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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3805032

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr3:4835664 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>G
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.308206 (81579/264690, TOPMED)
A=0.301599 (66663/221032, ALFA)
A=0.308669 (43210/139988, GnomAD) (+ 18 more)
A=0.20132 (5689/28258, 14KJPN)
A=0.20048 (3360/16760, 8.3KJPN)
A=0.3057 (1958/6404, 1000G_30x)
A=0.2997 (1501/5008, 1000G)
A=0.2904 (1301/4480, Estonian)
A=0.3020 (1164/3854, ALSPAC)
A=0.3018 (1119/3708, TWINSUK)
A=0.2256 (661/2930, KOREAN)
A=0.2884 (601/2084, HGDP_Stanford)
A=0.3044 (576/1892, HapMap)
A=0.333 (332/998, GoNL)
A=0.250 (150/600, NorthernSweden)
A=0.229 (110/480, SGDP_PRJ)
A=0.361 (78/216, Qatari)
A=0.310 (65/210, Vietnamese)
A=0.25 (18/72, Ancient Sardinia)
A=0.28 (15/54, Siberian)
A=0.42 (17/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
ITPR1 : Intron Variant
LOC124906209 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 221124 A=0.301632 G=0.698368
European Sub 193496 A=0.302590 G=0.697410
African Sub 7060 A=0.3435 G=0.6565
African Others Sub 264 A=0.348 G=0.652
African American Sub 6796 A=0.3433 G=0.6567
Asian Sub 738 A=0.318 G=0.682
East Asian Sub 592 A=0.301 G=0.699
Other Asian Sub 146 A=0.390 G=0.610
Latin American 1 Sub 840 A=0.324 G=0.676
Latin American 2 Sub 6876 A=0.2195 G=0.7805
South Asian Sub 5042 A=0.3062 G=0.6938
Other Sub 7072 A=0.3059 G=0.6941


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.308206 G=0.691794
Allele Frequency Aggregator Total Global 221032 A=0.301599 G=0.698401
Allele Frequency Aggregator European Sub 193422 A=0.302541 G=0.697459
Allele Frequency Aggregator African Sub 7060 A=0.3435 G=0.6565
Allele Frequency Aggregator Other Sub 7054 A=0.3062 G=0.6938
Allele Frequency Aggregator Latin American 2 Sub 6876 A=0.2195 G=0.7805
Allele Frequency Aggregator South Asian Sub 5042 A=0.3062 G=0.6938
Allele Frequency Aggregator Latin American 1 Sub 840 A=0.324 G=0.676
Allele Frequency Aggregator Asian Sub 738 A=0.318 G=0.682
gnomAD - Genomes Global Study-wide 139988 A=0.308669 G=0.691331
gnomAD - Genomes European Sub 75850 A=0.29747 G=0.70253
gnomAD - Genomes African Sub 41900 A=0.34143 G=0.65857
gnomAD - Genomes American Sub 13644 A=0.25293 G=0.74707
gnomAD - Genomes Ashkenazi Jewish Sub 3320 A=0.3877 G=0.6123
gnomAD - Genomes East Asian Sub 3128 A=0.3021 G=0.6979
gnomAD - Genomes Other Sub 2146 A=0.3066 G=0.6934
14KJPN JAPANESE Study-wide 28258 A=0.20132 G=0.79868
8.3KJPN JAPANESE Study-wide 16760 A=0.20048 G=0.79952
1000Genomes_30x Global Study-wide 6404 A=0.3057 G=0.6943
1000Genomes_30x African Sub 1786 A=0.3645 G=0.6355
1000Genomes_30x Europe Sub 1266 A=0.2773 G=0.7227
1000Genomes_30x South Asian Sub 1202 A=0.3170 G=0.6830
