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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs4533267

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr15:100246066 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C / A>G
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.301007 (103155/342700, ALFA)
A=0.378798 (100264/264690, TOPMED)
A=0.369670 (51753/139998, GnomAD) (+ 20 more)
A=0.40604 (31956/78702, PAGE_STUDY)
A=0.11087 (3133/28258, 14KJPN)
A=0.11187 (1875/16760, 8.3KJPN)
A=0.3431 (2197/6404, 1000G_30x)
A=0.3317 (1661/5008, 1000G)
A=0.2513 (1126/4480, Estonian)
A=0.2862 (1103/3854, ALSPAC)
A=0.3010 (1116/3708, TWINSUK)
A=0.1512 (443/2930, KOREAN)
A=0.3330 (694/2084, HGDP_Stanford)
A=0.1507 (276/1832, Korea1K)
A=0.2558 (288/1126, Daghestan)
A=0.288 (287/998, GoNL)
A=0.238 (143/600, NorthernSweden)
A=0.233 (114/490, SGDP_PRJ)
A=0.495 (107/216, Qatari)
A=0.241 (51/212, Vietnamese)
A=0.20 (18/88, Ancient Sardinia)
A=0.09 (5/56, Siberian)
A=0.15 (6/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ADAMTS17 : Intron Variant
Publications
6 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 347952 A=0.301976 C=0.000000, G=0.698024
European Sub 297358 A=0.293471 C=0.000000, G=0.706529
African Sub 11342 A=0.58579 C=0.00000, G=0.41421
African Others Sub 422 A=0.621 C=0.000, G=0.379
African American Sub 10920 A=0.58443 C=0.00000, G=0.41557
Asian Sub 6858 A=0.1974 C=0.0000, G=0.8026
East Asian Sub 4914 A=0.1779 C=0.0000, G=0.8221
Other Asian Sub 1944 A=0.2469 C=0.0000, G=0.7531
Latin American 1 Sub 1150 A=0.3774 C=0.0000, G=0.6226
Latin American 2 Sub 8830 A=0.3221 C=0.0000, G=0.6779
South Asian Sub 5144 A=0.2156 C=0.0000, G=0.7844
Other Sub 17270 A=0.31395 C=0.00000, G=0.68605


