Name: rs10518725
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10518725

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:53523555 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.197521 (61113/309400, ALFA)
A=0.144354 (38209/264690, TOPMED)
A=0.196805 (40360/205076, GENOGRAPHIC) (+ 24 more)
A=0.153125 (21421/139892, GnomAD)
A=0.11491 (9043/78696, PAGE_STUDY)
A=0.19946 (5636/28256, 14KJPN)
A=0.19749 (3310/16760, 8.3KJPN)
A=0.1446 (926/6404, 1000G_30x)
A=0.1504 (753/5008, 1000G)
A=0.1978 (886/4480, Estonian)
A=0.1871 (721/3854, ALSPAC)
A=0.1977 (733/3708, TWINSUK)
A=0.1618 (474/2930, KOREAN)
A=0.1583 (330/2084, HGDP_Stanford)
A=0.1049 (198/1888, HapMap)
A=0.1567 (287/1832, Korea1K)
A=0.177 (177/998, GoNL)
A=0.134 (106/792, PRJEB37584)
A=0.136 (85/626, Chileans)
A=0.227 (136/600, NorthernSweden)
A=0.194 (42/216, Qatari)
A=0.154 (33/214, Vietnamese)
G=0.434 (66/152, SGDP_PRJ)
A=0.20 (8/40, GENOME_DK)
A=0.22 (4/18, Ancient Sardinia)
G=0.50 (7/14, Siberian)
A=0.50 (7/14, Siberian)

Clinical Significance: Reported in ClinVar
Gene : Consequence: WDR72 : Intron Variant
LOC105370826 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20230706150541

Population	Group	Sample Size	Ref Allele	Alt Allele
Total	Global	314434	G=0.803148	A=0.196852
European	Sub	275324	G=0.794617	A=0.205383
African	Sub	12828	G=0.94652	A=0.05348
African Others	Sub	468	G=0.979	A=0.021
African American	Sub	12360	G=0.94531	A=0.05469
Asian	Sub	3988	G=0.8596	A=0.1404
East Asian	Sub	3210	G=0.8467	A=0.1533
Other Asian	Sub	778	G=0.913	A=0.087
Latin American 1	Sub	1216	G=0.8355	A=0.1645
Latin American 2	Sub	5314	G=0.8504	A=0.1496
South Asian	Sub	5232	G=0.7563	A=0.2437
Other	Sub	10532	G=0.82586	A=0.17414