1000Genomes_30x East Asian Sub 1170 A=0.2769 G=0.7231
1000Genomes_30x American Sub 980 A=0.256 G=0.744
1000Genomes Global Study-wide 5008 A=0.2997 G=0.7003
1000Genomes African Sub 1322 A=0.3601 G=0.6399
1000Genomes East Asian Sub 1008 A=0.2758 G=0.7242
1000Genomes Europe Sub 1006 A=0.2704 G=0.7296
1000Genomes South Asian Sub 978 A=0.310 G=0.690
1000Genomes American Sub 694 A=0.248 G=0.752
Genetic variation in the Estonian population Estonian Study-wide 4480 A=0.2904 G=0.7096
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.3020 G=0.6980
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.3018 G=0.6982
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.2256 G=0.7744
HGDP-CEPH-db Supplement 1 Global Study-wide 2084 A=0.2884 G=0.7116
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.296 G=0.704
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.263 G=0.737
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.291 G=0.709
HGDP-CEPH-db Supplement 1 Europe Sub 320 A=0.275 G=0.725
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.380 G=0.620
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.102 G=0.898
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.68 G=0.32
HapMap Global Study-wide 1892 A=0.3044 G=0.6956
HapMap American Sub 770 A=0.292 G=0.708
HapMap African Sub 692 A=0.340 G=0.660
HapMap Asian Sub 254 A=0.252 G=0.748
HapMap Europe Sub 176 A=0.295 G=0.705
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.333 G=0.667
Northern Sweden ACPOP Study-wide 600 A=0.250 G=0.750
SGDP_PRJ Global Study-wide 480 A=0.229 G=0.771
Qatari Global Study-wide 216 A=0.361 G=0.639
A Vietnamese Genetic Variation Database Global Study-wide 210 A=0.310 G=0.690
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 72 A=0.25 G=0.75
Siberian Global Study-wide 54 A=0.28 G=0.72
The Danish reference pan genome Danish Study-wide 40 A=0.42 G=0.57
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 3 NC_000003.12:g.4835664A>G
GRCh37.p13 chr 3 NC_000003.11:g.4877348A>G
ITPR1 RefSeqGene NG_016144.1:g.347317A>G
Gene: ITPR1, inositol 1,4,5-trisphosphate receptor type 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
ITPR1 transcript variant 1 NM_001099952.4:c.7885-111…

NM_001099952.4:c.7885-1110A>G

 		N/A Intron Variant
ITPR1 transcript variant 3 NM_001168272.2:c.7984-111…

NM_001168272.2:c.7984-1110A>G

 		N/A Intron Variant
ITPR1 transcript variant 4 NM_001378452.1:c.8029-111…

NM_001378452.1:c.8029-1110A>G

 		N/A Intron Variant
ITPR1 transcript variant 2 NM_002222.7:c.7840-1110A>G N/A Intron Variant
Gene: LOC124906209, uncharacterized LOC124906209 (minus strand)
Molecule type Change Amino acid[Codon] SO Term
LOC124906209 transcript variant X5 XR_007095794.1:n. N/A Intron Variant
LOC124906209 transcript variant X6 XR_007095795.1:n. N/A Intron Variant