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 342700 A=0.301007 C=0.000000, G=0.698993
Allele Frequency Aggregator European Sub 294084 A=0.293508 C=0.000000, G=0.706492
Allele Frequency Aggregator Other Sub 16448 A=0.31110 C=0.00000, G=0.68890
Allele Frequency Aggregator African Sub 10186 A=0.58718 C=0.00000, G=0.41282
Allele Frequency Aggregator Latin American 2 Sub 8830 A=0.3221 C=0.0000, G=0.6779
Allele Frequency Aggregator Asian Sub 6858 A=0.1974 C=0.0000, G=0.8026
Allele Frequency Aggregator South Asian Sub 5144 A=0.2156 C=0.0000, G=0.7844
Allele Frequency Aggregator Latin American 1 Sub 1150 A=0.3774 C=0.0000, G=0.6226
TopMed Global Study-wide 264690 A=0.378798 G=0.621202
gnomAD - Genomes Global Study-wide 139998 A=0.369670 G=0.630330
gnomAD - Genomes European Sub 75848 A=0.27865 G=0.72135
gnomAD - Genomes African Sub 41908 A=0.55717 G=0.44283
gnomAD - Genomes American Sub 13642 A=0.33521 G=0.66479
gnomAD - Genomes Ashkenazi Jewish Sub 3322 A=0.3808 G=0.6192
gnomAD - Genomes East Asian Sub 3130 A=0.2198 G=0.7802
gnomAD - Genomes Other Sub 2148 A=0.3454 G=0.6546
The PAGE Study Global Study-wide 78702 A=0.40604 G=0.59396
The PAGE Study AfricanAmerican Sub 32516 A=0.54964 G=0.45036
The PAGE Study Mexican Sub 10810 A=0.32414 G=0.67586
The PAGE Study Asian Sub 8318 A=0.1419 G=0.8581
The PAGE Study PuertoRican Sub 7918 A=0.3867 G=0.6133
The PAGE Study NativeHawaiian Sub 4534 A=0.2543 G=0.7457
The PAGE Study Cuban Sub 4230 A=0.3494 G=0.6506
The PAGE Study Dominican Sub 3828 A=0.4399 G=0.5601
The PAGE Study CentralAmerican Sub 2450 A=0.3461 G=0.6539
The PAGE Study SouthAmerican Sub 1982 A=0.2790 G=0.7210
The PAGE Study NativeAmerican Sub 1260 A=0.3381 G=0.6619
The PAGE Study SouthAsian Sub 856 A=0.229 G=0.771
14KJPN JAPANESE Study-wide 28258 A=0.11087 G=0.88913
8.3KJPN JAPANESE Study-wide 16760 A=0.11187 G=0.88813
1000Genomes_30x Global Study-wide 6404 A=0.3431 G=0.6569
1000Genomes_30x African Sub 1786 A=0.6153 G=0.3847
1000Genomes_30x Europe Sub 1266 A=0.2765 G=0.7235
1000Genomes_30x South Asian Sub 1202 A=0.1922 G=0.8078
1000Genomes_30x East Asian Sub 1170 A=0.2026 G=0.7974
1000Genomes_30x American Sub 980 A=0.286 G=0.714
1000Genomes Global Study-wide 5008 A=0.3317 G=0.6683
1000Genomes African Sub 1322 A=0.6074 G=0.3926
1000Genomes East Asian Sub 1008 A=0.1944 G=0.8056
1000Genomes Europe Sub 1006 A=0.2783 G=0.7217
1000Genomes South Asian Sub 978 A=0.187 G=0.813
