Name: rs4654925
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs4654925

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:19901230 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>C / G>T
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.454449 (120288/264690, TOPMED)
C=0.43201 (32566/75382, ALFA)
C=0.16271 (4598/28258, 14KJPN) (+ 19 more)
C=0.16152 (2707/16760, 8.3KJPN)
C=0.3838 (2458/6404, 1000G_30x)
C=0.3742 (1874/5008, 1000G)
G=0.4799 (2150/4480, Estonian)
C=0.4691 (1808/3854, ALSPAC)
C=0.4536 (1682/3708, TWINSUK)
C=0.2341 (684/2922, KOREAN)
C=0.2429 (445/1832, Korea1K)
G=0.491 (490/998, GoNL)
C=0.276 (210/760, PRJEB37584)
C=0.482 (289/600, NorthernSweden)
G=0.353 (118/334, SGDP_PRJ)
C=0.396 (130/328, HapMap)
C=0.421 (91/216, Qatari)
C=0.212 (45/212, Vietnamese)
G=0.50 (20/40, GENOME_DK)
C=0.50 (20/40, GENOME_DK)
G=0.40 (16/40, Ancient Sardinia)
G=0.38 (12/32, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: OTUD3 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	75382	G=0.56799	C=0.43201, T=0.00000
European	Sub	68150	G=0.55105	C=0.44895, T=0.00000
African	Sub	1680	G=0.7399	C=0.2601, T=0.0000
African Others	Sub	90	G=0.62	C=0.38, T=0.00
African American	Sub	1590	G=0.7465	C=0.2535, T=0.0000
Asian	Sub	3200	G=0.7675	C=0.2325, T=0.0000
East Asian	Sub	2586	G=0.7552	C=0.2448, T=0.0000
Other Asian	Sub	614	G=0.819	C=0.181, T=0.000
Latin American 1	Sub	332	G=0.578	C=0.422, T=0.000
Latin American 2	Sub	458	G=0.640	C=0.360, T=0.000
South Asian	Sub	216	G=0.681	C=0.319, T=0.000
Other	Sub	1346	G=0.6917	C=0.3083, T=0.0000

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.545551	C=0.454449
Allele Frequency Aggregator	Total	Global	75382	G=0.56799	C=0.43201, T=0.00000
Allele Frequency Aggregator	European	Sub	68150	G=0.55105	C=0.44895, T=0.00000
Allele Frequency Aggregator	Asian	Sub	3200	G=0.7675	C=0.2325, T=0.0000
Allele Frequency Aggregator	African	Sub	1680	G=0.7399	C=0.2601, T=0.0000
Allele Frequency Aggregator	Other	Sub	1346	G=0.6917	C=0.3083, T=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	458	G=0.640	C=0.360, T=0.000
Allele Frequency Aggregator	Latin American 1	Sub	332	G=0.578	C=0.422, T=0.000
Allele Frequency Aggregator	South Asian	Sub	216	G=0.681	C=0.319, T=0.000
14KJPN	JAPANESE	Study-wide	28258	G=0.83729	C=0.16271
8.3KJPN	JAPANESE	Study-wide	16760	G=0.83848	C=0.16152
1000Genomes_30x	Global	Study-wide	6404	G=0.6101	C=0.3838, T=0.0061
1000Genomes_30x	African	Sub	1786	G=0.5498	C=0.4295, T=0.0207
1000Genomes_30x	Europe	Sub	1266	G=0.5442	C=0.4558, T=0.0000
1000Genomes_30x	South Asian	Sub	1202	G=0.6997	C=0.3003, T=0.0000
1000Genomes_30x	East Asian	Sub	1170	G=0.7675	C=0.2325, T=0.0000
1000Genomes_30x	American	Sub	980	G=0.507	C=0.491, T=0.002
1000Genomes	Global	Study-wide	5008	G=0.6198	C=0.3742, T=0.0060
1000Genomes	African	Sub	1322	G=0.5499	C=0.4289, T=0.0212
1000Genomes	East Asian	Sub	1008	G=0.7669	C=0.2331, T=0.0000
1000Genomes	Europe	Sub	1006	G=0.5557	C=0.4443, T=0.0000