LOC124906209 transcript variant X7 XR_007095796.1:n. N/A Intron Variant
LOC124906209 transcript variant X1 XR_007095790.1:n. N/A Genic Upstream Transcript Variant
LOC124906209 transcript variant X2 XR_007095791.1:n. N/A Genic Upstream Transcript Variant
LOC124906209 transcript variant X3 XR_007095792.1:n. N/A Genic Upstream Transcript Variant
LOC124906209 transcript variant X4 XR_007095793.1:n. N/A Genic Upstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= G
GRCh38.p14 chr 3 NC_000003.12:g.4835664= NC_000003.12:g.4835664A>G
GRCh37.p13 chr 3 NC_000003.11:g.4877348= NC_000003.11:g.4877348A>G
ITPR1 RefSeqGene NG_016144.1:g.347317= NG_016144.1:g.347317A>G
ITPR1 transcript variant 1 NM_001099952.2:c.7885-1110= NM_001099952.2:c.7885-1110A>G
ITPR1 transcript variant 1 NM_001099952.4:c.7885-1110= NM_001099952.4:c.7885-1110A>G
ITPR1 transcript variant 3 NM_001168272.1:c.7984-1110= NM_001168272.1:c.7984-1110A>G
ITPR1 transcript variant 3 NM_001168272.2:c.7984-1110= NM_001168272.2:c.7984-1110A>G
ITPR1 transcript variant 4 NM_001378452.1:c.8029-1110= NM_001378452.1:c.8029-1110A>G
ITPR1 transcript variant 2 NM_002222.5:c.7840-1110= NM_002222.5:c.7840-1110A>G
ITPR1 transcript variant 2 NM_002222.7:c.7840-1110= NM_002222.7:c.7840-1110A>G
ITPR1 transcript variant X1 XM_005265108.1:c.8032-1110= XM_005265108.1:c.8032-1110A>G
ITPR1 transcript variant X2 XM_005265109.1:c.7960-1110= XM_005265109.1:c.7960-1110A>G
ITPR1 transcript variant X3 XM_005265110.1:c.7912-1110= XM_005265110.1:c.7912-1110A>G
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

131 SubSNP, 21 Frequency submissions
No Submitter Submission ID Date (Build)
1 YUSUKE ss4991421 Aug 28, 2002 (107)
2 WI_SSAHASNP ss6451159 Feb 20, 2003 (111)
3 BCM_SSAHASNP ss10100232 Jul 11, 2003 (116)
4 WI_SSAHASNP ss11611038 Jul 11, 2003 (116)
5 BCM_SSAHASNP ss14197252 Dec 05, 2003 (119)
6 CSHL-HAPMAP ss19524967 Feb 27, 2004 (120)
7 ABI ss44454248 Mar 13, 2006 (126)
8 ILLUMINA ss67304935 Dec 02, 2006 (127)
9 ILLUMINA ss67710035 Dec 02, 2006 (127)
10 ILLUMINA ss68222197 Dec 12, 2006 (127)
11 PERLEGEN ss68850746 May 18, 2007 (127)
12 ILLUMINA ss70783586 May 24, 2008 (130)
13 ILLUMINA ss71360223 May 18, 2007 (127)
14 ILLUMINA ss75567570 Dec 06, 2007 (129)
15 HGSV ss77288156 Dec 06, 2007 (129)
16 HGSV ss78779632 Dec 06, 2007 (129)
17 HGSV ss82094598 Dec 15, 2007 (130)
18 KRIBB_YJKIM ss84191557 Dec 15, 2007 (130)
19 BCMHGSC_JDW ss91978233 Mar 24, 2008 (129)
20 BGI ss106237985 Feb 05, 2009 (130)
21 1000GENOMES ss111160663 Jan 25, 2009 (130)
22 1000GENOMES ss111995972 Jan 25, 2009 (130)
23 ILLUMINA-UK ss116953209 Feb 14, 2009 (130)
24 ENSEMBL ss138691956 Dec 01, 2009 (131)
25 ILLUMINA ss154271210 Dec 01, 2009 (131)
26 GMI ss155034162 Dec 01, 2009 (131)
27 ILLUMINA ss159447944 Dec 01, 2009 (131)
28 ILLUMINA ss160644697 Dec 01, 2009 (131)
29 ENSEMBL ss161449076 Dec 01, 2009 (131)
