Name: rs3657
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs3657

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr12:52286224 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: T>A / T>C / T>G
Variation Type: SNV Single Nucleotide Variation
Frequency: C=0.471850 (124894/264690, TOPMED)
C=0.490341 (68635/139974, GnomAD)
C=0.49035 (27278/55630, ALFA) (+ 18 more)
C=0.20716 (5854/28258, 14KJPN)
C=0.46253 (9926/21460, ExAC)
C=0.20704 (3470/16760, 8.3KJPN)
C=0.49992 (6354/12710, GO-ESP)
C=0.4030 (2581/6404, 1000G_30x)
C=0.3946 (1976/5008, 1000G)
C=0.4967 (2225/4480, Estonian)
T=0.4746 (1829/3854, ALSPAC)
T=0.4687 (1738/3708, TWINSUK)
C=0.2283 (667/2922, KOREAN)
C=0.2216 (406/1832, Korea1K)
T=0.473 (472/998, GoNL)
C=0.126 (77/613, Vietnamese)
T=0.438 (263/600, NorthernSweden)
T=0.388 (125/322, SGDP_PRJ)
C=0.417 (90/216, Qatari)
C=0.40 (16/40, GENOME_DK)
T=0.34 (11/32, Siberian)

Clinical Significance: Reported in ClinVar
Gene : Consequence: KRT86 : Intron Variant
KRT81 : 3 Prime UTR Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	55630	T=0.50965	C=0.49035
European	Sub	38454	T=0.48427	C=0.51573
African	Sub	5532	T=0.5101	C=0.4899
African Others	Sub	188	T=0.590	C=0.410
African American	Sub	5344	T=0.5073	C=0.4927
Asian	Sub	494	T=0.753	C=0.247
East Asian	Sub	398	T=0.771	C=0.229
Other Asian	Sub	96	T=0.68	C=0.32
Latin American 1	Sub	572	T=0.516	C=0.484
Latin American 2	Sub	4898	T=0.6886	C=0.3114
South Asian	Sub	162	T=0.525	C=0.475
Other	Sub	5518	T=0.5043	C=0.4957

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	T=0.528150	C=0.471850
gnomAD - Genomes	Global	Study-wide	139974	T=0.509659	C=0.490341
gnomAD - Genomes	European	Sub	75810	T=0.47233	C=0.52767
gnomAD - Genomes	African	Sub	41922	T=0.52326	C=0.47674
gnomAD - Genomes	American	Sub	13644	T=0.59960	C=0.40040
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	T=0.5424	C=0.4576
gnomAD - Genomes	East Asian	Sub	3126	T=0.7879	C=0.2121
gnomAD - Genomes	Other	Sub	2150	T=0.5349	C=0.4651
Allele Frequency Aggregator	Total	Global	55630	T=0.50965	C=0.49035
Allele Frequency Aggregator	European	Sub	38454	T=0.48427	C=0.51573
Allele Frequency Aggregator	African	Sub	5532	T=0.5101	C=0.4899
Allele Frequency Aggregator	Other	Sub	5518	T=0.5043	C=0.4957
Allele Frequency Aggregator	Latin American 2	Sub	4898	T=0.6886	C=0.3114
Allele Frequency Aggregator	Latin American 1	Sub	572	T=0.516	C=0.484
Allele Frequency Aggregator	Asian	Sub	494	T=0.753	C=0.247
Allele Frequency Aggregator	South Asian	Sub	162	T=0.525	C=0.475
14KJPN	JAPANESE	Study-wide	28258	T=0.79284	C=0.20716
ExAC	Global	Study-wide	21460	T=0.53747	C=0.46253
ExAC	Europe	Sub	9344	T=0.4882	C=0.5118
ExAC	Asian	Sub	8808	T=0.5996	C=0.4004
ExAC	African	Sub	2690	T=0.4955	C=0.5045
