Name: rs649098
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs649098

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr11:105861439 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>C
Variation Type: SNV Single Nucleotide Variation
Frequency: G=0.425267 (112564/264690, TOPMED)
G=0.421796 (59000/139878, GnomAD)
C=0.31775 (8979/28258, 14KJPN) (+ 18 more)
G=0.45183 (8535/18890, ALFA)
C=0.31943 (5353/16758, 8.3KJPN)
G=0.4449 (2849/6404, 1000G_30x)
G=0.4531 (2269/5008, 1000G)
G=0.4897 (2194/4480, Estonian)
G=0.4927 (1899/3854, ALSPAC)
G=0.4814 (1785/3708, TWINSUK)
C=0.3430 (1005/2930, KOREAN)
G=0.4531 (841/1856, HapMap)
C=0.3543 (649/1832, Korea1K)
C=0.4427 (502/1134, Daghestan)
G=0.480 (479/998, GoNL)
G=0.472 (283/600, NorthernSweden)
G=0.313 (129/412, SGDP_PRJ)
G=0.481 (104/216, Qatari)
C=0.405 (85/210, Vietnamese)
G=0.33 (16/48, Siberian)
C=0.45 (18/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: GRIA4 : Intron Variant
Publications: 1 citation
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	18890	G=0.45183	C=0.54817
European	Sub	14286	G=0.49188	C=0.50812
African	Sub	2946	G=0.2590	C=0.7410
African Others	Sub	114	G=0.281	C=0.719
African American	Sub	2832	G=0.2581	C=0.7419
Asian	Sub	112	G=0.536	C=0.464
East Asian	Sub	86	G=0.56	C=0.44
Other Asian	Sub	26	G=0.46	C=0.54
Latin American 1	Sub	146	G=0.500	C=0.500
Latin American 2	Sub	610	G=0.418	C=0.582
South Asian	Sub	98	G=0.67	C=0.33
Other	Sub	692	G=0.421	C=0.579

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.425267	C=0.574733
gnomAD - Genomes	Global	Study-wide	139878	G=0.421796	C=0.578204
gnomAD - Genomes	European	Sub	75754	G=0.49197	C=0.50803
gnomAD - Genomes	African	Sub	41914	G=0.26531	C=0.73469
gnomAD - Genomes	American	Sub	13616	G=0.43361	C=0.56639
gnomAD - Genomes	Ashkenazi Jewish	Sub	3320	G=0.5467	C=0.4533
gnomAD - Genomes	East Asian	Sub	3120	G=0.6308	C=0.3692
gnomAD - Genomes	Other	Sub	2154	G=0.4290	C=0.5710
14KJPN	JAPANESE	Study-wide	28258	G=0.68225	C=0.31775
Allele Frequency Aggregator	Total	Global	18890	G=0.45183	C=0.54817
Allele Frequency Aggregator	European	Sub	14286	G=0.49188	C=0.50812
Allele Frequency Aggregator	African	Sub	2946	G=0.2590	C=0.7410
Allele Frequency Aggregator	Other	Sub	692	G=0.421	C=0.579
Allele Frequency Aggregator	Latin American 2	Sub	610	G=0.418	C=0.582
Allele Frequency Aggregator	Latin American 1	Sub	146	G=0.500	C=0.500
Allele Frequency Aggregator	Asian	Sub	112	G=0.536	C=0.464
Allele Frequency Aggregator	South Asian	Sub	98	G=0.67	C=0.33
8.3KJPN	JAPANESE	Study-wide	16758	G=0.68057	C=0.31943
1000Genomes_30x	Global	Study-wide	6404	G=0.4449	C=0.5551
1000Genomes_30x	African	Sub	1786	G=0.2352	C=0.7648
1000Genomes_30x	Europe	Sub	1266	G=0.4755	C=0.5245
1000Genomes_30x	South Asian	Sub	1202	G=0.5424	C=0.4576
1000Genomes_30x	East Asian	Sub	1170	G=0.6513	C=0.3487
1000Genomes_30x	American	Sub	980	G=0.421	C=0.579
1000Genomes	Global	Study-wide	5008	G=0.4531	C=0.5469
