Name: rs537571789
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs537571789

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:41700212-41700219 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: dupT
Variation Type: Indel Insertion and Deletion
Frequency: dupT=0.006910 (1829/264690, TOPMED)
dupT=0.006799 (948/139440, GnomAD)
dupT=0.00367 (60/16332, ALFA) (+ 3 more)
dupT=0.0070 (45/6404, 1000G_30x)
dupT=0.0068 (34/5008, 1000G)
dupT=0.0004 (2/4480, Estonian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: MGA : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	16332	TTTTTTTT=0.99633	TTTTTTTTT=0.00367
European	Sub	12080	TTTTTTTT=0.99983	TTTTTTTTT=0.00017
African	Sub	2816	TTTTTTTT=0.9812	TTTTTTTTT=0.0188
African Others	Sub	108	TTTTTTTT=0.981	TTTTTTTTT=0.019
African American	Sub	2708	TTTTTTTT=0.9812	TTTTTTTTT=0.0188
Asian	Sub	108	TTTTTTTT=1.000	TTTTTTTTT=0.000
East Asian	Sub	84	TTTTTTTT=1.00	TTTTTTTTT=0.00
Other Asian	Sub	24	TTTTTTTT=1.00	TTTTTTTTT=0.00
Latin American 1	Sub	146	TTTTTTTT=0.993	TTTTTTTTT=0.007
Latin American 2	Sub	610	TTTTTTTT=1.000	TTTTTTTTT=0.000
South Asian	Sub	94	TTTTTTTT=1.00	TTTTTTTTT=0.00
Other	Sub	478	TTTTTTTT=0.992	TTTTTTTTT=0.008

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	- No frequency provided	dupT=0.006910
gnomAD - Genomes	Global	Study-wide	139440	- No frequency provided	dupT=0.006799
gnomAD - Genomes	European	Sub	75572	- No frequency provided	dupT=0.00003
gnomAD - Genomes	African	Sub	41728	- No frequency provided	dupT=0.02195
gnomAD - Genomes	American	Sub	13570	- No frequency provided	dupT=0.00147
gnomAD - Genomes	Ashkenazi Jewish	Sub	3308	- No frequency provided	dupT=0.0000
gnomAD - Genomes	East Asian	Sub	3120	- No frequency provided	dupT=0.0006
gnomAD - Genomes	Other	Sub	2142	- No frequency provided	dupT=0.0037
Allele Frequency Aggregator	Total	Global	16332	(T)₈=0.99633	dupT=0.00367
Allele Frequency Aggregator	European	Sub	12080	(T)₈=0.99983	dupT=0.00017
Allele Frequency Aggregator	African	Sub	2816	(T)₈=0.9812	dupT=0.0188
Allele Frequency Aggregator	Latin American 2	Sub	610	(T)₈=1.000	dupT=0.000
Allele Frequency Aggregator	Other	Sub	478	(T)₈=0.992	dupT=0.008
Allele Frequency Aggregator	Latin American 1	Sub	146	(T)₈=0.993	dupT=0.007
Allele Frequency Aggregator	Asian	Sub	108	(T)₈=1.000	dupT=0.000
Allele Frequency Aggregator	South Asian	Sub	94	(T)₈=1.00	dupT=0.00
1000Genomes_30x	Global	Study-wide	6404	- No frequency provided	dupT=0.0070
1000Genomes_30x	African	Sub	1786	- No frequency provided	dupT=0.0246
1000Genomes_30x	Europe	Sub	1266	- No frequency provided	dupT=0.0000
1000Genomes_30x	South Asian	Sub	1202	- No frequency provided	dupT=0.0000
1000Genomes_30x	East Asian	Sub	1170	- No frequency provided	dupT=0.0000
1000Genomes_30x	American	Sub	980	- No frequency provided	dupT=0.001
1000Genomes	Global	Study-wide	5008	- No frequency provided	dupT=0.0068
1000Genomes	African	Sub	1322	- No frequency provided	dupT=0.0250
1000Genomes	East Asian	Sub	1008	- No frequency provided	dupT=0.0000
1000Genomes	Europe	Sub	1006	- No frequency provided	dupT=0.0000
1000Genomes	South Asian	Sub	978	- No frequency provided	dupT=0.000
1000Genomes	American	Sub	694	- No frequency provided	dupT=0.001
Genetic variation in the Estonian population	Estonian	Study-wide	4480	- No frequency provided	dupT=0.0004

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.41700219dup
GRCh37.p13 chr 15	NC_000015.9:g.41992417dup

Gene: MGA, MAX dimerization protein MGA (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
MGA transcript variant 2	NM_001080541.3:c.2188+106… NM_001080541.3:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant 1	NM_001164273.2:c.2188+106… NM_001164273.2:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant 3	NM_001400225.1:c.2188+106… NM_001400225.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant 4	NM_001400242.1:c.2188+106… NM_001400242.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant 5	NM_001400243.1:c.	N/A	Genic Downstream Transcript Variant