1000Genomes American Sub 694 A=0.287 G=0.713
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.2513 G=0.7487
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.2862 G=0.7138
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.3010 G=0.6990
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.1512 G=0.8488
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 A=0.3330 G=0.6670
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.206 G=0.794
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.280 G=0.720
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.434 G=0.566
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.272 G=0.728
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.612 G=0.388
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.361 G=0.639
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.22 G=0.78
Korean Genome Project KOREAN Study-wide 1832 A=0.1507 G=0.8493
Genome-wide autozygosity in Daghestan Global Study-wide 1126 A=0.2558 G=0.7442
Genome-wide autozygosity in Daghestan Daghestan Sub 620 A=0.253 G=0.747
Genome-wide autozygosity in Daghestan Near_East Sub 144 A=0.312 G=0.688
Genome-wide autozygosity in Daghestan Central Asia Sub 122 A=0.213 G=0.787
Genome-wide autozygosity in Daghestan Europe Sub 106 A=0.264 G=0.736
Genome-wide autozygosity in Daghestan South Asian Sub 98 A=0.18 G=0.82
Genome-wide autozygosity in Daghestan Caucasus Sub 36 A=0.39 G=0.61
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.288 G=0.712
Northern Sweden ACPOP Study-wide 600 A=0.238 G=0.762
SGDP_PRJ Global Study-wide 490 A=0.233 G=0.767
Qatari Global Study-wide 216 A=0.495 G=0.505
A Vietnamese Genetic Variation Database Global Study-wide 212 A=0.241 G=0.759
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 88 A=0.20 G=0.80
Siberian Global Study-wide 56 A=0.09 G=0.91
The Danish reference pan genome Danish Study-wide 40 A=0.15 G=0.85
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 15 NC_000015.10:g.100246066A>C
GRCh38.p14 chr 15 NC_000015.10:g.100246066A>G
GRCh37.p13 chr 15 NC_000015.9:g.100786271A>C
GRCh37.p13 chr 15 NC_000015.9:g.100786271A>G
ADAMTS17 RefSeqGene NG_016287.2:g.100913T>G
ADAMTS17 RefSeqGene NG_016287.2:g.100913T>C
Gene: ADAMTS17, ADAM metallopeptidase with thrombospondin type 1 motif 17 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
ADAMTS17 transcript NM_139057.4:c.1075+8070T>G N/A Intron Variant
ADAMTS17 transcript variant X5 XM_005254872.4:c.1075+807…

