Name: rs28910270
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs28910270

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr3:142556511 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.017866 (4729/264690, TOPMED)
T=0.018137 (4557/251250, GnomAD_exome)
T=0.017385 (2438/140232, GnomAD) (+ 17 more)
T=0.018875 (2283/120952, ExAC)
T=0.02003 (1399/69848, ALFA)
T=0.02045 (266/13006, GO-ESP)
T=0.0170 (109/6404, 1000G_30x)
T=0.0184 (92/5008, 1000G)
T=0.0179 (80/4480, Estonian)
T=0.0187 (72/3854, ALSPAC)
T=0.0221 (82/3708, TWINSUK)
T=0.0275 (49/1784, HapMap)
T=0.013 (13/998, GoNL)
T=0.013 (8/600, NorthernSweden)
T=0.015 (8/534, MGP)
T=0.007 (2/304, FINRISK)
T=0.032 (7/216, Qatari)
T=0.03 (1/40, GENOME_DK)
C=0.50 (8/16, SGDP_PRJ)
T=0.50 (8/16, SGDP_PRJ)

Clinical Significance: Reported in ClinVar
Gene : Consequence: ATR : Synonymous Variant
Publications: 2 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	86204	C=0.98058	T=0.01942
European	Sub	62394	C=0.98102	T=0.01898
African	Sub	12340	C=0.97804	T=0.02196
African Others	Sub	434	C=0.975	T=0.025
African American	Sub	11906	C=0.97816	T=0.02184
Asian	Sub	194	C=1.000	T=0.000
East Asian	Sub	136	C=1.000	T=0.000
Other Asian	Sub	58	C=1.00	T=0.00
Latin American 1	Sub	536	C=0.989	T=0.011
Latin American 2	Sub	772	C=0.988	T=0.012
South Asian	Sub	116	C=0.957	T=0.043
Other	Sub	9852	C=0.9798	T=0.0202