1000Genomes	South Asian	Sub	978	G=0.702	C=0.298, T=0.000
1000Genomes	American	Sub	694	G=0.516	C=0.481, T=0.003
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.4799	C=0.5201
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.5309	C=0.4691
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.5464	C=0.4536
KOREAN population from KRGDB	KOREAN	Study-wide	2922	G=0.7659	C=0.2341
Korean Genome Project	KOREAN	Study-wide	1832	G=0.7571	C=0.2429
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.491	C=0.509
CNV burdens in cranial meningiomas	Global	Study-wide	760	G=0.724	C=0.276
CNV burdens in cranial meningiomas	CRM	Sub	760	G=0.724	C=0.276
Northern Sweden	ACPOP	Study-wide	600	G=0.518	C=0.482
SGDP_PRJ	Global	Study-wide	334	G=0.353	C=0.638, T=0.009
HapMap	Global	Study-wide	328	G=0.604	C=0.396
HapMap	African	Sub	120	G=0.575	C=0.425
HapMap	American	Sub	120	G=0.467	C=0.533
HapMap	Asian	Sub	88	G=0.83	C=0.17
Qatari	Global	Study-wide	216	G=0.579	C=0.421
A Vietnamese Genetic Variation Database	Global	Study-wide	212	G=0.788	C=0.212
The Danish reference pan genome	Danish	Study-wide	40	G=0.50	C=0.50
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	40	G=0.40	C=0.60
Siberian	Global	Study-wide	32	G=0.38	C=0.62

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.19901230G>C
GRCh38.p14 chr 1	NC_000001.11:g.19901230G>T
GRCh37.p13 chr 1	NC_000001.10:g.20227723G>C
GRCh37.p13 chr 1	NC_000001.10:g.20227723G>T

Gene: OTUD3, OTU deubiquitinase 3 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
OTUD3 transcript	NM_015207.2:c.607-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X1	XM_005245792.5:c.607-3037… XM_005245792.5:c.607-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X2	XM_005245793.5:c.607-3037… XM_005245793.5:c.607-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X5	XM_024454320.2:c.301-3037… XM_024454320.2:c.301-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X3	XM_047415799.1:c.607-3037… XM_047415799.1:c.607-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X4	XM_047415806.1:c.424-3037… XM_047415806.1:c.424-3037G>C	N/A	Intron Variant
OTUD3 transcript variant X6	XM_047415825.1:c.148-3037… XM_047415825.1:c.148-3037G>C	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	C	T
GRCh38.p14 chr 1	NC_000001.11:g.19901230=	NC_000001.11:g.19901230G>C	NC_000001.11:g.19901230G>T
GRCh37.p13 chr 1	NC_000001.10:g.20227723=	NC_000001.10:g.20227723G>C	NC_000001.10:g.20227723G>T
OTUD3 transcript	NM_015207.1:c.607-3037=	NM_015207.1:c.607-3037G>C	NM_015207.1:c.607-3037G>T
OTUD3 transcript	NM_015207.2:c.607-3037=	NM_015207.2:c.607-3037G>C	NM_015207.2:c.607-3037G>T
OTUD3 transcript variant X1	XM_005245792.1:c.832-3037=	XM_005245792.1:c.832-3037G>C	XM_005245792.1:c.832-3037G>T
OTUD3 transcript variant X1	XM_005245792.5:c.607-3037=	XM_005245792.5:c.607-3037G>C	XM_005245792.5:c.607-3037G>T
OTUD3 transcript variant X2	XM_005245793.1:c.832-3037=	XM_005245793.1:c.832-3037G>C	XM_005245793.1:c.832-3037G>T