30 COMPLETE_GENOMICS ss161901999 Jul 04, 2010 (132)
31 COMPLETE_GENOMICS ss163036835 Jul 04, 2010 (132)
32 COMPLETE_GENOMICS ss166067350 Jul 04, 2010 (132)
33 ILLUMINA ss173646675 Jul 04, 2010 (132)
34 BUSHMAN ss202059418 Jul 04, 2010 (132)
35 BCM-HGSC-SUB ss206173273 Jul 04, 2010 (132)
36 1000GENOMES ss219949486 Jul 14, 2010 (132)
37 1000GENOMES ss231685015 Jul 14, 2010 (132)
38 1000GENOMES ss239123237 Jul 15, 2010 (132)
39 BL ss252897331 May 09, 2011 (134)
40 GMI ss276991225 May 04, 2012 (137)
41 GMI ss284584006 Apr 25, 2013 (138)
42 PJP ss292786470 May 09, 2011 (134)
43 ILLUMINA ss480842642 May 04, 2012 (137)
44 ILLUMINA ss480859617 May 04, 2012 (137)
45 ILLUMINA ss481793454 Sep 08, 2015 (146)
46 ILLUMINA ss485216196 May 04, 2012 (137)
47 ILLUMINA ss537197416 Sep 08, 2015 (146)
48 TISHKOFF ss556387653 Apr 25, 2013 (138)
49 SSMP ss650051414 Apr 25, 2013 (138)
50 ILLUMINA ss778897349 Sep 08, 2015 (146)
51 ILLUMINA ss783054056 Sep 08, 2015 (146)
52 ILLUMINA ss784012454 Sep 08, 2015 (146)
53 ILLUMINA ss832311942 Sep 08, 2015 (146)
54 ILLUMINA ss832959502 Jul 13, 2019 (153)
55 ILLUMINA ss834358555 Sep 08, 2015 (146)
56 EVA-GONL ss978213718 Aug 21, 2014 (142)
57 JMKIDD_LAB ss1070130312 Aug 21, 2014 (142)
58 1000GENOMES ss1302587352 Aug 21, 2014 (142)
59 DDI ss1429312442 Apr 01, 2015 (144)
60 EVA_GENOME_DK ss1579821296 Apr 01, 2015 (144)
61 EVA_DECODE ss1587673553 Apr 01, 2015 (144)
62 EVA_UK10K_ALSPAC ss1606299569 Apr 01, 2015 (144)
63 EVA_UK10K_TWINSUK ss1649293602 Apr 01, 2015 (144)
64 EVA_SVP ss1712549078 Apr 01, 2015 (144)
65 ILLUMINA ss1752472997 Sep 08, 2015 (146)
66 HAMMER_LAB ss1798769441 Sep 08, 2015 (146)
67 WEILL_CORNELL_DGM ss1921465812 Feb 12, 2016 (147)
68 GENOMED ss1969309032 Jul 19, 2016 (147)
69 JJLAB ss2021283998 Sep 14, 2016 (149)
70 CSHL ss2136689110 Nov 08, 2017 (151)
71 USC_VALOUEV ss2149351446 Dec 20, 2016 (150)
72 HUMAN_LONGEVITY ss2248649729 Dec 20, 2016 (150)
73 SYSTEMSBIOZJU ss2625141875 Nov 08, 2017 (151)
74 ILLUMINA ss2633903475 Nov 08, 2017 (151)
75 GRF ss2704708374 Nov 08, 2017 (151)
76 ILLUMINA ss2710963631 Nov 08, 2017 (151)
77 GNOMAD ss2788945950 Nov 08, 2017 (151)
78 AFFY ss2985245281 Nov 08, 2017 (151)
79 AFFY ss2985862079 Nov 08, 2017 (151)
80 SWEGEN ss2991744193 Nov 08, 2017 (151)
81 BIOINF_KMB_FNS_UNIBA ss3024404036 Nov 08, 2017 (151)
82 CSHL ss3344857845 Nov 08, 2017 (151)
83 ILLUMINA ss3625806849 Oct 11, 2018 (152)
84 ILLUMINA ss3628576591 Oct 11, 2018 (152)
85 ILLUMINA ss3631852517 Oct 11, 2018 (152)
86 ILLUMINA ss3633279698 Oct 11, 2018 (152)
87 ILLUMINA ss3633996057 Oct 11, 2018 (152)
88 ILLUMINA ss3634877406 Oct 11, 2018 (152)
89 ILLUMINA ss3635680319 Oct 11, 2018 (152)
90 ILLUMINA ss3636573357 Oct 11, 2018 (152)
91 ILLUMINA ss3637432606 Oct 11, 2018 (152)
92 ILLUMINA ss3638393789 Oct 11, 2018 (152)
93 ILLUMINA ss3639200536 Oct 11, 2018 (152)
