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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs397509179

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr17:43076516 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delT
Variation Type
Deletion
Frequency
None
Clinical Significance
Reported in ClinVar
Gene : Consequence
BRCA1 : Frameshift Variant
Publications
1 citation
Genomic View
See rs on genome
Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

None
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 17 NC_000017.11:g.43076516del
GRCh37.p13 chr 17 NC_000017.10:g.41228533del
BRCA1 RefSeqGene (LRG_292) NG_005905.2:g.141468del
Gene: BRCA1, BRCA1 DNA repair associated (minus strand)
Molecule type Change Amino acid[Codon] SO Term
BRCA1 transcript variant 4 NM_007298.3:c.1144del S [AGT] > V [GT] Coding Sequence Variant
breast cancer type 1 susceptibility protein isoform 4 NP_009229.2:p.Ser382fs S (Ser) > V (Val) Frameshift Variant
BRCA1 transcript variant 3 NM_007297.4:c.4315del S [AGT] > V [GT] Coding Sequence Variant
breast cancer type 1 susceptibility protein isoform 3 NP_009228.2:p.Ser1439fs S (Ser) > V (Val) Frameshift Variant
BRCA1 transcript variant 5 NM_007299.4:c.1144del S [AGT] > V [GT] Coding Sequence Variant
breast cancer type 1 susceptibility protein isoform 5 NP_009230.2:p.Ser382fs S (Ser) > V (Val) Frameshift Variant
BRCA1 transcript variant 2 NM_007300.4:c.4519del S [AGT] > V [GT] Coding Sequence Variant
breast cancer type 1 susceptibility protein isoform 2 NP_009231.2:p.Ser1507fs S (Ser) > V (Val) Frameshift Variant
BRCA1 transcript variant 1 NM_007294.4:c.4456del S [AGT] > V [GT] Coding Sequence Variant
breast cancer type 1 susceptibility protein isoform 1 NP_009225.1:p.Ser1486fs S (Ser) > V (Val) Frameshift Variant
BRCA1 transcript variant 6 NR_027676.2:n.4633del N/A Non Coding Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: delT (allele ID: 69871 )
ClinVar Accession Disease Names Clinical Significance
RCV000256861.4 Breast-ovarian cancer, familial, susceptibility to, 1 Pathogenic
RCV000496726.2 Hereditary breast ovarian cancer syndrome Pathogenic
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= delT
GRCh38.p14 chr 17 NC_000017.11:g.43076516= NC_000017.11:g.43076516del
GRCh37.p13 chr 17 NC_000017.10:g.41228533= NC_000017.10:g.41228533del
BRCA1 RefSeqGene (LRG_292) NG_005905.2:g.141468= NG_005905.2:g.141468del
BRCA1 transcript variant 2 NM_007300.4:c.4519= NM_007300.4:c.4519del
BRCA1 transcript variant 2 NM_007300.3:c.4519= NM_007300.3:c.4519del
BRCA1 transcript variant 1 NM_007294.4:c.4456= NM_007294.4:c.4456del
BRCA1 transcript variant 1 NM_007294.3:c.4456= NM_007294.3:c.4456del
BRCA1 transcript variant 3 NM_007297.4:c.4315= NM_007297.4:c.4315del
BRCA1 transcript variant 3 NM_007297.3:c.4315= NM_007297.3:c.4315del
BRCA1 transcript variant 4 NM_007298.4:c.1144= NM_007298.4:c.1144del
BRCA1 transcript variant 4 NM_007298.3:c.1144= NM_007298.3:c.1144del
BRCA1 transcript variant 5 NM_007299.4:c.1144= NM_007299.4:c.1144del
BRCA1 transcript variant 5 NM_007299.3:c.1144= NM_007299.3:c.1144del
BRCA1 transcript variant 14 NM_001407593.1:c.4456= NM_001407593.1:c.4456del
BRCA1 transcript variant 33 NM_001407621.1:c.4453= NM_001407621.1:c.4453del
BRCA1 transcript variant 22 NM_001407610.1:c.4453= NM_001407610.1:c.4453del
BRCA1 transcript variant 46 NM_001407634.1:c.4450= NM_001407634.1:c.4450del
BRCA1 transcript variant 105 NM_001407697.1:c.4315= NM_001407697.1:c.4315del
BRCA1 transcript variant 124 NM_001407741.1:c.4312= NM_001407741.1:c.4312del
BRCA1 transcript variant 107 NM_001407724.1:c.4315= NM_001407724.1:c.4315del
BRCA1 transcript variant 136 NM_001407838.1:c.4309= NM_001407838.1:c.4309del
BRCA1 transcript variant 9 NM_001407583.1:c.4519= NM_001407583.1:c.4519del
BRCA1 transcript variant 13 NM_001407591.1:c.4516= NM_001407591.1:c.4516del
BRCA1 transcript variant 15 NM_001407594.1:c.4456= NM_001407594.1:c.4456del
BRCA1 transcript variant 37 NM_001407625.1:c.4453= NM_001407625.1:c.4453del
BRCA1 transcript variant 31 NM_001407619.1:c.4453= NM_001407619.1:c.4453del
BRCA1 transcript variant 27 NM_001407615.1:c.4453= NM_001407615.1:c.4453del
