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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2968864

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr7:150925074 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.156678 (41471/264690, TOPMED)
C=0.226536 (45044/198838, ALFA)
C=0.162099 (22714/140124, GnomAD) (+ 21 more)
C=0.09229 (7263/78696, PAGE_STUDY)
C=0.04024 (1137/28258, 14KJPN)
C=0.04034 (676/16758, 8.3KJPN)
C=0.1335 (855/6404, 1000G_30x)
C=0.1370 (686/5008, 1000G)
C=0.1708 (765/4480, Estonian)
C=0.2421 (933/3854, ALSPAC)
C=0.2478 (919/3708, TWINSUK)
C=0.0495 (145/2930, KOREAN)
C=0.1244 (259/2082, HGDP_Stanford)
C=0.0524 (96/1832, Korea1K)
C=0.1137 (203/1786, HapMap)
C=0.243 (243/998, GoNL)
C=0.043 (34/790, PRJEB37584)
C=0.243 (146/600, NorthernSweden)
C=0.176 (38/216, Qatari)
C=0.116 (25/216, Vietnamese)
T=0.460 (57/124, SGDP_PRJ)
C=0.40 (16/40, GENOME_DK)
C=0.44 (14/32, Ancient Sardinia)
T=0.46 (11/24, Siberian)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
None
Publications
6 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 198932 T=0.773516 C=0.226484
European Sub 171520 T=0.758017 C=0.241983
African Sub 3986 T=0.9556 C=0.0444
African Others Sub 172 T=1.000 C=0.000
African American Sub 3814 T=0.9536 C=0.0464
Asian Sub 6326 T=0.9504 C=0.0496
East Asian Sub 4504 T=0.9496 C=0.0504
Other Asian Sub 1822 T=0.9523 C=0.0477
Latin American 1 Sub 460 T=0.800 C=0.200
Latin American 2 Sub 1008 T=0.8502 C=0.1498
South Asian Sub 4980 T=0.8064 C=0.1936
Other Sub 10652 T=0.82614 C=0.17386


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.843322 C=0.156678
Allele Frequency Aggregator Total Global 198838 T=0.773464 C=0.226536
Allele Frequency Aggregator European Sub 171444 T=0.757968 C=0.242032
Allele Frequency Aggregator Other Sub 10634 T=0.82594 C=0.17406
Allele Frequency Aggregator Asian Sub 6326 T=0.9504 C=0.0496
Allele Frequency Aggregator South Asian Sub 4980 T=0.8064 C=0.1936
Allele Frequency Aggregator African Sub 3986 T=0.9556 C=0.0444
Allele Frequency Aggregator Latin American 2 Sub 1008 T=0.8502 C=0.1498
Allele Frequency Aggregator Latin American 1 Sub 460 T=0.800 C=0.200
gnomAD - Genomes Global Study-wide 140124 T=0.837901 C=0.162099
gnomAD - Genomes European Sub 75876 T=0.76924 C=0.23076
gnomAD - Genomes African Sub 41992 T=0.95621 C=0.04379
gnomAD - Genomes American Sub 13646 T=0.83453 C=0.16547
gnomAD - Genomes Ashkenazi Jewish Sub 3324 T=0.8126 C=0.1874
gnomAD - Genomes East Asian Sub 3134 T=0.9553 C=0.0447
gnomAD - Genomes Other Sub 2152 T=0.8397 C=0.1603
The PAGE Study Global Study-wide 78696 T=0.90771 C=0.09229
The PAGE Study AfricanAmerican Sub 32514 T=0.95113 C=0.04887
The PAGE Study Mexican Sub 10810 T=0.87595 C=0.12405
The PAGE Study Asian Sub 8316 T=0.9580 C=0.0420
The PAGE Study PuertoRican Sub 7918 T=0.8381 C=0.1619
The PAGE Study NativeHawaiian Sub 4534 T=0.9255 C=0.0745
The PAGE Study Cuban Sub 4230 T=0.7809 C=0.2191
The PAGE Study Dominican Sub 3828 T=0.8673 C=0.1327
The PAGE Study CentralAmerican Sub 2448 T=0.8852 C=0.1148
