Name: rs3794603
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3794603

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:28027178 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.114028 (30182/264690, TOPMED)
A=0.103327 (14492/140254, GnomAD)
A=0.24305 (6868/28258, 14KJPN) (+ 18 more)
A=0.09435 (2035/21568, ALFA)
A=0.24582 (4120/16760, 8.3KJPN)
A=0.1416 (907/6404, 1000G_30x)
A=0.1438 (720/5008, 1000G)
A=0.1040 (466/4480, Estonian)
A=0.0960 (370/3854, ALSPAC)
A=0.0968 (359/3708, TWINSUK)
A=0.2507 (734/2928, KOREAN)
A=0.097 (97/998, GoNL)
A=0.113 (68/600, NorthernSweden)
A=0.072 (23/320, HapMap)
G=0.367 (88/240, SGDP_PRJ)
A=0.250 (54/216, Qatari)
A=0.176 (37/210, Vietnamese)
A=0.39 (28/72, Ancient Sardinia)
A=0.10 (4/40, GENOME_DK)
A=0.06 (2/32, Korea1K)
G=0.44 (8/18, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: OCA2 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	21568	G=0.90565	A=0.09435
European	Sub	14286	G=0.89626	A=0.10374
African	Sub	5572	G=0.9578	A=0.0422
African Others	Sub	198	G=0.985	A=0.015
African American	Sub	5374	G=0.9568	A=0.0432
Asian	Sub	112	G=0.714	A=0.286
East Asian	Sub	86	G=0.67	A=0.33
Other Asian	Sub	26	G=0.85	A=0.15
Latin American 1	Sub	146	G=0.822	A=0.178
Latin American 2	Sub	610	G=0.779	A=0.221
South Asian	Sub	98	G=0.69	A=0.31
Other	Sub	744	G=0.872	A=0.128

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.885972	A=0.114028
gnomAD - Genomes	Global	Study-wide	140254	G=0.896673	A=0.103327
gnomAD - Genomes	European	Sub	75944	G=0.88918	A=0.11082
gnomAD - Genomes	African	Sub	42050	G=0.95553	A=0.04447
gnomAD - Genomes	American	Sub	13654	G=0.79252	A=0.20748
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.8818	A=0.1182
gnomAD - Genomes	East Asian	Sub	3128	G=0.7884	A=0.2116
gnomAD - Genomes	Other	Sub	2154	G=0.8524	A=0.1476
14KJPN	JAPANESE	Study-wide	28258	G=0.75695	A=0.24305
Allele Frequency Aggregator	Total	Global	21568	G=0.90565	A=0.09435
Allele Frequency Aggregator	European	Sub	14286	G=0.89626	A=0.10374
Allele Frequency Aggregator	African	Sub	5572	G=0.9578	A=0.0422
Allele Frequency Aggregator	Other	Sub	744	G=0.872	A=0.128
Allele Frequency Aggregator	Latin American 2	Sub	610	G=0.779	A=0.221
Allele Frequency Aggregator	Latin American 1	Sub	146	G=0.822	A=0.178
Allele Frequency Aggregator	Asian	Sub	112	G=0.714	A=0.286
Allele Frequency Aggregator	South Asian	Sub	98	G=0.69	A=0.31
8.3KJPN	JAPANESE	Study-wide	16760	G=0.75418	A=0.24582
1000Genomes_30x	Global	Study-wide	6404	G=0.8584	A=0.1416
1000Genomes_30x	African	Sub	1786	G=0.9720	A=0.0280
1000Genomes_30x	Europe	Sub	1266	G=0.8744	A=0.1256
1000Genomes_30x	South Asian	Sub	1202	G=0.8095	A=0.1905
1000Genomes_30x	East Asian	Sub	1170	G=0.7812	A=0.2188
1000Genomes_30x	American	Sub	980	G=0.783	A=0.217
1000Genomes	Global	Study-wide	5008	G=0.8562	A=0.1438
1000Genomes	African	Sub	1322	G=0.9705	A=0.0295
1000Genomes	East Asian	Sub	1008	G=0.7778	A=0.2222
1000Genomes	Europe	Sub	1006	G=0.8738	A=0.1262
1000Genomes	South Asian	Sub	978	G=0.812	A=0.188
1000Genomes	American	Sub	694	G=0.790	A=0.210