BRCA1 transcript variant 54 NM_001407642.1:c.4450= NM_001407642.1:c.4450del
BRCA1 transcript variant 45 NM_001407633.1:c.4450= NM_001407633.1:c.4450del
BRCA1 transcript variant 42 NM_001407630.1:c.4450= NM_001407630.1:c.4450del
BRCA1 transcript variant 21 NM_001407605.1:c.4456= NM_001407605.1:c.4456del
BRCA1 transcript variant 35 NM_001407623.1:c.4453= NM_001407623.1:c.4453del
BRCA1 transcript variant 162 NM_001407882.1:c.4246= NM_001407882.1:c.4246del
BRCA1 transcript variant 179 NM_001407908.1:c.4243= NM_001407908.1:c.4243del
BRCA1 transcript variant 171 NM_001407897.1:c.4243= NM_001407897.1:c.4243del
BRCA1 transcript variant 64 NM_001407655.1:c.4378= NM_001407655.1:c.4378del
BRCA1 transcript variant 175 NM_001407902.1:c.4243= NM_001407902.1:c.4243del
BRCA1 transcript variant 78 NM_001407669.1:c.4333= NM_001407669.1:c.4333del
BRCA1 transcript variant 86 NM_001407677.1:c.4330= NM_001407677.1:c.4330del
BRCA1 transcript variant 83 NM_001407674.1:c.4330= NM_001407674.1:c.4330del
BRCA1 transcript variant 82 NM_001407673.1:c.4330= NM_001407673.1:c.4330del
BRCA1 transcript variant 96 NM_001407687.1:c.4327= NM_001407687.1:c.4327del
BRCA1 transcript variant 93 NM_001407684.1:c.4456= NM_001407684.1:c.4456del
BRCA1 transcript variant 92 NM_001407683.1:c.4327= NM_001407683.1:c.4327del
BRCA1 transcript variant 99 NM_001407690.1:c.4324= NM_001407690.1:c.4324del
BRCA1 transcript variant 214 NM_001407947.1:c.4123= NM_001407947.1:c.4123del
BRCA1 transcript variant 223 NM_001407956.1:c.4117= NM_001407956.1:c.4117del
BRCA1 transcript variant 204 NM_001407937.1:c.4333= NM_001407937.1:c.4333del
BRCA1 transcript variant 206 NM_001407939.1:c.4330= NM_001407939.1:c.4330del
BRCA1 transcript variant 208 NM_001407941.1:c.4327= NM_001407941.1:c.4327del
BRCA1 transcript variant 110 NM_001407727.1:c.4315= NM_001407727.1:c.4315del
BRCA1 transcript variant 186 NM_001407919.1:c.4333= NM_001407919.1:c.4333del
BRCA1 transcript variant 104 NM_001407696.1:c.4315= NM_001407696.1:c.4315del
BRCA1 transcript variant 184 NM_001407917.1:c.4240= NM_001407917.1:c.4240del
BRCA1 transcript variant 16 NM_001407596.1:c.4456= NM_001407596.1:c.4456del
BRCA1 transcript variant 8 NM_001407582.1:c.4522= NM_001407582.1:c.4522del
BRCA1 transcript variant 143 NM_001407846.1:c.4309= NM_001407846.1:c.4309del
BRCA1 transcript variant 108 NM_001407725.1:c.4315= NM_001407725.1:c.4315del
BRCA1 transcript variant 123 NM_001407740.1:c.4312= NM_001407740.1:c.4312del
BRCA1 transcript variant 122 NM_001407739.1:c.4312= NM_001407739.1:c.4312del
BRCA1 transcript variant 102 NM_001407694.1:c.4315= NM_001407694.1:c.4315del
BRCA1 transcript variant 103 NM_001407695.1:c.4315= NM_001407695.1:c.4315del
BRCA1 transcript variant 144 NM_001407847.1:c.4309= NM_001407847.1:c.4309del
BRCA1 transcript variant 116 NM_001407733.1:c.4312= NM_001407733.1:c.4312del
BRCA1 transcript variant 113 NM_001407730.1:c.4315= NM_001407730.1:c.4315del
BRCA1 transcript variant 140 NM_001407843.1:c.4309= NM_001407843.1:c.4309del
BRCA1 transcript variant 135 NM_001407752.1:c.4312= NM_001407752.1:c.4312del
BRCA1 transcript variant 131 NM_001407748.1:c.4312= NM_001407748.1:c.4312del
BRCA1 transcript variant 117 NM_001407734.1:c.4312= NM_001407734.1:c.4312del
BRCA1 transcript variant 114 NM_001407731.1:c.4315= NM_001407731.1:c.4315del
BRCA1 transcript variant 147 NM_001407850.1:c.4309= NM_001407850.1:c.4309del
BRCA1 transcript variant 132 NM_001407749.1:c.4312= NM_001407749.1:c.4312del
BRCA1 transcript variant 139 NM_001407842.1:c.4309= NM_001407842.1:c.4309del
BRCA1 transcript variant 17 NM_001407597.1:c.4456= NM_001407597.1:c.4456del
BRCA1 transcript variant 167 NM_001407889.1:c.4246= NM_001407889.1:c.4246del
BRCA1 transcript variant 32 NM_001407620.1:c.4453= NM_001407620.1:c.4453del
BRCA1 transcript variant 24 NM_001407612.1:c.4453= NM_001407612.1:c.4453del
BRCA1 transcript variant 51 NM_001407639.1:c.4450= NM_001407639.1:c.4450del
BRCA1 transcript variant 48 NM_001407636.1:c.4450= NM_001407636.1:c.4450del
BRCA1 transcript variant 41 NM_001407629.1:c.4450= NM_001407629.1:c.4450del
BRCA1 transcript variant 174 NM_001407900.1:c.4243= NM_001407900.1:c.4243del
BRCA1 transcript variant 138 NM_001407841.1:c.4309= NM_001407841.1:c.4309del