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	309400	G=0.802479	A=0.197521
Allele Frequency Aggregator	European	Sub	272232	G=0.794477	A=0.205523
Allele Frequency Aggregator	African	Sub	11686	G=0.94737	A=0.05263
Allele Frequency Aggregator	Other	Sub	9732	G=0.8235	A=0.1765
Allele Frequency Aggregator	Latin American 2	Sub	5314	G=0.8504	A=0.1496
Allele Frequency Aggregator	South Asian	Sub	5232	G=0.7563	A=0.2437
Allele Frequency Aggregator	Asian	Sub	3988	G=0.8596	A=0.1404
Allele Frequency Aggregator	Latin American 1	Sub	1216	G=0.8355	A=0.1645
TopMed	Global	Study-wide	264690	G=0.855646	A=0.144354
Genographic Project	Global	Study-wide	205076	G=0.803195	A=0.196805
gnomAD - Genomes	Global	Study-wide	139892	G=0.846875	A=0.153125
gnomAD - Genomes	European	Sub	75772	G=0.80012	A=0.19988
gnomAD - Genomes	African	Sub	41956	G=0.94540	A=0.05460
gnomAD - Genomes	American	Sub	13604	G=0.84071	A=0.15929
gnomAD - Genomes	Ashkenazi Jewish	Sub	3318	G=0.6863	A=0.3137
gnomAD - Genomes	East Asian	Sub	3096	G=0.8634	A=0.1366
gnomAD - Genomes	Other	Sub	2146	G=0.8350	A=0.1650
The PAGE Study	Global	Study-wide	78696	G=0.88509	A=0.11491
The PAGE Study	AfricanAmerican	Sub	32510	G=0.94076	A=0.05924
The PAGE Study	Mexican	Sub	10810	G=0.87475	A=0.12525
The PAGE Study	Asian	Sub	8318	G=0.8183	A=0.1817
The PAGE Study	PuertoRican	Sub	7918	G=0.8674	A=0.1326
The PAGE Study	NativeHawaiian	Sub	4534	G=0.7980	A=0.2020
The PAGE Study	Cuban	Sub	4230	G=0.8031	A=0.1969
The PAGE Study	Dominican	Sub	3828	G=0.8634	A=0.1366
The PAGE Study	CentralAmerican	Sub	2450	G=0.8694	A=0.1306
The PAGE Study	SouthAmerican	Sub	1982	G=0.8754	A=0.1246
The PAGE Study	NativeAmerican	Sub	1260	G=0.8714	A=0.1286
The PAGE Study	SouthAsian	Sub	856	G=0.765	A=0.235
14KJPN	JAPANESE	Study-wide	28256	G=0.80054	A=0.19946
8.3KJPN	JAPANESE	Study-wide	16760	G=0.80251	A=0.19749
1000Genomes_30x	Global	Study-wide	6404	G=0.8554	A=0.1446
1000Genomes_30x	African	Sub	1786	G=0.9731	A=0.0269
1000Genomes_30x	Europe	Sub	1266	G=0.7875	A=0.2125
1000Genomes_30x	South Asian	Sub	1202	G=0.7246	A=0.2754
1000Genomes_30x	East Asian	Sub	1170	G=0.8650	A=0.1350
1000Genomes_30x	American	Sub	980	G=0.878	A=0.122
1000Genomes	Global	Study-wide	5008	G=0.8496	A=0.1504
1000Genomes	African	Sub	1322	G=0.9713	A=0.0287
1000Genomes	East Asian	Sub	1008	G=0.8611	A=0.1389
1000Genomes	Europe	Sub	1006	G=0.7763	A=0.2237
1000Genomes	South Asian	Sub	978	G=0.728	A=0.272
1000Genomes	American	Sub	694	G=0.879	A=0.121
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.8022	A=0.1978
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.8129	A=0.1871
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.8023	A=0.1977
KOREAN population from KRGDB	KOREAN	Study-wide	2930	G=0.8382	A=0.1618
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	G=0.8417	A=0.1583
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	G=0.862	A=0.138
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	G=0.780	A=0.220
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	G=0.763	A=0.237
HGDP-CEPH-db Supplement 1	Europe	Sub	320	G=0.778	A=0.222
HGDP-CEPH-db Supplement 1	Africa	Sub	242	G=0.992	A=0.008
HGDP-CEPH-db Supplement 1	America	Sub	216	G=0.917	A=0.083
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	G=1.00	A=0.00
HapMap	Global	Study-wide	1888	G=0.8951	A=0.1049
HapMap	American	Sub	768	G=0.868	A=0.132
HapMap	African	Sub	692	G=0.973	A=0.027
HapMap	Asian	Sub	254	G=0.850	A=0.150
HapMap	Europe	Sub	174	G=0.770	A=0.230
Korean Genome Project	KOREAN	Study-wide	1832	G=0.8433	A=0.1567
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.823	A=0.177
CNV burdens in cranial meningiomas	Global	Study-wide	792	G=0.866	A=0.134
CNV burdens in cranial meningiomas	CRM	Sub	792	G=0.866	A=0.134
Chileans	Chilean	Study-wide	626	G=0.864	A=0.136
Northern Sweden	ACPOP	Study-wide	600	G=0.773	A=0.227
Qatari	Global	Study-wide	216	G=0.806	A=0.194
A Vietnamese Genetic Variation Database	Global	Study-wide	214	G=0.846	A=0.154
SGDP_PRJ	Global	Study-wide	152	G=0.434	A=0.566
The Danish reference pan genome	Danish	Study-wide	40	G=0.80	A=0.20
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	18	G=0.78	A=0.22
Siberian	Global	Study-wide	14	G=0.50	A=0.50

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.53523555G>A
GRCh37.p13 chr 15	NC_000015.9:g.53815752G>A
WDR72 RefSeqGene	NG_017034.2:g.241108C>T

