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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs4660016

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr1:240972145 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.428516 (113424/264690, TOPMED)
A=0.28320 (8002/28256, 14KJPN)
A=0.28473 (4772/16760, 8.3KJPN) (+ 16 more)
G=0.28763 (3176/11042, ALFA)
G=0.4852 (3107/6404, 1000G_30x)
G=0.4904 (2456/5008, 1000G)
G=0.4567 (2046/4480, Estonian)
G=0.4341 (1673/3854, ALSPAC)
G=0.4544 (1685/3708, TWINSUK)
A=0.3072 (900/2930, KOREAN)
A=0.3210 (588/1832, Korea1K)
G=0.425 (424/998, GoNL)
G=0.365 (219/600, NorthernSweden)
A=0.333 (134/402, SGDP_PRJ)
G=0.488 (161/330, HapMap)
G=0.435 (94/216, Qatari)
A=0.285 (61/214, Vietnamese)
G=0.42 (17/40, GENOME_DK)
A=0.38 (13/34, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
RGS7 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 11042 A=0.71237 C=0.00000, G=0.28763
European Sub 9206 A=0.6724 C=0.0000, G=0.3276
African Sub 1186 A=0.9486 C=0.0000, G=0.0514
African Others Sub 50 A=0.96 C=0.00, G=0.04
African American Sub 1136 A=0.9481 C=0.0000, G=0.0519
Asian Sub 14 A=0.79 C=0.00, G=0.21
East Asian Sub 8 A=0.8 C=0.0, G=0.2
Other Asian Sub 6 A=0.8 C=0.0, G=0.2
Latin American 1 Sub 50 A=1.00 C=0.00, G=0.00
Latin American 2 Sub 186 A=1.000 C=0.000, G=0.000
South Asian Sub 38 A=0.95 C=0.00, G=0.05
Other Sub 362 A=0.740 C=0.000, G=0.260


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.571484 G=0.428516
14KJPN JAPANESE Study-wide 28256 A=0.28320 G=0.71680
8.3KJPN JAPANESE Study-wide 16760 A=0.28473 G=0.71527
Allele Frequency Aggregator Total Global 11042 A=0.71237 C=0.00000, G=0.28763
Allele Frequency Aggregator European Sub 9206 A=0.6724 C=0.0000, G=0.3276
Allele Frequency Aggregator African Sub 1186 A=0.9486 C=0.0000, G=0.0514
Allele Frequency Aggregator Other Sub 362 A=0.740 C=0.000, G=0.260
Allele Frequency Aggregator Latin American 2 Sub 186 A=1.000 C=0.000, G=0.000
Allele Frequency Aggregator Latin American 1 Sub 50 A=1.00 C=0.00, G=0.00
Allele Frequency Aggregator South Asian Sub 38 A=0.95 C=0.00, G=0.05
Allele Frequency Aggregator Asian Sub 14 A=0.79 C=0.00, G=0.21
1000Genomes_30x Global Study-wide 6404 A=0.5147 C=0.0002, G=0.4852
1000Genomes_30x African Sub 1786 A=0.5952 C=0.0006, G=0.4043
1000Genomes_30x Europe Sub 1266 A=0.5964 C=0.0000, G=0.4036
1000Genomes_30x South Asian Sub 1202 A=0.5191 C=0.0000, G=0.4809
1000Genomes_30x East Asian Sub 1170 A=0.3085 C=0.0000, G=0.6915
1000Genomes_30x American Sub 980 A=0.503 C=0.000, G=0.497
1000Genomes Global Study-wide 5008 A=0.5096 G=0.4904
1000Genomes African Sub 1322 A=0.5968 G=0.4032
1000Genomes East Asian Sub 1008 A=0.2996 G=0.7004
1000Genomes Europe Sub 1006 A=0.5875 G=0.4125
1000Genomes South Asian Sub 978 A=0.525 G=0.475
1000Genomes American Sub 694 A=0.514 G=0.486
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.5433 G=0.4567
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.5659 G=0.4341
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.5456 G=0.4544
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.3072 G=0.6928
Korean Genome Project KOREAN Study-wide 1832 A=0.3210 G=0.6790
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.575 G=0.425
Northern Sweden ACPOP Study-wide 600 A=0.635 G=0.365
SGDP_PRJ Global Study-wide 402 A=0.333 G=0.667
HapMap Global Study-wide 330 A=0.512 G=0.488
HapMap African Sub 120 A=0.600 G=0.400
HapMap American Sub 120 A=0.592 G=0.408
HapMap Asian Sub 90 A=0.29 G=0.71
Qatari Global Study-wide 216 A=0.565 G=0.435
A Vietnamese Genetic Variation Database Global Study-wide 214 A=0.285 G=0.715
The Danish reference pan genome Danish Study-wide 40 A=0.57 G=0.42
Siberian Global Study-wide 34 A=0.38 G=0.62
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 1 NC_000001.11:g.240972145A>C
GRCh38.p14 chr 1 NC_000001.11:g.240972145A>G
GRCh37.p13 chr 1 NC_000001.10:g.241135445A>C
GRCh37.p13 chr 1 NC_000001.10:g.241135445A>G
Gene: RGS7, regulator of G protein signaling 7 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
RGS7 transcript variant 2 NM_001282773.2:c.226+1093…

