dbSNP Short Genetic Variations
Welcome to the Reference SNP (rs) Report
All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.
Reference SNP (rs) Report
This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.
rs151169176
Current Build 156
Released September 21, 2022
- Organism
- Homo sapiens
- Position
-
chr11:45965540 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
- Alleles
- A>T
- Variation Type
- SNV Single Nucleotide Variation
- Frequency
-
T=0.005897 (1561/264690, TOPMED)T=0.006789 (1637/241110, GnomAD_exome)T=0.005573 (781/140142, GnomAD) (+ 16 more)
- Clinical Significance
- Reported in ClinVar
- Gene : Consequence
- PHF21A : Synonymous Variant
- Publications
- 0 citations
- Genomic View
- See rs on genome
ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.
Release Version: 20230706150541
| Population | Group | Sample Size | Ref Allele | Alt Allele |
|---|---|---|---|---|
| Total | Global | 42614 | A=0.99176 | T=0.00824 |
| European | Sub | 31780 | A=0.99176 | T=0.00824 |
| African | Sub | 3560 | A=0.9969 | T=0.0031 |
| African Others | Sub | 122 | A=1.000 | T=0.000 |
| African American | Sub | 3438 | A=0.9968 | T=0.0032 |
| Asian | Sub | 168 | A=1.000 | T=0.000 |
| East Asian | Sub | 112 | A=1.000 | T=0.000 |
| Other Asian | Sub | 56 | A=1.00 | T=0.00 |
| Latin American 1 | Sub | 500 | A=0.990 | T=0.010 |
| Latin American 2 | Sub | 628 | A=0.997 | T=0.003 |
| South Asian | Sub | 98 | A=0.99 | T=0.01 |
| Other | Sub | 5880 | A=0.9881 | T=0.0119 |
Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").
Download| Study | Population | Group | Sample Size | Ref Allele | Alt Allele |
|---|---|---|---|---|---|
| TopMed | Global | Study-wide | 264690 | A=0.994103 | T=0.005897 |
| gnomAD - Exomes | Global | Study-wide | 241110 | A=0.993211 | T=0.006789 |
| gnomAD - Exomes | European | Sub | 130012 | A=0.993693 | T=0.006307 |
| gnomAD - Exomes | Asian | Sub | 46130 | A=0.99330 | T=0.00670 |
| gnomAD - Exomes | American | Sub | 33850 | A=0.99604 | T=0.00396 |
| gnomAD - Exomes | African | Sub | 16166 | A=0.99913 | T=0.00087 |
| gnomAD - Exomes | Ashkenazi Jewish | Sub | 9056 | A=0.9669 | T=0.0331 |
| gnomAD - Exomes | Other | Sub | 5896 | A=0.9898 | T=0.0102 |
| gnomAD - Genomes | Global | Study-wide | 140142 | A=0.994427 | T=0.005573 |
| gnomAD - Genomes | European | Sub | 75900 | A=0.99375 | T=0.00625 |
| gnomAD - Genomes | African | Sub | 42010 | A=0.99841 | T=0.00159 |
| gnomAD - Genomes | American | Sub | 13636 | A=0.99333 | T=0.00667 |
| gnomAD - Genomes | Ashkenazi Jewish | Sub | 3316 | A=0.9596 | T=0.0404 |
| gnomAD - Genomes | East Asian | Sub | 3128 | A=1.0000 | T=0.0000 |
| gnomAD - Genomes | Other | Sub | 2152 | A=0.9930 | T=0.0070 |
| ExAC | Global | Study-wide | 111908 | A=0.993101 | T=0.006899 |
| ExAC | Europe | Sub | 70048 | A=0.99166 | T=0.00834 |
| ExAC | Asian | Sub | 19954 | A=0.99328 | T=0.00672 |
| ExAC | American | Sub | 11104 | A=0.99613 | T=0.00387 |
| ExAC | African | Sub | 9992 | A=0.9993 | T=0.0007 |
| ExAC | Other | Sub | 810 | A=0.995 | T=0.005 |
| Allele Frequency Aggregator | Total | Global | 42614 | A=0.99176 | T=0.00824 |
| Allele Frequency Aggregator | European | Sub | 31780 | A=0.99176 | T=0.00824 |
| Allele Frequency Aggregator | Other | Sub | 5880 | A=0.9881 | T=0.0119 |
| Allele Frequency Aggregator | African | Sub | 3560 | A=0.9969 | T=0.0031 |
| Allele Frequency Aggregator | Latin American 2 | Sub | 628 | A=0.997 | T=0.003 |
| Allele Frequency Aggregator | Latin American 1 | Sub | 500 | A=0.990 | T=0.010 |
| Allele Frequency Aggregator | Asian | Sub | 168 | A=1.000 | T=0.000 |
| Allele Frequency Aggregator | South Asian | Sub | 98 | A=0.99 | T=0.01 |
| GO Exome Sequencing Project | Global | Study-wide | 13002 | A=0.99485 | T=0.00515 |
| GO Exome Sequencing Project | European American | Sub | 8598 | A=0.9929 | T=0.0071 |
| GO Exome Sequencing Project | African American | Sub | 4404 | A=0.9986 | T=0.0014 |
| 1000Genomes_30x | Global | Study-wide | 6404 | A=0.9972 | T=0.0028 |
| 1000Genomes_30x | African | Sub | 1786 | A=1.0000 | T=0.0000 |