1000Genomes	African	Sub	1322	G=0.2345	C=0.7655
1000Genomes	East Asian	Sub	1008	G=0.6528	C=0.3472
1000Genomes	Europe	Sub	1006	G=0.4801	C=0.5199
1000Genomes	South Asian	Sub	978	G=0.536	C=0.464
1000Genomes	American	Sub	694	G=0.424	C=0.576
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.4897	C=0.5103
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.4927	C=0.5073
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.4814	C=0.5186
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.6570	C=0.3430
HapMap	Global	Study-wide	1856	G=0.4531	C=0.5469
HapMap	American	Sub	760	G=0.475	C=0.525
HapMap	African	Sub	674	G=0.316	C=0.684
HapMap	Asian	Sub	246	G=0.687	C=0.313
HapMap	Europe	Sub	176	G=0.557	C=0.443
Korean Genome Project	KOREAN	Study-wide	1832	G=0.6457	C=0.3543
Genome-wide autozygosity in Daghestan	Global	Study-wide	1134	G=0.5573	C=0.4427
Genome-wide autozygosity in Daghestan	Daghestan	Sub	626	G=0.558	C=0.442
Genome-wide autozygosity in Daghestan	Near_East	Sub	144	G=0.535	C=0.465
Genome-wide autozygosity in Daghestan	Central Asia	Sub	122	G=0.648	C=0.352
Genome-wide autozygosity in Daghestan	Europe	Sub	108	G=0.472	C=0.528
Genome-wide autozygosity in Daghestan	South Asian	Sub	98	G=0.56	C=0.44
Genome-wide autozygosity in Daghestan	Caucasus	Sub	36	G=0.58	C=0.42
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.480	C=0.520
Northern Sweden	ACPOP	Study-wide	600	G=0.472	C=0.528
SGDP_PRJ	Global	Study-wide	412	G=0.313	C=0.687
Qatari	Global	Study-wide	216	G=0.481	C=0.519
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.595	C=0.405
Siberian	Global	Study-wide	48	G=0.33	C=0.67
The Danish reference pan genome	Danish	Study-wide	40	G=0.55	C=0.45

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 11	NC_000011.10:g.105861439G>C
GRCh37.p13 chr 11	NC_000011.9:g.105732165G>C

Gene: GRIA4, glutamate ionotropic receptor AMPA type subunit 4 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
GRIA4 transcript variant 1	NM_000829.4:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant 2	NM_001077243.3:c.488-585G… NM_001077243.3:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant 3	NM_001077244.2:c.488-585G… NM_001077244.2:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant 4	NM_001112812.2:c.488-585G… NM_001112812.2:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant 5	NR_046356.2:n.	N/A	Intron Variant
GRIA4 transcript variant X2	XM_005271518.4:c.488-585G… XM_005271518.4:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X1	XM_006718823.3:c.488-585G… XM_006718823.3:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X6	XM_011542777.4:c.-23-585G… XM_011542777.4:c.-23-585G>C	N/A	Intron Variant
GRIA4 transcript variant X4	XM_017017609.2:c.488-585G… XM_017017609.2:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X5	XM_017017610.3:c.488-585G… XM_017017610.3:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X7	XM_017017611.3:c.-23-585G… XM_017017611.3:c.-23-585G>C	N/A	Intron Variant
