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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10887741

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr10:87683553 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
T>A / T>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.321013 (84969/264690, TOPMED)
C=0.377303 (61603/163272, ALFA)
C=0.322407 (45155/140056, GnomAD) (+ 20 more)
C=0.27588 (21711/78698, PAGE_STUDY)
C=0.33615 (9499/28258, 14KJPN)
C=0.33980 (5695/16760, 8.3KJPN)
C=0.3181 (2037/6404, 1000G_30x)
C=0.3203 (1604/5008, 1000G)
C=0.4167 (1867/4480, Estonian)
C=0.3840 (1480/3854, ALSPAC)
C=0.3789 (1405/3708, TWINSUK)
C=0.4120 (1204/2922, KOREAN)
C=0.2953 (557/1886, HapMap)
C=0.370 (369/998, GoNL)
C=0.462 (363/786, PRJEB37584)
C=0.455 (285/626, Chileans)
C=0.427 (256/600, NorthernSweden)
T=0.380 (111/292, SGDP_PRJ)
C=0.394 (85/216, Qatari)
C=0.481 (101/210, Vietnamese)
T=0.38 (16/42, Siberian)
C=0.45 (18/40, GENOME_DK)
C=0.40 (16/40, Ancient Sardinia)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
PAPSS2 : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541
Population Group Sample Size Ref Allele Alt Allele
Total Global 163488 T=0.622822 C=0.377178
European Sub 134922 T=0.613258 C=0.386742
African Sub 7604 T=0.8273 C=0.1727
African Others Sub 262 T=0.859 C=0.141
African American Sub 7342 T=0.8262 C=0.1738
Asian Sub 6296 T=0.5764 C=0.4236
East Asian Sub 4454 T=0.5770 C=0.4230
Other Asian Sub 1842 T=0.5749 C=0.4251
Latin American 1 Sub 578 T=0.661 C=0.339
Latin American 2 Sub 3106 T=0.6291 C=0.3709
South Asian Sub 292 T=0.647 C=0.353
Other Sub 10690 T=0.62086 C=0.37914


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 T=0.678987 C=0.321013
Allele Frequency Aggregator Total Global 163272 T=0.622697 C=0.377303
Allele Frequency Aggregator European Sub 134742 T=0.613150 C=0.386850
Allele Frequency Aggregator Other Sub 10668 T=0.62045 C=0.37955
Allele Frequency Aggregator African Sub 7590 T=0.8273 C=0.1727
Allele Frequency Aggregator Asian Sub 6296 T=0.5764 C=0.4236
Allele Frequency Aggregator Latin American 2 Sub 3106 T=0.6291 C=0.3709
Allele Frequency Aggregator Latin American 1 Sub 578 T=0.661 C=0.339
Allele Frequency Aggregator South Asian Sub 292 T=0.647 C=0.353
gnomAD - Genomes Global Study-wide 140056 T=0.677593 C=0.322407
gnomAD - Genomes European Sub 75838 T=0.60844 C=0.39156
gnomAD - Genomes African Sub 41998 T=0.82221 C=0.17779
gnomAD - Genomes American Sub 13628 T=0.64661 C=0.35339
gnomAD - Genomes Ashkenazi Jewish Sub 3324 T=0.6895 C=0.3105
gnomAD - Genomes East Asian Sub 3120 T=0.5333 C=0.4667
gnomAD - Genomes Other Sub 2148 T=0.6792 C=0.3208
The PAGE Study Global Study-wide 78698 T=0.72412 C=0.27588
The PAGE Study AfricanAmerican Sub 32516 T=0.81434 C=0.18566
The PAGE Study Mexican Sub 10810 T=0.62470 C=0.37530
The PAGE Study Asian Sub 8314 T=0.6363 C=0.3637
The PAGE Study PuertoRican Sub 7918 T=0.6809 C=0.3191
The PAGE Study NativeHawaiian Sub 4534 T=0.7265 C=0.2735