BRCA1 transcript variant 160 NM_001407879.1:c.4246= NM_001407879.1:c.4246del
BRCA1 transcript variant 7 NM_001407581.1:c.4522= NM_001407581.1:c.4522del
BRCA1 transcript variant 178 NM_001407907.1:c.4243= NM_001407907.1:c.4243del
BRCA1 transcript variant 6 NM_001407571.1:c.4243= NM_001407571.1:c.4243del
BRCA1 transcript variant 134 NM_001407751.1:c.4312= NM_001407751.1:c.4312del
BRCA1 transcript variant 12 NM_001407590.1:c.4516= NM_001407590.1:c.4516del
BRCA1 transcript variant 109 NM_001407726.1:c.4315= NM_001407726.1:c.4315del
BRCA1 transcript variant 11 NM_001407587.1:c.4519= NM_001407587.1:c.4519del
BRCA1 transcript variant 10 NM_001407585.1:c.4519= NM_001407585.1:c.4519del
BRCA1 transcript variant 209 NM_001407942.1:c.4315= NM_001407942.1:c.4315del
BRCA1 transcript variant 150 NM_001407853.1:c.4309= NM_001407853.1:c.4309del
BRCA1 transcript variant 211 NM_001407944.1:c.4312= NM_001407944.1:c.4312del
BRCA1 transcript variant 210 NM_001407943.1:c.4312= NM_001407943.1:c.4312del
BRCA1 transcript variant 187 NM_001407920.1:c.4192= NM_001407920.1:c.4192del
BRCA1 transcript variant 153 NM_001407859.1:c.4453= NM_001407859.1:c.4453del
BRCA1 transcript variant 129 NM_001407746.1:c.4312= NM_001407746.1:c.4312del
BRCA1 transcript variant 36 NM_001407624.1:c.4453= NM_001407624.1:c.4453del
BRCA1 transcript variant 28 NM_001407616.1:c.4453= NM_001407616.1:c.4453del
BRCA1 transcript variant 23 NM_001407611.1:c.4453= NM_001407611.1:c.4453del
BRCA1 transcript variant 190 NM_001407923.1:c.4192= NM_001407923.1:c.4192del
BRCA1 transcript variant 53 NM_001407641.1:c.4450= NM_001407641.1:c.4450del
BRCA1 transcript variant 49 NM_001407637.1:c.4450= NM_001407637.1:c.4450del
BRCA1 transcript variant 40 NM_001407628.1:c.4450= NM_001407628.1:c.4450del
BRCA1 transcript variant 18 NM_001407598.1:c.4456= NM_001407598.1:c.4456del
BRCA1 transcript variant 200 NM_001407933.1:c.4189= NM_001407933.1:c.4189del
BRCA1 transcript variant 194 NM_001407927.1:c.4189= NM_001407927.1:c.4189del
BRCA1 transcript variant 56 NM_001407645.1:c.4447= NM_001407645.1:c.4447del
BRCA1 transcript variant 38 NM_001407626.1:c.4453= NM_001407626.1:c.4453del
BRCA1 transcript variant 29 NM_001407617.1:c.4453= NM_001407617.1:c.4453del
BRCA1 transcript variant 26 NM_001407614.1:c.4453= NM_001407614.1:c.4453del
BRCA1 transcript variant 197 NM_001407930.1:c.4189= NM_001407930.1:c.4189del
BRCA1 transcript variant 188 NM_001407921.1:c.4192= NM_001407921.1:c.4192del
BRCA1 transcript variant 201 NM_001407934.1:c.4186= NM_001407934.1:c.4186del
BRCA1 transcript variant 57 NM_001407646.1:c.4444= NM_001407646.1:c.4444del
BRCA1 transcript variant 52 NM_001407640.1:c.4450= NM_001407640.1:c.4450del
BRCA1 transcript variant 47 NM_001407635.1:c.4450= NM_001407635.1:c.4450del
BRCA1 transcript variant 39 NM_001407627.1:c.4450= NM_001407627.1:c.4450del
BRCA1 transcript variant 19 NM_001407602.1:c.4456= NM_001407602.1:c.4456del
BRCA1 transcript variant 55 NM_001407644.1:c.4447= NM_001407644.1:c.4447del
BRCA1 transcript variant 34 NM_001407622.1:c.4453= NM_001407622.1:c.4453del
BRCA1 transcript variant 50 NM_001407638.1:c.4450= NM_001407638.1:c.4450del
BRCA1 transcript variant 43 NM_001407631.1:c.4450= NM_001407631.1:c.4450del
BRCA1 transcript variant 20 NM_001407603.1:c.4456= NM_001407603.1:c.4456del
BRCA1 transcript variant 58 NM_001407647.1:c.4441= NM_001407647.1:c.4441del
BRCA1 transcript variant 163 NM_001407884.1:c.4246= NM_001407884.1:c.4246del
BRCA1 transcript variant 30 NM_001407618.1:c.4453= NM_001407618.1:c.4453del
BRCA1 transcript variant 25 NM_001407613.1:c.4453= NM_001407613.1:c.4453del
BRCA1 transcript variant 181 NM_001407910.1:c.4243= NM_001407910.1:c.4243del
BRCA1 transcript variant 176 NM_001407904.1:c.4243= NM_001407904.1:c.4243del
BRCA1 transcript variant 169 NM_001407895.1:c.4243= NM_001407895.1:c.4243del
BRCA1 transcript variant 44 NM_001407632.1:c.4450= NM_001407632.1:c.4450del
BRCA1 transcript variant 183 NM_001407916.1:c.4240= NM_001407916.1:c.4240del
BRCA1 transcript variant 182 NM_001407915.1:c.4240= NM_001407915.1:c.4240del
BRCA1 transcript variant 166 NM_001407887.1:c.4246= NM_001407887.1:c.4246del