NM_001282773.2:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 3 NM_001282775.2:c.226+1093…

NM_001282775.2:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 4 NM_001282778.2:c.226+1093…

NM_001282778.2:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 5 NM_001350113.2:c.148+1093…

NM_001350113.2:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant 6 NM_001350114.2:c.148+1093…

NM_001350114.2:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant 7 NM_001350115.2:c.148+1093…

NM_001350115.2:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant 8 NM_001350116.1:c.148+1093…

NM_001350116.1:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant 9 NM_001364886.1:c.226+1093…

NM_001364886.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 10 NM_001374806.1:c.176-3543…

NM_001374806.1:c.176-35439T>G

N/A Intron Variant
RGS7 transcript variant 11 NM_001374807.1:c.176-3543…

NM_001374807.1:c.176-35439T>G

N/A Intron Variant
RGS7 transcript variant 12 NM_001374808.1:c.148+1093…

NM_001374808.1:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant 13 NM_001374809.1:c.-64+1093…

NM_001374809.1:c.-64+10934T>G

N/A Intron Variant
RGS7 transcript variant 14 NM_001374810.1:c.-64+1093…

NM_001374810.1:c.-64+10934T>G

N/A Intron Variant
RGS7 transcript variant 16 NM_001374811.1:c.226+1093…

NM_001374811.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 15 NM_001374812.1:c.226+1093…

NM_001374812.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 17 NM_001374813.1:c.-64+1093…

NM_001374813.1:c.-64+10934T>G

N/A Intron Variant
RGS7 transcript variant 18 NM_001374814.1:c.226+1093…

NM_001374814.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 19 NM_001374815.1:c.226+1093…

NM_001374815.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 20 NM_001374816.1:c.226+1093…

NM_001374816.1:c.226+10934T>G

N/A Intron Variant
RGS7 transcript variant 1 NM_002924.6:c.226+10934T>G N/A Intron Variant
RGS7 transcript variant X2 XM_017002009.2:c.148+1093…