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	C=0.982134	T=0.017866
gnomAD - Exomes	Global	Study-wide	251250	C=0.981863	T=0.018137
gnomAD - Exomes	European	Sub	135268	C=0.984061	T=0.015939
gnomAD - Exomes	Asian	Sub	48982	C=0.97350	T=0.02650
gnomAD - Exomes	American	Sub	34556	C=0.98897	T=0.01103
gnomAD - Exomes	African	Sub	16242	C=0.98116	T=0.01884
gnomAD - Exomes	Ashkenazi Jewish	Sub	10078	C=0.97043	T=0.02957
gnomAD - Exomes	Other	Sub	6124	C=0.9807	T=0.0193
gnomAD - Genomes	Global	Study-wide	140232	C=0.982615	T=0.017385
gnomAD - Genomes	European	Sub	75942	C=0.98384	T=0.01616
gnomAD - Genomes	African	Sub	42028	C=0.97868	T=0.02132
gnomAD - Genomes	American	Sub	13652	C=0.98733	T=0.01267
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	C=0.9669	T=0.0331
gnomAD - Genomes	East Asian	Sub	3134	C=1.0000	T=0.0000
gnomAD - Genomes	Other	Sub	2154	C=0.9851	T=0.0149
ExAC	Global	Study-wide	120952	C=0.981125	T=0.018875
ExAC	Europe	Sub	73118	C=0.98379	T=0.01621
ExAC	Asian	Sub	25110	C=0.97025	T=0.02975
ExAC	American	Sub	11556	C=0.98962	T=0.01038
ExAC	African	Sub	10262	C=0.97954	T=0.02046
ExAC	Other	Sub	906	C=0.977	T=0.023
Allele Frequency Aggregator	Total	Global	69848	C=0.97997	T=0.02003
Allele Frequency Aggregator	European	Sub	52308	C=0.98040	T=0.01960
Allele Frequency Aggregator	Other	Sub	8418	C=0.9792	T=0.0208
Allele Frequency Aggregator	African	Sub	7504	C=0.9761	T=0.0239
Allele Frequency Aggregator	Latin American 2	Sub	772	C=0.988	T=0.012
Allele Frequency Aggregator	Latin American 1	Sub	536	C=0.989	T=0.011
Allele Frequency Aggregator	Asian	Sub	194	C=1.000	T=0.000
Allele Frequency Aggregator	South Asian	Sub	116	C=0.957	T=0.043
GO Exome Sequencing Project	Global	Study-wide	13006	C=0.97955	T=0.02045
GO Exome Sequencing Project	European American	Sub	8600	C=0.9800	T=0.0200
GO Exome Sequencing Project	African American	Sub	4406	C=0.9787	T=0.0213
1000Genomes_30x	Global	Study-wide	6404	C=0.9830	T=0.0170
1000Genomes_30x	African	Sub	1786	C=0.9894	T=0.0106
1000Genomes_30x	Europe	Sub	1266	C=0.9755	T=0.0245
1000Genomes_30x	South Asian	Sub	1202	C=0.9584	T=0.0416
1000Genomes_30x	East Asian	Sub	1170	C=1.0000	T=0.0000
1000Genomes_30x	American	Sub	980	C=0.991	T=0.009
1000Genomes	Global	Study-wide	5008	C=0.9816	T=0.0184
1000Genomes	African	Sub	1322	C=0.9871	T=0.0129
1000Genomes	East Asian	Sub	1008	C=1.0000	T=0.0000
1000Genomes	Europe	Sub	1006	C=0.9761	T=0.0239
1000Genomes	South Asian	Sub	978	C=0.956	T=0.044
1000Genomes	American	Sub	694	C=0.988	T=0.012
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.9821	T=0.0179
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.9813	T=0.0187
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.9779	T=0.0221
HapMap	Global	Study-wide	1784	C=0.9725	T=0.0275
HapMap	American	Sub	760	C=0.978	T=0.022
HapMap	African	Sub	684	C=0.966	T=0.034
HapMap	Europe	Sub	174	C=0.966	T=0.034
HapMap	Asian	Sub	166	C=0.982	T=0.018
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.987	T=0.013
Northern Sweden	ACPOP	Study-wide	600	C=0.987	T=0.013
Medical Genome Project healthy controls from Spanish population	Spanish controls	Study-wide	534	C=0.985	T=0.015
FINRISK	Finnish from FINRISK project	Study-wide	304	C=0.993	T=0.007
Qatari	Global	Study-wide	216	C=0.968	T=0.032
The Danish reference pan genome	Danish	Study-wide	40	C=0.97	T=0.03
SGDP_PRJ	Global	Study-wide	16	C=0.50	T=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 3	NC_000003.12:g.142556511C>T
GRCh37.p13 chr 3	NC_000003.11:g.142275353C>T
ATR RefSeqGene (LRG_1403)	NG_008951.1:g.27316G>A

Gene: ATR, ATR serine/threonine kinase (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
ATR transcript variant 1	NM_001184.4:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform 1	NP_001175.2:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant 2	NM_001354579.2:c.1758G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform 2	NP_001341508.1:p.Glu586=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X1	XM_011512924.2:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X1	XP_011511226.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X2	XM_047448360.1:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X2	XP_047304316.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X3	XM_047448361.1:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X3	XP_047304317.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X4	XM_011512925.2:c.1758G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X4	XP_011511227.1:p.Glu586=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X5	XM_047448362.1:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X5	XP_047304318.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X6	XM_047448363.1:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X6	XP_047304319.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant
ATR transcript variant X7	XM_047448364.1:c.1950G>A	E [GAG] > E [GAA]	Coding Sequence Variant
serine/threonine-protein kinase ATR isoform X7	XP_047304320.1:p.Glu650=	E (Glu) > E (Glu)	Synonymous Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: T (allele ID: 167815 )