MGA transcript variant 6	NM_001400244.1:c.	N/A	Genic Downstream Transcript Variant
MGA transcript variant 7	NM_001400245.1:c.	N/A	Genic Downstream Transcript Variant
MGA transcript variant 8	NM_001400246.1:c.	N/A	Genic Downstream Transcript Variant
MGA transcript variant 9	NM_001400247.1:c.	N/A	Genic Downstream Transcript Variant
MGA transcript variant X1	XM_005254243.4:c.2188+106… XM_005254243.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X2	XM_005254246.4:c.2188+106… XM_005254246.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X6	XM_005254249.4:c.2188+106… XM_005254249.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X13	XM_005254252.4:c.2188+106… XM_005254252.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X16	XM_005254253.4:c.2188+106… XM_005254253.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X3	XM_006720443.5:c.2188+106… XM_006720443.5:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X30	XM_006720445.5:c.817+1060… XM_006720445.5:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X9	XM_011521397.4:c.2188+106… XM_011521397.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X10	XM_011521398.4:c.2188+106… XM_011521398.4:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X29	XM_017022029.3:c.817+1060… XM_017022029.3:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X4	XM_047432276.1:c.2188+106… XM_047432276.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X5	XM_047432278.1:c.2188+106… XM_047432278.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X7	XM_047432279.1:c.2188+106… XM_047432279.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X8	XM_047432280.1:c.2188+106… XM_047432280.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X11	XM_047432281.1:c.2188+106… XM_047432281.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X12	XM_047432282.1:c.2188+106… XM_047432282.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X14	XM_047432283.1:c.2188+106… XM_047432283.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X15	XM_047432285.1:c.2188+106… XM_047432285.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X17	XM_047432286.1:c.2188+106… XM_047432286.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X18	XM_047432287.1:c.2188+106… XM_047432287.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X19	XM_047432288.1:c.2188+106… XM_047432288.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X20	XM_047432289.1:c.2188+106… XM_047432289.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X21	XM_047432290.1:c.2188+106… XM_047432290.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X22	XM_047432291.1:c.2188+106… XM_047432291.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X23	XM_047432292.1:c.2188+106… XM_047432292.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X24	XM_047432293.1:c.2188+106… XM_047432293.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X25	XM_047432295.1:c.2188+106… XM_047432295.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X26	XM_047432296.1:c.2188+106… XM_047432296.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X27	XM_047432297.1:c.2188+106… XM_047432297.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X28	XM_047432298.1:c.2188+106… XM_047432298.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X31	XM_047432299.1:c.817+1060… XM_047432299.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X32	XM_047432300.1:c.817+1060… XM_047432300.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X33	XM_047432301.1:c.817+1060… XM_047432301.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X34	XM_047432302.1:c.817+1060… XM_047432302.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X35	XM_047432303.1:c.817+1060… XM_047432303.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X36	XM_047432304.1:c.817+1060… XM_047432304.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X37	XM_047432305.1:c.817+1060… XM_047432305.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X38	XM_047432306.1:c.817+1060… XM_047432306.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X39	XM_047432307.1:c.817+1060… XM_047432307.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X40	XM_047432308.1:c.817+1060… XM_047432308.1:c.817+1060dup	N/A	Intron Variant