XM_005254872.4:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X4 XM_011521312.3:c.1075+807…

XM_011521312.3:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X1 XM_017021973.3:c.1075+807…

XM_017021973.3:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X2 XM_017021974.2:c.1075+807…

XM_017021974.2:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X3 XM_017021975.2:c.1075+807…

XM_017021975.2:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X6 XM_017021977.2:c.1075+807…

XM_017021977.2:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X11 XM_017021979.2:c.-8+8070T…

XM_017021979.2:c.-8+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X13 XM_017021981.2:c.1075+807…

XM_017021981.2:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X17 XM_017021984.2:c.346+8070…

XM_017021984.2:c.346+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X14 XM_047432213.1:c.1075+807…

XM_047432213.1:c.1075+8070T>G

N/A Intron Variant
ADAMTS17 transcript variant X10 XM_017021978.2:c. N/A Genic Upstream Transcript Variant
ADAMTS17 transcript variant X12 XM_017021980.2:c. N/A Genic Upstream Transcript Variant
ADAMTS17 transcript variant X15 XM_017021982.2:c. N/A Genic Upstream Transcript Variant
ADAMTS17 transcript variant X16 XM_017021983.2:c. N/A Genic Upstream Transcript Variant
ADAMTS17 transcript variant X7 XR_001751118.2:n. N/A Intron Variant
ADAMTS17 transcript variant X8 XR_001751119.2:n. N/A Intron Variant
ADAMTS17 transcript variant X9 XR_001751120.2:n. N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C G
GRCh38.p14 chr 15 NC_000015.10:g.100246066= NC_000015.10:g.100246066A>C NC_000015.10:g.100246066A>G
GRCh37.p13 chr 15 NC_000015.9:g.100786271= NC_000015.9:g.100786271A>C NC_000015.9:g.100786271A>G
ADAMTS17 RefSeqGene NG_016287.2:g.100913= NG_016287.2:g.100913T>G NG_016287.2:g.100913T>C
ADAMTS17 transcript NM_139057.2:c.1075+8070= NM_139057.2:c.1075+8070T>G NM_139057.2:c.1075+8070T>C
ADAMTS17 transcript NM_139057.4:c.1075+8070= NM_139057.4:c.1075+8070T>G NM_139057.4:c.1075+8070T>C
ADAMTS17 transcript variant X1 XM_005254872.1:c.1075+8070= XM_005254872.1:c.1075+8070T>G XM_005254872.1:c.1075+8070T>C
ADAMTS17 transcript variant X5 XM_005254872.4:c.1075+8070= XM_005254872.4:c.1075+8070T>G XM_005254872.4:c.1075+8070T>C
ADAMTS17 transcript variant X2 XM_005254873.1:c.346+8070= XM_005254873.1:c.346+8070T>G XM_005254873.1:c.346+8070T>C
ADAMTS17 transcript variant X4 XM_011521312.3:c.1075+8070= XM_011521312.3:c.1075+8070T>G XM_011521312.3:c.1075+8070T>C
ADAMTS17 transcript variant X1 XM_017021973.3:c.1075+8070= XM_017021973.3:c.1075+8070T>G XM_017021973.3:c.1075+8070T>C
ADAMTS17 transcript variant X2 XM_017021974.2:c.1075+8070= XM_017021974.2:c.1075+8070T>G XM_017021974.2:c.1075+8070T>C
ADAMTS17 transcript variant X3 XM_017021975.2:c.1075+8070= XM_017021975.2:c.1075+8070T>G XM_017021975.2:c.1075+8070T>C
ADAMTS17 transcript variant X6 XM_017021977.2:c.1075+8070= XM_017021977.2:c.1075+8070T>G XM_017021977.2:c.1075+8070T>C
ADAMTS17 transcript variant X11 XM_017021979.2:c.-8+8070= XM_017021979.2:c.-8+8070T>G XM_017021979.2:c.-8+8070T>C
ADAMTS17 transcript variant X13 XM_017021981.2:c.1075+8070= XM_017021981.2:c.1075+8070T>G XM_017021981.2:c.1075+8070T>C
ADAMTS17 transcript variant X17 XM_017021984.2:c.346+8070= XM_017021984.2:c.346+8070T>G XM_017021984.2:c.346+8070T>C
ADAMTS17 transcript variant X14 XM_047432213.1:c.1075+8070= XM_047432213.1:c.1075+8070T>G XM_047432213.1:c.1075+8070T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