Gene: WDR72, WD repeat domain 72 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
WDR72 transcript variant 2	NM_001277176.2:c.107-233C… NM_001277176.2:c.107-233C>T	N/A	Intron Variant
WDR72 transcript variant 1	NM_182758.4:c.3149-233C>T	N/A	Intron Variant
WDR72 transcript variant 3	NR_102334.2:n.	N/A	Intron Variant
WDR72 transcript variant 4	NR_102335.2:n.	N/A	Intron Variant
WDR72 transcript variant 5	NR_102336.1:n.	N/A	Intron Variant
WDR72 transcript variant X5	XM_011521436.3:c.3131-233… XM_011521436.3:c.3131-233C>T	N/A	Intron Variant
WDR72 transcript variant X4	XM_017022061.2:c.3149-233… XM_017022061.2:c.3149-233C>T	N/A	Intron Variant
WDR72 transcript variant X1	XM_047432342.1:c.3149-233… XM_047432342.1:c.3149-233C>T	N/A	Intron Variant
WDR72 transcript variant X2	XM_047432343.1:c.3149-233… XM_047432343.1:c.3149-233C>T	N/A	Intron Variant
WDR72 transcript variant X3	XM_047432344.1:c.3149-233… XM_047432344.1:c.3149-233C>T	N/A	Intron Variant
WDR72 transcript variant X6	XM_047432345.1:c.3029-233… XM_047432345.1:c.3029-233C>T	N/A	Intron Variant

Gene: LOC105370826, uncharacterized LOC105370826 (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC105370826 transcript variant X1	XR_007064643.1:n.	N/A	Intron Variant
LOC105370826 transcript variant X2	XR_007064644.1:n.	N/A	Intron Variant
LOC105370826 transcript variant X3	XR_007064645.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: A (allele ID: 1214639 )

ClinVar Accession	Disease Names	Clinical Significance
RCV001613632.3	not provided	Benign

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 15	NC_000015.10:g.53523555=	NC_000015.10:g.53523555G>A
GRCh37.p13 chr 15	NC_000015.9:g.53815752=	NC_000015.9:g.53815752G>A
WDR72 RefSeqGene	NG_017034.2:g.241108=	NG_017034.2:g.241108C>T
WDR72 transcript variant 2	NM_001277176.1:c.107-233=	NM_001277176.1:c.107-233C>T
WDR72 transcript variant 2	NM_001277176.2:c.107-233=	NM_001277176.2:c.107-233C>T
WDR72 transcript variant 1	NM_182758.3:c.3149-233=	NM_182758.3:c.3149-233C>T
WDR72 transcript variant 1	NM_182758.4:c.3149-233=	NM_182758.4:c.3149-233C>T
WDR72 transcript variant X5	XM_011521436.3:c.3131-233=	XM_011521436.3:c.3131-233C>T
WDR72 transcript variant X4	XM_017022061.2:c.3149-233=	XM_017022061.2:c.3149-233C>T
WDR72 transcript variant X1	XM_047432342.1:c.3149-233=	XM_047432342.1:c.3149-233C>T
WDR72 transcript variant X2	XM_047432343.1:c.3149-233=	XM_047432343.1:c.3149-233C>T
WDR72 transcript variant X3	XM_047432344.1:c.3149-233=	XM_047432344.1:c.3149-233C>T
WDR72 transcript variant X6	XM_047432345.1:c.3029-233=	XM_047432345.1:c.3029-233C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