The PAGE Study SouthAmerican Sub 1982 T=0.8597 C=0.1403
The PAGE Study NativeAmerican Sub 1260 T=0.8381 C=0.1619
The PAGE Study SouthAsian Sub 856 T=0.806 C=0.194
14KJPN JAPANESE Study-wide 28258 T=0.95976 C=0.04024
8.3KJPN JAPANESE Study-wide 16758 T=0.95966 C=0.04034
1000Genomes_30x Global Study-wide 6404 T=0.8665 C=0.1335
1000Genomes_30x African Sub 1786 T=0.9933 C=0.0067
1000Genomes_30x Europe Sub 1266 T=0.7433 C=0.2567
1000Genomes_30x South Asian Sub 1202 T=0.7504 C=0.2496
1000Genomes_30x East Asian Sub 1170 T=0.9496 C=0.0504
1000Genomes_30x American Sub 980 T=0.838 C=0.162
1000Genomes Global Study-wide 5008 T=0.8630 C=0.1370
1000Genomes African Sub 1322 T=0.9939 C=0.0061
1000Genomes East Asian Sub 1008 T=0.9464 C=0.0536
1000Genomes Europe Sub 1006 T=0.7425 C=0.2575
1000Genomes South Asian Sub 978 T=0.749 C=0.251
1000Genomes American Sub 694 T=0.827 C=0.173
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.8292 C=0.1708
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.7579 C=0.2421
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.7522 C=0.2478
KOREAN population from KRGDB KOREAN Study-wide 2930 T=0.9505 C=0.0495
HGDP-CEPH-db Supplement 1 Global Study-wide 2082 T=0.8756 C=0.1244
HGDP-CEPH-db Supplement 1 Est_Asia Sub 468 T=0.936 C=0.064
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 T=0.819 C=0.181
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 T=0.789 C=0.211
HGDP-CEPH-db Supplement 1 Europe Sub 320 T=0.769 C=0.231
HGDP-CEPH-db Supplement 1 Africa Sub 242 T=1.000 C=0.000
HGDP-CEPH-db Supplement 1 America Sub 216 T=1.000 C=0.000
HGDP-CEPH-db Supplement 1 Oceania Sub 72 T=0.92 C=0.08
Korean Genome Project KOREAN Study-wide 1832 T=0.9476 C=0.0524
HapMap Global Study-wide 1786 T=0.8863 C=0.1137
HapMap American Sub 770 T=0.827 C=0.173
HapMap African Sub 586 T=0.981 C=0.019
HapMap Asian Sub 254 T=0.969 C=0.031
HapMap Europe Sub 176 T=0.710 C=0.290
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.757 C=0.243
CNV burdens in cranial meningiomas Global Study-wide 790 T=0.957 C=0.043
CNV burdens in cranial meningiomas CRM Sub 790 T=0.957 C=0.043
Northern Sweden ACPOP Study-wide 600 T=0.757 C=0.243
Qatari Global Study-wide 216 T=0.824 C=0.176
A Vietnamese Genetic Variation Database Global Study-wide 216 T=0.884 C=0.116
SGDP_PRJ Global Study-wide 124 T=0.460 C=0.540
The Danish reference pan genome Danish Study-wide 40 T=0.60 C=0.40
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 32 T=0.56 C=0.44
Siberian Global Study-wide 24 T=0.46 C=0.54
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 7 NC_000007.14:g.150925074T>C
GRCh37.p13 chr 7 NC_000007.13:g.150622162T>C
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= C
GRCh38.p14 chr 7 NC_000007.14:g.150925074= NC_000007.14:g.150925074T>C
GRCh37.p13 chr 7 NC_000007.13:g.150622162= NC_000007.13:g.150622162T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

104 SubSNP, 24 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss4181606 Nov 05, 2001 (101)
2 CSHL-HAPMAP ss19713399 Feb 27, 2004 (120)
3 ABI ss43020917 Mar 14, 2006 (126)