ClinVar Accession	Disease Names	Clinical Significance
RCV000145294.5	not specified	Benign
RCV000398572.4	Seckel syndrome 1	Benign
RCV000588919.11	not provided	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	T
GRCh38.p14 chr 3	NC_000003.12:g.142556511=	NC_000003.12:g.142556511C>T
GRCh37.p13 chr 3	NC_000003.11:g.142275353=	NC_000003.11:g.142275353C>T
ATR RefSeqGene (LRG_1403)	NG_008951.1:g.27316=	NG_008951.1:g.27316G>A
ATR transcript variant 1	NM_001184.4:c.1950=	NM_001184.4:c.1950G>A
ATR transcript variant 1	NM_001184.3:c.1950=	NM_001184.3:c.1950G>A
ATR transcript variant 2	NM_001354579.2:c.1758=	NM_001354579.2:c.1758G>A
ATR transcript variant 2	NM_001354579.1:c.1758=	NM_001354579.1:c.1758G>A
ATR transcript variant X1	XM_011512924.2:c.1950=	XM_011512924.2:c.1950G>A
ATR transcript variant X1	XM_011512924.1:c.1950=	XM_011512924.1:c.1950G>A
ATR transcript variant X4	XM_011512925.2:c.1758=	XM_011512925.2:c.1758G>A
ATR transcript variant X4	XM_011512925.1:c.1758=	XM_011512925.1:c.1758G>A
ATR transcript variant X2	XM_047448360.1:c.1950=	XM_047448360.1:c.1950G>A
ATR transcript variant X3	XM_047448361.1:c.1950=	XM_047448361.1:c.1950G>A
ATR transcript variant X6	XM_047448363.1:c.1950=	XM_047448363.1:c.1950G>A
ATR transcript variant X5	XM_047448362.1:c.1950=	XM_047448362.1:c.1950G>A
ATR transcript variant X7	XM_047448364.1:c.1950=	XM_047448364.1:c.1950G>A
serine/threonine-protein kinase ATR isoform 1	NP_001175.2:p.Glu650=	NP_001175.2:p.Glu650=
serine/threonine-protein kinase ATR isoform 2	NP_001341508.1:p.Glu586=	NP_001341508.1:p.Glu586=
serine/threonine-protein kinase ATR isoform X1	XP_011511226.1:p.Glu650=	XP_011511226.1:p.Glu650=
serine/threonine-protein kinase ATR isoform X4	XP_011511227.1:p.Glu586=	XP_011511227.1:p.Glu586=
serine/threonine-protein kinase ATR isoform X2	XP_047304316.1:p.Glu650=	XP_047304316.1:p.Glu650=
serine/threonine-protein kinase ATR isoform X3	XP_047304317.1:p.Glu650=	XP_047304317.1:p.Glu650=
serine/threonine-protein kinase ATR isoform X6	XP_047304319.1:p.Glu650=	XP_047304319.1:p.Glu650=
serine/threonine-protein kinase ATR isoform X5	XP_047304318.1:p.Glu650=	XP_047304318.1:p.Glu650=
serine/threonine-protein kinase ATR isoform X7	XP_047304320.1:p.Glu650=	XP_047304320.1:p.Glu650=