BRCA1 transcript variant 221 NM_001407954.1:c.4120= NM_001407954.1:c.4120del
BRCA1 transcript variant 180 NM_001407909.1:c.4243= NM_001407909.1:c.4243del
BRCA1 transcript variant 177 NM_001407906.1:c.4243= NM_001407906.1:c.4243del
BRCA1 transcript variant 168 NM_001407894.1:c.4243= NM_001407894.1:c.4243del
BRCA1 transcript variant 185 NM_001407918.1:c.4240= NM_001407918.1:c.4240del
BRCA1 transcript variant 75 NM_001407666.1:c.4333= NM_001407666.1:c.4333del
BRCA1 transcript variant 170 NM_001407896.1:c.4243= NM_001407896.1:c.4243del
BRCA1 transcript variant 87 NM_001407678.1:c.4330= NM_001407678.1:c.4330del
BRCA1 transcript variant 81 NM_001407672.1:c.4330= NM_001407672.1:c.4330del
BRCA1 transcript variant 173 NM_001407899.1:c.4243= NM_001407899.1:c.4243del
BRCA1 transcript variant 165 NM_001407886.1:c.4246= NM_001407886.1:c.4246del
BRCA1 transcript variant 106 NM_001407698.1:c.4315= NM_001407698.1:c.4315del
BRCA1 transcript variant 215 NM_001407948.1:c.4123= NM_001407948.1:c.4123del
BRCA1 transcript variant 133 NM_001407750.1:c.4312= NM_001407750.1:c.4312del
BRCA1 transcript variant 127 NM_001407744.1:c.4312= NM_001407744.1:c.4312del
BRCA1 transcript variant 115 NM_001407732.1:c.4312= NM_001407732.1:c.4312del
BRCA1 transcript variant 59 NM_001407648.1:c.4399= NM_001407648.1:c.4399del
BRCA1 transcript variant 217 NM_001407950.1:c.4120= NM_001407950.1:c.4120del
BRCA1 transcript variant 149 NM_001407852.1:c.4309= NM_001407852.1:c.4309del
BRCA1 transcript variant 146 NM_001407849.1:c.4309= NM_001407849.1:c.4309del
BRCA1 transcript variant 142 NM_001407845.1:c.4309= NM_001407845.1:c.4309del
BRCA1 transcript variant 125 NM_001407742.1:c.4312= NM_001407742.1:c.4312del
BRCA1 transcript variant 119 NM_001407736.1:c.4312= NM_001407736.1:c.4312del
BRCA1 transcript variant 60 NM_001407649.1:c.4396= NM_001407649.1:c.4396del
BRCA1 transcript variant 219 NM_001407952.1:c.4120= NM_001407952.1:c.4120del
BRCA1 transcript variant 121 NM_001407738.1:c.4312= NM_001407738.1:c.4312del
BRCA1 transcript variant 154 NM_001407860.1:c.4453= NM_001407860.1:c.4453del
BRCA1 transcript variant 152 NM_001407858.1:c.4453= NM_001407858.1:c.4453del
BRCA1 transcript variant 62 NM_001407653.1:c.4378= NM_001407653.1:c.4378del
BRCA1 transcript variant 151 NM_001407854.1:c.4456= NM_001407854.1:c.4456del
BRCA1 transcript variant 67 NM_001407658.1:c.4375= NM_001407658.1:c.4375del
BRCA1 transcript variant 161 NM_001407881.1:c.4246= NM_001407881.1:c.4246del
BRCA1 transcript variant 72 NM_001407663.1:c.4372= NM_001407663.1:c.4372del
BRCA1 transcript variant 70 NM_001407661.1:c.4372= NM_001407661.1:c.4372del
BRCA1 transcript variant 69 NM_001407660.1:c.4372= NM_001407660.1:c.4372del
BRCA1 transcript variant 63 NM_001407654.1:c.4378= NM_001407654.1:c.4378del
BRCA1 transcript variant 61 NM_001407652.1:c.4456= NM_001407652.1:c.4456del
BRCA1 transcript variant 172 NM_001407898.1:c.4243= NM_001407898.1:c.4243del
BRCA1 transcript variant 155 NM_001407861.1:c.4450= NM_001407861.1:c.4450del
BRCA1 transcript variant 66 NM_001407657.1:c.4375= NM_001407657.1:c.4375del
BRCA1 transcript variant 65 NM_001407656.1:c.4375= NM_001407656.1:c.4375del
BRCA1 transcript variant 231 NM_001407965.1:c.3949= NM_001407965.1:c.3949del
BRCA1 transcript variant 71 NM_001407662.1:c.4372= NM_001407662.1:c.4372del
BRCA1 transcript variant 68 NM_001407659.1:c.4372= NM_001407659.1:c.4372del
BRCA1 transcript variant 112 NM_001407729.1:c.4315= NM_001407729.1:c.4315del
BRCA1 transcript variant 126 NM_001407743.1:c.4312= NM_001407743.1:c.4312del
BRCA1 transcript variant 118 NM_001407735.1:c.4312= NM_001407735.1:c.4312del
BRCA1 transcript variant 148 NM_001407851.1:c.4309= NM_001407851.1:c.4309del
BRCA1 transcript variant 141 NM_001407844.1:c.4309= NM_001407844.1:c.4309del
BRCA1 transcript variant 111 NM_001407728.1:c.4315= NM_001407728.1:c.4315del
BRCA1 transcript variant 128 NM_001407745.1:c.4312= NM_001407745.1:c.4312del
BRCA1 transcript variant 120 NM_001407737.1:c.4312= NM_001407737.1:c.4312del
BRCA1 transcript variant 145 NM_001407848.1:c.4309= NM_001407848.1:c.4309del
BRCA1 transcript variant 137 NM_001407839.1:c.4309= NM_001407839.1:c.4309del
BRCA1 transcript variant 158 NM_001407874.1:c.4249= NM_001407874.1:c.4249del
