 2021 (155)
115	TOPMED	ss4691698411	Apr 26, 2021 (155)
116	TOMMO_GENOMICS	ss5175892912	Apr 26, 2021 (155)
117	1000G_HIGH_COVERAGE	ss5267190151	Oct 13, 2022 (156)
118	EVA	ss5315116739	Oct 13, 2022 (156)
119	EVA	ss5363427989	Oct 13, 2022 (156)
120	HUGCELL_USP	ss5465003410	Oct 13, 2022 (156)
121	EVA	ss5508329308	Oct 13, 2022 (156)
122	1000G_HIGH_COVERAGE	ss5552517225	Oct 13, 2022 (156)
123	SANFORD_IMAGENETICS	ss5624612895	Oct 13, 2022 (156)
124	SANFORD_IMAGENETICS	ss5639646224	Oct 13, 2022 (156)
125	TOMMO_GENOMICS	ss5713482664	Oct 13, 2022 (156)
126	EVA	ss5799673963	Oct 13, 2022 (156)
127	YY_MCH	ss5807098848	Oct 13, 2022 (156)
128	EVA	ss5841709630	Oct 13, 2022 (156)
129	EVA	ss5847282591	Oct 13, 2022 (156)
130	EVA	ss5848078709	Oct 13, 2022 (156)
131	EVA	ss5855175837	Oct 13, 2022 (156)
132	EVA	ss5882412027	Oct 13, 2022 (156)
133	EVA	ss5968139269	Oct 13, 2022 (156)
134	EVA	ss5979767968	Oct 13, 2022 (156)
135	1000Genomes	NC_000006.11 - 3442900	Oct 12, 2018 (152)
136	1000Genomes_30x	NC_000006.12 - 3442666	Oct 13, 2022 (156)
137	The Avon Longitudinal Study of Parents and Children	NC_000006.11 - 3442900	Oct 12, 2018 (152)
138	Genetic variation in the Estonian population	NC_000006.11 - 3442900	Oct 12, 2018 (152)
139	The Danish reference pan genome	NC_000006.11 - 3442900	Apr 26, 2020 (154)
140	gnomAD - Genomes	NC_000006.12 - 3442666	Apr 26, 2021 (155)
141	Genome of the Netherlands Release 5	NC_000006.11 - 3442900	Apr 26, 2020 (154)
142	HGDP-CEPH-db Supplement 1	NC_000006.10 - 3387899	Apr 26, 2020 (154)
143	HapMap	NC_000006.12 - 3442666	Apr 26, 2020 (154)
144	KOREAN population from KRGDB	NC_000006.11 - 3442900	Apr 26, 2020 (154)
145	Northern Sweden	NC_000006.11 - 3442900	Jul 13, 2019 (153)
146	The PAGE Study	NC_000006.12 - 3442666	Jul 13, 2019 (153)
147	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000006.11 - 3442900	Apr 26, 2021 (155)
148	CNV burdens in cranial meningiomas	NC_000006.11 - 3442900	Apr 26, 2021 (155)
149	Qatari	NC_000006.11 - 3442900	Apr 26, 2020 (154)
150	SGDP_PRJ	NC_000006.11 - 3442900	Apr 26, 2020 (154)
151	Siberian	NC_000006.11 - 3442900	Apr 26, 2020 (154)
152	8.3KJPN	NC_000006.11 - 3442900	Apr 26, 2021 (155)
153	14KJPN	NC_000006.12 - 3442666	Oct 13, 2022 (156)
154	TopMed	NC_000006.12 - 3442666	Apr 26, 2021 (155)
155	UK 10K study - Twins	NC_000006.11 - 3442900	Oct 12, 2018 (152)
156	A Vietnamese Genetic Variation Database	NC_000006.11 - 3442900	Jul 13, 2019 (153)
157	ALFA	NC_000006.12 - 3442666	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs60975733	May 26, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
17703452, ss3910526058	NC_000006.11:3442899:T:A	NC_000006.12:3442665:T:A	(self)
ss3639304182, ss3639948612, ss3643993757	NC_000006.9:3387898:T:C	NC_000006.12:3442665:T:C	(self)
498254, ss109703278, ss113811468, ss160825556, ss161970082, ss163068951, ss166038622, ss201339475, ss253993334, ss278628460, ss285327957, ss293586042, ss481400608, ss1592066092, ss1712830334, ss3643545434, ss3847820362	NC_000006.10:3387898:T:C	NC_000006.12:3442665:T:C	(self)
30467118, 16957890, 12080369, 7671052, 7526940, 17703452, 6433882, 421085, 109829, 7819957, 15809172, 4181834, 33862219, 16957890, 3755835, ss222173574, ss233298116, ss240389205, ss481427200, ss482406443, ss485495260, ss537410470, ss558961726, ss652872932, ss778956767, ss783193169, ss784148275, ss832453016, ss833078746, ss833669574, ss834418665, ss982520228, ss1073332907, ss1318734045, ss1430617688, ss1581506113, ss1614819811, ss1657813844, ss1752633450, ss1925778027, ss1946165951, ss1958857405, ss1970295383, ss2023503533, ss2151665480, ss2626240195, ss2634391159, ss2707250621, ss2711058206, ss2835131364, ss2998418505, ss3022568900, ss3346806686, ss3625892575, ss3629429258, ss3632311767, ss3633403681, ss3634125580, ss3635041328, ss3635806970, ss3636755740, ss3637559683, ss3638603293, ss3640748623, ss3644899011, ss3653076644, ss3666342121, ss3733149017, ss3744265454, ss3745341451, ss3764537180, ss3772835278, ss3785354992, ss3790723007, ss3795600166, ss3829699084, ss3838323889, ss3863792192, ss3910526058, ss3984560454, ss3985195158, ss4017251680, ss5175892912, ss5315116739, ss5363427989, ss5508329308, ss5624612895, ss5639646224, ss5799673963, ss5841709630, ss5847282591, ss5848078709, ss5968139269, ss5979767968	NC_000006.11:3442899:T:C	NC_000006.12:3442665:T:C	(self)
40043160, 215427138, 3046691, 479667, 47319768, 529075969, 13717212306, ss2281303076, ss3025535139, ss3648254587, ss3716463067, ss3726305153, ss3771258198, ss3807698393, ss3843763720, ss4691698411, ss5267190151, ss5465003410, ss5552517225, ss5713482664, ss5807098848, ss5855175837, ss5882412027	NC_000006.12:3442665:T:C	NC_000006.12:3442665:T:C	(self)
ss23410429, ss44736668, ss67516678, ss67882137, ss68263780, ss70895749, ss71489909, ss74960646, ss84576034, ss98468483, ss104273196, ss142506225, ss154392032, ss156458343, ss159567627, ss174168226	NT_007592.15:3382899:T:C	NC_000006.12:3442665:T:C	(self)
ss10311024, ss13153302	NT_034880.2:3382898:T:C	NC_000006.12:3442665:T:C	(self)
ss20262649, ss22379463	NT_034880.3:3382898:T:C	NC_000006.12:3442665:T:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs6921583

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs6921583