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

71 SubSNP, 19 Frequency, 3 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	ICRCG	ss35529074	May 24, 2005 (125)
2	SI_EXO	ss71646957	May 18, 2007 (127)
3	CANCER-GENOME	ss74801362	Dec 07, 2007 (129)
4	ILLUMINA	ss74975413	Dec 07, 2007 (129)
5	KRIBB_YJKIM	ss119907120	Dec 01, 2009 (131)
6	ILLUMINA	ss173525130	Jul 04, 2010 (132)
7	BUSHMAN	ss203277012	Jul 04, 2010 (132)
8	1000GENOMES	ss232061199	Jul 14, 2010 (132)
9	NHLBI-ESP	ss342149292	May 09, 2011 (134)
10	ILLUMINA	ss483789162	May 04, 2012 (137)
11	ILLUMINA	ss484473856	May 04, 2012 (137)
12	1000GENOMES	ss490875474	May 04, 2012 (137)
13	CLINSEQ_SNP	ss491843570	May 04, 2012 (137)
14	ILLUMINA	ss535987518	Sep 08, 2015 (146)
15	SSMP	ss650719767	Apr 25, 2013 (138)
16	ILLUMINA	ss779516751	Sep 08, 2015 (146)
17	ILLUMINA	ss782338137	Sep 08, 2015 (146)
18	ILLUMINA	ss834987181	Sep 08, 2015 (146)
19	EVA-GONL	ss979241268	Aug 21, 2014 (142)
20	JMKIDD_LAB	ss1067455969	Aug 21, 2014 (142)
21	JMKIDD_LAB	ss1070889501	Aug 21, 2014 (142)
22	1000GENOMES	ss1306473402	Aug 21, 2014 (142)
23	CLINVAR	ss1457622496	Nov 23, 2014 (142)
24	EVA_GENOME_DK	ss1580212199	Apr 01, 2015 (144)
25	EVA_FINRISK	ss1584030907	Apr 01, 2015 (144)
26	EVA_DECODE	ss1588729892	Apr 01, 2015 (144)
27	EVA_UK10K_ALSPAC	ss1608379502	Apr 01, 2015 (144)
28	EVA_UK10K_TWINSUK	ss1651373535	Apr 01, 2015 (144)
29	EVA_EXAC	ss1687244249	Apr 01, 2015 (144)
30	EVA_MGP	ss1711037069	Apr 01, 2015 (144)
31	EVA_SVP	ss1712618083	Apr 01, 2015 (144)
32	WEILL_CORNELL_DGM	ss1922464691	Feb 12, 2016 (147)
33	JJLAB	ss2021802341	Sep 14, 2016 (149)
34	HUMAN_LONGEVITY	ss2256478558	Dec 20, 2016 (150)
35	ILLUMINA	ss2634021406	Nov 08, 2017 (151)
36	ILLUMINA	ss2635125164	Nov 08, 2017 (151)
37	GNOMAD	ss2734122753	Nov 08, 2017 (151)
38	GNOMAD	ss2747116850	Nov 08, 2017 (151)
39	GNOMAD	ss2800034406	Nov 08, 2017 (151)
40	SWEGEN	ss2993323281	Nov 08, 2017 (151)
41	ILLUMINA	ss3628793729	Oct 12, 2018 (152)
42	ILLUMINA	ss3631963625	Oct 12, 2018 (152)
43	ILLUMINA	ss3638446382	Oct 12, 2018 (152)
44	ILLUMINA	ss3643400996	Oct 12, 2018 (152)
45	OMUKHERJEE_ADBS	ss3646294214	Oct 12, 2018 (152)
46	EGCUT_WGS	ss3661246954	Jul 13, 2019 (153)
47	EVA_DECODE	ss3710441280	Jul 13, 2019 (153)
48	ACPOP	ss3730416747	Jul 13, 2019 (153)
49	EVA	ss3823964034	Apr 25, 2020 (154)
50	EVA	ss3825644313	Apr 25, 2020 (154)
51	EVA	ss3828113118	Apr 25, 2020 (154)
52	SGDP_PRJ	ss3857134221	Apr 25, 2020 (154)
53	FSA-LAB	ss3984264996	Apr 26, 2021 (155)
54	EVA	ss3986257708	Apr 26, 2021 (155)
55	EVA	ss4017109901	Apr 26, 2021 (155)
56	TOPMED	ss4586380538	Apr 26, 2021 (155)
57	EVA	ss5237640648	Oct 12, 2022 (156)
58	1000G_HIGH_COVERAGE	ss5256300863	Oct 12, 2022 (156)
59	TRAN_CS_UWATERLOO	ss5314408494	Oct 12, 2022 (156)
60	EVA	ss5343774988	Oct 12, 2022 (156)
61	CSS-BFX	ss5442108108	Oct 12, 2022 (156)
62	HUGCELL_USP	ss5455411150	Oct 12, 2022 (156)
63	EVA	ss5507230462	Oct 12, 2022 (156)
64	1000G_HIGH_COVERAGE	ss5535882499	Oct 12, 2022 (156)
65	SANFORD_IMAGENETICS	ss5633343441	Oct 12, 2022 (156)
66	EVA	ss5826584844	Oct 12, 2022 (156)
67	EVA	ss5848594628	Oct 12, 2022 (156)
68	EVA	ss5871318305	Oct 12, 2022 (156)
69	EVA	ss5935682692	Oct 12, 2022 (156)
70	EVA	ss5936522816	Oct 12, 2022 (156)
71	EVA	ss5961700528	Oct 12, 2022 (156)
72	1000Genomes	NC_000003.11 - 142275353	Oct 12, 2018 (152)
73	1000Genomes_30x	NC_000003.12 - 142556511	Oct 12, 2022 (156)