ExAC	American	Sub	432	T=0.618	C=0.382
ExAC	Other	Sub	186	T=0.489	C=0.511
8.3KJPN	JAPANESE	Study-wide	16760	T=0.79296	C=0.20704
GO Exome Sequencing Project	Global	Study-wide	12710	T=0.50008	C=0.49992
GO Exome Sequencing Project	European American	Sub	8418	T=0.4932	C=0.5068
GO Exome Sequencing Project	African American	Sub	4292	T=0.5135	C=0.4865
1000Genomes_30x	Global	Study-wide	6404	T=0.5970	C=0.4030
1000Genomes_30x	African	Sub	1786	T=0.5230	C=0.4770
1000Genomes_30x	Europe	Sub	1266	T=0.4763	C=0.5237
1000Genomes_30x	South Asian	Sub	1202	T=0.5757	C=0.4243
1000Genomes_30x	East Asian	Sub	1170	T=0.8385	C=0.1615
1000Genomes_30x	American	Sub	980	T=0.626	C=0.374
1000Genomes	Global	Study-wide	5008	T=0.6054	C=0.3946
1000Genomes	African	Sub	1322	T=0.5287	C=0.4713
1000Genomes	East Asian	Sub	1008	T=0.8403	C=0.1597
1000Genomes	Europe	Sub	1006	T=0.4831	C=0.5169
1000Genomes	South Asian	Sub	978	T=0.577	C=0.423
1000Genomes	American	Sub	694	T=0.628	C=0.372
Genetic variation in the Estonian population	Estonian	Study-wide	4480	T=0.5033	C=0.4967
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	T=0.4746	C=0.5254
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	T=0.4687	C=0.5313
KOREAN population from KRGDB	KOREAN	Study-wide	2922	T=0.7717	C=0.2283
Korean Genome Project	KOREAN	Study-wide	1832	T=0.7784	C=0.2216
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	T=0.473	C=0.527
A Vietnamese Genetic Variation Database	Global	Study-wide	613	T=0.874	C=0.126
Northern Sweden	ACPOP	Study-wide	600	T=0.438	C=0.562
SGDP_PRJ	Global	Study-wide	322	T=0.388	C=0.612
Qatari	Global	Study-wide	216	T=0.583	C=0.417
The Danish reference pan genome	Danish	Study-wide	40	T=0.60	C=0.40
Siberian	Global	Study-wide	32	T=0.34	C=0.66

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 12	NC_000012.12:g.52286224T>A
GRCh38.p14 chr 12	NC_000012.12:g.52286224T>C
GRCh38.p14 chr 12	NC_000012.12:g.52286224T>G
GRCh37.p13 chr 12	NC_000012.11:g.52680008T>A
GRCh37.p13 chr 12	NC_000012.11:g.52680008T>C
GRCh37.p13 chr 12	NC_000012.11:g.52680008T>G
KRT86 RefSeqGene	NG_008086.2:g.16580T>A
KRT86 RefSeqGene	NG_008086.2:g.16580T>C
KRT86 RefSeqGene	NG_008086.2:g.16580T>G
KRT81 RefSeqGene	NG_008184.1:g.10292A>T
KRT81 RefSeqGene	NG_008184.1:g.10292A>G
KRT81 RefSeqGene	NG_008184.1:g.10292A>C

Gene: KRT86, keratin 86 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
KRT86 transcript	NM_001320198.2:c.-5+10278… NM_001320198.2:c.-5+10278T>A	N/A	Intron Variant
KRT86 transcript variant X1	XM_005268866.5:c.129+1027… XM_005268866.5:c.129+10278T>A	N/A	Intron Variant

Gene: KRT81, keratin 81 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
KRT81 transcript variant 1	NM_002281.4:c.*31=	N/A	3 Prime UTR Variant