XM_017002009.2:c.148+10934T>G

N/A Intron Variant
RGS7 transcript variant X1 XM_047426980.1:c.148+1093…

XM_047426980.1:c.148+10934T>G

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G
GRCh38.p14 chr 1 NC_000001.11:g.240972145= NC_000001.11:g.240972145A>C NC_000001.11:g.240972145A>G
GRCh37.p13 chr 1 NC_000001.10:g.241135445= NC_000001.10:g.241135445A>C NC_000001.10:g.241135445A>G
RGS7 transcript variant 2 NM_001282773.2:c.226+10934= NM_001282773.2:c.226+10934T>G NM_001282773.2:c.226+10934T>C
RGS7 transcript variant 3 NM_001282775.2:c.226+10934= NM_001282775.2:c.226+10934T>G NM_001282775.2:c.226+10934T>C
RGS7 transcript variant 4 NM_001282778.2:c.226+10934= NM_001282778.2:c.226+10934T>G NM_001282778.2:c.226+10934T>C
RGS7 transcript variant 5 NM_001350113.2:c.148+10934= NM_001350113.2:c.148+10934T>G NM_001350113.2:c.148+10934T>C
RGS7 transcript variant 6 NM_001350114.2:c.148+10934= NM_001350114.2:c.148+10934T>G NM_001350114.2:c.148+10934T>C
RGS7 transcript variant 7 NM_001350115.2:c.148+10934= NM_001350115.2:c.148+10934T>G NM_001350115.2:c.148+10934T>C
RGS7 transcript variant 8 NM_001350116.1:c.148+10934= NM_001350116.1:c.148+10934T>G NM_001350116.1:c.148+10934T>C
RGS7 transcript variant 9 NM_001364886.1:c.226+10934= NM_001364886.1:c.226+10934T>G NM_001364886.1:c.226+10934T>C
RGS7 transcript variant 10 NM_001374806.1:c.176-35439= NM_001374806.1:c.176-35439T>G NM_001374806.1:c.176-35439T>C
RGS7 transcript variant 11 NM_001374807.1:c.176-35439= NM_001374807.1:c.176-35439T>G NM_001374807.1:c.176-35439T>C
RGS7 transcript variant 12 NM_001374808.1:c.148+10934= NM_001374808.1:c.148+10934T>G NM_001374808.1:c.148+10934T>C
RGS7 transcript variant 13 NM_001374809.1:c.-64+10934= NM_001374809.1:c.-64+10934T>G NM_001374809.1:c.-64+10934T>C
RGS7 transcript variant 14 NM_001374810.1:c.-64+10934= NM_001374810.1:c.-64+10934T>G NM_001374810.1:c.-64+10934T>C
RGS7 transcript variant 16 NM_001374811.1:c.226+10934= NM_001374811.1:c.226+10934T>G NM_001374811.1:c.226+10934T>C
RGS7 transcript variant 15 NM_001374812.1:c.226+10934= NM_001374812.1:c.226+10934T>G NM_001374812.1:c.226+10934T>C
RGS7 transcript variant 17 NM_001374813.1:c.-64+10934= NM_001374813.1:c.-64+10934T>G NM_001374813.1:c.-64+10934T>C
RGS7 transcript variant 18 NM_001374814.1:c.226+10934= NM_001374814.1:c.226+10934T>G NM_001374814.1:c.226+10934T>C
RGS7 transcript variant 19 NM_001374815.1:c.226+10934= NM_001374815.1:c.226+10934T>G NM_001374815.1:c.226+10934T>C
RGS7 transcript variant 20 NM_001374816.1:c.226+10934= NM_001374816.1:c.226+10934T>G NM_001374816.1:c.226+10934T>C
RGS7 transcript NM_002924.4:c.226+10934= NM_002924.4:c.226+10934T>G NM_002924.4:c.226+10934T>C
RGS7 transcript variant 1 NM_002924.6:c.226+10934= NM_002924.6:c.226+10934T>G NM_002924.6:c.226+10934T>C
RGS7 transcript variant X1 XM_005273218.1:c.226+10934= XM_005273218.1:c.226+10934T>G XM_005273218.1:c.226+10934T>C
RGS7 transcript variant X2 XM_005273219.1:c.226+10934= XM_005273219.1:c.226+10934T>G XM_005273219.1:c.226+10934T>C
RGS7 transcript variant X3 XM_005273220.1:c.226+10934= XM_005273220.1:c.226+10934T>G XM_005273220.1:c.226+10934T>C
RGS7 transcript variant X4 XM_005273221.1:c.148+10934= XM_005273221.1:c.148+10934T>G XM_005273221.1:c.148+10934T>C
RGS7 transcript variant X5 XM_005273222.1:c.226+10934= XM_005273222.1:c.226+10934T>G XM_005273222.1:c.226+10934T>C
RGS7 transcript variant X6 XM_005273223.1:c.226+10934= XM_005273223.1:c.226+10934T>G XM_005273223.1:c.226+10934T>C
RGS7 transcript variant X2 XM_017002009.2:c.148+10934= XM_017002009.2:c.148+10934T>G XM_017002009.2:c.148+10934T>C
RGS7 transcript variant X1 XM_047426980.1:c.148+10934= XM_047426980.1:c.148+10934T>G XM_047426980.1:c.148+10934T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