| 1000Genomes_30x | Europe | Sub | 1266 | A=0.9961 | T=0.0039 |
| 1000Genomes_30x | South Asian | Sub | 1202 | A=0.9942 | T=0.0058 |
| 1000Genomes_30x | East Asian | Sub | 1170 | A=1.0000 | T=0.0000 |
| 1000Genomes_30x | American | Sub | 980 | A=0.994 | T=0.006 |
| 1000Genomes | Global | Study-wide | 5008 | A=0.9970 | T=0.0030 |
| 1000Genomes | African | Sub | 1322 | A=1.0000 | T=0.0000 |
| 1000Genomes | East Asian | Sub | 1008 | A=1.0000 | T=0.0000 |
| 1000Genomes | Europe | Sub | 1006 | A=0.9960 | T=0.0040 |
| 1000Genomes | South Asian | Sub | 978 | A=0.994 | T=0.006 |
| 1000Genomes | American | Sub | 694 | A=0.993 | T=0.007 |
| Genetic variation in the Estonian population | Estonian | Study-wide | 4480 | A=0.9971 | T=0.0029 |
| The Avon Longitudinal Study of Parents and Children | PARENT AND CHILD COHORT | Study-wide | 3854 | A=0.9958 | T=0.0042 |
| UK 10K study - Twins | TWIN COHORT | Study-wide | 3708 | A=0.9941 | T=0.0059 |
| Genome of the Netherlands Release 5 | Genome of the Netherlands | Study-wide | 998 | A=0.990 | T=0.010 |
| Northern Sweden | ACPOP | Study-wide | 600 | A=0.997 | T=0.003 |
| Medical Genome Project healthy controls from Spanish population | Spanish controls | Study-wide | 534 | A=0.994 | T=0.006 |
| FINRISK | Finnish from FINRISK project | Study-wide | 300 | A=0.993 | T=0.007 |
| Qatari | Global | Study-wide | 216 | A=0.958 | T=0.042 |
| A Vietnamese Genetic Variation Database | Global | Study-wide | 214 | A=0.995 | T=0.005 |
| The Danish reference pan genome | Danish | Study-wide | 40 | A=0.97 | T=0.03 |
| SGDP_PRJ | Global | Study-wide | 8 | A=0.4 | T=0.6 |
Help
Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.
Genomic Placements
| Sequence name | Change |
|---|---|
| GRCh38.p14 chr 11 | NC_000011.10:g.45965540A>T |
| GRCh37.p13 chr 11 | NC_000011.9:g.45987091A>T |
Gene: PHF21A, PHD finger protein 21A
(minus strand)
| Molecule type | Change | Amino acid[Codon] | SO Term |
|---|---|---|---|
| PHF21A transcript variant 7 | NM_001352029.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform b | NP_001338958.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 6 | NM_001352028.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform b | NP_001338957.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 2 | NM_016621.5:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform b | NP_057705.3:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 1 | NM_001101802.3:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform a | NP_001095272.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 9 | NM_001352031.3:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform d | NP_001338960.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 10 | NM_001352032.3:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform d | NP_001338961.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 5 | NM_001352027.3:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform c | NP_001338956.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 8 | NM_001352030.3:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform 8 | NP_001338959.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 4 | NM_001352026.3:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform c | NP_001338955.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 3 | NM_001352025.3:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform c | NP_001338954.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant 11 | NR_147890.3:n.1415T>A | N/A | Non Coding Transcript Variant |
| PHF21A transcript variant 12 | NR_165446.1:n.1415T>A | N/A | Non Coding Transcript Variant |