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.8960	A=0.1040
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.9040	A=0.0960
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.9032	A=0.0968
KOREAN population from KRGDB	KOREAN	Study-wide	2928	G=0.7493	A=0.2507
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.903	A=0.097
Northern Sweden	ACPOP	Study-wide	600	G=0.887	A=0.113
HapMap	Global	Study-wide	320	G=0.928	A=0.072
HapMap	African	Sub	116	G=0.974	A=0.026
HapMap	American	Sub	116	G=0.922	A=0.078
HapMap	Asian	Sub	88	G=0.88	A=0.12
SGDP_PRJ	Global	Study-wide	240	G=0.367	A=0.633
Qatari	Global	Study-wide	216	G=0.750	A=0.250
A Vietnamese Genetic Variation Database	Global	Study-wide	210	G=0.824	A=0.176
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	72	G=0.61	A=0.39
The Danish reference pan genome	Danish	Study-wide	40	G=0.90	A=0.10
Korean Genome Project	KOREAN	Study-wide	32	G=0.94	A=0.06
Siberian	Global	Study-wide	18	G=0.44	A=0.56

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.28027178G>A
GRCh37.p13 chr 15	NC_000015.9:g.28272324G>A
OCA2 RefSeqGene	NG_009846.1:g.77135C>T
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.161477G>A
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.161477G>A

Gene: OCA2, OCA2 melanosomal transmembrane protein (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
OCA2 transcript variant 1	NM_000275.3:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant 2	NM_001300984.2:c.515+693C… NM_001300984.2:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X2	XM_011521640.3:c.515+693C… XM_011521640.3:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X1	XM_017022255.2:c.539+693C… XM_017022255.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X3	XM_017022256.2:c.539+693C… XM_017022256.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X4	XM_017022257.2:c.539+693C… XM_017022257.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X5	XM_017022258.2:c.539+693C… XM_017022258.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X8	XM_017022259.2:c.539+693C… XM_017022259.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X9	XM_017022260.2:c.539+693C… XM_017022260.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X14	XM_017022261.2:c.344+693C… XM_017022261.2:c.344+693C>T	N/A	Intron Variant
OCA2 transcript variant X15	XM_017022262.2:c.539+693C… XM_017022262.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X17	XM_017022263.2:c.539+693C… XM_017022263.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X20	XM_017022264.2:c.539+693C… XM_017022264.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X27	XM_017022265.2:c.539+693C… XM_017022265.2:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X6	XM_047432605.1:c.515+693C… XM_047432605.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X7	XM_047432606.1:c.515+693C… XM_047432606.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X10	XM_047432607.1:c.539+693C… XM_047432607.1:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X11	XM_047432608.1:c.515+693C… XM_047432608.