69 SubSNP, 21 Frequency submissions
No Submitter Submission ID Date (Build)
1 WI_SSAHASNP ss6415038 Feb 20, 2003 (111)
2 PERLEGEN ss24713740 Sep 20, 2004 (123)
3 BCMHGSC_JDW ss88032092 Mar 23, 2008 (129)
4 HUMANGENOME_JCVI ss99301612 Feb 04, 2009 (130)
5 BGI ss106644301 Feb 04, 2009 (130)
6 1000GENOMES ss109091133 Jan 23, 2009 (130)
7 1000GENOMES ss112036399 Jan 25, 2009 (130)
8 ENSEMBL ss138184862 Dec 01, 2009 (131)
9 ENSEMBL ss139016478 Dec 01, 2009 (131)
10 GMI ss156502024 Dec 01, 2009 (131)
11 COMPLETE_GENOMICS ss165538074 Jul 04, 2010 (132)
12 COMPLETE_GENOMICS ss165934864 Jul 04, 2010 (132)
13 BUSHMAN ss199837380 Jul 04, 2010 (132)
14 1000GENOMES ss218977977 Jul 14, 2010 (132)
15 1000GENOMES ss230974515 Jul 14, 2010 (132)
16 1000GENOMES ss238574310 Jul 15, 2010 (132)
17 GMI ss276288967 May 04, 2012 (137)
18 PJP ss290770713 May 09, 2011 (134)
19 TISHKOFF ss555253336 Apr 25, 2013 (138)
20 SSMP ss648827556 Apr 25, 2013 (138)
21 EVA-GONL ss976330867 Aug 21, 2014 (142)
22 JMKIDD_LAB ss1068742729 Aug 21, 2014 (142)
23 1000GENOMES ss1295336298 Aug 21, 2014 (142)
24 DDI ss1426167360 Apr 01, 2015 (144)
25 EVA_GENOME_DK ss1574799185 Apr 01, 2015 (144)
26 EVA_DECODE ss1585735155 Apr 01, 2015 (144)
27 EVA_UK10K_ALSPAC ss1602508405 Apr 01, 2015 (144)
28 EVA_UK10K_TWINSUK ss1645502438 Apr 01, 2015 (144)
29 HAMMER_LAB ss1795997936 Sep 08, 2015 (146)
30 WEILL_CORNELL_DGM ss1919552509 Feb 12, 2016 (147)
31 GENOMED ss1967017936 Jul 19, 2016 (147)
32 JJLAB ss2020303891 Sep 14, 2016 (149)
33 USC_VALOUEV ss2148341852 Dec 20, 2016 (150)
34 HUMAN_LONGEVITY ss2171498631 Dec 20, 2016 (150)
35 SYSTEMSBIOZJU ss2624665364 Nov 08, 2017 (151)
36 GRF ss2698345328 Nov 08, 2017 (151)
37 GNOMAD ss2768141400 Nov 08, 2017 (151)
38 SWEGEN ss2988736770 Nov 08, 2017 (151)
39 BIOINF_KMB_FNS_UNIBA ss3023914315 Nov 08, 2017 (151)
40 CSHL ss3343996334 Nov 08, 2017 (151)
41 URBANLAB ss3646926663 Oct 11, 2018 (152)
42 EGCUT_WGS ss3656697935 Jul 12, 2019 (153)
43 EVA_DECODE ss3688975575 Jul 12, 2019 (153)
44 ACPOP ss3728018536 Jul 12, 2019 (153)
45 EVA ss3747553153 Jul 12, 2019 (153)
46 PACBIO ss3783736827 Jul 12, 2019 (153)
47 PACBIO ss3789341724 Jul 12, 2019 (153)
48 PACBIO ss3794214181 Jul 12, 2019 (153)
49 KHV_HUMAN_GENOMES ss3800556573 Jul 12, 2019 (153)
50 EVA ss3826737787 Apr 25, 2020 (154)
51 EVA ss3836771747 Apr 25, 2020 (154)
52 EVA ss3842184696 Apr 25, 2020 (154)
53 SGDP_PRJ ss3851261454 Apr 25, 2020 (154)
54 KRGDB ss3896621703 Apr 25, 2020 (154)
55 KOGIC ss3946845535 Apr 25, 2020 (154)
56 TOPMED ss4489490614 Apr 25, 2021 (155)
57 TOMMO_GENOMICS ss5149216895 Apr 25, 2021 (155)
58 1000G_HIGH_COVERAGE ss5246398793 Oct 17, 2022 (156)
59 EVA ss5325885963 Oct 17, 2022 (156)
60 HUGCELL_USP ss5446778517 Oct 17, 2022 (156)
61 1000G_HIGH_COVERAGE ss5520795910 Oct 17, 2022 (156)
62 SANFORD_IMAGENETICS ss5627793003 Oct 17, 2022 (156)
63 TOMMO_GENOMICS ss5677204121 Oct 17, 2022 (156)
64 YY_MCH ss5801795289 Oct 17, 2022 (156)
65 EVA ss5833508698 Oct 17, 2022 (156)
66 EVA ss5849365627 Oct 17, 2022 (156)
67 EVA ss5912666221 Oct 17, 2022 (156)
68 EVA ss5939643551 Oct 17, 2022 (156)
69 EVA ss5980026692 Oct 17, 2022 (156)
70 1000Genomes NC_000001.10 - 241135445 Oct 11, 2018 (152)
71 1000Genomes_30x NC_000001.11 - 240972145 Oct 17, 2022 (156)
72 The Avon Longitudinal Study of Parents and Children NC_000001.10 - 241135445 Oct 11, 2018 (152)
73 Genetic variation in the Estonian population NC_000001.10 - 241135445 Oct 11, 2018 (152)
74 The Danish reference pan genome NC_000001.10 - 241135445 Apr 25, 2020 (154)
75 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 44479927 (NC_000001.11:240972144:A:C 8/140084)
Row 44479928 (NC_000001.11:240972144:A:G 59931/140018)