| PHF21A transcript variant X1 | XM_011520157.3:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X1 | XP_011518459.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X2 | XM_017017887.3:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X1 | XP_016873376.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X3 | XM_011520158.3:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X1 | XP_011518460.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X4 | XM_047427079.1:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X1 | XP_047283035.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X5 | XM_047427080.1:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X1 | XP_047283036.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X6 | XM_017017889.2:c.789T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X2 | XP_016873378.1:p.Ala263= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X7 | XM_047427081.1:c.789T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X2 | XP_047283037.1:p.Ala263= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X8 | XM_047427082.1:c.789T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X3 | XP_047283038.1:p.Ala263= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X9 | XM_047427083.1:c.786T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X4 | XP_047283039.1:p.Ala262= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X10 | XM_011520174.3:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X5 | XP_011518476.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X11 | XM_005252965.5:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X5 | XP_005253022.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X12 | XM_047427084.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X5 | XP_047283040.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X13 | XM_017017892.2:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X6 | XP_016873381.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X14 | XM_017017891.2:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X7 | XP_016873380.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X15 | XM_047427085.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X6 | XP_047283041.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X16 | XM_047427086.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X7 | XP_047283042.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X17 | XM_047427087.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X6 | XP_047283043.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X18 | XM_047427088.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X6 | XP_047283044.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X19 | XM_047427089.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X7 | XP_047283045.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X20 | XM_011520175.3:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X6 | XP_011518477.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X21 | XM_047427090.1:c.765T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X8 | XP_047283046.1:p.Ala255= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X22 | XM_047427091.1:c.765T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X8 | XP_047283047.1:p.Ala255= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X23 | XM_047427092.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X9 | XP_047283048.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X24 | XM_047427093.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X9 | XP_047283049.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X25 | XM_047427094.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X9 | XP_047283050.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X26 | XM_047427095.1:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X10 | XP_047283051.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X27 | XM_047427097.1:c.789T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X11 | XP_047283053.1:p.Ala263= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X28 | XM_047427098.1:c.789T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X12 | XP_047283054.1:p.Ala263= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X29 | XM_047427099.1:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X13 | XP_047283055.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X30 | XM_011520179.4:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X14 | XP_011518481.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X31 | XM_047427100.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X14 | XP_047283056.