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X12	XM_047432609.1:c.515+693C… XM_047432609.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X13	XM_047432610.1:c.539+693C… XM_047432610.1:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X16	XM_047432611.1:c.515+693C… XM_047432611.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X18	XM_047432612.1:c.515+693C… XM_047432612.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X19	XM_047432613.1:c.515+693C… XM_047432613.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X21	XM_047432614.1:c.515+693C… XM_047432614.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X22	XM_047432615.1:c.539+693C… XM_047432615.1:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X23	XM_047432616.1:c.539+693C… XM_047432616.1:c.539+693C>T	N/A	Intron Variant
OCA2 transcript variant X24	XM_047432617.1:c.515+693C… XM_047432617.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X25	XM_047432618.1:c.515+693C… XM_047432618.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X26	XM_047432619.1:c.515+693C… XM_047432619.1:c.515+693C>T	N/A	Intron Variant
OCA2 transcript variant X28	XR_001751294.2:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 15	NC_000015.10:g.28027178=	NC_000015.10:g.28027178G>A
GRCh37.p13 chr 15	NC_000015.9:g.28272324=	NC_000015.9:g.28272324G>A
OCA2 RefSeqGene	NG_009846.1:g.77135=	NG_009846.1:g.77135C>T
GRCh38.p14 chr 15 fix patch HG2139_PATCH	NW_011332701.1:g.161477=	NW_011332701.1:g.161477G>A
GRCh38.p14 chr 15 alt locus HSCHR15_4_CTG8	NT_187660.1:g.161477=	NT_187660.1:g.161477G>A
OCA2 transcript variant 1	NM_000275.2:c.515+693=	NM_000275.2:c.515+693C>T
OCA2 transcript variant 1	NM_000275.3:c.515+693=	NM_000275.3:c.515+693C>T
OCA2 transcript variant 2	NM_001300984.2:c.515+693=	NM_001300984.2:c.515+693C>T
OCA2 transcript variant X1	XM_005268259.1:c.515+693=	XM_005268259.1:c.515+693C>T
OCA2 transcript variant X2	XM_011521640.3:c.515+693=	XM_011521640.3:c.515+693C>T
OCA2 transcript variant X1	XM_017022255.2:c.539+693=	XM_017022255.2:c.539+693C>T
OCA2 transcript variant X3	XM_017022256.2:c.539+693=	XM_017022256.2:c.539+693C>T
OCA2 transcript variant X4	XM_017022257.2:c.539+693=	XM_017022257.2:c.539+693C>T
OCA2 transcript variant X5	XM_017022258.2:c.539+693=	XM_017022258.2:c.539+693C>T
OCA2 transcript variant X8	XM_017022259.2:c.539+693=	XM_017022259.2:c.539+693C>T
OCA2 transcript variant X9	XM_017022260.2:c.539+693=	XM_017022260.2:c.539+693C>T
OCA2 transcript variant X14	XM_017022261.2:c.344+693=	XM_017022261.2:c.344+693C>T
OCA2 transcript variant X15	XM_017022262.2:c.539+693=	XM_017022262.2:c.539+693C>T
OCA2 transcript variant X17	XM_017022263.2:c.539+693=	XM_017022263.2:c.539+693C>T
OCA2 transcript variant X20	XM_017022264.2:c.539+693=	XM_017022264.2:c.539+693C>T
OCA2 transcript variant X27	XM_017022265.2:c.539+693=	XM_017022265.2:c.539+693C>T
OCA2 transcript variant X6	XM_047432605.1:c.515+693=	XM_047432605.1:c.515+693C>T
OCA2 transcript variant X7	XM_047432606.1:c.515+693=	XM_047432606.1:c.515+693C>T
OCA2 transcript variant X10	XM_047432607.1:c.539+693=	XM_047432607.1:c.539+693C>T