KRT81 transcript variant X1	XM_047428838.1:c.*31=	N/A	3 Prime UTR Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: C (allele ID: 1265119 )

ClinVar Accession	Disease Names	Clinical Significance
RCV001679112.1	not provided	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	T=	A	C	G
GRCh38.p14 chr 12	NC_000012.12:g.52286224=	NC_000012.12:g.52286224T>A	NC_000012.12:g.52286224T>C	NC_000012.12:g.52286224T>G
GRCh37.p13 chr 12	NC_000012.11:g.52680008=	NC_000012.11:g.52680008T>A	NC_000012.11:g.52680008T>C	NC_000012.11:g.52680008T>G
KRT86 RefSeqGene	NG_008086.2:g.16580=	NG_008086.2:g.16580T>A	NG_008086.2:g.16580T>C	NG_008086.2:g.16580T>G
KRT81 RefSeqGene	NG_008184.1:g.10292=	NG_008184.1:g.10292A>T	NG_008184.1:g.10292A>G	NG_008184.1:g.10292A>C
KRT81 transcript variant 1	NM_002281.4:c.*31=	NM_002281.4:c.*31A>T	NM_002281.4:c.*31A>G	NM_002281.4:c.*31A>C
KRT81 transcript	NM_002281.3:c.*31=	NM_002281.3:c.*31A>T	NM_002281.3:c.*31A>G	NM_002281.3:c.*31A>C
KRT81 transcript variant X1	XM_047428838.1:c.*31=	XM_047428838.1:c.*31A>T	XM_047428838.1:c.*31A>G	XM_047428838.1:c.*31A>C
KRT86 transcript	NM_001320198.2:c.-5+10278=	NM_001320198.2:c.-5+10278T>A	NM_001320198.2:c.-5+10278T>C	NM_001320198.2:c.-5+10278T>G
KRT86 transcript variant X1	XM_005268866.1:c.129+10278=	XM_005268866.1:c.129+10278T>A	XM_005268866.1:c.129+10278T>C	XM_005268866.1:c.129+10278T>G
KRT86 transcript variant X1	XM_005268866.5:c.129+10278=	XM_005268866.5:c.129+10278T>A	XM_005268866.5:c.129+10278T>C	XM_005268866.5:c.129+10278T>G
KRT86 transcript variant X2	XM_005268867.1:c.-5+10278=	XM_005268867.1:c.-5+10278T>A	XM_005268867.1:c.-5+10278T>C	XM_005268867.1:c.-5+10278T>G
KRT86 transcript variant X3	XM_005268868.1:c.-4-15689=	XM_005268868.1:c.-4-15689T>A	XM_005268868.1:c.-4-15689T>C	XM_005268868.1:c.-4-15689T>G

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

103 SubSNP, 23 Frequency, 1 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	WIAF	ss3692	Sep 19, 2000 (36)
2	YUSUKE	ss3214221	Sep 28, 2001 (100)
3	CSHL-HAPMAP	ss16566030	Feb 27, 2004 (120)
4	SSAHASNP	ss20935647	Apr 05, 2004 (121)
5	PERLEGEN	ss23300416	Sep 20, 2004 (123)
6	ABI	ss38951271	Mar 15, 2006 (126)
7	HGSV	ss77773939	Dec 06, 2007 (129)
8	HGSV	ss78727848	Dec 06, 2007 (129)
9	BCMHGSC_JDW	ss89153019	Mar 24, 2008 (129)
10	HUMANGENOME_JCVI	ss97229490	Feb 05, 2009 (130)
11	1000GENOMES	ss111942822	Jan 25, 2009 (130)
12	1000GENOMES	ss113544950	Jan 25, 2009 (130)
13	ENSEMBL	ss133167557	Dec 01, 2009 (131)
14	ENSEMBL	ss142939041	Dec 01, 2009 (131)
15	GMI	ss157476018	Dec 01, 2009 (131)
16	ILLUMINA	ss160631178	Dec 01, 2009 (131)
17	COMPLETE_GENOMICS	ss168306599	Jul 04, 2010 (132)
18	ILLUMINA	ss169077935	Jul 04, 2010 (132)