BRCA1 transcript variant 73 NM_001407664.1:c.4333= NM_001407664.1:c.4333del
BRCA1 transcript variant 89 NM_001407680.1:c.4330= NM_001407680.1:c.4330del
BRCA1 transcript variant 84 NM_001407675.1:c.4330= NM_001407675.1:c.4330del
BRCA1 transcript variant 79 NM_001407670.1:c.4330= NM_001407670.1:c.4330del
BRCA1 transcript variant 164 NM_001407885.1:c.4246= NM_001407885.1:c.4246del
BRCA1 transcript variant 98 NM_001407689.1:c.4327= NM_001407689.1:c.4327del
BRCA1 transcript variant 90 NM_001407681.1:c.4327= NM_001407681.1:c.4327del
BRCA1 transcript variant 76 NM_001407667.1:c.4333= NM_001407667.1:c.4333del
BRCA1 transcript variant 88 NM_001407679.1:c.4330= NM_001407679.1:c.4330del
BRCA1 transcript variant 85 NM_001407676.1:c.4330= NM_001407676.1:c.4330del
BRCA1 transcript variant 80 NM_001407671.1:c.4330= NM_001407671.1:c.4330del
BRCA1 transcript variant 97 NM_001407688.1:c.4327= NM_001407688.1:c.4327del
BRCA1 transcript variant 94 NM_001407685.1:c.4327= NM_001407685.1:c.4327del
BRCA1 transcript variant 91 NM_001407682.1:c.4327= NM_001407682.1:c.4327del
BRCA1 transcript variant 77 NM_001407668.1:c.4333= NM_001407668.1:c.4333del
BRCA1 transcript variant 212 NM_001407945.1:c.4312= NM_001407945.1:c.4312del
BRCA1 transcript variant 100 NM_001407691.1:c.4324= NM_001407691.1:c.4324del
BRCA1 transcript variant 74 NM_001407665.1:c.4333= NM_001407665.1:c.4333del
BRCA1 transcript variant 213 NM_001407946.1:c.4123= NM_001407946.1:c.4123del
BRCA1 transcript variant 222 NM_001407955.1:c.4120= NM_001407955.1:c.4120del
BRCA1 transcript variant 218 NM_001407951.1:c.4120= NM_001407951.1:c.4120del
BRCA1 transcript variant 95 NM_001407686.1:c.4327= NM_001407686.1:c.4327del
BRCA1 transcript variant 225 NM_001407958.1:c.4117= NM_001407958.1:c.4117del
BRCA1 transcript variant 216 NM_001407949.1:c.4123= NM_001407949.1:c.4123del
BRCA1 transcript variant 101 NM_001407692.1:c.4315= NM_001407692.1:c.4315del
BRCA1 transcript variant 220 NM_001407953.1:c.4120= NM_001407953.1:c.4120del
BRCA1 transcript variant 224 NM_001407957.1:c.4117= NM_001407957.1:c.4117del
BRCA1 transcript variant 130 NM_001407747.1:c.4312= NM_001407747.1:c.4312del
BRCA1 transcript variant 191 NM_001407924.1:c.4192= NM_001407924.1:c.4192del
BRCA1 transcript variant 227 NM_001407960.1:c.4072= NM_001407960.1:c.4072del
BRCA1 transcript variant 196 NM_001407929.1:c.4189= NM_001407929.1:c.4189del
BRCA1 transcript variant 203 NM_001407936.1:c.4186= NM_001407936.1:c.4186del
BRCA1 transcript variant 192 NM_001407925.1:c.4192= NM_001407925.1:c.4192del
BRCA1 transcript variant 228 NM_001407962.1:c.4072= NM_001407962.1:c.4072del
BRCA1 transcript variant 199 NM_001407932.1:c.4189= NM_001407932.1:c.4189del
BRCA1 transcript variant 195 NM_001407928.1:c.4189= NM_001407928.1:c.4189del
BRCA1 transcript variant 156 NM_001407862.1:c.4255= NM_001407862.1:c.4255del
BRCA1 transcript variant 205 NM_001407938.1:c.4333= NM_001407938.1:c.4333del
BRCA1 transcript variant 207 NM_001407940.1:c.4330= NM_001407940.1:c.4330del
BRCA1 transcript variant 157 NM_001407863.1:c.4330= NM_001407863.1:c.4330del
BRCA1 transcript variant 159 NM_001407875.1:c.4249= NM_001407875.1:c.4249del
BRCA1 transcript variant 193 NM_001407926.1:c.4192= NM_001407926.1:c.4192del
BRCA1 transcript variant 202 NM_001407935.1:c.4186= NM_001407935.1:c.4186del
BRCA1 transcript variant 189 NM_001407922.1:c.4192= NM_001407922.1:c.4192del
BRCA1 transcript variant 229 NM_001407963.1:c.4069= NM_001407963.1:c.4069del
BRCA1 transcript variant 226 NM_001407959.1:c.4075= NM_001407959.1:c.4075del
BRCA1 transcript variant 198 NM_001407931.1:c.4189= NM_001407931.1:c.4189del
BRCA1 transcript variant 232 NM_001407966.1:c.3568= NM_001407966.1:c.3568del
BRCA1 transcript variant 233 NM_001407967.1:c.3565= NM_001407967.1:c.3565del
BRCA1 transcript variant 236 NM_001407970.1:c.1213= NM_001407970.1:c.1213del
BRCA1 transcript variant 248 NM_001407982.1:c.1144= NM_001407982.1:c.1144del
BRCA1 transcript variant 340 NM_001408483.1:c.934= NM_001408483.1:c.934del
BRCA1 transcript variant 275 NM_001408415.1:c.1066= NM_001408415.1:c.1066del
BRCA1 transcript variant 286 NM_001408426.1:c.1024= NM_001408426.1:c.1024del