OCA2 transcript variant X11	XM_047432608.1:c.515+693=	XM_047432608.1:c.515+693C>T
OCA2 transcript variant X12	XM_047432609.1:c.515+693=	XM_047432609.1:c.515+693C>T
OCA2 transcript variant X13	XM_047432610.1:c.539+693=	XM_047432610.1:c.539+693C>T
OCA2 transcript variant X16	XM_047432611.1:c.515+693=	XM_047432611.1:c.515+693C>T
OCA2 transcript variant X18	XM_047432612.1:c.515+693=	XM_047432612.1:c.515+693C>T
OCA2 transcript variant X19	XM_047432613.1:c.515+693=	XM_047432613.1:c.515+693C>T
OCA2 transcript variant X21	XM_047432614.1:c.515+693=	XM_047432614.1:c.515+693C>T
OCA2 transcript variant X22	XM_047432615.1:c.539+693=	XM_047432615.1:c.539+693C>T
OCA2 transcript variant X23	XM_047432616.1:c.539+693=	XM_047432616.1:c.539+693C>T
OCA2 transcript variant X24	XM_047432617.1:c.515+693=	XM_047432617.1:c.515+693C>T
OCA2 transcript variant X25	XM_047432618.1:c.515+693=	XM_047432618.1:c.515+693C>T
OCA2 transcript variant X26	XM_047432619.1:c.515+693=	XM_047432619.1:c.515+693C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

51 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	YUSUKE	ss4980977	Aug 28, 2002 (107)
2	ILLUMINA	ss65776974	Oct 14, 2006 (127)
3	GMI	ss156360006	Dec 01, 2009 (131)
4	BUSHMAN	ss200653852	Jul 04, 2010 (132)
5	1000GENOMES	ss226813004	Jul 14, 2010 (132)
6	1000GENOMES	ss236722524	Jul 15, 2010 (132)
7	1000GENOMES	ss243120531	Jul 15, 2010 (132)
8	GMI	ss282192804	May 04, 2012 (137)
9	TISHKOFF	ss564383419	Apr 25, 2013 (138)
10	SSMP	ss660095511	Apr 25, 2013 (138)
11	EVA-GONL	ss991624081	Aug 21, 2014 (142)
12	JMKIDD_LAB	ss1080003106	Aug 21, 2014 (142)
13	1000GENOMES	ss1352820258	Aug 21, 2014 (142)
14	EVA_GENOME_DK	ss1577522812	Apr 01, 2015 (144)
15	EVA_UK10K_ALSPAC	ss1632670669	Apr 01, 2015 (144)
16	EVA_UK10K_TWINSUK	ss1675664702	Apr 01, 2015 (144)
17	EVA_DECODE	ss1695635677	Apr 01, 2015 (144)
18	WEILL_CORNELL_DGM	ss1935021115	Feb 12, 2016 (147)
19	JJLAB	ss2028290892	Sep 14, 2016 (149)
20	USC_VALOUEV	ss2156687884	Dec 20, 2016 (150)
21	HUMAN_LONGEVITY	ss2205526431	Dec 20, 2016 (150)
22	SYSTEMSBIOZJU	ss2628638610	Nov 08, 2017 (151)
23	GRF	ss2701146909	Nov 08, 2017 (151)
24	GNOMAD	ss2932983926	Nov 08, 2017 (151)
25	SWEGEN	ss3013005655	Nov 08, 2017 (151)
26	BIOINF_KMB_FNS_UNIBA	ss3027969696	Nov 08, 2017 (151)
27	CSHL	ss3351041870	Nov 08, 2017 (151)
28	EGCUT_WGS	ss3680177199	Jul 13, 2019 (153)
29	EVA_DECODE	ss3697584033	Jul 13, 2019 (153)
30	ACPOP	ss3740787014	Jul 13, 2019 (153)
31	EVA	ss3752891043	Jul 13, 2019 (153)
32	KHV_HUMAN_GENOMES	ss3818208248	Jul 13, 2019 (153)
33	EVA	ss3834156554	Apr 27, 2020 (154)
34	SGDP_PRJ	ss3882551512	Apr 27, 2020 (154)
35	KRGDB	ss3931675430	Apr 27, 2020 (154)
36	KOGIC	ss3975852879	Apr 27, 2020 (154)
37	EVA	ss3985707024	Apr 26, 2021 (155)
38	VINODS	ss4031999152	Apr 26, 2021 (155)
39	TOPMED	ss4985711430	Apr 26, 2021 (155)
40	TOMMO_GENOMICS	ss5215403875	Apr 26, 2021 (155)
41	1000G_HIGH_COVERAGE	ss5297859449	Oct 16, 2022 (156)
42	EVA	ss5418193684	Oct 16, 2022 (156)
43	HUGCELL_USP	ss5491675818	Oct 16, 2022 (156)
44	1000G_HIGH_COVERAGE	ss5598970415	Oct 16, 2022 (156)