4 ILLUMINA ss66809151 Dec 01, 2006 (127)
5 ILLUMINA ss67285905 Dec 01, 2006 (127)
6 ILLUMINA ss67688736 Dec 01, 2006 (127)
7 PERLEGEN ss69032139 May 17, 2007 (127)
8 ILLUMINA ss70764452 May 24, 2008 (130)
9 ILLUMINA ss71338832 May 17, 2007 (127)
10 ILLUMINA ss75810117 Dec 07, 2007 (129)
11 ILLUMINA ss79155534 Dec 14, 2007 (130)
12 KRIBB_YJKIM ss84133116 Dec 14, 2007 (130)
13 ILLUMINA ss122153533 Dec 01, 2009 (131)
14 ILLUMINA ss154249152 Dec 01, 2009 (131)
15 ILLUMINA ss159426058 Dec 01, 2009 (131)
16 COMPLETE_GENOMICS ss167259155 Jul 04, 2010 (132)
17 ILLUMINA ss171502911 Jul 04, 2010 (132)
18 ILLUMINA ss173543544 Jul 04, 2010 (132)
19 BCM-HGSC-SUB ss208055719 Jul 04, 2010 (132)
20 1000GENOMES ss234225232 Jul 15, 2010 (132)
21 BL ss254764862 May 09, 2011 (134)
22 GMI ss279588794 May 04, 2012 (137)
23 GMI ss285745884 Apr 25, 2013 (138)
24 PAGE_STUDY ss469415488 May 04, 2012 (137)
25 PAGE_STUDY ss469996415 May 04, 2012 (137)
26 EXOME_CHIP ss491408251 May 04, 2012 (137)
27 SSMP ss654813042 Apr 25, 2013 (138)
28 ILLUMINA ss780684121 Aug 21, 2014 (142)
29 ILLUMINA ss783357551 Aug 21, 2014 (142)
30 ILLUMINA ss825486052 Apr 01, 2015 (144)
31 EVA-GONL ss984958206 Aug 21, 2014 (142)
32 JMKIDD_LAB ss1075099914 Aug 21, 2014 (142)
33 1000GENOMES ss1327740231 Aug 21, 2014 (142)
34 DDI ss1431329535 Apr 01, 2015 (144)
35 EVA_GENOME_DK ss1582463253 Apr 01, 2015 (144)
36 EVA_DECODE ss1594548591 Apr 01, 2015 (144)
37 EVA_UK10K_ALSPAC ss1619532867 Apr 01, 2015 (144)
38 EVA_UK10K_TWINSUK ss1662526900 Apr 01, 2015 (144)
39 EVA_SVP ss1712998330 Apr 01, 2015 (144)
40 ILLUMINA ss1752671873 Sep 08, 2015 (146)
41 ILLUMINA ss1917824215 Feb 12, 2016 (147)
42 WEILL_CORNELL_DGM ss1928221070 Feb 12, 2016 (147)
43 ILLUMINA ss1946224978 Feb 12, 2016 (147)
44 ILLUMINA ss1959065694 Feb 12, 2016 (147)
45 AMU ss1966656831 Feb 12, 2016 (147)
46 JJLAB ss2024799495 Sep 14, 2016 (149)
47 USC_VALOUEV ss2153023114 Dec 20, 2016 (150)
48 HUMAN_LONGEVITY ss2299063590 Dec 20, 2016 (150)
49 ILLUMINA ss2634678706 Nov 08, 2017 (151)
50 GRF ss2708750727 Nov 08, 2017 (151)
51 GNOMAD ss2860848636 Nov 08, 2017 (151)
52 AFFY ss2985425377 Nov 08, 2017 (151)
53 AFFY ss2986055622 Nov 08, 2017 (151)
54 SWEGEN ss3002295284 Nov 08, 2017 (151)
55 ILLUMINA ss3022794889 Nov 08, 2017 (151)
56 BIOINF_KMB_FNS_UNIBA ss3026188785 Nov 08, 2017 (151)
57 CSHL ss3347917492 Nov 08, 2017 (151)
58 ILLUMINA ss3629947350 Oct 12, 2018 (152)
59 ILLUMINA ss3635148756 Oct 12, 2018 (152)
60 ILLUMINA ss3639367100 Oct 12, 2018 (152)
61 ILLUMINA ss3639712672 Oct 12, 2018 (152)
62 ILLUMINA ss3640856046 Oct 12, 2018 (152)
63 ILLUMINA ss3643665341 Oct 12, 2018 (152)
64 ILLUMINA ss3644958134 Oct 12, 2018 (152)
65 ILLUMINA ss3653331018 Oct 12, 2018 (152)
66 ILLUMINA ss3654186839 Oct 12, 2018 (152)
67 EGCUT_WGS ss3670034060 Jul 13, 2019 (153)
68 EVA_DECODE ss3720992129 Jul 13, 2019 (153)
69 ILLUMINA ss3726494878 Jul 13, 2019 (153)
70 ACPOP ss3735202931 Jul 13, 2019 (153)
71 ILLUMINA ss3744575408 Jul 13, 2019 (153)
72 ILLUMINA ss3745448695 Jul 13, 2019 (153)
73 EVA ss3767343948 Jul 13, 2019 (153)