GRIA4 transcript variant X8	XM_024448454.2:c.488-585G… XM_024448454.2:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X9	XM_024448455.2:c.488-585G… XM_024448455.2:c.488-585G>C	N/A	Intron Variant
GRIA4 transcript variant X3	XM_047426831.1:c.488-585G… XM_047426831.1:c.488-585G>C	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	C
GRCh38.p14 chr 11	NC_000011.10:g.105861439=	NC_000011.10:g.105861439G>C
GRCh37.p13 chr 11	NC_000011.9:g.105732165=	NC_000011.9:g.105732165G>C
GRIA4 transcript variant 1	NM_000829.3:c.488-585=	NM_000829.3:c.488-585G>C
GRIA4 transcript variant 1	NM_000829.4:c.488-585=	NM_000829.4:c.488-585G>C
GRIA4 transcript variant 2	NM_001077243.2:c.488-585=	NM_001077243.2:c.488-585G>C
GRIA4 transcript variant 2	NM_001077243.3:c.488-585=	NM_001077243.3:c.488-585G>C
GRIA4 transcript variant 3	NM_001077244.1:c.488-585=	NM_001077244.1:c.488-585G>C
GRIA4 transcript variant 3	NM_001077244.2:c.488-585=	NM_001077244.2:c.488-585G>C
GRIA4 transcript variant 4	NM_001112812.1:c.488-585=	NM_001112812.1:c.488-585G>C
GRIA4 transcript variant 4	NM_001112812.2:c.488-585=	NM_001112812.2:c.488-585G>C
GRIA4 transcript variant X1	XM_005271518.1:c.488-585=	XM_005271518.1:c.488-585G>C
GRIA4 transcript variant X2	XM_005271518.4:c.488-585=	XM_005271518.4:c.488-585G>C
GRIA4 transcript variant X1	XM_006718823.3:c.488-585=	XM_006718823.3:c.488-585G>C
GRIA4 transcript variant X6	XM_011542777.4:c.-23-585=	XM_011542777.4:c.-23-585G>C
GRIA4 transcript variant X4	XM_017017609.2:c.488-585=	XM_017017609.2:c.488-585G>C
GRIA4 transcript variant X5	XM_017017610.3:c.488-585=	XM_017017610.3:c.488-585G>C
GRIA4 transcript variant X7	XM_017017611.3:c.-23-585=	XM_017017611.3:c.-23-585G>C
GRIA4 transcript variant X8	XM_024448454.2:c.488-585=	XM_024448454.2:c.488-585G>C
GRIA4 transcript variant X9	XM_024448455.2:c.488-585=	XM_024448455.2:c.488-585G>C
GRIA4 transcript variant X3	XM_047426831.1:c.488-585=	XM_047426831.1:c.488-585G>C

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

77 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_JCM	ss822022	Aug 11, 2000 (83)
2	KWOK	ss1926149	Oct 18, 2000 (87)
3	TSC-CSHL	ss3170968	Jun 15, 2001 (123)
4	SC_SNP	ss16180193	Feb 27, 2004 (120)
5	ABI	ss38705622	Mar 15, 2006 (126)
6	ILLUMINA	ss65757110	Oct 14, 2006 (127)
7	PERLEGEN	ss69327750	May 16, 2007 (127)
8	AFFY	ss76478867	Dec 06, 2007 (129)
9	BCMHGSC_JDW	ss88769904	Mar 24, 2008 (129)
10	KRIBB_YJKIM	ss104823022	Feb 06, 2009 (130)
11	BGI	ss106768272	Feb 06, 2009 (130)
12	1000GENOMES	ss111019330	Jan 25, 2009 (130)
13	1000GENOMES	ss115120201	Jan 25, 2009 (130)
14	ILLUMINA-UK	ss119952583	Dec 01, 2009 (131)
15	ENSEMBL	ss132804505	Dec 01, 2009 (131)
16	GMI	ss156751429	Dec 01, 2009 (131)
17	COMPLETE_GENOMICS	ss170820171	Jul 04, 2010 (132)
18	COMPLETE_GENOMICS	ss175267347	Jul 04, 2010 (132)
19	BUSHMAN	ss203166598	Jul 04, 2010 (132)
20	1000GENOMES	ss225442698	Jul 14, 2010 (132)
21	1000GENOMES	ss235705465	Jul 15, 2010 (132)
