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Reference SNP (refSNP) Cluster Report: rs267243332                 
RefSNP
Organism:cow (Bos taurus)
Molecule Type:Genomic
Created/Updated in build:137/140
Map to Genome Build:103/Weight
Validation Status:byFreq
Allele
Variation Class:SNV:
single nucleotide variation
RefSNP Alleles:C/T (FWD)
Allele Origin:
Ancestral Allele:Not available
MAF/MinorAlleleCount:NA
MAF Source:
Links
SNP Details are organized in the following sections:
GeneView Map Submission Fasta Resource Diversity Validation

  Integrated Maps (Hint: click on 'Chr Pos' or 'Contig Pos' column value to see variation in NCBI sequence viewer) back to top

  GeneView back to top

GeneView via direct blast against RefSeq sequences (used when no gene model is available): N/A


  Submitter records for this RefSNP Cluster back to top
The submission ss530855948 has the longest flanking sequence of all cluster members and was used to instantiate sequence for rs267243332 during BLAST analysis for the current build.


NCBI
Assay ID
Handle|Submitter IDValidation
Status
ss to rs
Orientation
/Strand
Alleles5' Near Seq 30 bp3' Near Seq 30 bpEntry
Date
Update
Date
Build
Added
Molecule
Type
Freq
Warning
Ancestral
Allele
Success
Rate
ss530855948JCASWELL|TAP# 1734fwd/BC/Tgtagcgagaggggtctgagaagggccctgaaaattcctggctgtttctaagccactctag06/15/1206/15/12137Genomicunknown

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|rs267243332|allelePos=65|totalLen=131|taxid=9913|snpclass=1|alleles='C/T'|mol=Genomic|build=137
 TTGATGCTCC TGAGAAGCCT GCGCTGAGTC CTTAGTAGCG AGAGGGGTCT GAGAAGGGCC
 CTGA
 Y
 AAATTCCTGG CTGTTTCTAA GCCACTCTAG TGAGTCCGAG CTTCTGAGCC CATCTCCTCA
 TTGGTT

  NCBI Resource Links back to top
Submitter-Referenced
GenBank
L13373.1
dbSNP Blast Analysis

  Population Diversity (in rs orientation) back to top
There is no frequency data.

  Validation Summary: back to top
Validation statusMarker displays
Mendelian segregation
PCR results confirmed
in multiple reactions
Homozygotes detected
in individual genotype data
byFreqUNKNOWNUNKNOWNUNKNOWN

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