122 SubSNP, 26 Frequency, 1 ClinVar submissions

No	Submitter	Submission ID	Date (Build)
1	PERLEGEN	ss14920730	Dec 05, 2003 (119)
2	CSHL-HAPMAP	ss17534503	Feb 27, 2004 (120)
3	SSAHASNP	ss21253489	Apr 05, 2004 (121)
4	PERLEGEN	ss24670443	Sep 20, 2004 (123)
5	ABI	ss43715660	Mar 13, 2006 (126)
6	AFFY	ss65938445	Dec 01, 2006 (127)
7	AFFY	ss66270799	Dec 01, 2006 (127)
8	ILLUMINA	ss66731070	Dec 01, 2006 (127)
9	ILLUMINA	ss66895079	Dec 01, 2006 (127)
10	ILLUMINA	ss67003470	Dec 01, 2006 (127)
11	ILLUMINA	ss70375849	May 18, 2007 (127)
12	ILLUMINA	ss70491113	May 23, 2008 (130)
13	ILLUMINA	ss71015685	May 18, 2007 (127)
14	ILLUMINA	ss75695288	Dec 07, 2007 (129)
15	AFFY	ss76415513	Dec 08, 2007 (130)
16	KRIBB_YJKIM	ss84979525	Dec 14, 2007 (130)
17	ILLUMINA	ss121365794	Dec 01, 2009 (131)
18	ILLUMINA	ss152788673	Dec 01, 2009 (131)
19	ILLUMINA	ss159135910	Dec 01, 2009 (131)
20	ILLUMINA	ss159909019	Dec 01, 2009 (131)
21	ENSEMBL	ss161720839	Dec 01, 2009 (131)
22	ILLUMINA	ss169551537	Jul 04, 2010 (132)
23	ILLUMINA	ss170352332	Jul 04, 2010 (132)
24	COMPLETE_GENOMICS	ss171110284	Jul 04, 2010 (132)
25	AFFY	ss173514466	Jul 04, 2010 (132)
26	1000GENOMES	ss211610400	Jul 14, 2010 (132)
27	1000GENOMES	ss226897355	Jul 14, 2010 (132)
28	1000GENOMES	ss236781345	Jul 15, 2010 (132)
29	1000GENOMES	ss243168225	Jul 15, 2010 (132)
30	BL	ss254988026	May 09, 2011 (134)
31	GMI	ss282259442	May 04, 2012 (137)
32	ILLUMINA	ss479314201	May 04, 2012 (137)
33	ILLUMINA	ss479317384	May 04, 2012 (137)
34	ILLUMINA	ss479701975	Sep 08, 2015 (146)
35	ILLUMINA	ss484457410	May 04, 2012 (137)
36	ILLUMINA	ss536622611	Sep 08, 2015 (146)
37	SSMP	ss660211536	Apr 25, 2013 (138)
38	ILLUMINA	ss778736487	Sep 08, 2015 (146)
39	ILLUMINA	ss782675263	Sep 08, 2015 (146)
40	ILLUMINA	ss783643925	Sep 08, 2015 (146)
41	ILLUMINA	ss825345460	Apr 01, 2015 (144)
42	ILLUMINA	ss831925988	Sep 08, 2015 (146)
43	ILLUMINA	ss832648575	Jul 13, 2019 (153)
44	ILLUMINA	ss834196030	Sep 08, 2015 (146)
45	EVA-GONL	ss991796837	Aug 21, 2014 (142)
46	JMKIDD_LAB	ss1080133143	Aug 21, 2014 (142)
47	1000GENOMES	ss1353507235	Aug 21, 2014 (142)
48	DDI	ss1427629101	Apr 01, 2015 (144)
49	EVA_GENOME_DK	ss1577620771	Apr 01, 2015 (144)
50	EVA_UK10K_ALSPAC	ss1633019410	Apr 01, 2015 (144)
51	EVA_UK10K_TWINSUK	ss1676013443	Apr 01, 2015 (144)
52	EVA_DECODE	ss1695814958	Apr 01, 2015 (144)
53	EVA_SVP	ss1713490698	Apr 01, 2015 (144)
54	ILLUMINA	ss1752163682	Sep 08, 2015 (146)
55	WEILL_CORNELL_DGM	ss1935201010	Feb 12, 2016 (147)
56	ILLUMINA	ss1946394173	Feb 12, 2016 (147)
57	ILLUMINA	ss1959613663	Feb 12, 2016 (147)
58	JJLAB	ss2028379704	Sep 14, 2016 (149)
59	USC_VALOUEV	ss2156782884	Dec 20, 2016 (150)
60	HUMAN_LONGEVITY	ss2206866967	Dec 20, 2016 (150)
61	SYSTEMSBIOZJU	ss2628683991	Nov 08, 2017 (151)
62	ILLUMINA	ss2633229961	Nov 08, 2017 (151)
63	GRF	ss2701253416	Nov 08, 2017 (151)
64	ILLUMINA	ss2710817014	Nov 08, 2017 (151)
65	GNOMAD	ss2935032206	Nov 08, 2017 (151)
66	SWEGEN	ss3013299968	Nov 08, 2017 (151)
67	ILLUMINA	ss3021634094	Nov 08, 2017 (151)
68	BIOINF_KMB_FNS_UNIBA	ss3028013084	Nov 08, 2017 (151)
69	CSHL	ss3351119399	Nov 08, 2017 (151)
70	ILLUMINA	ss3625673552	Oct 12, 2018 (152)
71	ILLUMINA	ss3627363260	Oct 12, 2018 (152)
72	ILLUMINA	ss3631222865	Oct 12, 2018 (152)