The PAGE Study Cuban Sub 4230 T=0.6506 C=0.3494
The PAGE Study Dominican Sub 3828 T=0.7328 C=0.2672
The PAGE Study CentralAmerican Sub 2450 T=0.6437 C=0.3563
The PAGE Study SouthAmerican Sub 1982 T=0.6160 C=0.3840
The PAGE Study NativeAmerican Sub 1260 T=0.6579 C=0.3421
The PAGE Study SouthAsian Sub 856 T=0.696 C=0.304
14KJPN JAPANESE Study-wide 28258 T=0.66385 C=0.33615
8.3KJPN JAPANESE Study-wide 16760 T=0.66020 C=0.33980
1000Genomes_30x Global Study-wide 6404 T=0.6819 C=0.3181
1000Genomes_30x African Sub 1786 T=0.8595 C=0.1405
1000Genomes_30x Europe Sub 1266 T=0.6074 C=0.3926
1000Genomes_30x South Asian Sub 1202 T=0.6855 C=0.3145
1000Genomes_30x East Asian Sub 1170 T=0.5504 C=0.4496
1000Genomes_30x American Sub 980 T=0.607 C=0.393
1000Genomes Global Study-wide 5008 T=0.6797 C=0.3203
1000Genomes African Sub 1322 T=0.8570 C=0.1430
1000Genomes East Asian Sub 1008 T=0.5536 C=0.4464
1000Genomes Europe Sub 1006 T=0.6153 C=0.3847
1000Genomes South Asian Sub 978 T=0.691 C=0.309
1000Genomes American Sub 694 T=0.602 C=0.398
Genetic variation in the Estonian population Estonian Study-wide 4480 T=0.5833 C=0.4167
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 T=0.6160 C=0.3840
UK 10K study - Twins TWIN COHORT Study-wide 3708 T=0.6211 C=0.3789
KOREAN population from KRGDB KOREAN Study-wide 2922 T=0.5880 A=0.0000, C=0.4120
HapMap Global Study-wide 1886 T=0.7047 C=0.2953
HapMap American Sub 766 T=0.624 C=0.376
HapMap African Sub 692 T=0.847 C=0.153
HapMap Asian Sub 252 T=0.591 C=0.409
HapMap Europe Sub 176 T=0.659 C=0.341
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 T=0.630 C=0.370
CNV burdens in cranial meningiomas Global Study-wide 786 T=0.538 C=0.462
CNV burdens in cranial meningiomas CRM Sub 786 T=0.538 C=0.462
Chileans Chilean Study-wide 626 T=0.545 C=0.455
Northern Sweden ACPOP Study-wide 600 T=0.573 C=0.427
SGDP_PRJ Global Study-wide 292 T=0.380 C=0.620
Qatari Global Study-wide 216 T=0.606 C=0.394
A Vietnamese Genetic Variation Database Global Study-wide 210 T=0.519 C=0.481
Siberian Global Study-wide 42 T=0.38 C=0.62
The Danish reference pan genome Danish Study-wide 40 T=0.55 C=0.45
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 40 T=0.60 C=0.40
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 10 NC_000010.11:g.87683553T>A
GRCh38.p14 chr 10 NC_000010.11:g.87683553T>C
GRCh37.p13 chr 10 NC_000010.10:g.89443310T>A
GRCh37.p13 chr 10 NC_000010.10:g.89443310T>C
PAPSS2 RefSeqGene NG_012150.1:g.28835T>A
PAPSS2 RefSeqGene NG_012150.1:g.28835T>C
Gene: PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
PAPSS2 transcript variant 2 NM_001015880.2:c.27+23545…

NM_001015880.2:c.27+23545T>A

N/A Intron Variant
PAPSS2 transcript variant 1 NM_004670.4:c.27+23545T>A N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement T= A C
GRCh38.p14 chr 10 NC_000010.11:g.87683553= NC_000010.11:g.87683553T>A NC_000010.11:g.87683553T>C
GRCh37.p13 chr 10 NC_000010.10:g.89443310= NC_000010.10:g.89443310T>A NC_000010.10:g.89443310T>C