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X32 | XM_047427101.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X14 | XP_047283057.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X33 | XM_047427102.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X15 | XP_047283058.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X34 | XM_047427103.1:c.765T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X16 | XP_047283059.1:p.Ala255= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X35 | XM_047427104.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X17 | XP_047283060.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X36 | XM_047427105.1:c.771T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X17 | XP_047283061.1:p.Ala257= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X37 | XM_047427107.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X18 | XP_047283063.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X38 | XM_047427108.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X19 | XP_047283064.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X39 | XM_047427109.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X18 | XP_047283065.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X40 | XM_047427110.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X18 | XP_047283066.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X41 | XM_047427111.1:c.792T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X20 | XP_047283067.1:p.Ala264= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X42 | XM_047427113.1:c.768T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X21 | XP_047283069.1:p.Ala256= | A (Ala) > A (Ala) | Synonymous Variant |
| PHF21A transcript variant X43 | XM_017017907.2:c.519T>A | A [GCT] > A [GCA] | Coding Sequence Variant |
| PHD finger protein 21A isoform X22 | XP_016873396.1:p.Ala173= | A (Ala) > A (Ala) | Synonymous Variant |
Help
Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.
Allele: T (allele ID:
712830
)
| ClinVar Accession | Disease Names | Clinical Significance |
|---|---|---|
| RCV000962944.5 | not provided | Benign |
Help
Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".
| Placement | A= | T |
|---|---|---|
| GRCh38.p14 chr 11 | NC_000011.10:g.45965540= | NC_000011.10:g.45965540A>T |
| GRCh37.p13 chr 11 | NC_000011.9:g.45987091= | NC_000011.9:g.45987091A>T |
| PHF21A transcript variant 2 | NM_016621.5:c.771= | NM_016621.5:c.771T>A |
| PHF21A transcript variant 2 | NM_016621.4:c.771= | NM_016621.4:c.771T>A |
| PHF21A transcript variant 2 | NM_016621.3:c.771= | NM_016621.3:c.771T>A |
| PHF21A transcript variant X11 | XM_005252965.5:c.771= | XM_005252965.5:c.771T>A |
| PHF21A transcript variant X21 | XM_005252965.4:c.771= | XM_005252965.4:c.771T>A |
| PHF21A transcript variant X20 | XM_005252965.3:c.771= | XM_005252965.3:c.771T>A |
| PHF21A transcript variant X4 | XM_005252965.2:c.771= | XM_005252965.2:c.771T>A |
| PHF21A transcript variant X4 | XM_005252965.1:c.771= | XM_005252965.1:c.771T>A |
| PHF21A transcript variant X30 | XM_011520179.4:c.771= | XM_011520179.4:c.771T>A |
| PHF21A transcript variant X34 | XM_011520179.3:c.771= | XM_011520179.3:c.771T>A |
| PHF21A transcript variant X33 | XM_011520179.2:c.771= | XM_011520179.2:c.771T>A |
| PHF21A transcript variant X26 | XM_011520179.1:c.771= | XM_011520179.1:c.771T>A |
| PHF21A transcript variant 3 | NM_001352025.3:c.771= | NM_001352025.3:c.771T>A |
| PHF21A transcript variant 3 | NM_001352025.2:c.771= | NM_001352025.2:c.771T>A |
| PHF21A transcript variant 3 | NM_001352025.1:c.771= | NM_001352025.1:c.771T>A |
| PHF21A transcript variant X3 | XM_011520158.3:c.792= | XM_011520158.3:c.792T>A |
| PHF21A transcript variant X1 | XM_011520158.2:c.792= | XM_011520158.2:c.792T>A |
| PHF21A transcript variant X2 | XM_011520158.1:c.792= | XM_011520158.1:c.792T>A |
| PHF21A transcript variant 5 | NM_001352027.3:c.771= | NM_001352027.3:c.771T>A |
| PHF21A transcript variant 5 | NM_001352027.2:c.771= | NM_001352027.2:c.771T>A |
| PHF21A transcript variant 5 | NM_001352027.1:c.771= | NM_001352027.1:c.771T>A |