170 SubSNP, 25 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss6117106 Feb 20, 2003 (111)
2 CSHL-HAPMAP ss19331262 Feb 27, 2004 (120)
3 CSHL-HAPMAP ss20012640 Feb 27, 2004 (120)
4 SSAHASNP ss21289074 Apr 05, 2004 (121)
5 PERLEGEN ss23750178 Sep 20, 2004 (123)
6 ABI ss43776823 Mar 13, 2006 (126)
7 AFFY ss66327478 Nov 29, 2006 (127)
8 ILLUMINA ss66587206 Nov 29, 2006 (127)
9 ILLUMINA ss67343769 Nov 29, 2006 (127)
10 ILLUMINA ss67738108 Nov 29, 2006 (127)
11 PERLEGEN ss69188141 May 16, 2007 (127)
12 ILLUMINA ss70808398 May 24, 2008 (130)
13 ILLUMINA ss71388275 May 16, 2007 (127)
14 ILLUMINA ss74936861 Dec 06, 2007 (129)
15 AFFY ss76021681 Dec 06, 2007 (129)
16 ILLUMINA ss79184770 Dec 14, 2007 (130)
17 KRIBB_YJKIM ss84286246 Dec 14, 2007 (130)
18 BCMHGSC_JDW ss90277533 Mar 24, 2008 (129)
19 HUMANGENOME_JCVI ss96840381 Feb 04, 2009 (130)
20 BGI ss106452082 Feb 04, 2009 (130)
21 1000GENOMES ss109097840 Jan 23, 2009 (130)
22 ILLUMINA-UK ss118359592 Feb 14, 2009 (130)
23 ILLUMINA ss122326042 Dec 01, 2009 (131)
24 ENSEMBL ss136529427 Dec 01, 2009 (131)
25 ENSEMBL ss136807031 Dec 01, 2009 (131)
26 ILLUMINA ss154299120 Dec 01, 2009 (131)
27 GMI ss156944486 Dec 01, 2009 (131)
28 ILLUMINA ss159475983 Dec 01, 2009 (131)
29 ILLUMINA ss160685433 Dec 01, 2009 (131)
30 COMPLETE_GENOMICS ss168590924 Jul 04, 2010 (132)
31 AFFY ss170520405 Jul 04, 2010 (132)
32 COMPLETE_GENOMICS ss171620615 Jul 04, 2010 (132)
33 ILLUMINA ss171817253 Jul 04, 2010 (132)
34 ILLUMINA ss173748634 Jul 04, 2010 (132)
35 BUSHMAN ss201278231 Jul 04, 2010 (132)
36 BCM-HGSC-SUB ss207215311 Jul 04, 2010 (132)
37 1000GENOMES ss211665032 Jul 14, 2010 (132)
38 1000GENOMES ss227077492 Jul 14, 2010 (132)
39 1000GENOMES ss236907834 Jul 15, 2010 (132)
40 1000GENOMES ss243270726 Jul 15, 2010 (132)
41 BL ss255253863 May 09, 2011 (134)
42 GMI ss282392320 May 04, 2012 (137)
43 GMI ss287014388 Apr 25, 2013 (138)
44 PJP ss291790370 May 09, 2011 (134)
45 ILLUMINA ss480964673 May 04, 2012 (137)
46 ILLUMINA ss480984685 May 04, 2012 (137)
47 ILLUMINA ss481955894 Sep 08, 2015 (146)
48 ILLUMINA ss485277258 May 04, 2012 (137)
49 EXOME_CHIP ss491500295 May 04, 2012 (137)
50 ILLUMINA ss537243617 Sep 08, 2015 (146)
51 TISHKOFF ss564699609 Apr 25, 2013 (138)
52 SSMP ss660442720 Apr 25, 2013 (138)
53 ILLUMINA ss778910319 Sep 08, 2015 (146)
54 ILLUMINA ss780685118 Sep 08, 2015 (146)
55 ILLUMINA ss783084551 Sep 08, 2015 (146)
56 ILLUMINA ss783358595 Sep 08, 2015 (146)
57 ILLUMINA ss784042109 Sep 08, 2015 (146)
58 ILLUMINA ss825515288 Jul 19, 2016 (147)
59 ILLUMINA ss832342933 Sep 08, 2015 (146)
60 ILLUMINA ss832987443 Jul 13, 2019 (153)
61 ILLUMINA ss834371661 Sep 08, 2015 (146)
62 EVA-GONL ss992157487 Aug 21, 2014 (142)
63 JMKIDD_LAB ss1080396966 Aug 21, 2014 (142)
64 1000GENOMES ss1354892556 Aug 21, 2014 (142)
65 HAMMER_LAB ss1397707750 Sep 08, 2015 (146)
66 DDI ss1427739910 Apr 01, 2015 (144)