94 ILLUMINA ss3639901534 Oct 11, 2018 (152)
95 ILLUMINA ss3640584709 Oct 11, 2018 (152)
96 ILLUMINA ss3643352449 Oct 11, 2018 (152)
97 ILLUMINA ss3643948672 Oct 11, 2018 (152)
98 ILLUMINA ss3654013743 Oct 11, 2018 (152)
99 EGCUT_WGS ss3659641723 Jul 13, 2019 (153)
100 EVA_DECODE ss3708532006 Jul 13, 2019 (153)
101 ACPOP ss3729584489 Jul 13, 2019 (153)
102 ILLUMINA ss3745177222 Jul 13, 2019 (153)
103 EVA ss3759592511 Jul 13, 2019 (153)
104 ILLUMINA ss3772673029 Jul 13, 2019 (153)
105 PACBIO ss3784220011 Jul 13, 2019 (153)
106 PACBIO ss3789750612 Jul 13, 2019 (153)
107 PACBIO ss3794624334 Jul 13, 2019 (153)
108 KHV_HUMAN_GENOMES ss3802743292 Jul 13, 2019 (153)
109 EVA ss3827632631 Apr 25, 2020 (154)
110 EVA ss3837237703 Apr 25, 2020 (154)
111 EVA ss3842661257 Apr 25, 2020 (154)
112 HGDP ss3847695735 Apr 25, 2020 (154)
113 SGDP_PRJ ss3855110653 Apr 25, 2020 (154)
114 KRGDB ss3900876401 Apr 25, 2020 (154)
115 EVA ss3984969221 Apr 27, 2021 (155)
116 EVA ss4017061834 Apr 27, 2021 (155)
117 TOPMED ss4552460858 Apr 27, 2021 (155)
118 TOMMO_GENOMICS ss5157563239 Apr 27, 2021 (155)
119 1000G_HIGH_COVERAGE ss5252861305 Oct 12, 2022 (156)
120 EVA ss5314828537 Oct 12, 2022 (156)
121 EVA ss5337548245 Oct 12, 2022 (156)
122 HUGCELL_USP ss5452384064 Oct 12, 2022 (156)
123 1000G_HIGH_COVERAGE ss5530602308 Oct 12, 2022 (156)
124 SANFORD_IMAGENETICS ss5631432875 Oct 12, 2022 (156)
125 TOMMO_GENOMICS ss5688764755 Oct 12, 2022 (156)
126 EVA ss5799567653 Oct 12, 2022 (156)
127 YY_MCH ss5803432925 Oct 12, 2022 (156)
128 EVA ss5825272302 Oct 12, 2022 (156)
129 EVA ss5853465734 Oct 12, 2022 (156)
130 EVA ss5867415453 Oct 12, 2022 (156)
131 EVA ss5959689565 Oct 12, 2022 (156)
132 1000Genomes NC_000003.11 - 4877348 Oct 11, 2018 (152)
133 1000Genomes_30x NC_000003.12 - 4835664 Oct 12, 2022 (156)
134 The Avon Longitudinal Study of Parents and Children NC_000003.11 - 4877348 Oct 11, 2018 (152)
135 Genetic variation in the Estonian population NC_000003.11 - 4877348 Oct 11, 2018 (152)
136 The Danish reference pan genome NC_000003.11 - 4877348 Apr 25, 2020 (154)
137 gnomAD - Genomes NC_000003.12 - 4835664 Apr 27, 2021 (155)
138 Genome of the Netherlands Release 5 NC_000003.11 - 4877348 Apr 25, 2020 (154)
139 HGDP-CEPH-db Supplement 1 NC_000003.10 - 4852348 Apr 25, 2020 (154)
140 HapMap NC_000003.12 - 4835664 Apr 25, 2020 (154)
141 KOREAN population from KRGDB NC_000003.11 - 4877348 Apr 25, 2020 (154)
142 Northern Sweden NC_000003.11 - 4877348 Jul 13, 2019 (153)
143 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000003.11 - 4877348 Apr 27, 2021 (155)
144 Qatari NC_000003.11 - 4877348 Apr 25, 2020 (154)
145 SGDP_PRJ NC_000003.11 - 4877348 Apr 25, 2020 (154)
146 Siberian NC_000003.11 - 4877348 Apr 25, 2020 (154)
147 8.3KJPN NC_000003.11 - 4877348 Apr 27, 2021 (155)
148 14KJPN NC_000003.12 - 4835664 Oct 12, 2022 (156)