OTUD3 transcript variant X2	XM_005245793.5:c.607-3037=	XM_005245793.5:c.607-3037G>C	XM_005245793.5:c.607-3037G>T
OTUD3 transcript variant X3	XM_005245794.1:c.148-3037=	XM_005245794.1:c.148-3037G>C	XM_005245794.1:c.148-3037G>T
OTUD3 transcript variant X5	XM_024454320.2:c.301-3037=	XM_024454320.2:c.301-3037G>C	XM_024454320.2:c.301-3037G>T
OTUD3 transcript variant X3	XM_047415799.1:c.607-3037=	XM_047415799.1:c.607-3037G>C	XM_047415799.1:c.607-3037G>T
OTUD3 transcript variant X4	XM_047415806.1:c.424-3037=	XM_047415806.1:c.424-3037G>C	XM_047415806.1:c.424-3037G>T
OTUD3 transcript variant X6	XM_047415825.1:c.148-3037=	XM_047415825.1:c.148-3037G>C	XM_047415825.1:c.148-3037G>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

91 SubSNP, 23 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	WI_SSAHASNP	ss6406607	Feb 20, 2003 (111)
2	WI_SSAHASNP	ss11343637	Jul 11, 2003 (116)
3	PERLEGEN	ss23179458	Sep 20, 2004 (123)
4	HGSV	ss83845099	Dec 14, 2007 (130)
5	HGSV	ss85737546	Dec 14, 2007 (130)
6	1000GENOMES	ss108042566	Jan 22, 2009 (130)
7	ILLUMINA-UK	ss118545855	Dec 01, 2009 (131)
8	COMPLETE_GENOMICS	ss163152009	Jul 04, 2010 (132)
9	BCM-HGSC-SUB	ss205395250	Jul 04, 2010 (132)
10	1000GENOMES	ss210482344	Jul 14, 2010 (132)
11	1000GENOMES	ss218270795	Jul 14, 2010 (132)
12	1000GENOMES	ss230452508	Jul 14, 2010 (132)
13	1000GENOMES	ss238162701	Jul 15, 2010 (132)
14	GMI	ss275743490	May 04, 2012 (137)
15	PJP	ss290781003	May 09, 2011 (134)
16	EXOME_CHIP	ss491288335	May 04, 2012 (137)
17	SSMP	ss647623674	Apr 25, 2013 (138)
18	ILLUMINA	ss783358659	Sep 08, 2015 (146)
19	EVA-GONL	ss974920945	Aug 21, 2014 (142)
20	JMKIDD_LAB	ss1067717132	Aug 21, 2014 (142)
21	1000GENOMES	ss1289937937	Aug 21, 2014 (142)
22	1000GENOMES	ss1289937938	Aug 21, 2014 (142)
23	DDI	ss1425737066	Apr 01, 2015 (144)
24	EVA_GENOME_DK	ss1573925634	Apr 01, 2015 (144)
25	EVA_DECODE	ss1584278836	Apr 01, 2015 (144)
26	EVA_UK10K_ALSPAC	ss1599675773	Apr 01, 2015 (144)
27	EVA_UK10K_TWINSUK	ss1642669806	Apr 01, 2015 (144)
28	ILLUMINA	ss1751892030	Sep 08, 2015 (146)
29	HAMMER_LAB	ss1794020009	Sep 08, 2015 (146)
30	ILLUMINA	ss1917724087	Feb 12, 2016 (147)
31	WEILL_CORNELL_DGM	ss1918132686	Feb 12, 2016 (147)
32	ILLUMINA	ss1945987090	Feb 12, 2016 (147)
33	ILLUMINA	ss1958249848	Feb 12, 2016 (147)
34	JJLAB	ss2019577946	Sep 14, 2016 (149)
35	ILLUMINA	ss2094841798	Dec 20, 2016 (150)
36	ILLUMINA	ss2094954978	Dec 20, 2016 (150)
37	ILLUMINA	ss2094954980	Dec 20, 2016 (150)
38	USC_VALOUEV	ss2147581365	Dec 20, 2016 (150)
39	HUMAN_LONGEVITY	ss2160524513	Dec 20, 2016 (150)
40	SYSTEMSBIOZJU	ss2624305247	Nov 08, 2017 (151)
41	ILLUMINA	ss2632486465	Nov 08, 2017 (151)
42	ILLUMINA	ss2632486466	Nov 08, 2017 (151)
43	GRF	ss2697485828	Nov 08, 2017 (151)
44	GNOMAD	ss2752384540	Nov 08, 2017 (151)
45	AFFY	ss2985500617	Nov 08, 2017 (151)
46	SWEGEN	ss2986424719	Nov 08, 2017 (151)
47	ILLUMINA	ss3021063211	Nov 08, 2017 (151)
48	BIOINF_KMB_FNS_UNIBA	ss3023554020	Nov 08, 2017 (151)
49	CSHL	ss3343355296	Nov 08, 2017 (151)