67 EVA_GENOME_DK ss1577784017 Apr 01, 2015 (144)
68 EVA_UK10K_ALSPAC ss1633761484 Apr 01, 2015 (144)
69 EVA_UK10K_TWINSUK ss1676755517 Apr 01, 2015 (144)
70 EVA_DECODE ss1696189806 Apr 01, 2015 (144)
71 EVA_SVP ss1713517382 Apr 01, 2015 (144)
72 ILLUMINA ss1752151677 Sep 08, 2015 (146)
73 ILLUMINA ss1752151678 Sep 08, 2015 (146)
74 HAMMER_LAB ss1808364089 Sep 08, 2015 (146)
75 ILLUMINA ss1917901442 Feb 12, 2016 (147)
76 WEILL_CORNELL_DGM ss1935560200 Feb 12, 2016 (147)
77 ILLUMINA ss1946404251 Feb 12, 2016 (147)
78 ILLUMINA ss1946404252 Feb 12, 2016 (147)
79 ILLUMINA ss1959644722 Feb 12, 2016 (147)
80 ILLUMINA ss1959644723 Feb 12, 2016 (147)
81 GENOMED ss1968192459 Jul 19, 2016 (147)
82 JJLAB ss2028567287 Sep 14, 2016 (149)
83 ILLUMINA ss2094798880 Dec 20, 2016 (150)
84 ILLUMINA ss2095062053 Dec 20, 2016 (150)
85 USC_VALOUEV ss2156975350 Nov 08, 2017 (151)
86 HUMAN_LONGEVITY ss2209661057 Dec 20, 2016 (150)
87 SYSTEMSBIOZJU ss2628778497 Nov 08, 2017 (151)
88 ILLUMINA ss2633278303 Nov 08, 2017 (151)
89 ILLUMINA ss2633278304 Nov 08, 2017 (151)
90 ILLUMINA ss2633278305 Nov 08, 2017 (151)
91 GRF ss2701466386 Nov 08, 2017 (151)
92 ILLUMINA ss2710825403 Nov 08, 2017 (151)
93 GNOMAD ss2938956575 Nov 08, 2017 (151)
94 AFFY ss2985053873 Nov 08, 2017 (151)
95 AFFY ss2985693642 Nov 08, 2017 (151)
96 SWEGEN ss3013864937 Nov 08, 2017 (151)
97 ILLUMINA ss3021668460 Nov 08, 2017 (151)
98 BIOINF_KMB_FNS_UNIBA ss3028108578 Nov 08, 2017 (151)
99 CSHL ss3351276882 Nov 08, 2017 (151)
100 ILLUMINA ss3625682775 Oct 12, 2018 (152)
101 ILLUMINA ss3627448998 Oct 12, 2018 (152)
102 ILLUMINA ss3627448999 Oct 12, 2018 (152)
103 ILLUMINA ss3631268023 Oct 12, 2018 (152)
104 ILLUMINA ss3633110274 Oct 12, 2018 (152)
105 ILLUMINA ss3633815496 Oct 12, 2018 (152)
106 ILLUMINA ss3634624957 Oct 12, 2018 (152)
107 ILLUMINA ss3634624958 Oct 12, 2018 (152)
108 ILLUMINA ss3635504098 Oct 12, 2018 (152)
109 ILLUMINA ss3636315792 Oct 12, 2018 (152)
110 ILLUMINA ss3637255452 Oct 12, 2018 (152)
111 ILLUMINA ss3638106826 Oct 12, 2018 (152)
112 ILLUMINA ss3639066062 Oct 12, 2018 (152)
113 ILLUMINA ss3639538842 Oct 12, 2018 (152)
114 ILLUMINA ss3640332277 Oct 12, 2018 (152)
115 ILLUMINA ss3640332278 Oct 12, 2018 (152)
116 ILLUMINA ss3641066465 Oct 12, 2018 (152)
117 ILLUMINA ss3641361931 Oct 12, 2018 (152)
118 ILLUMINA ss3643089387 Oct 12, 2018 (152)
119 ILLUMINA ss3644657371 Oct 12, 2018 (152)
120 ILLUMINA ss3644657372 Oct 12, 2018 (152)
121 URBANLAB ss3650435513 Oct 12, 2018 (152)
122 ILLUMINA ss3652071900 Oct 12, 2018 (152)
123 ILLUMINA ss3653826069 Oct 12, 2018 (152)
124 EGCUT_WGS ss3680998197 Jul 13, 2019 (153)
125 EVA_DECODE ss3698600469 Jul 13, 2019 (153)
126 ILLUMINA ss3725531513 Jul 13, 2019 (153)
127 ACPOP ss3741232258 Jul 13, 2019 (153)
128 ILLUMINA ss3744136579 Jul 13, 2019 (153)
129 ILLUMINA ss3744425572 Jul 13, 2019 (153)
130 ILLUMINA ss3744925456 Jul 13, 2019 (153)