19	COMPLETE_GENOMICS	ss169844745	Jul 04, 2010 (132)
20	COMPLETE_GENOMICS	ss175128564	Jul 04, 2010 (132)
21	BUSHMAN	ss198182281	Jul 04, 2010 (132)
22	BCM-HGSC-SUB	ss208305577	Jul 04, 2010 (132)
23	1000GENOMES	ss225754819	Jul 14, 2010 (132)
24	1000GENOMES	ss235936230	Jul 15, 2010 (132)
25	1000GENOMES	ss242495371	Jul 15, 2010 (132)
26	BL	ss255120770	May 09, 2011 (134)
27	GMI	ss281397847	May 04, 2012 (137)
28	GMI	ss286561981	Apr 25, 2013 (138)
29	PJP	ss291251114	May 09, 2011 (134)
30	ILLUMINA	ss481739627	Sep 08, 2015 (146)
31	1000GENOMES	ss491042404	May 04, 2012 (137)
32	ILLUMINA	ss532745226	Sep 08, 2015 (146)
33	TISHKOFF	ss563168240	Apr 25, 2013 (138)
34	SSMP	ss658723926	Apr 25, 2013 (138)
35	NHLBI-ESP	ss713092641	Apr 25, 2013 (138)
36	JMKIDD_LAB	ss974483649	Aug 21, 2014 (142)
37	EVA-GONL	ss989537508	Aug 21, 2014 (142)
38	JMKIDD_LAB	ss1067533956	Aug 21, 2014 (142)
39	JMKIDD_LAB	ss1078463521	Aug 21, 2014 (142)
40	1000GENOMES	ss1345031787	Aug 21, 2014 (142)
41	DDI	ss1426934201	Apr 01, 2015 (144)
42	EVA_GENOME_DK	ss1576285504	Apr 01, 2015 (144)
43	EVA_DECODE	ss1599209055	Apr 01, 2015 (144)
44	EVA_UK10K_ALSPAC	ss1628599311	Apr 01, 2015 (144)
45	EVA_UK10K_TWINSUK	ss1671593344	Apr 01, 2015 (144)
46	EVA_EXAC	ss1690912788	Apr 01, 2015 (144)
47	HAMMER_LAB	ss1807247172	Sep 08, 2015 (146)
48	WEILL_CORNELL_DGM	ss1932901910	Feb 12, 2016 (147)
49	JJLAB	ss2027201943	Sep 14, 2016 (149)
50	USC_VALOUEV	ss2155540006	Dec 20, 2016 (150)
51	HUMAN_LONGEVITY	ss2189822538	Dec 20, 2016 (150)
52	SYSTEMSBIOZJU	ss2628081664	Nov 08, 2017 (151)
53	GRF	ss2699883369	Nov 08, 2017 (151)
54	GNOMAD	ss2739826543	Nov 08, 2017 (151)
55	GNOMAD	ss2748870894	Nov 08, 2017 (151)
56	GNOMAD	ss2910550085	Nov 08, 2017 (151)
57	SWEGEN	ss3009695071	Nov 08, 2017 (151)
58	BIOINF_KMB_FNS_UNIBA	ss3027409408	Nov 08, 2017 (151)
59	CSHL	ss3350065729	Nov 08, 2017 (151)
60	ILLUMINA	ss3626878022	Oct 12, 2018 (152)
61	ILLUMINA	ss3636189935	Oct 12, 2018 (152)
62	ILLUMINA	ss3637963233	Oct 12, 2018 (152)
63	OMUKHERJEE_ADBS	ss3646442312	Oct 12, 2018 (152)
64	URBANLAB	ss3649838567	Oct 12, 2018 (152)
65	EGCUT_WGS	ss3676967393	Jul 13, 2019 (153)
66	EVA_DECODE	ss3693679005	Jul 13, 2019 (153)
67	ACPOP	ss3739025368	Jul 13, 2019 (153)
68	EVA	ss3750484872	Jul 13, 2019 (153)
69	PACBIO	ss3787227692	Jul 13, 2019 (153)
70	PACBIO	ss3792329149	Jul 13, 2019 (153)
71	PACBIO	ss3797211936	Jul 13, 2019 (153)
72	KHV_HUMAN_GENOMES	ss3815814098	Jul 13, 2019 (153)
73	EVA	ss3824730036	Apr 27, 2020 (154)
74	EVA	ss3825821634	Apr 27, 2020 (154)
75	EVA	ss3833124931	Apr 27, 2020 (154)
76	EVA	ss3840132604	Apr 27, 2020 (154)
77	EVA	ss3845619051	Apr 27, 2020 (154)
78	SGDP_PRJ	ss3878282156	Apr 27, 2020 (154)
79	KRGDB	ss3926915226	Apr 27, 2020 (154)
80	KOGIC	ss3971943055	Apr 27, 2020 (154)