50	ILLUMINA	ss3626042213	Oct 11, 2018 (152)
51	ILLUMINA	ss3634310944	Oct 11, 2018 (152)
52	ILLUMINA	ss3640018308	Oct 11, 2018 (152)
53	ILLUMINA	ss3644482942	Oct 11, 2018 (152)
54	ILLUMINA	ss3651388041	Oct 11, 2018 (152)
55	ILLUMINA	ss3651388042	Oct 11, 2018 (152)
56	ILLUMINA	ss3651388043	Oct 11, 2018 (152)
57	EGCUT_WGS	ss3654495089	Jul 12, 2019 (153)
58	EVA_DECODE	ss3686295131	Jul 12, 2019 (153)
59	ACPOP	ss3726847996	Jul 12, 2019 (153)
60	ILLUMINA	ss3744340779	Jul 12, 2019 (153)
61	ILLUMINA	ss3744611906	Jul 12, 2019 (153)
62	EVA	ss3745910232	Jul 12, 2019 (153)
63	ILLUMINA	ss3772113479	Jul 12, 2019 (153)
64	KHV_HUMAN_GENOMES	ss3798930796	Jul 12, 2019 (153)
65	KHV_HUMAN_GENOMES	ss3798930797	Jul 12, 2019 (153)
66	EVA	ss3826057872	Apr 25, 2020 (154)
67	EVA	ss3836416842	Apr 25, 2020 (154)
68	EVA	ss3841821249	Apr 25, 2020 (154)
69	SGDP_PRJ	ss3848354091	Apr 25, 2020 (154)
70	KRGDB	ss3893261584	Apr 25, 2020 (154)
71	KOGIC	ss3943978716	Apr 25, 2020 (154)
72	EVA	ss3984453343	Apr 27, 2021 (155)
73	EVA	ss3984782644	Apr 27, 2021 (155)
74	TOPMED	ss4441288262	Apr 27, 2021 (155)
75	TOMMO_GENOMICS	ss5142811893	Apr 27, 2021 (155)
76	EVA	ss5237261488	Apr 27, 2021 (155)
77	1000G_HIGH_COVERAGE	ss5241420893	Oct 12, 2022 (156)
78	1000G_HIGH_COVERAGE	ss5241420894	Oct 12, 2022 (156)
79	EVA	ss5314598564	Oct 12, 2022 (156)
80	HUGCELL_USP	ss5442579920	Oct 12, 2022 (156)
81	HUGCELL_USP	ss5442579921	Oct 12, 2022 (156)
82	1000G_HIGH_COVERAGE	ss5513287526	Oct 12, 2022 (156)
83	SANFORD_IMAGENETICS	ss5624198680	Oct 12, 2022 (156)
84	SANFORD_IMAGENETICS	ss5625064006	Oct 12, 2022 (156)
85	TOMMO_GENOMICS	ss5667212386	Oct 12, 2022 (156)
86	YY_MCH	ss5800390376	Oct 12, 2022 (156)
87	EVA	ss5831634122	Oct 12, 2022 (156)
88	EVA	ss5848812769	Oct 12, 2022 (156)
89	EVA	ss5936878880	Oct 12, 2022 (156)
90	EVA	ss5979265691	Oct 12, 2022 (156)
91	EVA	ss5979940747	Oct 12, 2022 (156)
92	1000Genomes	NC_000001.10 - 20227723	Oct 11, 2018 (152)
93	1000Genomes_30x	NC_000001.11 - 19901230	Oct 12, 2022 (156)
94	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 20227723	Oct 11, 2018 (152)
95	Genetic variation in the Estonian population	NC_000001.10 - 20227723	Oct 11, 2018 (152)
96	The Danish reference pan genome	NC_000001.10 - 20227723	Apr 25, 2020 (154)
97	gnomAD - Genomes Submission ignored due to conflicting rows: Row 4325910 (NC_000001.11:19901229:G:C 64688/139882) Row 4325911 (NC_000001.11:19901229:G:T 729/139930)	-	Apr 27, 2021 (155)
98	gnomAD - Genomes Submission ignored due to conflicting rows: Row 4325910 (NC_000001.11:19901229:G:C 64688/139882) Row 4325911 (NC_000001.11:19901229:G:T 729/139930)	-	Apr 27, 2021 (155)
99	Genome of the Netherlands Release 5	NC_000001.10 - 20227723	Apr 25, 2020 (154)
100	HapMap	NC_000001.11 - 19901230	Apr 25, 2020 (154)
101	KOREAN population from KRGDB	NC_000001.10 - 20227723	Apr 25, 2020 (154)
102	Korean Genome Project	NC_000001.11 - 19901230	Apr 25, 2020 (154)
103	Northern Sweden	NC_000001.10 - 20227723	Jul 12, 2019 (153)