131 ILLUMINA ss3744925457 Jul 13, 2019 (153)
132 EVA ss3753533227 Jul 13, 2019 (153)
133 PAGE_CC ss3771856099 Jul 13, 2019 (153)
134 ILLUMINA ss3772423935 Jul 13, 2019 (153)
135 ILLUMINA ss3772423936 Jul 13, 2019 (153)
136 PACBIO ss3787947721 Jul 13, 2019 (153)
137 PACBIO ss3792944205 Jul 13, 2019 (153)
138 PACBIO ss3797828895 Jul 13, 2019 (153)
139 KHV_HUMAN_GENOMES ss3818835152 Jul 13, 2019 (153)
140 EVA ss3834414021 Apr 27, 2020 (154)
141 EVA ss3840811148 Apr 27, 2020 (154)
142 EVA ss3846301647 Apr 27, 2020 (154)
143 HGDP ss3847535801 Apr 27, 2020 (154)
144 SGDP_PRJ ss3883670953 Apr 27, 2020 (154)
145 KRGDB ss3932933996 Apr 27, 2020 (154)
146 KOGIC ss3976874413 Apr 27, 2020 (154)
147 EVA ss3984707515 Apr 26, 2021 (155)
148 EVA ss3984707516 Apr 26, 2021 (155)
149 EVA ss3985739381 Apr 26, 2021 (155)
150 EVA ss4017720849 Apr 26, 2021 (155)
151 TOPMED ss5003785271 Apr 26, 2021 (155)
152 TOMMO_GENOMICS ss5217852313 Apr 26, 2021 (155)
153 1000G_HIGH_COVERAGE ss5299700343 Oct 16, 2022 (156)
154 EVA ss5315814102 Oct 16, 2022 (156)
155 EVA ss5421533928 Oct 16, 2022 (156)
156 HUGCELL_USP ss5493287475 Oct 16, 2022 (156)
157 EVA ss5511536959 Oct 16, 2022 (156)
158 1000G_HIGH_COVERAGE ss5601727803 Oct 16, 2022 (156)
159 SANFORD_IMAGENETICS ss5624371187 Oct 16, 2022 (156)
160 SANFORD_IMAGENETICS ss5658220481 Oct 16, 2022 (156)
161 TOMMO_GENOMICS ss5772155200 Oct 16, 2022 (156)
162 EVA ss5799948954 Oct 16, 2022 (156)
163 YY_MCH ss5815649778 Oct 16, 2022 (156)
164 EVA ss5828688533 Oct 16, 2022 (156)
165 EVA ss5847456223 Oct 16, 2022 (156)
166 EVA ss5847757345 Oct 16, 2022 (156)
167 EVA ss5851441054 Oct 16, 2022 (156)
168 EVA ss5877315541 Oct 16, 2022 (156)
169 EVA ss5949650060 Oct 16, 2022 (156)
170 EVA ss5979473856 Oct 16, 2022 (156)
171 1000Genomes NC_000015.9 - 100786271 Oct 12, 2018 (152)
172 1000Genomes_30x NC_000015.10 - 100246066 Oct 16, 2022 (156)
173 The Avon Longitudinal Study of Parents and Children NC_000015.9 - 100786271 Oct 12, 2018 (152)
174 Genome-wide autozygosity in Daghestan NC_000015.8 - 98603794 Apr 27, 2020 (154)
175 Genetic variation in the Estonian population NC_000015.9 - 100786271 Oct 12, 2018 (152)
176 The Danish reference pan genome NC_000015.9 - 100786271 Apr 27, 2020 (154)
177 gnomAD - Genomes NC_000015.10 - 100246066 Apr 26, 2021 (155)
178 Genome of the Netherlands Release 5 NC_000015.9 - 100786271 Apr 27, 2020 (154)
179 HGDP-CEPH-db Supplement 1 NC_000015.8 - 98603794 Apr 27, 2020 (154)
180 KOREAN population from KRGDB NC_000015.9 - 100786271 Apr 27, 2020 (154)
181 Korean Genome Project NC_000015.10 - 100246066 Apr 27, 2020 (154)
182 Northern Sweden NC_000015.9 - 100786271 Jul 13, 2019 (153)
183 The PAGE Study NC_000015.10 - 100246066 Jul 13, 2019 (153)
184 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000015.9 - 100786271 Apr 26, 2021 (155)
185 CNV burdens in cranial meningiomas