- Apr 25, 2021 (155)
76 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 44479927 (NC_000001.11:240972144:A:C 8/140084)
Row 44479928 (NC_000001.11:240972144:A:G 59931/140018)

- Apr 25, 2021 (155)
77 Genome of the Netherlands Release 5 NC_000001.10 - 241135445 Apr 25, 2020 (154)
78 HapMap NC_000001.11 - 240972145 Apr 25, 2020 (154)
79 KOREAN population from KRGDB NC_000001.10 - 241135445 Apr 25, 2020 (154)
80 Korean Genome Project NC_000001.11 - 240972145 Apr 25, 2020 (154)
81 Northern Sweden NC_000001.10 - 241135445 Jul 12, 2019 (153)
82 Qatari NC_000001.10 - 241135445 Apr 25, 2020 (154)
83 SGDP_PRJ NC_000001.10 - 241135445 Apr 25, 2020 (154)
84 Siberian NC_000001.10 - 241135445 Apr 25, 2020 (154)
85 8.3KJPN NC_000001.10 - 241135445 Apr 25, 2021 (155)
86 14KJPN NC_000001.11 - 240972145 Oct 17, 2022 (156)
87 TopMed NC_000001.11 - 240972145 Apr 25, 2021 (155)
88 UK 10K study - Twins NC_000001.10 - 241135445 Oct 11, 2018 (152)
89 A Vietnamese Genetic Variation Database NC_000001.10 - 241135445 Jul 12, 2019 (153)
90 ALFA NC_000001.11 - 240972145 Apr 25, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs17823775 Oct 07, 2004 (123)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss2768141400, ss5627793003 NC_000001.10:241135444:A:C NC_000001.11:240972144:A:C (self)
8321845, 6336970515, ss2171498631, ss5520795910 NC_000001.11:240972144:A:C NC_000001.11:240972144:A:C (self)
ss88032092, ss109091133, ss112036399, ss165538074, ss165934864, ss199837380, ss276288967, ss290770713, ss1585735155 NC_000001.9:239202067:A:G NC_000001.11:240972144:A:G (self)
6216523, 3444667, 2436183, 1960374, 1508954, 3799097, 1303401, 1594439, 3278434, 858206, 7186202, 3444667, 751231, ss218977977, ss230974515, ss238574310, ss555253336, ss648827556, ss976330867, ss1068742729, ss1295336298, ss1426167360, ss1574799185, ss1602508405, ss1645502438, ss1795997936, ss1919552509, ss1967017936, ss2020303891, ss2148341852, ss2624665364, ss2698345328, ss2768141400, ss2988736770, ss3343996334, ss3656697935, ss3728018536, ss3747553153, ss3783736827, ss3789341724, ss3794214181, ss3826737787, ss3836771747, ss3851261454, ss3896621703, ss5149216895, ss5325885963, ss5627793003, ss5833508698, ss5939643551, ss5980026692 NC_000001.10:241135444:A:G NC_000001.11:240972144:A:G (self)
8321845, 306018, 3223536, 11041225, 53096949, 6336970515, ss2171498631, ss3023914315, ss3646926663, ss3688975575, ss3800556573, ss3842184696, ss3946845535, ss4489490614, ss5246398793, ss5446778517, ss5520795910, ss5677204121, ss5801795289, ss5849365627, ss5912666221 NC_000001.11:240972144:A:G NC_000001.11:240972144:A:G (self)
ss6415038, ss24713740, ss99301612, ss106644301, ss138184862, ss139016478, ss156502024 NT_167186.1:34653223:A:G NC_000001.11:240972144:A:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs4660016

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07