74 PAGE_CC ss3771408575 Jul 13, 2019 (153)
75 ILLUMINA ss3772941381 Jul 13, 2019 (153)
76 KHV_HUMAN_GENOMES ss3810512654 Jul 13, 2019 (153)
77 EVA ss3830897596 Apr 26, 2020 (154)
78 EVA ss3838949128 Apr 26, 2020 (154)
79 EVA ss3844406714 Apr 26, 2020 (154)
80 HGDP ss3847895711 Apr 26, 2020 (154)
81 SGDP_PRJ ss3868724578 Apr 26, 2020 (154)
82 KRGDB ss3916116656 Apr 26, 2020 (154)
83 KOGIC ss3962873251 Apr 26, 2020 (154)
84 EVA ss3984597494 Apr 26, 2021 (155)
85 EVA ss3985330437 Apr 26, 2021 (155)
86 TOPMED ss4768969698 Apr 26, 2021 (155)
87 TOMMO_GENOMICS ss5186283521 Apr 26, 2021 (155)
88 1000G_HIGH_COVERAGE ss5275287780 Oct 13, 2022 (156)
89 EVA ss5315289665 Oct 13, 2022 (156)
90 EVA ss5377760549 Oct 13, 2022 (156)
91 HUGCELL_USP ss5472098554 Oct 13, 2022 (156)
92 EVA ss5509184664 Oct 13, 2022 (156)
93 1000G_HIGH_COVERAGE ss5564715813 Oct 13, 2022 (156)
94 SANFORD_IMAGENETICS ss5624679168 Oct 13, 2022 (156)
95 SANFORD_IMAGENETICS ss5644299469 Oct 13, 2022 (156)
96 TOMMO_GENOMICS ss5727500243 Oct 13, 2022 (156)
97 YY_MCH ss5809231850 Oct 13, 2022 (156)
98 EVA ss5823734646 Oct 13, 2022 (156)
99 EVA ss5847328795 Oct 13, 2022 (156)
100 EVA ss5848159520 Oct 13, 2022 (156)
101 EVA ss5856157451 Oct 13, 2022 (156)
102 EVA ss5861488637 Oct 13, 2022 (156)
103 EVA ss5973499928 Oct 13, 2022 (156)
104 EVA ss5979846263 Oct 13, 2022 (156)
105 1000Genomes NC_000007.13 - 150622162 Oct 12, 2018 (152)
106 1000Genomes_30x NC_000007.14 - 150925074 Oct 13, 2022 (156)
107 The Avon Longitudinal Study of Parents and Children NC_000007.13 - 150622162 Oct 12, 2018 (152)
108 Genetic variation in the Estonian population NC_000007.13 - 150622162 Oct 12, 2018 (152)
109 The Danish reference pan genome NC_000007.13 - 150622162 Apr 26, 2020 (154)
110 gnomAD - Genomes NC_000007.14 - 150925074 Apr 26, 2021 (155)
111 Genome of the Netherlands Release 5 NC_000007.13 - 150622162 Apr 26, 2020 (154)
112 HGDP-CEPH-db Supplement 1 NC_000007.12 - 150253095 Apr 26, 2020 (154)
113 HapMap NC_000007.14 - 150925074 Apr 26, 2020 (154)
114 KOREAN population from KRGDB NC_000007.13 - 150622162 Apr 26, 2020 (154)
115 Korean Genome Project NC_000007.14 - 150925074 Apr 26, 2020 (154)
116 Northern Sweden NC_000007.13 - 150622162 Jul 13, 2019 (153)
117 The PAGE Study NC_000007.14 - 150925074 Jul 13, 2019 (153)
118 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000007.13 - 150622162 Apr 26, 2021 (155)
119 CNV burdens in cranial meningiomas NC_000007.13 - 150622162 Apr 26, 2021 (155)
120 Qatari NC_000007.13 - 150622162 Apr 26, 2020 (154)
121 SGDP_PRJ NC_000007.13 - 150622162 Apr 26, 2020 (154)
122 Siberian NC_000007.13 - 150622162 Apr 26, 2020 (154)
123 8.3KJPN NC_000007.13 - 150622162 Apr 26, 2021 (155)
124 14KJPN NC_000007.14 - 150925074 Oct 13, 2022 (156)
125 TopMed NC_000007.14 - 150925074 Apr 26, 2021 (155)
126 UK 10K study - Twins NC_000007.13 - 150622162 Oct 12, 2018 (152)
127 A Vietnamese Genetic Variation Database NC_000007.13 - 150622162 Jul 13, 2019 (153)