PAPSS2 RefSeqGene NG_012150.1:g.28835= NG_012150.1:g.28835T>A NG_012150.1:g.28835T>C
PAPSS2 transcript variant 2 NM_001015880.1:c.27+23545= NM_001015880.1:c.27+23545T>A NM_001015880.1:c.27+23545T>C
PAPSS2 transcript variant 2 NM_001015880.2:c.27+23545= NM_001015880.2:c.27+23545T>A NM_001015880.2:c.27+23545T>C
PAPSS2 transcript variant 1 NM_004670.3:c.27+23545= NM_004670.3:c.27+23545T>A NM_004670.3:c.27+23545T>C
PAPSS2 transcript variant 1 NM_004670.4:c.27+23545= NM_004670.4:c.27+23545T>A NM_004670.4:c.27+23545T>C
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

101 SubSNP, 23 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_SNP ss16071744 Feb 27, 2004 (120)
2 SC_SNP ss18428024 Feb 27, 2004 (120)
3 CSHL-HAPMAP ss19171196 Feb 27, 2004 (120)
4 SSAHASNP ss20719087 Apr 05, 2004 (121)
5 ABI ss38566980 Mar 15, 2006 (126)
6 AFFY ss76674035 Dec 07, 2007 (129)
7 HGSV ss82381509 Dec 14, 2007 (130)
8 BCMHGSC_JDW ss88301432 Mar 23, 2008 (129)
9 HUMANGENOME_JCVI ss97573426 Feb 04, 2009 (130)
10 BGI ss102899631 Dec 01, 2009 (131)
11 KRIBB_YJKIM ss105016842 Feb 04, 2009 (130)
12 1000GENOMES ss109633190 Jan 24, 2009 (130)
13 ENSEMBL ss131995909 Dec 01, 2009 (131)
14 ENSEMBL ss137902457 Dec 01, 2009 (131)
15 COMPLETE_GENOMICS ss168658400 Jul 04, 2010 (132)
16 COMPLETE_GENOMICS ss174678047 Jul 04, 2010 (132)
17 BUSHMAN ss201826958 Jul 04, 2010 (132)
18 BCM-HGSC-SUB ss207216725 Jul 04, 2010 (132)
19 1000GENOMES ss224859721 Jul 14, 2010 (132)
20 1000GENOMES ss235273955 Jul 15, 2010 (132)
21 1000GENOMES ss241961319 Jul 15, 2010 (132)
22 BL ss254495990 May 09, 2011 (134)
23 GMI ss280714295 May 04, 2012 (137)
24 GMI ss286235449 Apr 25, 2013 (138)
25 PJP ss290890012 May 09, 2011 (134)
26 ILLUMINA ss410889851 Sep 17, 2011 (135)
27 EXOME_CHIP ss491437829 May 04, 2012 (137)
28 TISHKOFF ss562114425 Apr 25, 2013 (138)
29 SSMP ss657121049 Apr 25, 2013 (138)
30 ILLUMINA ss780680777 Aug 21, 2014 (142)
31 ILLUMINA ss783354067 Aug 21, 2014 (142)
32 EVA-GONL ss987752574 Aug 21, 2014 (142)
33 JMKIDD_LAB ss1077179178 Aug 21, 2014 (142)
34 1000GENOMES ss1338432604 Aug 21, 2014 (142)
35 DDI ss1426397087 Apr 01, 2015 (144)
36 EVA_GENOME_DK ss1575268488 Apr 01, 2015 (144)
37 EVA_DECODE ss1597425525 Apr 01, 2015 (144)
38 EVA_UK10K_ALSPAC ss1625090708 Apr 01, 2015 (144)
39 EVA_UK10K_TWINSUK ss1668084741 Apr 01, 2015 (144)
40 EVA_SVP ss1713198803 Apr 01, 2015 (144)
41 HAMMER_LAB ss1806500118 Sep 08, 2015 (146)
42 ILLUMINA ss1917849106 Feb 12, 2016 (147)
43 WEILL_CORNELL_DGM ss1931121054 Feb 12, 2016 (147)
44 ILLUMINA ss1959280915 Feb 12, 2016 (147)
45 GENOMED ss1967188833 Jul 19, 2016 (147)
46 JJLAB ss2026288292 Sep 14, 2016 (149)
47 USC_VALOUEV ss2154563769 Dec 20, 2016 (150)
48 HUMAN_LONGEVITY ss2176753143 Dec 20, 2016 (150)
49 SYSTEMSBIOZJU ss2627613375 Nov 08, 2017 (151)
50 ILLUMINA ss2632742102 Nov 08, 2017 (151)
51 ILLUMINA ss2632742103 Nov 08, 2017 (151)
52 GRF ss2698814998 Nov 08, 2017 (151)
53 GNOMAD ss2891587626 Nov 08, 2017 (151)
54 AFFY ss2984918570 Nov 08, 2017 (151)
55 SWEGEN ss3006886920 Nov 08, 2017 (151)