BRCA1 transcript variant 302 NM_001408442.1:c.1021= NM_001408442.1:c.1021del
BRCA1 transcript variant 271 NM_001408410.1:c.1072= NM_001408410.1:c.1072del
BRCA1 transcript variant 234 NM_001407968.1:c.1852= NM_001407968.1:c.1852del
BRCA1 transcript variant 235 NM_001407969.1:c.1849= NM_001407969.1:c.1849del
BRCA1 transcript variant 238 NM_001407972.1:c.1210= NM_001407972.1:c.1210del
BRCA1 transcript variant 243 NM_001407977.1:c.1147= NM_001407977.1:c.1147del
BRCA1 transcript variant 253 NM_001407986.1:c.1144= NM_001407986.1:c.1144del
BRCA1 transcript variant 245 NM_001407979.1:c.1144= NM_001407979.1:c.1144del
BRCA1 transcript variant 262 NM_001408400.1:c.1141= NM_001408400.1:c.1141del
BRCA1 transcript variant 257 NM_001408392.1:c.1141= NM_001408392.1:c.1141del
BRCA1 transcript variant 342 NM_001408485.1:c.934= NM_001408485.1:c.934del
BRCA1 transcript variant 272 NM_001408411.1:c.1069= NM_001408411.1:c.1069del
BRCA1 transcript variant 274 NM_001408414.1:c.1066= NM_001408414.1:c.1066del
BRCA1 transcript variant 289 NM_001408429.1:c.1024= NM_001408429.1:c.1024del
BRCA1 transcript variant 301 NM_001408441.1:c.1021= NM_001408441.1:c.1021del
BRCA1 transcript variant 297 NM_001408437.1:c.1021= NM_001408437.1:c.1021del
BRCA1 transcript variant 293 NM_001408433.1:c.1021= NM_001408433.1:c.1021del
BRCA1 transcript variant 307 NM_001408447.1:c.1018= NM_001408447.1:c.1018del
BRCA1 transcript variant 321 NM_001408462.1:c.1003= NM_001408462.1:c.1003del
BRCA1 transcript variant 239 NM_001407973.1:c.1147= NM_001407973.1:c.1147del
BRCA1 transcript variant 339 NM_001408482.1:c.934= NM_001408482.1:c.934del
BRCA1 transcript variant 324 NM_001408465.1:c.1003= NM_001408465.1:c.1003del
BRCA1 transcript variant 322 NM_001408463.1:c.1003= NM_001408463.1:c.1003del
BRCA1 transcript variant 315 NM_001408456.1:c.1006= NM_001408456.1:c.1006del
BRCA1 transcript variant 311 NM_001408452.1:c.1006= NM_001408452.1:c.1006del
BRCA1 transcript variant 325 NM_001408466.1:c.1003= NM_001408466.1:c.1003del
BRCA1 transcript variant 314 NM_001408455.1:c.1006= NM_001408455.1:c.1006del
BRCA1 transcript variant 327 NM_001408468.1:c.1000= NM_001408468.1:c.1000del
BRCA1 transcript variant 244 NM_001407978.1:c.1147= NM_001407978.1:c.1147del
BRCA1 transcript variant 255 NM_001407992.1:c.1144= NM_001407992.1:c.1144del
BRCA1 transcript variant 247 NM_001407981.1:c.1144= NM_001407981.1:c.1144del
BRCA1 transcript variant 260 NM_001408398.1:c.1141= NM_001408398.1:c.1141del
BRCA1 transcript variant 346 NM_001408492.1:c.931= NM_001408492.1:c.931del
BRCA1 transcript variant 335 NM_001408478.1:c.937= NM_001408478.1:c.937del
BRCA1 transcript variant 237 NM_001407971.1:c.1213= NM_001407971.1:c.1213del
BRCA1 transcript variant 341 NM_001408484.1:c.934= NM_001408484.1:c.934del
BRCA1 transcript variant 283 NM_001408422.1:c.1027= NM_001408422.1:c.1027del
BRCA1 transcript variant 277 NM_001408416.1:c.1066= NM_001408416.1:c.1066del
BRCA1 transcript variant 317 NM_001408458.1:c.1003= NM_001408458.1:c.1003del
BRCA1 transcript variant 241 NM_001407975.1:c.1147= NM_001407975.1:c.1147del
BRCA1 transcript variant 251 NM_001407984.1:c.1144= NM_001407984.1:c.1144del
BRCA1 transcript variant 249 NM_001407983.1:c.1144= NM_001407983.1:c.1144del
BRCA1 transcript variant 353 NM_001408499.1:c.883= NM_001408499.1:c.883del
BRCA1 transcript variant 351 NM_001408497.1:c.883= NM_001408497.1:c.883del
BRCA1 transcript variant 265 NM_001408403.1:c.1141= NM_001408403.1:c.1141del
BRCA1 transcript variant 264 NM_001408402.1:c.1141= NM_001408402.1:c.1141del
BRCA1 transcript variant 261 NM_001408399.1:c.1141= NM_001408399.1:c.1141del
BRCA1 transcript variant 240 NM_001407974.1:c.1147= NM_001407974.1:c.1147del
BRCA1 transcript variant 358 NM_001408504.1:c.880= NM_001408504.1:c.880del
BRCA1 transcript variant 268 NM_001408407.1:c.1138= NM_001408407.1:c.1138del
BRCA1 transcript variant 267 NM_001408406.1:c.1138= NM_001408406.1:c.1138del
BRCA1 transcript variant 250 NM_001407990.1:c.1144= NM_001407990.1:c.1144del
BRCA1 transcript variant 252 NM_001407985.1:c.1144= NM_001407985.1:c.1144del
BRCA1 transcript variant 354 NM_001408500.1:c.883= NM_001408500.1:c.883del
BRCA1 transcript variant 270 NM_001408409.1:c.1135= NM_001408409.1:c.1135del