| PHF21A transcript variant 10 | NM_001352032.3:c.768= | NM_001352032.3:c.768T>A |
| PHF21A transcript variant 10 | NM_001352032.2:c.768= | NM_001352032.2:c.768T>A |
| PHF21A transcript variant 10 | NM_001352032.1:c.768= | NM_001352032.1:c.768T>A |
| PHF21A transcript variant X1 | XM_011520157.3:c.792= | XM_011520157.3:c.792T>A |
| PHF21A transcript variant X8 | XM_011520157.2:c.792= | XM_011520157.2:c.792T>A |
| PHF21A transcript variant X1 | XM_011520157.1:c.792= | XM_011520157.1:c.792T>A |
| PHF21A transcript variant 4 | NM_001352026.3:c.771= | NM_001352026.3:c.771T>A |
| PHF21A transcript variant 4 | NM_001352026.2:c.771= | NM_001352026.2:c.771T>A |
| PHF21A transcript variant 4 | NM_001352026.1:c.771= | NM_001352026.1:c.771T>A |
| PHF21A transcript variant 1 | NM_001101802.3:c.768= | NM_001101802.3:c.768T>A |
| PHF21A transcript variant 1 | NM_001101802.2:c.768= | NM_001101802.2:c.768T>A |
| PHF21A transcript variant 1 | NM_001101802.1:c.768= | NM_001101802.1:c.768T>A |
| PHF21A transcript variant 11 | NR_147890.3:n.1415= | NR_147890.3:n.1415T>A |
| PHF21A transcript | NR_147890.2:n.946= | NR_147890.2:n.946T>A |
| PHF21A transcript | NR_147890.1:n.1395= | NR_147890.1:n.1395T>A |
| PHF21A transcript variant 9 | NM_001352031.3:c.768= | NM_001352031.3:c.768T>A |
| PHF21A transcript variant 9 | NM_001352031.2:c.768= | NM_001352031.2:c.768T>A |
| PHF21A transcript variant 9 | NM_001352031.1:c.768= | NM_001352031.1:c.768T>A |
| PHF21A transcript variant 8 | NM_001352030.3:c.768= | NM_001352030.3:c.768T>A |
| PHF21A transcript variant 8 | NM_001352030.2:c.768= | NM_001352030.2:c.768T>A |
| PHF21A transcript variant 8 | NM_001352030.1:c.768= | NM_001352030.1:c.768T>A |
| PHF21A transcript variant X10 | XM_011520174.3:c.771= | XM_011520174.3:c.771T>A |
| PHF21A transcript variant X17 | XM_011520174.2:c.771= | XM_011520174.2:c.771T>A |
| PHF21A transcript variant X19 | XM_011520174.1:c.771= | XM_011520174.1:c.771T>A |
| PHF21A transcript variant X20 | XM_011520175.3:c.768= | XM_011520175.3:c.768T>A |
| PHF21A transcript variant X24 | XM_011520175.2:c.768= | XM_011520175.2:c.768T>A |
| PHF21A transcript variant X21 | XM_011520175.1:c.768= | XM_011520175.1:c.768T>A |
| PHF21A transcript variant X2 | XM_017017887.3:c.792= | XM_017017887.3:c.792T>A |
| PHF21A transcript variant X13 | XM_017017887.2:c.792= | XM_017017887.2:c.792T>A |
| PHF21A transcript variant X14 | XM_017017887.1:c.792= | XM_017017887.1:c.792T>A |
| PHF21A transcript variant X6 | XM_017017889.2:c.789= | XM_017017889.2:c.789T>A |
| PHF21A transcript variant X15 | XM_017017889.1:c.789= | XM_017017889.1:c.789T>A |
| PHF21A transcript variant X13 | XM_017017892.2:c.768= | XM_017017892.2:c.768T>A |
| PHF21A transcript variant X23 | XM_017017892.1:c.768= | XM_017017892.1:c.768T>A |
| PHF21A transcript variant X14 | XM_017017891.2:c.768= | XM_017017891.2:c.768T>A |
| PHF21A transcript variant X22 | XM_017017891.1:c.768= | XM_017017891.1:c.768T>A |
| PHF21A transcript variant X43 | XM_017017907.2:c.519= | XM_017017907.2:c.519T>A |
| PHF21A transcript variant X41 | XM_017017907.1:c.519= | XM_017017907.1:c.519T>A |
| PHF21A transcript variant X5 | XM_047427080.1:c.792= | XM_047427080.1:c.792T>A |
| PHF21A transcript variant X16 | XM_047427086.1:c.768= | XM_047427086.1:c.768T>A |
| PHF21A transcript variant X4 | XM_047427079.1:c.792= | XM_047427079.1:c.792T>A |
| PHF21A transcript variant X12 | XM_047427084.1:c.771= | XM_047427084.1:c.771T>A |
| PHF21A transcript variant X18 | XM_047427088.1:c.768= | XM_047427088.1:c.768T>A |
| PHF21A transcript variant X23 | XM_047427092.1:c.771= | XM_047427092.1:c.771T>A |
| PHF21A transcript variant X21 | XM_047427090.1:c.765= | XM_047427090.1:c.765T>A |
| PHF21A transcript variant 12 | NR_165446.1:n.1415= | NR_165446.1:n.1415T>A |
| PHF21A transcript variant X25 | XM_047427094.1:c.771= | XM_047427094.1:c.771T>A |
| PHF21A transcript variant X8 | XM_047427082.1:c.789= | XM_047427082.1:c.789T>A |
| PHF21A transcript variant X7 | XM_047427081.1:c.789= | XM_047427081.1:c.789T>A |