56 ILLUMINA ss3021260609 Nov 08, 2017 (151)
57 BIOINF_KMB_FNS_UNIBA ss3026933812 Nov 08, 2017 (151)
58 CSHL ss3349239886 Nov 08, 2017 (151)
59 ILLUMINA ss3626499062 Oct 12, 2018 (152)
60 ILLUMINA ss3634415113 Oct 12, 2018 (152)
61 ILLUMINA ss3640122454 Oct 12, 2018 (152)
62 ILLUMINA ss3644541023 Oct 12, 2018 (152)
63 URBANLAB ss3649431177 Oct 12, 2018 (152)
64 ILLUMINA ss3651618308 Oct 12, 2018 (152)
65 ILLUMINA ss3653689163 Oct 12, 2018 (152)
66 EGCUT_WGS ss3674296633 Jul 13, 2019 (153)
67 EVA_DECODE ss3690366469 Jul 13, 2019 (153)
68 ILLUMINA ss3725175587 Jul 13, 2019 (153)
69 ACPOP ss3737542584 Jul 13, 2019 (153)
70 ILLUMINA ss3744369154 Jul 13, 2019 (153)
71 ILLUMINA ss3744716086 Jul 13, 2019 (153)
72 EVA ss3748410101 Jul 13, 2019 (153)
73 PAGE_CC ss3771572532 Jul 13, 2019 (153)
74 KHV_HUMAN_GENOMES ss3813777786 Jul 13, 2019 (153)
75 EVA ss3832252064 Apr 26, 2020 (154)
76 EVA ss3839666639 Apr 26, 2020 (154)
77 EVA ss3845140052 Apr 26, 2020 (154)
78 SGDP_PRJ ss3874730202 Apr 26, 2020 (154)
79 KRGDB ss3922845417 Apr 26, 2020 (154)
80 EVA ss3984638192 Apr 26, 2021 (155)
81 EVA ss3985490256 Apr 26, 2021 (155)
82 TOPMED ss4860955238 Apr 26, 2021 (155)
83 TOMMO_GENOMICS ss5198754496 Apr 26, 2021 (155)
84 EVA ss5237481045 Apr 26, 2021 (155)
85 1000G_HIGH_COVERAGE ss5284922929 Oct 16, 2022 (156)
86 EVA ss5315490958 Oct 16, 2022 (156)
87 EVA ss5395025462 Oct 16, 2022 (156)
88 HUGCELL_USP ss5480399300 Oct 16, 2022 (156)
89 EVA ss5510112795 Oct 16, 2022 (156)
90 1000G_HIGH_COVERAGE ss5579315509 Oct 16, 2022 (156)
91 SANFORD_IMAGENETICS ss5624254374 Oct 16, 2022 (156)
92 SANFORD_IMAGENETICS ss5649792526 Oct 16, 2022 (156)
93 TOMMO_GENOMICS ss5744908635 Oct 16, 2022 (156)
94 YY_MCH ss5811751640 Oct 16, 2022 (156)
95 EVA ss5824741826 Oct 16, 2022 (156)
96 EVA ss5847377249 Oct 16, 2022 (156)
97 EVA ss5847603687 Oct 16, 2022 (156)
98 EVA ss5849675333 Oct 16, 2022 (156)
99 EVA ss5879892869 Oct 16, 2022 (156)
100 EVA ss5941073087 Oct 16, 2022 (156)
101 EVA ss5979333634 Oct 16, 2022 (156)
102 1000Genomes NC_000010.10 - 89443310 Oct 12, 2018 (152)
103 1000Genomes_30x NC_000010.11 - 87683553 Oct 16, 2022 (156)
104 The Avon Longitudinal Study of Parents and Children NC_000010.10 - 89443310 Oct 12, 2018 (152)
105 Chileans NC_000010.10 - 89443310 Apr 26, 2020 (154)
106 Genetic variation in the Estonian population NC_000010.10 - 89443310 Oct 12, 2018 (152)
107 The Danish reference pan genome NC_000010.10 - 89443310 Apr 26, 2020 (154)
108 gnomAD - Genomes NC_000010.11 - 87683553 Apr 26, 2021 (155)
109 Genome of the Netherlands Release 5 NC_000010.10 - 89443310 Apr 26, 2020 (154)
110 HapMap NC_000010.11 - 87683553 Apr 26, 2020 (154)
111 KOREAN population from KRGDB NC_000010.10 - 89443310 Apr 26, 2020 (154)
112 Northern Sweden NC_000010.10 - 89443310 Jul 13, 2019 (153)
113 The PAGE Study NC_000010.11 - 87683553 Jul 13, 2019 (153)
114 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000010.10 - 89443310 Apr 26, 2021 (155)
