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Reference SNP (refSNP) Cluster Report: rs61720637                 
RefSNP
Organism:human (Homo sapiens)
Molecule Type:Genomic
Created/Updated in build:129/142
Map to Genome Build:106/Weight
Validation Status:
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:C/G (FWD)
Allele Origin:
Ancestral Allele:Not available
Variation Viewer:unknown
Clinical Significance:NA
MAF/MinorAlleleCount:NA
MAF Source:
HGVS Names
  • NC_000007.13:g.1041719C>G
  • NC_000007.14:g.1002083C>G
  • NM_001134395.1:c.324-1532G>C
  • NM_001134396.1:c.324-1532G>C
  • NM_032350.5:c.324-1532G>C
  • XM_005249886.1:c.867-1532G>C
  • XM_005249887.1:c.324-1532G>C
  • XM_005249888.1:c.324-1532G>C
  • XM_005249888.2:c.324-1532G>C
  • XM_005249889.1:c.282-1532G>C
  • XM_005249889.2:c.282-1532G>C
  • XM_006715793.1:c.867-1532G>C
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' to see variant in the new NCBI variation viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss85446152 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs61720637 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss85446152HGSV|Cor18517_SNV_20070510.chr7_814960fwd/C/Ggggtggggagtcctgtgggtggggagtccttgggtgagtggagtcctgtgggtgggaagt12/06/0712/09/07129Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs61720637|allelePos=201|totalLen=401|taxid=9606|snpclass=1|alleles='C/G'|mol=Genomic|build=129
 GGGTGAGTGG AGTCCTGTGG GTGGGGAGTC CTGCGGGTGG GGAGTCCTGC GGGTGGGGAG
 TCCTGTGGGT GAGTGGAGTC CTGTGGGTGA GTGGAGTCCT GTGGGTGGGG AGTCCTGTGG
 GTGAGTGGAG TCCTGTGGGT GGGGAGTCCT GTGGGTTAGT GGAGTCCTGC GGGTGGGGAG
 TCCTGTGGGT GGGGAGTCCT
 S
 TGGGTGAGTG GAGTCCTGTG GGTGGGAAGT CCTGTGGGTG AGTGGAGCCC TGTGGGTGAG
 TGGAGTCCTG TGGGTGAGTG GAGTCCTGCA GGTGGGGAGT CCTGTGGGTG GGGAGTCCTG
 TGGGTGAGTG GAGTCCTGCG GGTGAGTGGA GTCCTGCGGG TGAGTGGAGT CCTGTGGGTG
 AGTGGAGCCC TGTGGGTGAG

  NCBI Resource Links back to top
Submitter-Referenced
dbSNP Blast Analysis

  Population Diversity (in rs orientation) back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
UNKNOWNUNKNOWNUNKNOWN

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