| PHF21A transcript variant X15 | XM_047427085.1:c.768= | XM_047427085.1:c.768T>A |
| PHF21A transcript variant X22 | XM_047427091.1:c.765= | XM_047427091.1:c.765T>A |
| PHF21A transcript variant X35 | XM_047427104.1:c.771= | XM_047427104.1:c.771T>A |
| PHF21A transcript variant X37 | XM_047427107.1:c.768= | XM_047427107.1:c.768T>A |
| PHF21A transcript variant X28 | XM_047427098.1:c.789= | XM_047427098.1:c.789T>A |
| PHF21A transcript variant X36 | XM_047427105.1:c.771= | XM_047427105.1:c.771T>A |
| PHF21A transcript variant X39 | XM_047427109.1:c.768= | XM_047427109.1:c.768T>A |
| PHF21A transcript variant X38 | XM_047427108.1:c.768= | XM_047427108.1:c.768T>A |
| PHF21A transcript variant X24 | XM_047427093.1:c.771= | XM_047427093.1:c.771T>A |
| PHF21A transcript variant 7 | NM_001352029.1:c.771= | NM_001352029.1:c.771T>A |
| PHF21A transcript variant X9 | XM_047427083.1:c.786= | XM_047427083.1:c.786T>A |
| PHF21A transcript variant X19 | XM_047427089.1:c.768= | XM_047427089.1:c.768T>A |
| PHF21A transcript variant X17 | XM_047427087.1:c.768= | XM_047427087.1:c.768T>A |
| PHF21A transcript variant X31 | XM_047427100.1:c.771= | XM_047427100.1:c.771T>A |
| PHF21A transcript variant X26 | XM_047427095.1:c.792= | XM_047427095.1:c.792T>A |
| PHF21A transcript variant X27 | XM_047427097.1:c.789= | XM_047427097.1:c.789T>A |
| PHF21A transcript variant X29 | XM_047427099.1:c.792= | XM_047427099.1:c.792T>A |
| PHF21A transcript variant X34 | XM_047427103.1:c.765= | XM_047427103.1:c.765T>A |
| PHF21A transcript variant X32 | XM_047427101.1:c.771= | XM_047427101.1:c.771T>A |
| PHF21A transcript variant X33 | XM_047427102.1:c.768= | XM_047427102.1:c.768T>A |
| PHF21A transcript variant X40 | XM_047427110.1:c.768= | XM_047427110.1:c.768T>A |
| PHF21A transcript variant 6 | NM_001352028.1:c.771= | NM_001352028.1:c.771T>A |
| PHF21A transcript variant X42 | XM_047427113.1:c.768= | XM_047427113.1:c.768T>A |
| PHF21A transcript variant X41 | XM_047427111.1:c.792= | XM_047427111.1:c.792T>A |
| PHD finger protein 21A isoform b | NP_057705.3:p.Ala257= | NP_057705.3:p.Ala257= |
| PHD finger protein 21A isoform X5 | XP_005253022.1:p.Ala257= | XP_005253022.1:p.Ala257= |
| PHD finger protein 21A isoform X14 | XP_011518481.1:p.Ala257= | XP_011518481.1:p.Ala257= |
| PHD finger protein 21A isoform c | NP_001338954.1:p.Ala257= | NP_001338954.1:p.Ala257= |
| PHD finger protein 21A isoform X1 | XP_011518460.1:p.Ala264= | XP_011518460.1:p.Ala264= |
| PHD finger protein 21A isoform c | NP_001338956.1:p.Ala257= | NP_001338956.1:p.Ala257= |
| PHD finger protein 21A isoform d | NP_001338961.1:p.Ala256= | NP_001338961.1:p.Ala256= |
| PHD finger protein 21A isoform X1 | XP_011518459.1:p.Ala264= | XP_011518459.1:p.Ala264= |
| PHD finger protein 21A isoform c | NP_001338955.1:p.Ala257= | NP_001338955.1:p.Ala257= |
| PHD finger protein 21A isoform a | NP_001095272.1:p.Ala256= | NP_001095272.1:p.Ala256= |
| PHD finger protein 21A isoform d | NP_001338960.1:p.Ala256= | NP_001338960.1:p.Ala256= |
| PHD finger protein 21A isoform 8 | NP_001338959.1:p.Ala256= | NP_001338959.1:p.Ala256= |
| PHD finger protein 21A isoform X5 | XP_011518476.1:p.Ala257= | XP_011518476.1:p.Ala257= |
| PHD finger protein 21A isoform X6 | XP_011518477.1:p.Ala256= | XP_011518477.1:p.Ala256= |
| PHD finger protein 21A isoform X1 | XP_016873376.1:p.Ala264= | XP_016873376.1:p.Ala264= |
| PHD finger protein 21A isoform X2 | XP_016873378.1:p.Ala263= | XP_016873378.1:p.Ala263= |
| PHD finger protein 21A isoform X6 | XP_016873381.1:p.Ala256= | XP_016873381.1:p.Ala256= |
| PHD finger protein 21A isoform X7 | XP_016873380.1:p.Ala256= | XP_016873380.1:p.Ala256= |
| PHD finger protein 21A isoform X22 | XP_016873396.1:p.Ala173= | XP_016873396.1:p.Ala173= |
| PHD finger protein 21A isoform X1 | XP_047283036.1:p.Ala264= | XP_047283036.1:p.Ala264= |
| PHD finger protein 21A isoform X7 | XP_047283042.1:p.Ala256= | XP_047283042.1:p.Ala256= |
| PHD finger protein 21A isoform X1 | XP_047283035.1:p.Ala264= | XP_047283035.1:p.Ala264= |
| PHD finger protein 21A isoform X5 | XP_047283040.1:p.Ala257= | XP_047283040.1:p.Ala257= |