Submission ignored due to conflicting rows:
Row 257044 (NC_000015.9:100786270:A:G 629/784)
Row 257045 (NC_000015.9:100786270:A:G 632/788)

- Apr 26, 2021 (155)
186 CNV burdens in cranial meningiomas

Submission ignored due to conflicting rows:
Row 257044 (NC_000015.9:100786270:A:G 629/784)
Row 257045 (NC_000015.9:100786270:A:G 632/788)

- Apr 26, 2021 (155)
187 Qatari NC_000015.9 - 100786271 Apr 27, 2020 (154)
188 SGDP_PRJ NC_000015.9 - 100786271 Apr 27, 2020 (154)
189 Siberian NC_000015.9 - 100786271 Apr 27, 2020 (154)
190 8.3KJPN NC_000015.9 - 100786271 Apr 26, 2021 (155)
191 14KJPN NC_000015.10 - 100246066 Oct 16, 2022 (156)
192 TopMed NC_000015.10 - 100246066 Apr 26, 2021 (155)
193 UK 10K study - Twins NC_000015.9 - 100786271 Oct 12, 2018 (152)
194 A Vietnamese Genetic Variation Database NC_000015.9 - 100786271 Jul 13, 2019 (153)
195 ALFA NC_000015.10 - 100246066 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs57875336 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
6217416775 NC_000015.10:100246065:A:C NC_000015.10:100246065:A:C (self)
177822, 213693, ss90277533, ss109097840, ss118359592, ss168590924, ss171620615, ss201278231, ss207215311, ss211665032, ss255253863, ss282392320, ss287014388, ss291790370, ss480964673, ss825515288, ss1397707750, ss1696189806, ss1713517382, ss3639066062, ss3639538842, ss3643089387, ss3847535801 NC_000015.8:98603793:A:G NC_000015.10:100246065:A:G (self)
68015292, 37776126, 26736445, 4001743, 16854780, 40111390, 14517123, 965308, 17602122, 35687933, 9491704, 75821620, 37776126, 8397433, ss227077492, ss236907834, ss243270726, ss480984685, ss481955894, ss485277258, ss491500295, ss537243617, ss564699609, ss660442720, ss778910319, ss780685118, ss783084551, ss783358595, ss784042109, ss832342933, ss832987443, ss834371661, ss992157487, ss1080396966, ss1354892556, ss1427739910, ss1577784017, ss1633761484, ss1676755517, ss1752151677, ss1752151678, ss1808364089, ss1917901442, ss1935560200, ss1946404251, ss1946404252, ss1959644722, ss1959644723, ss1968192459, ss2028567287, ss2094798880, ss2095062053, ss2156975350, ss2628778497, ss2633278303, ss2633278304, ss2633278305, ss2701466386, ss2710825403, ss2938956575, ss2985053873, ss2985693642, ss3013864937, ss3021668460, ss3351276882, ss3625682775, ss3627448998, ss3627448999, ss3631268023, ss3633110274, ss3633815496, ss3634624957, ss3634624958, ss3635504098, ss3636315792, ss3637255452, ss3638106826, ss3640332277, ss3640332278, ss3641066465, ss3641361931, ss3644657371, ss3644657372, ss3652071900, ss3653826069, ss3680998197, ss3741232258, ss3744136579, ss3744425572, ss3744925456, ss3744925457, ss3753533227, ss3772423935, ss3772423936, ss3787947721, ss3792944205, ss3797828895, ss3834414021, ss3840811148, ss3883670953, ss3932933996, ss3984707515, ss3984707516, ss3985739381, ss4017720849, ss5217852313, ss5315814102, ss5421533928, ss5511536959, ss5624371187, ss5658220481, ss5799948954, ss5828688533, ss5847456223, ss5847757345, ss5949650060, ss5979473856 NC_000015.9:100786270:A:G NC_000015.10:100246065:A:G (self)
89253738, 479415285, 33252414, 1077568, 105992304, 219330931, 6217416775, ss2209661057, ss3028108578, ss3650435513, ss3698600469, ss3725531513, ss3771856099, ss3818835152, ss3846301647, ss3976874413, ss5003785271, ss5299700343, ss5493287475, ss5601727803, ss5772155200, ss5815649778, ss5851441054, ss5877315541 NC_000015.10:100246065:A:G NC_000015.10:100246065:A:G (self)
ss6117106, ss23750178, ss43776823, ss66327478, ss66587206, ss67343769, ss67738108, ss69188141, ss70808398, ss71388275, ss74936861, ss76021681, ss79184770, ss84286246, ss96840381, ss106452082, ss122326042, ss136529427, ss136807031, ss154299120, ss156944486, ss159475983, ss160685433, ss170520405, ss171817253, ss173748634 NT_010274.17:15751797:A:G NC_000015.10:100246065:A:G (self)
ss19331262, ss20012640, ss21289074 NT_035325.5:2228007:A:G NC_000015.10:100246065:A:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

6 citations for rs4533267
PMID Title Author Year Journal
19030899 Genome-wide association scan for stature in Chinese: evidence for ethnic specific loci. Lei SF et al. 2009 Human genetics
19197348 Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae. Lowe JK et al. 2009 PLoS genetics
20017971 Assessing the impact of global versus local ancestry in association studies. Kang SJ et al. 2009 BMC proceedings
20397748 Genome-wide association study of height and body mass index in Australian twin families. Liu JZ et al. 2010 Twin research and human genetics
20546612 The role of height-associated loci identified in genome wide association studies in the determination of pediatric stature. Zhao J et al. 2010 BMC medical genetics
20966902 Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. Croteau-Chonka DC et al. 2011 Obesity (Silver Spring, Md.)
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07