MGA transcript variant X43	XM_047432309.1:c.2188+106… XM_047432309.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X44	XM_047432310.1:c.2188+106… XM_047432310.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X45	XM_047432311.1:c.2188+106… XM_047432311.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X46	XM_047432312.1:c.2188+106… XM_047432312.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X47	XM_047432313.1:c.2188+106… XM_047432313.1:c.2188+1060dup	N/A	Intron Variant
MGA transcript variant X41	XM_005254254.5:c.	N/A	Genic Upstream Transcript Variant
MGA transcript variant X42	XM_011521399.4:c.	N/A	Genic Upstream Transcript Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(T)₈=	dupT
GRCh38.p14 chr 15	NC_000015.10:g.41700212_41700219=	NC_000015.10:g.41700219dup
GRCh37.p13 chr 15	NC_000015.9:g.41992410_41992417=	NC_000015.9:g.41992417dup
MGA transcript variant 2	NM_001080541.2:c.2188+1053=	NM_001080541.2:c.2188+1060dup
MGA transcript variant 2	NM_001080541.3:c.2188+1053=	NM_001080541.3:c.2188+1060dup
MGA transcript variant 1	NM_001164273.1:c.2188+1053=	NM_001164273.1:c.2188+1060dup
MGA transcript variant 1	NM_001164273.2:c.2188+1053=	NM_001164273.2:c.2188+1060dup
MGA transcript variant 3	NM_001400225.1:c.2188+1053=	NM_001400225.1:c.2188+1060dup
MGA transcript variant 4	NM_001400242.1:c.2188+1053=	NM_001400242.1:c.2188+1060dup
MGA transcript variant X1	XM_005254243.1:c.2188+1053=	XM_005254243.1:c.2188+1060dup
MGA transcript variant X1	XM_005254243.4:c.2188+1053=	XM_005254243.4:c.2188+1060dup
MGA transcript variant X2	XM_005254244.1:c.2188+1053=	XM_005254244.1:c.2188+1060dup
MGA transcript variant X3	XM_005254245.1:c.2188+1053=	XM_005254245.1:c.2188+1060dup
MGA transcript variant X2	XM_005254246.1:c.2188+1053=	XM_005254246.1:c.2188+1060dup
MGA transcript variant X2	XM_005254246.4:c.2188+1053=	XM_005254246.4:c.2188+1060dup
MGA transcript variant X6	XM_005254247.1:c.2188+1053=	XM_005254247.1:c.2188+1060dup
MGA transcript variant X7	XM_005254248.1:c.2188+1053=	XM_005254248.1:c.2188+1060dup
MGA transcript variant X8	XM_005254249.1:c.2188+1053=	XM_005254249.1:c.2188+1060dup
MGA transcript variant X6	XM_005254249.4:c.2188+1053=	XM_005254249.4:c.2188+1060dup
MGA transcript variant X8	XM_005254250.1:c.2188+1053=	XM_005254250.1:c.2188+1060dup
MGA transcript variant X9	XM_005254251.1:c.2188+1053=	XM_005254251.1:c.2188+1060dup
MGA transcript variant X11	XM_005254252.1:c.2188+1053=	XM_005254252.1:c.2188+1060dup
MGA transcript variant X13	XM_005254252.4:c.2188+1053=	XM_005254252.4:c.2188+1060dup
MGA transcript variant X12	XM_005254253.1:c.2188+1053=	XM_005254253.1:c.2188+1060dup
MGA transcript variant X16	XM_005254253.4:c.2188+1053=	XM_005254253.4:c.2188+1060dup
MGA transcript variant X3	XM_006720443.5:c.2188+1053=	XM_006720443.5:c.2188+1060dup
MGA transcript variant X30	XM_006720445.5:c.817+1053=	XM_006720445.5:c.817+1060dup
MGA transcript variant X9	XM_011521397.4:c.2188+1053=	XM_011521397.4:c.2188+1060dup
MGA transcript variant X10	XM_011521398.4:c.2188+1053=	XM_011521398.4:c.2188+1060dup
MGA transcript variant X29	XM_017022029.3:c.817+1053=	XM_017022029.3:c.817+1060dup
MGA transcript variant X4	XM_047432276.1:c.2188+1053=	XM_047432276.1:c.2188+1060dup
MGA transcript variant X5	XM_047432278.1:c.2188+1053=	XM_047432278.1:c.2188+1060dup
MGA transcript variant X7	XM_047432279.1:c.2188+1053=	XM_047432279.1:c.2188+1060dup
MGA transcript variant X8	XM_047432280.1:c.2188+1053=	XM_047432280.1:c.2188+1060dup
MGA transcript variant X11	XM_047432281.1:c.2188+1053=	XM_047432281.1:c.2188+1060dup
MGA transcript variant X12	XM_047432282.1:c.2188+1053=	XM_047432282.1:c.2188+1060dup
MGA transcript variant X14	XM_047432283.1:c.2188+1053=	XM_047432283.1:c.2188+1060dup
MGA transcript variant X15	XM_047432285.1:c.2188+1053=	XM_047432285.1:c.2188+1060dup