81	FSA-LAB	ss3984028477	Apr 26, 2021 (155)
82	EVA	ss3986059674	Apr 26, 2021 (155)
83	EVA	ss3986570246	Apr 26, 2021 (155)
84	TOPMED	ss4918436951	Apr 26, 2021 (155)
85	TOMMO_GENOMICS	ss5206341073	Apr 26, 2021 (155)
86	1000G_HIGH_COVERAGE	ss5290824043	Oct 13, 2022 (156)
87	EVA	ss5405662292	Oct 13, 2022 (156)
88	HUGCELL_USP	ss5485575941	Oct 13, 2022 (156)
89	1000G_HIGH_COVERAGE	ss5588317710	Oct 13, 2022 (156)
90	EVA	ss5624032803	Oct 13, 2022 (156)
91	SANFORD_IMAGENETICS	ss5653161421	Oct 13, 2022 (156)
92	TOMMO_GENOMICS	ss5756138633	Oct 13, 2022 (156)
93	EVA	ss5800065019	Oct 13, 2022 (156)
94	EVA	ss5800177334	Oct 13, 2022 (156)
95	YY_MCH	ss5813301944	Oct 13, 2022 (156)
96	EVA	ss5837971766	Oct 13, 2022 (156)
97	EVA	ss5848352730	Oct 13, 2022 (156)
98	EVA	ss5850382911	Oct 13, 2022 (156)
99	EVA	ss5904409570	Oct 13, 2022 (156)
100	EVA	ss5936553252	Oct 13, 2022 (156)
101	EVA	ss5944524728	Oct 13, 2022 (156)
102	EVA	ss5980739685	Oct 13, 2022 (156)
103	EVA	ss5981275772	Oct 13, 2022 (156)
104	1000Genomes	NC_000012.11 - 52680008	Oct 12, 2018 (152)
105	1000Genomes_30x	NC_000012.12 - 52286224	Oct 13, 2022 (156)
106	The Avon Longitudinal Study of Parents and Children	NC_000012.11 - 52680008	Oct 12, 2018 (152)
107	Genetic variation in the Estonian population	NC_000012.11 - 52680008	Oct 12, 2018 (152)
108	ExAC	NC_000012.11 - 52680008	Oct 12, 2018 (152)
109	The Danish reference pan genome	NC_000012.11 - 52680008	Apr 27, 2020 (154)
110	gnomAD - Genomes	NC_000012.12 - 52286224	Apr 26, 2021 (155)
111	gnomAD - Exomes Submission ignored due to conflicting rows: Row 9055966 (NC_000012.11:52680007:T:T 153323/153324, NC_000012.11:52680007:T:A 1/153324) Row 9055967 (NC_000012.11:52680007:T:T 85628/153324, NC_000012.11:52680007:T:C 67696/153324)	-	Jul 13, 2019 (153)
112	gnomAD - Exomes Submission ignored due to conflicting rows: Row 9055966 (NC_000012.11:52680007:T:T 153323/153324, NC_000012.11:52680007:T:A 1/153324) Row 9055967 (NC_000012.11:52680007:T:T 85628/153324, NC_000012.11:52680007:T:C 67696/153324)	-	Jul 13, 2019 (153)
113	GO Exome Sequencing Project	NC_000012.11 - 52680008	Oct 12, 2018 (152)
114	Genome of the Netherlands Release 5	NC_000012.11 - 52680008	Apr 27, 2020 (154)
115	KOREAN population from KRGDB	NC_000012.11 - 52680008	Apr 27, 2020 (154)
116	Korean Genome Project	NC_000012.12 - 52286224	Apr 27, 2020 (154)
117	Northern Sweden	NC_000012.11 - 52680008	Jul 13, 2019 (153)
118	Qatari	NC_000012.11 - 52680008	Apr 27, 2020 (154)
119	SGDP_PRJ	NC_000012.11 - 52680008	Apr 27, 2020 (154)
120	Siberian	NC_000012.11 - 52680008	Apr 27, 2020 (154)
121	8.3KJPN	NC_000012.11 - 52680008	Apr 26, 2021 (155)
122	14KJPN	NC_000012.12 - 52286224	Oct 13, 2022 (156)