149 TopMed NC_000003.12 - 4835664 Apr 27, 2021 (155)
150 UK 10K study - Twins NC_000003.11 - 4877348 Oct 11, 2018 (152)
151 A Vietnamese Genetic Variation Database NC_000003.11 - 4877348 Jul 13, 2019 (153)
152 ALFA NC_000003.12 - 4835664 Apr 27, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58654540 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss77288156, ss78779632, ss82094598, ss3639200536, ss3639901534, ss3643948672 NC_000003.9:4852347:A:G NC_000003.12:4835663:A:G (self)
373627, ss91978233, ss111160663, ss111995972, ss116953209, ss161901999, ss163036835, ss166067350, ss202059418, ss206173273, ss252897331, ss276991225, ss284584006, ss292786470, ss480842642, ss1587673553, ss1712549078, ss2136689110, ss3643352449, ss3847695735 NC_000003.10:4852347:A:G NC_000003.12:4835663:A:G (self)
13725215, 7606395, 5379971, 5986235, 3337921, 8053795, 2869354, 195148, 3507742, 7127633, 1867800, 15532546, 7606395, 1654884, ss219949486, ss231685015, ss239123237, ss480859617, ss481793454, ss485216196, ss537197416, ss556387653, ss650051414, ss778897349, ss783054056, ss784012454, ss832311942, ss832959502, ss834358555, ss978213718, ss1070130312, ss1302587352, ss1429312442, ss1579821296, ss1606299569, ss1649293602, ss1752472997, ss1798769441, ss1921465812, ss1969309032, ss2021283998, ss2149351446, ss2625141875, ss2633903475, ss2704708374, ss2710963631, ss2788945950, ss2985245281, ss2985862079, ss2991744193, ss3344857845, ss3625806849, ss3628576591, ss3631852517, ss3633279698, ss3633996057, ss3634877406, ss3635680319, ss3636573357, ss3637432606, ss3638393789, ss3640584709, ss3654013743, ss3659641723, ss3729584489, ss3745177222, ss3759592511, ss3772673029, ss3784220011, ss3789750612, ss3794624334, ss3827632631, ss3837237703, ss3855110653, ss3900876401, ss3984969221, ss4017061834, ss5157563239, ss5314828537, ss5337548245, ss5631432875, ss5799567653, ss5825272302, ss5959689565 NC_000003.11:4877347:A:G NC_000003.12:4835663:A:G (self)
18128243, 97553446, 2291732, 22601859, 389838413, 12604698631, ss2248649729, ss3024404036, ss3708532006, ss3802743292, ss3842661257, ss4552460858, ss5252861305, ss5452384064, ss5530602308, ss5688764755, ss5803432925, ss5853465734, ss5867415453 NC_000003.12:4835663:A:G NC_000003.12:4835663:A:G (self)
ss10100232, ss11611038 NT_005927.15:4806192:A:G NC_000003.12:4835663:A:G (self)
ss14197252, ss19524967 NT_022517.16:4817347:A:G NC_000003.12:4835663:A:G (self)
ss4991421, ss6451159, ss44454248, ss67304935, ss67710035, ss68222197, ss68850746, ss70783586, ss71360223, ss75567570, ss84191557, ss106237985, ss138691956, ss154271210, ss155034162, ss159447944, ss160644697, ss161449076, ss173646675 NT_022517.18:4817347:A:G NC_000003.12:4835663:A:G (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3805032

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07