45	SANFORD_IMAGENETICS	ss5657174965	Oct 16, 2022 (156)
46	TOMMO_GENOMICS	ss5768978542	Oct 16, 2022 (156)
47	YY_MCH	ss5815188182	Oct 16, 2022 (156)
48	EVA	ss5827983069	Oct 16, 2022 (156)
49	EVA	ss5851227621	Oct 16, 2022 (156)
50	EVA	ss5875249107	Oct 16, 2022 (156)
51	EVA	ss5948585480	Oct 16, 2022 (156)
52	1000Genomes	NC_000015.9 - 28272324	Oct 12, 2018 (152)
53	1000Genomes_30x	NC_000015.10 - 28027178	Oct 16, 2022 (156)
54	The Avon Longitudinal Study of Parents and Children	NC_000015.9 - 28272324	Oct 12, 2018 (152)
55	Genetic variation in the Estonian population	NC_000015.9 - 28272324	Oct 12, 2018 (152)
56	The Danish reference pan genome	NC_000015.9 - 28272324	Apr 27, 2020 (154)
57	gnomAD - Genomes	NC_000015.10 - 28027178	Apr 26, 2021 (155)
58	Genome of the Netherlands Release 5	NC_000015.9 - 28272324	Apr 27, 2020 (154)
59	HapMap	NC_000015.10 - 28027178	Apr 27, 2020 (154)
60	KOREAN population from KRGDB	NC_000015.9 - 28272324	Apr 27, 2020 (154)
61	Korean Genome Project	NC_000015.10 - 28027178	Apr 27, 2020 (154)
62	Northern Sweden	NC_000015.9 - 28272324	Jul 13, 2019 (153)
63	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000015.9 - 28272324	Apr 26, 2021 (155)
64	Qatari	NC_000015.9 - 28272324	Apr 27, 2020 (154)
65	SGDP_PRJ	NC_000015.9 - 28272324	Apr 27, 2020 (154)
66	Siberian	NC_000015.9 - 28272324	Apr 27, 2020 (154)
67	8.3KJPN	NC_000015.9 - 28272324	Apr 26, 2021 (155)
68	14KJPN	NC_000015.10 - 28027178	Oct 16, 2022 (156)
69	TopMed	NC_000015.10 - 28027178	Apr 26, 2021 (155)
70	UK 10K study - Twins	NC_000015.9 - 28272324	Oct 12, 2018 (152)
71	A Vietnamese Genetic Variation Database	NC_000015.9 - 28272324	Jul 13, 2019 (153)
72	ALFA	NC_000015.10 - 28027178	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss200653852, ss282192804, ss1695635677	NC_000015.8:25945918:G:A	NC_000015.10:28027177:G:A	(self)
65867342, 36574679, 25915447, 3792547, 16338014, 38852824, 14071879, 932951, 17063045, 34568492, 9204238, 73373182, 36574679, 8137770, ss226813004, ss236722524, ss243120531, ss564383419, ss660095511, ss991624081, ss1080003106, ss1352820258, ss1577522812, ss1632670669, ss1675664702, ss1935021115, ss2028290892, ss2156687884, ss2628638610, ss2701146909, ss2932983926, ss3013005655, ss3351041870, ss3680177199, ss3740787014, ss3752891043, ss3834156554, ss3882551512, ss3931675430, ss3985707024, ss5215403875, ss5418193684, ss5657174965, ss5827983069, ss5948585480	NC_000015.9:28272323:G:A	NC_000015.10:28027177:G:A	(self)
86496350, 464269292, 1232539, 32230880, 102815646, 201257090, 5427112643, ss2205526431, ss3027969696, ss3697584033, ss3818208248, ss3975852879, ss4985711430, ss5297859449, ss5491675818, ss5598970415, ss5768978542, ss5815188182, ss5851227621, ss5875249107	NC_000015.10:28027177:G:A	NC_000015.10:28027177:G:A	(self)
ss4980977, ss65776974, ss156360006	NT_026446.14:4707470:G:A	NC_000015.10:28027177:G:A	(self)
ss4031999152	NT_187660.1:161476:G:A	NC_000015.10:28027177:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3794603

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3794603