123	TopMed	NC_000012.12 - 52286224	Apr 26, 2021 (155)
124	UK 10K study - Twins	NC_000012.11 - 52680008	Oct 12, 2018 (152)
125	A Vietnamese Genetic Variation Database	NC_000012.11 - 52680008	Jul 13, 2019 (153)
126	ALFA	NC_000012.12 - 52286224	Apr 26, 2021 (155)
127	ClinVar	RCV001679112.1	Oct 13, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs117958532	Aug 16, 2010 (132)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss198182281	NC_000012.10:50966274:T:A	NC_000012.12:52286223:T:A	(self)
ss2739826543	NC_000012.11:52680007:T:A	NC_000012.12:52286223:T:A	(self)
ss77773939, ss78727848	NC_000012.9:50966274:T:C	NC_000012.12:52286223:T:C	(self)
ss89153019, ss111942822, ss113544950, ss168306599, ss169844745, ss175128564, ss198182281, ss208305577, ss255120770, ss281397847, ss286561981, ss291251114, ss1599209055	NC_000012.10:50966274:T:C	NC_000012.12:52286223:T:C	(self)
57781442, 32084545, 22705641, 1210583, 2965125, 1187515, 14317355, 34092620, 12310233, 14943840, 30299136, 8056360, 64310380, 32084545, 7122508, ss225754819, ss235936230, ss242495371, ss481739627, ss491042404, ss532745226, ss563168240, ss658723926, ss713092641, ss974483649, ss989537508, ss1067533956, ss1078463521, ss1345031787, ss1426934201, ss1576285504, ss1628599311, ss1671593344, ss1690912788, ss1807247172, ss1932901910, ss2027201943, ss2155540006, ss2628081664, ss2699883369, ss2739826543, ss2748870894, ss2910550085, ss3009695071, ss3350065729, ss3626878022, ss3636189935, ss3637963233, ss3646442312, ss3676967393, ss3739025368, ss3750484872, ss3787227692, ss3792329149, ss3797211936, ss3824730036, ss3825821634, ss3833124931, ss3840132604, ss3878282156, ss3926915226, ss3984028477, ss3986059674, ss3986570246, ss5206341073, ss5405662292, ss5624032803, ss5653161421, ss5800065019, ss5800177334, ss5837971766, ss5848352730, ss5936553252, ss5944524728, ss5980739685, ss5981275772	NC_000012.11:52680007:T:C	NC_000012.12:52286223:T:C	(self)
RCV001679112.1, 75843645, 407461696, 28321056, 89975737, 133982608, 10087271323, ss2189822538, ss3027409408, ss3649838567, ss3693679005, ss3815814098, ss3845619051, ss3971943055, ss4918436951, ss5290824043, ss5485575941, ss5588317710, ss5756138633, ss5813301944, ss5850382911, ss5904409570	NC_000012.12:52286223:T:C	NC_000012.12:52286223:T:C	(self)
ss16566030, ss20935647	NT_029419.10:14823313:T:C	NC_000012.12:52286223:T:C	(self)
ss3692, ss3214221, ss23300416, ss38951271, ss97229490, ss133167557, ss142939041, ss157476018, ss160631178, ss169077935	NT_029419.12:14823313:T:C	NC_000012.12:52286223:T:C	(self)
ss198182281	NC_000012.10:50966274:T:G	NC_000012.12:52286223:T:G	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs3657

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs3657