| PHD finger protein 21A isoform X6 | XP_047283044.1:p.Ala256= | XP_047283044.1:p.Ala256= |
| PHD finger protein 21A isoform X9 | XP_047283048.1:p.Ala257= | XP_047283048.1:p.Ala257= |
| PHD finger protein 21A isoform X8 | XP_047283046.1:p.Ala255= | XP_047283046.1:p.Ala255= |
| PHD finger protein 21A isoform X9 | XP_047283050.1:p.Ala257= | XP_047283050.1:p.Ala257= |
| PHD finger protein 21A isoform X3 | XP_047283038.1:p.Ala263= | XP_047283038.1:p.Ala263= |
| PHD finger protein 21A isoform X2 | XP_047283037.1:p.Ala263= | XP_047283037.1:p.Ala263= |
| PHD finger protein 21A isoform X6 | XP_047283041.1:p.Ala256= | XP_047283041.1:p.Ala256= |
| PHD finger protein 21A isoform X8 | XP_047283047.1:p.Ala255= | XP_047283047.1:p.Ala255= |
| PHD finger protein 21A isoform X17 | XP_047283060.1:p.Ala257= | XP_047283060.1:p.Ala257= |
| PHD finger protein 21A isoform X18 | XP_047283063.1:p.Ala256= | XP_047283063.1:p.Ala256= |
| PHD finger protein 21A isoform X12 | XP_047283054.1:p.Ala263= | XP_047283054.1:p.Ala263= |
| PHD finger protein 21A isoform X17 | XP_047283061.1:p.Ala257= | XP_047283061.1:p.Ala257= |
| PHD finger protein 21A isoform X18 | XP_047283065.1:p.Ala256= | XP_047283065.1:p.Ala256= |
| PHD finger protein 21A isoform X19 | XP_047283064.1:p.Ala256= | XP_047283064.1:p.Ala256= |
| PHD finger protein 21A isoform X9 | XP_047283049.1:p.Ala257= | XP_047283049.1:p.Ala257= |
| PHD finger protein 21A isoform b | NP_001338958.1:p.Ala257= | NP_001338958.1:p.Ala257= |
| PHD finger protein 21A isoform X4 | XP_047283039.1:p.Ala262= | XP_047283039.1:p.Ala262= |
| PHD finger protein 21A isoform X7 | XP_047283045.1:p.Ala256= | XP_047283045.1:p.Ala256= |
| PHD finger protein 21A isoform X6 | XP_047283043.1:p.Ala256= | XP_047283043.1:p.Ala256= |
| PHD finger protein 21A isoform X14 | XP_047283056.1:p.Ala257= | XP_047283056.1:p.Ala257= |
| PHD finger protein 21A isoform X10 | XP_047283051.1:p.Ala264= | XP_047283051.1:p.Ala264= |
| PHD finger protein 21A isoform X11 | XP_047283053.1:p.Ala263= | XP_047283053.1:p.Ala263= |
| PHD finger protein 21A isoform X13 | XP_047283055.1:p.Ala264= | XP_047283055.1:p.Ala264= |
| PHD finger protein 21A isoform X16 | XP_047283059.1:p.Ala255= | XP_047283059.1:p.Ala255= |
| PHD finger protein 21A isoform X14 | XP_047283057.1:p.Ala257= | XP_047283057.1:p.Ala257= |
| PHD finger protein 21A isoform X15 | XP_047283058.1:p.Ala256= | XP_047283058.1:p.Ala256= |
| PHD finger protein 21A isoform X18 | XP_047283066.1:p.Ala256= | XP_047283066.1:p.Ala256= |
| PHD finger protein 21A isoform b | NP_001338957.1:p.Ala257= | NP_001338957.1:p.Ala257= |
| PHD finger protein 21A isoform X21 | XP_047283069.1:p.Ala256= | XP_047283069.1:p.Ala256= |
| PHD finger protein 21A isoform X20 | XP_047283067.1:p.Ala264= | XP_047283067.1:p.Ala264= |
Help
Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.
41 SubSNP,
19 Frequency,
1 ClinVar
submissions
| No | Submitter | Submission ID | Date (Build) |
|---|---|---|---|
| 1 | 1000GENOMES | ss336698259 | May 09, 2011 (134) |
| 2 | NHLBI-ESP | ss342323134 | May 09, 2011 (134) |
| 3 | 1000GENOMES | ss491016378 | May 04, 2012 (137) |
| 4 | CLINSEQ_SNP | ss491642873 | May 04, 2012 (137) |
| 5 | EVA-GONL | ss988487725 | Aug 21, 2014 (142) |
| 6 | 1000GENOMES | ss1341133111 | Aug 21, 2014 (142) |
| 7 | DDI | ss1426622845 | Apr 01, 2015 (144) |
| 8 | EVA_GENOME_DK | ss1575691379 | Apr 01, 2015 (144) |
| 9 | EVA_FINRISK | ss1584074238 | Apr 01, 2015 (144) |
| 10 | EVA_DECODE | ss1598163331 | Apr 01, 2015 (144) |
| 11 | EVA_UK10K_ALSPAC | ss1626531236 | Apr 01, 2015 (144) |
| 12 | EVA_UK10K_TWINSUK | ss1669525269 | Apr 01, 2015 (144) |
| 13 | EVA_EXAC | ss1690335082 | Apr 01, 2015 (144) |
| 14 | EVA_MGP | ss1711289232 | Apr 01, 2015 (144) |
| 15 | WEILL_CORNELL_DGM | ss1931845167 | Feb 12, 2016 (147) |
| 16 | HUMAN_LONGEVITY | ss2182284485 | Dec 20, 2016 (150) |
| 17 | GNOMAD | ss2738919555 | Nov 08, 2017 (151) |
| 18 | GNOMAD | ss2748597795 | Nov 08, 2017 (151) |
| 19 | GNOMAD | ss2899179335 | Nov 08, 2017 (151) |
| 20 | SWEGEN | ss3008012704 | Nov 08, 2017 (151) |
| 21 | EGCUT_WGS | ss3675421898 | Jul 13, 2019 (153) |