73	ILLUMINA	ss3633802292	Oct 12, 2018 (152)
74	ILLUMINA	ss3634607250	Oct 12, 2018 (152)
75	ILLUMINA	ss3635491199	Oct 12, 2018 (152)
76	ILLUMINA	ss3636297109	Oct 12, 2018 (152)
77	ILLUMINA	ss3637242474	Oct 12, 2018 (152)
78	ILLUMINA	ss3638086298	Oct 12, 2018 (152)
79	ILLUMINA	ss3639056115	Oct 12, 2018 (152)
80	ILLUMINA	ss3639533376	Oct 12, 2018 (152)
81	ILLUMINA	ss3640314571	Oct 12, 2018 (152)
82	ILLUMINA	ss3641060562	Oct 12, 2018 (152)
83	ILLUMINA	ss3641355928	Oct 12, 2018 (152)
84	ILLUMINA	ss3643070520	Oct 12, 2018 (152)
85	ILLUMINA	ss3644647273	Oct 12, 2018 (152)
86	ILLUMINA	ss3652034838	Oct 12, 2018 (152)
87	EGCUT_WGS	ss3680442213	Jul 13, 2019 (153)
88	EVA_DECODE	ss3697912739	Jul 13, 2019 (153)
89	ILLUMINA	ss3725500603	Jul 13, 2019 (153)
90	ACPOP	ss3740932426	Jul 13, 2019 (153)
91	ILLUMINA	ss3744131239	Jul 13, 2019 (153)
92	ILLUMINA	ss3744907781	Jul 13, 2019 (153)
93	EVA	ss3753098957	Jul 13, 2019 (153)
94	PAGE_CC	ss3771830762	Jul 13, 2019 (153)
95	ILLUMINA	ss3772406433	Jul 13, 2019 (153)
96	KHV_HUMAN_GENOMES	ss3818415267	Jul 13, 2019 (153)
97	EVA	ss3834238522	Apr 27, 2020 (154)
98	HGDP	ss3847523860	Apr 27, 2020 (154)
99	SGDP_PRJ	ss3882939011	Apr 27, 2020 (154)
100	KRGDB	ss3932109429	Apr 27, 2020 (154)
101	KOGIC	ss3976165259	Apr 27, 2020 (154)
102	EVA	ss3984701494	Apr 26, 2021 (155)
103	EVA	ss3985717233	Apr 26, 2021 (155)
104	EVA	ss4017702406	Apr 26, 2021 (155)
105	TOPMED	ss4991780242	Apr 26, 2021 (155)
106	TOMMO_GENOMICS	ss5216247738	Apr 26, 2021 (155)
107	1000G_HIGH_COVERAGE	ss5298480088	Oct 16, 2022 (156)
108	GENOGRAPHIC	ss5314564680	Oct 16, 2022 (156)
109	EVA	ss5315784479	Oct 16, 2022 (156)
110	HUGCELL_USP	ss5492203765	Oct 16, 2022 (156)
111	EVA	ss5511433661	Oct 16, 2022 (156)
112	1000G_HIGH_COVERAGE	ss5599903287	Oct 16, 2022 (156)
113	SANFORD_IMAGENETICS	ss5657531146	Oct 16, 2022 (156)
114	TOMMO_GENOMICS	ss5770068952	Oct 16, 2022 (156)
115	EVA	ss5799938022	Oct 16, 2022 (156)
116	YY_MCH	ss5815344016	Oct 16, 2022 (156)
117	EVA	ss5828214970	Oct 16, 2022 (156)
118	EVA	ss5847743676	Oct 16, 2022 (156)
119	EVA	ss5851296921	Oct 16, 2022 (156)
120	EVA	ss5875920462	Oct 16, 2022 (156)
121	EVA	ss5948933298	Oct 16, 2022 (156)
122	EVA	ss5980870037	Oct 16, 2022 (156)
123	1000Genomes	NC_000015.9 - 53815752	Oct 12, 2018 (152)
124	1000Genomes_30x	NC_000015.10 - 53523555	Oct 16, 2022 (156)
125	The Avon Longitudinal Study of Parents and Children	NC_000015.9 - 53815752	Oct 12, 2018 (152)
126	Chileans	NC_000015.9 - 53815752	Apr 27, 2020 (154)
127	Genetic variation in the Estonian population	NC_000015.9 - 53815752	Oct 12, 2018 (152)
128	Genographic Project	NC_000015.10 - 53523555	Oct 16, 2022 (156)
129	The Danish reference pan genome	NC_000015.9 - 53815752	Apr 27, 2020 (154)
130	gnomAD - Genomes	NC_000015.10 - 53523555	Apr 26, 2021 (155)
131	Genome of the Netherlands Release 5	NC_000015.9 - 53815752	Apr 27, 2020 (154)
132	HGDP-CEPH-db Supplement 1	NC_000015.8 - 51603044	Apr 27, 2020 (154)
133	HapMap	NC_000015.10 - 53523555	Apr 27, 2020 (154)
134	KOREAN population from KRGDB	NC_000015.9 - 53815752	Apr 27, 2020 (154)
135	Korean Genome Project	NC_000015.10 - 53523555	Apr 27, 2020 (154)
136	Northern Sweden	NC_000015.9 - 53815752	Jul 13, 2019 (153)
137	The PAGE Study	NC_000015.10 - 53523555	Jul 13, 2019 (153)