22	1000GENOMES	ss242306336	Jul 15, 2010 (132)
23	BL	ss255369207	May 09, 2011 (134)
24	GMI	ss281158120	May 04, 2012 (137)
25	GMI	ss286451090	Apr 25, 2013 (138)
26	TISHKOFF	ss562803034	Apr 25, 2013 (138)
27	SSMP	ss658325820	Apr 25, 2013 (138)
28	EVA-GONL	ss988924009	Aug 21, 2014 (142)
29	JMKIDD_LAB	ss1078017341	Aug 21, 2014 (142)
30	1000GENOMES	ss1342814422	Aug 21, 2014 (142)
31	HAMMER_LAB	ss1397616198	Sep 08, 2015 (146)
32	DDI	ss1426750548	Apr 01, 2015 (144)
33	EVA_GENOME_DK	ss1575931730	Apr 01, 2015 (144)
34	EVA_DECODE	ss1598588447	Apr 01, 2015 (144)
35	EVA_UK10K_ALSPAC	ss1627380220	Apr 01, 2015 (144)
36	EVA_UK10K_TWINSUK	ss1670374253	Apr 01, 2015 (144)
37	EVA_SVP	ss1713282053	Apr 01, 2015 (144)
38	HAMMER_LAB	ss1806980515	Sep 08, 2015 (146)
39	WEILL_CORNELL_DGM	ss1932286398	Feb 12, 2016 (147)
40	GENOMED	ss1967450146	Jul 19, 2016 (147)
41	JJLAB	ss2026887833	Sep 14, 2016 (149)
42	USC_VALOUEV	ss2155200014	Dec 20, 2016 (150)
43	HUMAN_LONGEVITY	ss2185386484	Dec 20, 2016 (150)
44	SYSTEMSBIOZJU	ss2627917914	Nov 08, 2017 (151)
45	GRF	ss2699506683	Nov 08, 2017 (151)
46	GNOMAD	ss2904027813	Nov 08, 2017 (151)
47	AFFY	ss2985597950	Nov 08, 2017 (151)
48	SWEGEN	ss3008720617	Nov 08, 2017 (151)
49	BIOINF_KMB_FNS_UNIBA	ss3027243840	Nov 08, 2017 (151)
50	CSHL	ss3349778713	Nov 08, 2017 (151)
51	EGCUT_WGS	ss3676043607	Jul 13, 2019 (153)
52	EVA_DECODE	ss3692527302	Jul 13, 2019 (153)
53	ACPOP	ss3738510041	Jul 13, 2019 (153)
54	EVA	ss3749765854	Jul 13, 2019 (153)
55	PACBIO	ss3787057922	Jul 13, 2019 (153)
56	PACBIO	ss3792183913	Jul 13, 2019 (153)
57	PACBIO	ss3797066437	Jul 13, 2019 (153)
58	KHV_HUMAN_GENOMES	ss3815098856	Jul 13, 2019 (153)
59	EVA	ss3832821454	Apr 26, 2020 (154)
60	EVA	ss3839972818	Apr 26, 2020 (154)
61	EVA	ss3845454183	Apr 26, 2020 (154)
62	SGDP_PRJ	ss3877063180	Apr 26, 2020 (154)
63	KRGDB	ss3925507580	Apr 26, 2020 (154)
64	KOGIC	ss3970674450	Apr 26, 2020 (154)
65	TOPMED	ss4898630831	Apr 26, 2021 (155)
66	TOMMO_GENOMICS	ss5203722082	Apr 26, 2021 (155)
67	1000G_HIGH_COVERAGE	ss5288771873	Oct 16, 2022 (156)
68	EVA	ss5402002240	Oct 16, 2022 (156)
69	HUGCELL_USP	ss5483772785	Oct 16, 2022 (156)
70	1000G_HIGH_COVERAGE	ss5585189199	Oct 16, 2022 (156)
71	SANFORD_IMAGENETICS	ss5651999489	Oct 16, 2022 (156)
72	TOMMO_GENOMICS	ss5752120440	Oct 16, 2022 (156)
73	YY_MCH	ss5812747117	Oct 16, 2022 (156)
74	EVA	ss5837177863	Oct 16, 2022 (156)
75	EVA	ss5850136305	Oct 16, 2022 (156)
76	EVA	ss5921504270	Oct 16, 2022 (156)
77	EVA	ss5943323675	Oct 16, 2022 (156)
78	1000Genomes	NC_000011.9 - 105732165	Oct 12, 2018 (152)
79	1000Genomes_30x	NC_000011.10 - 105861439	Oct 16, 2022 (156)
80	The Avon Longitudinal Study of Parents and Children	NC_000011.9 - 105732165	Oct 12, 2018 (152)
81	Genome-wide autozygosity in Daghestan	NC_000011.8 - 105237375	Apr 26, 2020 (154)
82	Genetic variation in the Estonian population	NC_000011.9 - 105732165	Oct 12, 2018 (152)
83	The Danish reference pan genome	NC_000011.9 - 105732165	Apr 26, 2020 (154)