128 ALFA NC_000007.14 - 150925074 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs58161693 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss3639367100, ss3639712672 NC_000007.11:150059809:T:C NC_000007.14:150925073:T:C (self)
573603, ss167259155, ss208055719, ss254764862, ss279588794, ss285745884, ss825486052, ss1594548591, ss1712998330, ss3643665341, ss3847895711 NC_000007.12:150253094:T:C NC_000007.14:150925073:T:C (self)
39806241, 22150507, 15772308, 8628191, 9883628, 23294050, 8487796, 556364, 146927, 10263000, 20741558, 5539468, 44252828, 22150507, 4930305, ss234225232, ss491408251, ss654813042, ss780684121, ss783357551, ss984958206, ss1075099914, ss1327740231, ss1431329535, ss1582463253, ss1619532867, ss1662526900, ss1752671873, ss1917824215, ss1928221070, ss1946224978, ss1959065694, ss1966656831, ss2024799495, ss2153023114, ss2634678706, ss2708750727, ss2860848636, ss2985425377, ss2986055622, ss3002295284, ss3022794889, ss3347917492, ss3629947350, ss3635148756, ss3640856046, ss3644958134, ss3653331018, ss3654186839, ss3670034060, ss3735202931, ss3744575408, ss3745448695, ss3767343948, ss3772941381, ss3830897596, ss3838949128, ss3868724578, ss3916116656, ss3984597494, ss3985330437, ss5186283521, ss5315289665, ss5377760549, ss5509184664, ss5624679168, ss5644299469, ss5823734646, ss5847328795, ss5848159520, ss5973499928, ss5979846263 NC_000007.13:150622161:T:C NC_000007.14:150925073:T:C (self)
52241748, 281077669, 3523318, 19251252, 630044, 61337347, 606347257, 9697936906, ss2299063590, ss3026188785, ss3720992129, ss3726494878, ss3771408575, ss3810512654, ss3844406714, ss3962873251, ss4768969698, ss5275287780, ss5472098554, ss5564715813, ss5727500243, ss5809231850, ss5856157451, ss5861488637 NC_000007.14:150925073:T:C NC_000007.14:150925073:T:C (self)
ss19713399 NT_007914.13:11198177:T:C NC_000007.14:150925073:T:C (self)
ss4181606, ss43020917, ss66809151, ss67285905, ss67688736, ss69032139, ss70764452, ss71338832, ss75810117, ss79155534, ss84133116, ss122153533, ss154249152, ss159426058, ss171502911, ss173543544, ss469415488, ss469996415 NT_007914.15:11217784:T:C NC_000007.14:150925073:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

6 citations for rs2968864
PMID Title Author Year Journal
19305408 Common variants at ten loci influence QT interval duration in the QTGEN Study. Newton-Cheh C et al. 2009 Nature genetics
20407125 Systems pharmacology of arrhythmias. Berger SI et al. 2010 Science signaling
22912591 Fine-mapping and initial characterization of QT interval loci in African Americans. Avery CL et al. 2012 PLoS genetics
24846176 Genome-wide identification of expression quantitative trait loci (eQTLs) in human heart. Koopmann TT et al. 2014 PloS one
25166880 Evidence of heterogeneity by race/ethnicity in genetic determinants of QT interval. Seyerle AA et al. 2014 Epidemiology (Cambridge, Mass.)
27016575 Racial Differences in Electrocardiographic Characteristics and Prognostic Significance in Whites Versus Asians. Santhanakrishnan R et al. 2016 Journal of the American Heart Association
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07