BRCA1 transcript variant 266 NM_001408404.1:c.1141= NM_001408404.1:c.1141del
BRCA1 transcript variant 263 NM_001408401.1:c.1141= NM_001408401.1:c.1141del
BRCA1 transcript variant 258 NM_001408396.1:c.1141= NM_001408396.1:c.1141del
BRCA1 transcript variant 357 NM_001408503.1:c.880= NM_001408503.1:c.880del
BRCA1 transcript variant 355 NM_001408501.1:c.883= NM_001408501.1:c.883del
BRCA1 transcript variant 269 NM_001408408.1:c.1138= NM_001408408.1:c.1138del
BRCA1 transcript variant 254 NM_001407991.1:c.1144= NM_001407991.1:c.1144del
BRCA1 transcript variant 242 NM_001407976.1:c.1147= NM_001407976.1:c.1147del
BRCA1 transcript variant 336 NM_001408479.1:c.937= NM_001408479.1:c.937del
BRCA1 transcript variant 256 NM_001407993.1:c.1144= NM_001407993.1:c.1144del
BRCA1 transcript variant 246 NM_001407980.1:c.1144= NM_001407980.1:c.1144del
BRCA1 transcript variant 344 NM_001408490.1:c.934= NM_001408490.1:c.934del
BRCA1 transcript variant 343 NM_001408489.1:c.934= NM_001408489.1:c.934del
BRCA1 transcript variant 259 NM_001408397.1:c.1141= NM_001408397.1:c.1141del
BRCA1 transcript variant 347 NM_001408493.1:c.931= NM_001408493.1:c.931del
BRCA1 transcript variant 337 NM_001408480.1:c.937= NM_001408480.1:c.937del
BRCA1 transcript variant 278 NM_001408418.1:c.1030= NM_001408418.1:c.1030del
BRCA1 transcript variant 345 NM_001408491.1:c.934= NM_001408491.1:c.934del
BRCA1 transcript variant 338 NM_001408481.1:c.934= NM_001408481.1:c.934del
BRCA1 transcript variant 288 NM_001408428.1:c.1024= NM_001408428.1:c.1024del
BRCA1 transcript variant 300 NM_001408440.1:c.1021= NM_001408440.1:c.1021del
BRCA1 transcript variant 294 NM_001408434.1:c.1021= NM_001408434.1:c.1021del
BRCA1 transcript variant 309 NM_001408450.1:c.1018= NM_001408450.1:c.1018del
BRCA1 transcript variant 313 NM_001408454.1:c.1006= NM_001408454.1:c.1006del
BRCA1 transcript variant 319 NM_001408460.1:c.1003= NM_001408460.1:c.1003del
BRCA1 transcript variant 326 NM_001408467.1:c.1003= NM_001408467.1:c.1003del
BRCA1 transcript variant 323 NM_001408464.1:c.1003= NM_001408464.1:c.1003del
BRCA1 transcript variant 318 NM_001408459.1:c.1003= NM_001408459.1:c.1003del
BRCA1 transcript variant 320 NM_001408461.1:c.1003= NM_001408461.1:c.1003del
BRCA1 transcript variant 356 NM_001408502.1:c.880= NM_001408502.1:c.880del
BRCA1 transcript variant 331 NM_001408473.1:c.1141= NM_001408473.1:c.1141del
BRCA1 transcript variant 276 NM_001408413.1:c.1066= NM_001408413.1:c.1066del
BRCA1 transcript variant 330 NM_001408472.1:c.1144= NM_001408472.1:c.1144del
BRCA1 transcript variant 273 NM_001408412.1:c.1066= NM_001408412.1:c.1066del
BRCA1 transcript variant 312 NM_001408453.1:c.1006= NM_001408453.1:c.1006del
BRCA1 transcript variant 329 NM_001408470.1:c.1000= NM_001408470.1:c.1000del
BRCA1 transcript variant 328 NM_001408469.1:c.1000= NM_001408469.1:c.1000del
BRCA1 transcript variant 279 NM_001408419.1:c.1030= NM_001408419.1:c.1030del
BRCA1 transcript variant 282 NM_001408424.1:c.1027= NM_001408424.1:c.1027del
BRCA1 transcript variant 291 NM_001408431.1:c.1024= NM_001408431.1:c.1024del
BRCA1 transcript variant 285 NM_001408425.1:c.1024= NM_001408425.1:c.1024del
BRCA1 transcript variant 280 NM_001408420.1:c.1030= NM_001408420.1:c.1030del
BRCA1 transcript variant 303 NM_001408443.1:c.1021= NM_001408443.1:c.1021del
BRCA1 transcript variant 299 NM_001408439.1:c.1021= NM_001408439.1:c.1021del
BRCA1 transcript variant 292 NM_001408432.1:c.1021= NM_001408432.1:c.1021del
BRCA1 transcript variant 284 NM_001408423.1:c.1027= NM_001408423.1:c.1027del
BRCA1 transcript variant 305 NM_001408445.1:c.1018= NM_001408445.1:c.1018del
BRCA1 transcript variant 290 NM_001408430.1:c.1024= NM_001408430.1:c.1024del
BRCA1 transcript variant 304 NM_001408444.1:c.1021= NM_001408444.1:c.1021del
BRCA1 transcript variant 298 NM_001408438.1:c.1021= NM_001408438.1:c.1021del
BRCA1 transcript variant 295 NM_001408435.1:c.1021= NM_001408435.1:c.1021del
BRCA1 transcript variant 281 NM_001408421.1:c.1027= NM_001408421.1:c.1027del
BRCA1 transcript variant 306 NM_001408446.1:c.1018= NM_001408446.1:c.1018del
BRCA1 transcript variant 287 NM_001408427.1:c.1024= NM_001408427.1:c.1024del