138	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000015.9 - 53815752	Apr 26, 2021 (155)
139	CNV burdens in cranial meningiomas	NC_000015.9 - 53815752	Apr 26, 2021 (155)
140	Qatari	NC_000015.9 - 53815752	Apr 27, 2020 (154)
141	SGDP_PRJ	NC_000015.9 - 53815752	Apr 27, 2020 (154)
142	Siberian	NC_000015.9 - 53815752	Apr 27, 2020 (154)
143	8.3KJPN	NC_000015.9 - 53815752	Apr 26, 2021 (155)
144	14KJPN	NC_000015.10 - 53523555	Oct 16, 2022 (156)
145	TopMed	NC_000015.10 - 53523555	Apr 26, 2021 (155)
146	UK 10K study - Twins	NC_000015.9 - 53815752	Oct 12, 2018 (152)
147	A Vietnamese Genetic Variation Database	NC_000015.9 - 53815752	Jul 13, 2019 (153)
148	ALFA	NC_000015.10 - 53523555	Apr 26, 2021 (155)
149	ClinVar	RCV001613632.3	Oct 16, 2022 (156)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs17548838	Oct 08, 2004 (123)
rs56512962	May 23, 2008 (130)
rs56809486	May 23, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
201752, ss66270799, ss76415513, ss171110284, ss173514466, ss211610400, ss254988026, ss282259442, ss479314201, ss825345460, ss1695814958, ss1713490698, ss3639056115, ss3639533376, ss3643070520, ss3847523860	NC_000015.8:51603043:G:A	NC_000015.10:53523554:G:A	(self)
66580889, 36960302, 153047, 26180461, 3860141, 16504955, 39286823, 14217291, 943160, 251016, 17242940, 34955991, 9299238, 74217045, 36960302, 8223120, ss226897355, ss236781345, ss243168225, ss479317384, ss479701975, ss484457410, ss536622611, ss660211536, ss778736487, ss782675263, ss783643925, ss831925988, ss832648575, ss834196030, ss991796837, ss1080133143, ss1353507235, ss1427629101, ss1577620771, ss1633019410, ss1676013443, ss1752163682, ss1935201010, ss1946394173, ss1959613663, ss2028379704, ss2156782884, ss2628683991, ss2633229961, ss2701253416, ss2710817014, ss2935032206, ss3013299968, ss3021634094, ss3351119399, ss3625673552, ss3627363260, ss3631222865, ss3633802292, ss3634607250, ss3635491199, ss3636297109, ss3637242474, ss3638086298, ss3640314571, ss3641060562, ss3641355928, ss3644647273, ss3652034838, ss3680442213, ss3740932426, ss3744131239, ss3744907781, ss3753098957, ss3772406433, ss3834238522, ss3882939011, ss3932109429, ss3984701494, ss3985717233, ss4017702406, ss5216247738, ss5315784479, ss5511433661, ss5657531146, ss5799938022, ss5828214970, ss5847743676, ss5948933298, ss5980870037	NC_000015.9:53815751:G:A	NC_000015.10:53523554:G:A	(self)
RCV001613632.3, 87429222, 78571, 469398162, 1265607, 32543260, 1052231, 103906056, 207325902, 80512905, ss2206866967, ss3028013084, ss3697912739, ss3725500603, ss3771830762, ss3818415267, ss3976165259, ss4991780242, ss5298480088, ss5314564680, ss5492203765, ss5599903287, ss5770068952, ss5815344016, ss5851296921, ss5875920462	NC_000015.10:53523554:G:A	NC_000015.10:53523554:G:A	(self)
ss17534503, ss21253489	NT_010194.16:24606308:G:A	NC_000015.10:53523554:G:A	(self)
ss14920730, ss24670443, ss43715660, ss65938445, ss66731070, ss66895079, ss67003470, ss70375849, ss70491113, ss71015685, ss75695288, ss84979525, ss121365794, ss152788673, ss159135910, ss159909019, ss161720839, ss169551537, ss170352332	NT_010194.17:24606308:G:A	NC_000015.10:53523554:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10518725

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10518725