74	The Avon Longitudinal Study of Parents and Children	NC_000003.11 - 142275353	Oct 12, 2018 (152)
75	Genetic variation in the Estonian population	NC_000003.11 - 142275353	Oct 12, 2018 (152)
76	ExAC	NC_000003.11 - 142275353	Oct 12, 2018 (152)
77	FINRISK	NC_000003.11 - 142275353	Apr 25, 2020 (154)
78	The Danish reference pan genome	NC_000003.11 - 142275353	Apr 25, 2020 (154)
79	gnomAD - Genomes	NC_000003.12 - 142556511	Apr 26, 2021 (155)
80	gnomAD - Exomes	NC_000003.11 - 142275353	Jul 13, 2019 (153)
81	GO Exome Sequencing Project	NC_000003.11 - 142275353	Oct 12, 2018 (152)
82	Genome of the Netherlands Release 5	NC_000003.11 - 142275353	Apr 25, 2020 (154)
83	HapMap	NC_000003.12 - 142556511	Apr 25, 2020 (154)
84	Medical Genome Project healthy controls from Spanish population	NC_000003.11 - 142275353	Apr 25, 2020 (154)
85	Northern Sweden	NC_000003.11 - 142275353	Jul 13, 2019 (153)
86	Qatari	NC_000003.11 - 142275353	Apr 25, 2020 (154)
87	SGDP_PRJ	NC_000003.11 - 142275353	Apr 25, 2020 (154)
88	TopMed	NC_000003.12 - 142556511	Apr 26, 2021 (155)
89	UK 10K study - Twins	NC_000003.11 - 142275353	Oct 12, 2018 (152)
90	ALFA	NC_000003.12 - 142556511	Apr 26, 2021 (155)
91	ClinVar	RCV000145294.5	Oct 12, 2022 (156)
92	ClinVar	RCV000398572.4	Oct 12, 2022 (156)
93	ClinVar	RCV000588919.11	Oct 12, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss203277012, ss484473856, ss491843570, ss1588729892, ss1712618083, ss2635125164, ss3643400996	NC_000003.10:143758042:C:T	NC_000003.12:142556510:C:T	(self)
17747406, 9883928, 6985202, 7186547, 27368, 6377138, 3212420, 422324, 4340908, 152829, 3701612, 4506621, 9151201, 9883928, ss232061199, ss342149292, ss483789162, ss490875474, ss535987518, ss650719767, ss779516751, ss782338137, ss834987181, ss979241268, ss1067455969, ss1070889501, ss1306473402, ss1580212199, ss1584030907, ss1608379502, ss1651373535, ss1687244249, ss1711037069, ss1922464691, ss2021802341, ss2634021406, ss2734122753, ss2747116850, ss2800034406, ss2993323281, ss3628793729, ss3631963625, ss3638446382, ss3646294214, ss3661246954, ss3730416747, ss3823964034, ss3825644313, ss3828113118, ss3857134221, ss3984264996, ss3986257708, ss4017109901, ss5343774988, ss5442108108, ss5507230462, ss5633343441, ss5826584844, ss5848594628, ss5935682692, ss5936522816, ss5961700528	NC_000003.11:142275352:C:T	NC_000003.12:142556510:C:T	(self)
RCV000145294.5, RCV000398572.4, RCV000588919.11, 23408434, 126108337, 2472316, 423758093, 10084695789, ss1457622496, ss2256478558, ss3710441280, ss4586380538, ss5237640648, ss5256300863, ss5314408494, ss5455411150, ss5535882499, ss5871318305	NC_000003.12:142556510:C:T	NC_000003.12:142556510:C:T	(self)
ss35529074, ss71646957, ss74801362, ss74975413, ss119907120, ss173525130	NT_005612.16:48770498:C:T	NC_000003.12:142556510:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

2 citations for rs28910270

PMID	Title	Author	Year	Journal
17010193	Mutation analysis and characterization of ATR sequence variants in breast cancer cases from high-risk French Canadian breast/ovarian cancer families.	Durocher F et al.	2006	BMC cancer
18414213	ACMG recommendations for standards for interpretation and reporting of sequence variations: Revisions 2007.	Richards CS et al.	2008	Genetics in medicine

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs28910270