BRCA1 transcript variant 310 NM_001408451.1:c.1012= NM_001408451.1:c.1012del
BRCA1 transcript variant 308 NM_001408448.1:c.1018= NM_001408448.1:c.1018del
BRCA1 transcript variant 360 NM_001408506.1:c.820= NM_001408506.1:c.820del
BRCA1 transcript variant 296 NM_001408436.1:c.1021= NM_001408436.1:c.1021del
BRCA1 transcript variant 316 NM_001408457.1:c.1006= NM_001408457.1:c.1006del
BRCA1 transcript variant 361 NM_001408507.1:c.817= NM_001408507.1:c.817del
BRCA1 transcript variant 362 NM_001408508.1:c.808= NM_001408508.1:c.808del
BRCA1 transcript variant 363 NM_001408509.1:c.805= NM_001408509.1:c.805del
BRCA1 transcript variant 350 NM_001408496.1:c.883= NM_001408496.1:c.883del
BRCA1 transcript variant 364 NM_001408510.1:c.766= NM_001408510.1:c.766del
BRCA1 transcript variant 352 NM_001408498.1:c.883= NM_001408498.1:c.883del
BRCA1 transcript variant 332 NM_001408474.1:c.946= NM_001408474.1:c.946del
BRCA1 transcript variant 334 NM_001408476.1:c.943= NM_001408476.1:c.943del
BRCA1 transcript variant 333 NM_001408475.1:c.943= NM_001408475.1:c.943del
BRCA1 transcript variant 359 NM_001408505.1:c.877= NM_001408505.1:c.877del
BRCA1 transcript variant 348 NM_001408494.1:c.907= NM_001408494.1:c.907del
BRCA1 transcript variant 349 NM_001408495.1:c.901= NM_001408495.1:c.901del
BRCA1 transcript variant 366 NM_001408512.1:c.643= NM_001408512.1:c.643del
BRCA1 transcript variant 365 NM_001408511.1:c.763= NM_001408511.1:c.763del
BRCA1 transcript variant BRCA1b NM_007295.2:c.4456= NM_007295.2:c.4456del
BRCA1 transcript variant BRCA1-exon4 NM_007306.2:c.*4392= NM_007306.2:c.*4392del
BRCA1 transcript variant BRCA1a' NM_007296.2:c.4456= NM_007296.2:c.4456del
BRCA1 transcript variant 6 NR_027676.2:n.4633= NR_027676.2:n.4633del
BRCA1 transcript variant BRCA1-delta9-10 NM_007302.2:c.4333= NM_007302.2:c.4333del
BRCA1 transcript variant BRCA1-delta15-17 NM_007301.2:c.4456= NM_007301.2:c.4456del
BRCA1 transcript variant BRCA1-delta11b NM_007304.2:c.1144= NM_007304.2:c.1144del
BRCA1 transcript variant BRCA1-delta11 NM_007303.2:c.1030= NM_007303.2:c.1030del
BRCA1 transcript variant BRCA1-delta9-10-11b NM_007305.2:c.1024= NM_007305.2:c.1024del
BRCA1 transcript variant BRCA1b NM_007295.1:c.4456= NM_007295.1:c.4456del
BRCA1 transcript variant BRCA1-exon4 NM_007306.1:c.*4392= NM_007306.1:c.*4392del
BRCA1 transcript variant 6 NR_027676.1:n.4592= NR_027676.1:n.4592del
BRCA1 transcript variant BRCA1a' NM_007296.1:c.4456= NM_007296.1:c.4456del
BRCA1 transcript variant BRCA1-delta9-10 NM_007302.1:c.4333= NM_007302.1:c.4333del
BRCA1 transcript variant BRCA1-delta15-17 NM_007301.1:c.4456= NM_007301.1:c.4456del
BRCA1 transcript variant BRCA1-delta11 NM_007303.1:c.1030= NM_007303.1:c.1030del
BRCA1 transcript variant BRCA1-delta9-10-11b NM_007305.1:c.1024= NM_007305.1:c.1024del
BRCA1 transcript variant BRCA1-delta11b NM_007304.1:c.1144= NM_007304.1:c.1144del
breast cancer type 1 susceptibility protein isoform 2 NP_009231.2:p.Ser1507= NP_009231.2:p.Ser1507fs
breast cancer type 1 susceptibility protein isoform 1 NP_009225.1:p.Ser1486= NP_009225.1:p.Ser1486fs
breast cancer type 1 susceptibility protein isoform 3 NP_009228.2:p.Ser1439= NP_009228.2:p.Ser1439fs
breast cancer type 1 susceptibility protein isoform 4 NP_009229.2:p.Ser382= NP_009229.2:p.Ser382fs
breast cancer type 1 susceptibility protein isoform 5 NP_009230.2:p.Ser382= NP_009230.2:p.Ser382fs
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

1 SubSNP, 2 ClinVar submissions
No Submitter Submission ID Date (Build)
1 CLINVAR ss831881315 Nov 05, 2013 (136)
2 ClinVar RCV000256861.4 Oct 17, 2022 (156)
3 ClinVar RCV000496726.2 Oct 17, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
RCV000256861.4, RCV000496726.2, ss831881315 NC_000017.11:43076515:T: NC_000017.11:43076515:T: (self)
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Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs397509179
PMID Title Author Year Journal
15340362 Penetrances of breast and ovarian cancer in a large series of families tested for BRCA1/2 mutations. Marroni F et al. 2004 European journal of human genetics
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The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07