| 22 | EVA_DECODE | ss3691716907 | Jul 13, 2019 (153) |
| 23 | ACPOP | ss3738151283 | Jul 13, 2019 (153) |
| 24 | KHV_HUMAN_GENOMES | ss3814605637 | Jul 13, 2019 (153) |
| 25 | EVA | ss3824609724 | Apr 26, 2020 (154) |
| 26 | EVA | ss3825796855 | Apr 26, 2020 (154) |
| 27 | EVA | ss3832613771 | Apr 26, 2020 (154) |
| 28 | SGDP_PRJ | ss3876179396 | Apr 26, 2020 (154) |
| 29 | FSA-LAB | ss3984000700 | Apr 27, 2021 (155) |
| 30 | EVA | ss3986522294 | Apr 27, 2021 (155) |
| 31 | TOPMED | ss4884042029 | Apr 27, 2021 (155) |
| 32 | 1000G_HIGH_COVERAGE | ss5287284184 | Oct 16, 2022 (156) |
| 33 | EVA | ss5399358640 | Oct 16, 2022 (156) |
| 34 | HUGCELL_USP | ss5482500238 | Oct 16, 2022 (156) |
| 35 | 1000G_HIGH_COVERAGE | ss5582879834 | Oct 16, 2022 (156) |
| 36 | EVA | ss5623953077 | Oct 16, 2022 (156) |
| 37 | SANFORD_IMAGENETICS | ss5651151973 | Oct 16, 2022 (156) |
| 38 | EVA | ss5836612124 | Oct 16, 2022 (156) |
| 39 | EVA | ss5848322866 | Oct 16, 2022 (156) |
| 40 | EVA | ss5919848316 | Oct 16, 2022 (156) |
| 41 | EVA | ss5942470746 | Oct 16, 2022 (156) |
| 42 | 1000Genomes | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 43 | 1000Genomes_30x | NC_000011.10 - 45965540 | Oct 16, 2022 (156) |
| 44 | The Avon Longitudinal Study of Parents and Children | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 45 | Genetic variation in the Estonian population | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 46 | ExAC | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 47 | FINRISK | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 48 | The Danish reference pan genome | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 49 | gnomAD - Genomes | NC_000011.10 - 45965540 | Apr 27, 2021 (155) |
| 50 | gnomAD - Exomes | NC_000011.9 - 45987091 | Jul 13, 2019 (153) |
| 51 | GO Exome Sequencing Project | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 52 | Genome of the Netherlands Release 5 | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 53 | Medical Genome Project healthy controls from Spanish population | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 54 | Northern Sweden | NC_000011.9 - 45987091 | Jul 13, 2019 (153) |
| 55 | Qatari | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 56 | SGDP_PRJ | NC_000011.9 - 45987091 | Apr 26, 2020 (154) |
| 57 | TopMed | NC_000011.10 - 45965540 | Apr 27, 2021 (155) |
| 58 | UK 10K study - Twins | NC_000011.9 - 45987091 | Oct 12, 2018 (152) |
| 59 | A Vietnamese Genetic Variation Database | NC_000011.9 - 45987091 | Jul 13, 2019 (153) |
| 60 | ALFA | NC_000011.10 - 45965540 | Apr 27, 2021 (155) |
| 61 | ClinVar | RCV000962944.5 | Oct 16, 2022 (156) |
Help
History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).
Added to this RefSNP Cluster:
| Submission IDs | Observation SPDI | Canonical SPDI | Source RSIDs |
|---|---|---|---|
| ss491642873, ss1598163331 | NC_000011.8:45943666:A:T | NC_000011.10:45965539:A:T | (self) |
| 53652982, 29810676, 21160146, 588822, 70699, 2553958, 8132283, 1067321, 13300105, 404992, 11436148, 13887097, 28196376, 29810676, 6623856, ss336698259, ss342323134, ss491016378, ss988487725, ss1341133111, ss1426622845, ss1575691379, ss1584074238, ss1626531236, ss1669525269, ss1690335082, ss1711289232, ss1931845167, ss2738919555, ss2748597795, ss2899179335, ss3008012704, ss3675421898, ss3738151283, ss3824609724, ss3825796855, ss3832613771, ss3876179396, ss3984000700, ss3986522294, ss5399358640, ss5623953077, ss5651151973, ss5836612124, ss5848322866, ss5942470746 | NC_000011.9:45987090:A:T | NC_000011.10:45965539:A:T | (self) |
| RCV000962944.5, 70405769, 378645387, 99587685, 4168508255, ss2182284485, ss3691716907, ss3814605637, ss4884042029, ss5287284184, ss5482500238, ss5582879834, ss5919848316 | NC_000011.10:45965539:A:T | NC_000011.10:45965539:A:T | (self) |
Help
Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.
No publications for rs151169176
Help
The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.
Genome context:
Select flank length:
Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.