MGA transcript variant X17	XM_047432286.1:c.2188+1053=	XM_047432286.1:c.2188+1060dup
MGA transcript variant X18	XM_047432287.1:c.2188+1053=	XM_047432287.1:c.2188+1060dup
MGA transcript variant X19	XM_047432288.1:c.2188+1053=	XM_047432288.1:c.2188+1060dup
MGA transcript variant X20	XM_047432289.1:c.2188+1053=	XM_047432289.1:c.2188+1060dup
MGA transcript variant X21	XM_047432290.1:c.2188+1053=	XM_047432290.1:c.2188+1060dup
MGA transcript variant X22	XM_047432291.1:c.2188+1053=	XM_047432291.1:c.2188+1060dup
MGA transcript variant X23	XM_047432292.1:c.2188+1053=	XM_047432292.1:c.2188+1060dup
MGA transcript variant X24	XM_047432293.1:c.2188+1053=	XM_047432293.1:c.2188+1060dup
MGA transcript variant X25	XM_047432295.1:c.2188+1053=	XM_047432295.1:c.2188+1060dup
MGA transcript variant X26	XM_047432296.1:c.2188+1053=	XM_047432296.1:c.2188+1060dup
MGA transcript variant X27	XM_047432297.1:c.2188+1053=	XM_047432297.1:c.2188+1060dup
MGA transcript variant X28	XM_047432298.1:c.2188+1053=	XM_047432298.1:c.2188+1060dup
MGA transcript variant X31	XM_047432299.1:c.817+1053=	XM_047432299.1:c.817+1060dup
MGA transcript variant X32	XM_047432300.1:c.817+1053=	XM_047432300.1:c.817+1060dup
MGA transcript variant X33	XM_047432301.1:c.817+1053=	XM_047432301.1:c.817+1060dup
MGA transcript variant X34	XM_047432302.1:c.817+1053=	XM_047432302.1:c.817+1060dup
MGA transcript variant X35	XM_047432303.1:c.817+1053=	XM_047432303.1:c.817+1060dup
MGA transcript variant X36	XM_047432304.1:c.817+1053=	XM_047432304.1:c.817+1060dup
MGA transcript variant X37	XM_047432305.1:c.817+1053=	XM_047432305.1:c.817+1060dup
MGA transcript variant X38	XM_047432306.1:c.817+1053=	XM_047432306.1:c.817+1060dup
MGA transcript variant X39	XM_047432307.1:c.817+1053=	XM_047432307.1:c.817+1060dup
MGA transcript variant X40	XM_047432308.1:c.817+1053=	XM_047432308.1:c.817+1060dup
MGA transcript variant X43	XM_047432309.1:c.2188+1053=	XM_047432309.1:c.2188+1060dup
MGA transcript variant X44	XM_047432310.1:c.2188+1053=	XM_047432310.1:c.2188+1060dup
MGA transcript variant X45	XM_047432311.1:c.2188+1053=	XM_047432311.1:c.2188+1060dup
MGA transcript variant X46	XM_047432312.1:c.2188+1053=	XM_047432312.1:c.2188+1060dup
MGA transcript variant X47	XM_047432313.1:c.2188+1053=	XM_047432313.1:c.2188+1060dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

10 SubSNP, 6 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	1000GENOMES	ss1374817152	Aug 21, 2014 (142)
2	GNOMAD	ss2934089251	Nov 08, 2017 (151)
3	EGCUT_WGS	ss3680315287	Jul 13, 2019 (153)
4	KHV_HUMAN_GENOMES	ss3818319003	Jul 13, 2019 (153)
5	TOPMED	ss4988874492	Apr 27, 2021 (155)
6	1000G_HIGH_COVERAGE	ss5298199391	Oct 17, 2022 (156)
7	HUGCELL_USP	ss5491954917	Oct 17, 2022 (156)
8	1000G_HIGH_COVERAGE	ss5599477269	Oct 17, 2022 (156)
9	SANFORD_IMAGENETICS	ss5657373746	Oct 17, 2022 (156)
10	EVA	ss5875598957	Oct 17, 2022 (156)
11	1000Genomes	NC_000015.9 - 41992410	Oct 12, 2018 (152)
12	1000Genomes_30x	NC_000015.10 - 41700212	Oct 17, 2022 (156)
13	Genetic variation in the Estonian population	NC_000015.9 - 41992410	Oct 12, 2018 (152)
14	gnomAD - Genomes	NC_000015.10 - 41700212	Apr 27, 2021 (155)
15	TopMed	NC_000015.10 - 41700212	Apr 27, 2021 (155)
16	ALFA	NC_000015.10 - 41700212	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
66247160, 26053535, ss1374817152, ss2934089251, ss3680315287, ss5657373746	NC_000015.9:41992409::T	NC_000015.10:41700211:TTTTTTTT:TTT… NC_000015.10:41700211:TTTTTTTT:TTTTTTTTT	(self)
87003204, 466988312, 204420152, ss3818319003, ss4988874492, ss5298199391, ss5491954917, ss5599477269, ss5875598957	NC_000015.10:41700211::T	NC_000015.10:41700211:TTTTTTTT:TTT… NC_000015.10:41700211:TTTTTTTT:TTTTTTTTT	(self)
8459118131	NC_000015.10:41700211:TTTTTTTT:TTT… NC_000015.10:41700211:TTTTTTTT:TTTTTTTTT	NC_000015.10:41700211:TTTTTTTT:TTT… NC_000015.10:41700211:TTTTTTTT:TTTTTTTTT	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs537571789

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs537571789