115 CNV burdens in cranial meningiomas NC_000010.10 - 89443310 Apr 26, 2021 (155)
116 Qatari NC_000010.10 - 89443310 Apr 26, 2020 (154)
117 SGDP_PRJ NC_000010.10 - 89443310 Apr 26, 2020 (154)
118 Siberian NC_000010.10 - 89443310 Apr 26, 2020 (154)
119 8.3KJPN NC_000010.10 - 89443310 Apr 26, 2021 (155)
120 14KJPN NC_000010.11 - 87683553 Oct 16, 2022 (156)
121 TopMed NC_000010.11 - 87683553 Apr 26, 2021 (155)
122 UK 10K study - Twins NC_000010.10 - 89443310 Oct 12, 2018 (152)
123 A Vietnamese Genetic Variation Database NC_000010.10 - 89443310 Jul 13, 2019 (153)
124 ALFA NC_000010.11 - 87683553 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs57685482 May 24, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
30022811, ss3922845417 NC_000010.10:89443309:T:A NC_000010.11:87683552:T:A (self)
ss82381509 NC_000010.8:89433289:T:C NC_000010.11:87683552:T:C (self)
ss88301432, ss109633190, ss168658400, ss174678047, ss201826958, ss207216725, ss254495990, ss280714295, ss286235449, ss290890012, ss410889851, ss1597425525, ss1713198803 NC_000010.9:89433289:T:C NC_000010.11:87683552:T:C (self)
50856684, 28229384, 57085, 20034881, 2263379, 12588615, 30022811, 10827449, 716183, 187656, 13162984, 26747182, 7080123, 56723803, 28229384, 6269250, ss224859721, ss235273955, ss241961319, ss491437829, ss562114425, ss657121049, ss780680777, ss783354067, ss987752574, ss1077179178, ss1338432604, ss1426397087, ss1575268488, ss1625090708, ss1668084741, ss1806500118, ss1917849106, ss1931121054, ss1959280915, ss1967188833, ss2026288292, ss2154563769, ss2627613375, ss2632742102, ss2632742103, ss2698814998, ss2891587626, ss2984918570, ss3006886920, ss3021260609, ss3349239886, ss3626499062, ss3634415113, ss3640122454, ss3644541023, ss3651618308, ss3653689163, ss3674296633, ss3737542584, ss3744369154, ss3744716086, ss3748410101, ss3832252064, ss3839666639, ss3874730202, ss3922845417, ss3984638192, ss3985490256, ss5198754496, ss5237481045, ss5315490958, ss5395025462, ss5510112795, ss5624254374, ss5649792526, ss5824741826, ss5847377249, ss5847603687, ss5941073087, ss5979333634 NC_000010.10:89443309:T:C NC_000010.11:87683552:T:C (self)
66841444, 359346567, 457545, 794001, 78745739, 76500893, 812555043, ss2176753143, ss3026933812, ss3649431177, ss3690366469, ss3725175587, ss3771572532, ss3813777786, ss3845140052, ss4860955238, ss5284922929, ss5480399300, ss5579315509, ss5744908635, ss5811751640, ss5849675333, ss5879892869 NC_000010.11:87683552:T:C NC_000010.11:87683552:T:C (self)
ss16071744, ss18428024, ss19171196, ss20719087 NT_030059.11:8191825:T:C NC_000010.11:87683552:T:C (self)
ss38566980, ss76674035, ss97573426, ss102899631, ss105016842, ss131995909, ss137902457 NT_030059.13:40247773:T:C NC_000010.11:87683552:T:C (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs10887741
PMID Title Author Year Journal
23733655 Genomics and genetics in the biology of adaptation to exercise. Bouchard C et al. 2011 Comprehensive Physiology
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post761+d5e8e07