104	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000001.10 - 20227723	Apr 27, 2021 (155)
105	CNV burdens in cranial meningiomas	NC_000001.10 - 20227723	Apr 27, 2021 (155)
106	Qatari	NC_000001.10 - 20227723	Apr 25, 2020 (154)
107	SGDP_PRJ	NC_000001.10 - 20227723	Apr 25, 2020 (154)
108	Siberian	NC_000001.10 - 20227723	Apr 25, 2020 (154)
109	8.3KJPN	NC_000001.10 - 20227723	Apr 27, 2021 (155)
110	14KJPN	NC_000001.11 - 19901230	Oct 12, 2022 (156)
111	TopMed	NC_000001.11 - 19901230	Apr 27, 2021 (155)
112	UK 10K study - Twins	NC_000001.10 - 20227723	Oct 11, 2018 (152)
113	A Vietnamese Genetic Variation Database	NC_000001.10 - 20227723	Jul 12, 2019 (153)
114	ALFA	NC_000001.11 - 19901230	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs57489276	May 23, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss83845099, ss85737546	NC_000001.8:19973028:G:C	NC_000001.11:19901229:G:C	(self)
ss108042566, ss118545855, ss163152009, ss205395250, ss210482344, ss275743490, ss290781003, ss1584278836, ss2094841798	NC_000001.9:20100309:G:C	NC_000001.11:19901229:G:C	(self)
622471, 327116, 233337, 1415917, 142250, 438978, 132861, 8571, 2645, 174616, 371071, 97719, 781200, 327116, 70263, ss218270795, ss230452508, ss238162701, ss491288335, ss647623674, ss783358659, ss974920945, ss1067717132, ss1289937937, ss1425737066, ss1573925634, ss1599675773, ss1642669806, ss1751892030, ss1794020009, ss1917724087, ss1918132686, ss1945987090, ss1958249848, ss2019577946, ss2094954978, ss2094954980, ss2147581365, ss2624305247, ss2632486465, ss2632486466, ss2697485828, ss2752384540, ss2985500617, ss2986424719, ss3021063211, ss3343355296, ss3626042213, ss3634310944, ss3640018308, ss3644482942, ss3651388041, ss3651388042, ss3651388043, ss3654495089, ss3726847996, ss3744340779, ss3744611906, ss3745910232, ss3772113479, ss3826057872, ss3836416842, ss3848354091, ss3893261584, ss3984453343, ss3984782644, ss5142811893, ss5237261488, ss5314598564, ss5624198680, ss5625064006, ss5831634122, ss5936878880, ss5979265691, ss5979940747	NC_000001.10:20227722:G:C	NC_000001.11:19901229:G:C	(self)
813461, 25351, 356717, 1049490, 4894597, 13214439111, ss2160524513, ss3023554020, ss3686295131, ss3798930796, ss3841821249, ss3943978716, ss4441288262, ss5241420893, ss5442579920, ss5513287526, ss5667212386, ss5800390376, ss5848812769	NC_000001.11:19901229:G:C	NC_000001.11:19901229:G:C	(self)
ss11343637	NT_004610.15:1030972:G:C	NC_000001.11:19901229:G:C	(self)
ss6406607, ss23179458	NT_004610.19:6907810:G:C	NC_000001.11:19901229:G:C	(self)
622471, 371071, ss1289937938, ss1794020009, ss2752384540, ss3848354091, ss5625064006	NC_000001.10:20227722:G:T	NC_000001.11:19901229:G:T	(self)
813461, 13214439111, ss2160524513, ss3798930797, ss5241420894, ss5442579921, ss5513287526	NC_000001.11:19901229:G:T	NC_000001.11:19901229:G:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs4654925

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs4654925