84	gnomAD - Genomes	NC_000011.10 - 105861439	Apr 26, 2021 (155)
85	Genome of the Netherlands Release 5	NC_000011.9 - 105732165	Apr 26, 2020 (154)
86	HapMap	NC_000011.10 - 105861439	Apr 26, 2020 (154)
87	KOREAN population from KRGDB	NC_000011.9 - 105732165	Apr 26, 2020 (154)
88	Korean Genome Project	NC_000011.10 - 105861439	Apr 26, 2020 (154)
89	Northern Sweden	NC_000011.9 - 105732165	Jul 13, 2019 (153)
90	Qatari	NC_000011.9 - 105732165	Apr 26, 2020 (154)
91	SGDP_PRJ	NC_000011.9 - 105732165	Apr 26, 2020 (154)
92	Siberian	NC_000011.9 - 105732165	Apr 26, 2020 (154)
93	8.3KJPN	NC_000011.9 - 105732165	Apr 26, 2021 (155)
94	14KJPN	NC_000011.10 - 105861439	Oct 16, 2022 (156)
95	TopMed	NC_000011.10 - 105861439	Apr 26, 2021 (155)
96	UK 10K study - Twins	NC_000011.9 - 105732165	Oct 12, 2018 (152)
97	A Vietnamese Genetic Variation Database	NC_000011.9 - 105732165	Jul 13, 2019 (153)
98	ALFA	NC_000011.10 - 105861439	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs2226579	Sep 24, 2004 (123)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
87307, ss76478867, ss88769904, ss111019330, ss115120201, ss119952583, ss170820171, ss175267347, ss203166598, ss255369207, ss281158120, ss286451090, ss1397616198, ss1598588447, ss1713282053	NC_000011.8:105237374:G:C	NC_000011.10:105861438:G:C	(self)
55391035, 30741400, 21781855, 2721416, 13721788, 32684974, 11794906, 14328328, 29080160, 7716368, 61691389, 30741400, 6824364, ss225442698, ss235705465, ss242306336, ss562803034, ss658325820, ss988924009, ss1078017341, ss1342814422, ss1426750548, ss1575931730, ss1627380220, ss1670374253, ss1806980515, ss1932286398, ss1967450146, ss2026887833, ss2155200014, ss2627917914, ss2699506683, ss2904027813, ss2985597950, ss3008720617, ss3349778713, ss3676043607, ss3738510041, ss3749765854, ss3787057922, ss3792183913, ss3797066437, ss3832821454, ss3839972818, ss3877063180, ss3925507580, ss5203722082, ss5402002240, ss5651999489, ss5837177863, ss5943323675	NC_000011.9:105732164:G:C	NC_000011.10:105861438:G:C	(self)
72715134, 390861805, 690751, 27052451, 85957544, 114176487, 8179068685, ss2185386484, ss3027243840, ss3692527302, ss3815098856, ss3845454183, ss3970674450, ss4898630831, ss5288771873, ss5483772785, ss5585189199, ss5752120440, ss5812747117, ss5850136305, ss5921504270	NC_000011.10:105861438:G:C	NC_000011.10:105861438:G:C	(self)
ss16180193	NT_033899.6:9276016:G:C	NC_000011.10:105861438:G:C	(self)
ss822022, ss1926149, ss3170968, ss38705622, ss65757110, ss69327750, ss104823022, ss106768272, ss132804505, ss156751429	NT_033899.8:9294580:G:C	NC_000011.10:105861438:G:C	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs649098

PMID	Title	Author	Year	Journal
20579352	Common variants in the regulative regions of GRIA1 and GRIA3 receptor genes are associated with migraine susceptibility.	Formicola D et al.	2010	BMC medical genetics

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs649098